Spg017562 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017562
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CASP-like protein
Location	scaffold4: 42503286 .. 42506141 (+)
RNA-Seq Expression	Spg017562
Synteny	Spg017562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCGTGTGTTTTGGCCAACCAGCTATCATAAATATATGCAGCTGCCGCAAACACCCGACCGACTTCTGATTTATTTTGGATATTCTCACTTCTCATCACTGCTTTTTCCACAACAAGAGAAAGCCAATGGGGTTTTGGGATCTAAGAACTGAAGGGCTCCTCAGATTCTCTGCGATTATTGCCTTGCTTTTGACAGTTCTTCTGCTCGCTTTTGATAAGCAAACTACCCAAATCTTTCATGTTGACAAGAAAGCCTCTTTCAGAAGTTTGCGTGCTCTCATGTAAGCCCCCCTCCCCTCTCTCTCTCGAGTCGAGTCTCCCCCGAGTTTTTCTTTTCGAAGTTTTGAATAGAGAGATTCGAACATTTAACCTTAAATATGTAGATTGGTTGAGTCAGAATTTTCAACGCTCTTTCTGGGTGGAGAAAAAAGAAAAGAGGGAAAGATTCACTTTAGTTTAAAAAAAAAAAAATTGAAGTATTATTTCTAATTTGATTTGATCTCTTTAAAATTTATGATATGTTTATACAAAATTAGAAGGTAAATTTTTTACCTCCAAATATATAGTTTTTCTATAGTTCAATTGATCATCCGACTTTTAGGATAGATGTATGTTTGACTCAGTTGACCTAGGTTTAAGTTAGTGATTTTTAAATATATATACATATTTATCATTATTACTTTTTTTTTTTTTTTTTTTTACTTTTTTACTTCTTTTGGTGACAGAGTAATTATGTATGTGGACTCTATGGCAGCTGCCTACAACATTCTTCAACTCTGCAAATGTTGGATTTCAACTCAGCCAAAAGGAGCCTCCAAATTAGGGGCTGACTTTAATATATACCTATTTTGGATTTCTTTCTTTCTTGACCAGGTATGTCCTAATTTCTCTTTATATATTACCTTTTCTCTTATATTAGATTGAGAAATCTGTGTTTTGTAATTTATGTAATGACATATTTGGAGGTGATTTTATAATGTCAAAATCACTCCCAAACATGATAAAAGCGATTTTGGTCATTCCAAAATCACTCCTAAACACATGTCCTAAGTCCTAAATGAATTGAAATTTTTGATATTTCAATATGCATAACCTTTATTTGGTTAAAAAAATATTTAATCATGGATTAACTCAATAATAATAATTTGTCCAGTTTTAACTTTTTACCGTATTATTTGATGAATCATATATTGGCTTAGATATTGATCAGGAGGATTATTATAGCCACCACTAGTTGACTTGTGTTATACTTTATAAATAAATAAATAAATATATACAGTTGTTAATTATTTTTATGATATTTATGTTGAGTCATTTTATTTATACCAAAATAAAAAAAATTAAAAAAAATAATGAAAAAATCAAGAAAAATAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTGGTGAAAAGAAGAAAAATAATGCTTCTAATAGTTTTAGTTTCCCTGAGCAAGAGGGAGTAAATGGAGTTGCCCGACCTGTGGTTATGGAGGAAAAGGACACTGACAAGTGCACCATCACAAGAAACCAGCTCGTGTAATTAGCCAAAAATTCCGAAAGTTCTAGGTTGGGTTTAGAGATTTTTTTTTTTTTTTTAAATAATGGTTTAGAGATTTTTTTTTAAAGAACCAAATCCAAAATAAAATTATAAATTTGTGGCAAAATATATATGTTTTAGTGGTTTTCTTTCTCTTTTTTTTCATTTATTTAAAAAGTTTCAATATCTTTCTTTACATTTTAATATTTTTACGGATAGAAAGATTATACGGAGTCTATTGATATTTTATCAGTGTCTATCACTCATAGTCACTGATAGACTTCGATTAATCGAAGTCTATCAAATGATAGACATTAATAGAGTCTAATTATCAGAATCTATCAATGATAAATACTGATAGAAGGATTATACAGAGTCTATCAGCATGATATTTTATCAGTGTCTATCACCGACAGTCACTGATAGACTTTGAATCGTGATTATTAAAATCTATCAAGTGATATACACTGATAGAAAGGAATGTACGAAAATTGGTAGAATTCGCGTACAATTCAAAATTAAATAGGGGTAAAACGGGAATTATGAAATTTTATTCTAATAAATTCCCATATTTTCTATTATTTTTACATTGTGTTCTATTTGGAATTTAAAAAAACCCTAATTGCCACCTCATGCAATTTCCCTATATTTGTTTTCTCAATTAAATTATATATTTTTAAATACTTGAACTTTGTTTCAAAAAAAAAAAAGAGCAAATTGCAAAAACCACCCCTGAAGTATGATGTTTGTAACAATTACATCCTTAAAGTTTCAATTGTAAAAATTAAACCCTCCAACTTTTAAAAGTGTAAAAATTAGAACCTTAAACTTTTGAATGCTAAAATTAAACCCCAACCTATCATAAATGTAAAAATTGGGTCCATCTCTTATTTCTCCTTCTCTCTCCTCTTTCATCTCTCTTCTTTCTCCACCTCTTCATTCTTCCCATCACCCACTCTCTCTCTACTTTCTCCCTCTACCTCTCCATCCTTTCTTCTCTTTCTAAAGACGGGTGATTTTGGGGTTCCTCTTTGTGGGTATAGTTGCAGAGCTTTACCATCTGCTATGGCGGAAGAAAAAGAGAATCAACATTACAGAGGTGTTGAAGACGATGAATATAACAAAAGGGCCACTTCATTTGATTCCTTCTGAAACCAACACCACTCGCGAAATTATCAGAAACCCACTTGAGGACTGCCATGGATTGGACCTCGAGCTCGGCTACAGTGAAGATTTGTTGTTGAAGACGGTCGAGGAAAACGACGAAGATGAGGTAGAGGATTTGGAGCTGATGGGGATTTACAATCTCGCAGGGTAG

mRNA sequence

ATGGGGTTTTGGGATCTAAGAACTGAAGGGCTCCTCAGATTCTCTGCGATTATTGCCTTGCTTTTGACAGTTCTTCTGCTCGCTTTTGATAAGCAAACTACCCAAATCTTTCATGTTGACAAGAAAGCCTCTTTCAGAAGTTTGCGTGCTCTCATAGTAATTATGTATGTGGACTCTATGGCAGCTGCCTACAACATTCTTCAACTCTGCAAATGTTGGATTTCAACTCAGCCAAAAGGAGCCTCCAAATTAGGGGCTGACTTTAATATATACCTATTTTGGATTTCTTTCTTTCTTGACCAGAAAAAGAGAATCAACATTACAGAGGTGTTGAAGACGATGAATATAACAAAAGGGCCACTTCATTTGATTCCTTCTGAAACCAACACCACTCGCGAAATTATCAGAAACCCACTTGAGGACTGCCATGGATTGGACCTCGAGCTCGGCTACAGTGAAGATTTGTTGTTGAAGACGGTCGAGGAAAACGACGAAGATGAGGTAGAGGATTTGGAGCTGATGGGGATTTACAATCTCGCAGGGTAG

Coding sequence (CDS)

ATGGGGTTTTGGGATCTAAGAACTGAAGGGCTCCTCAGATTCTCTGCGATTATTGCCTTGCTTTTGACAGTTCTTCTGCTCGCTTTTGATAAGCAAACTACCCAAATCTTTCATGTTGACAAGAAAGCCTCTTTCAGAAGTTTGCGTGCTCTCATAGTAATTATGTATGTGGACTCTATGGCAGCTGCCTACAACATTCTTCAACTCTGCAAATGTTGGATTTCAACTCAGCCAAAAGGAGCCTCCAAATTAGGGGCTGACTTTAATATATACCTATTTTGGATTTCTTTCTTTCTTGACCAGAAAAAGAGAATCAACATTACAGAGGTGTTGAAGACGATGAATATAACAAAAGGGCCACTTCATTTGATTCCTTCTGAAACCAACACCACTCGCGAAATTATCAGAAACCCACTTGAGGACTGCCATGGATTGGACCTCGAGCTCGGCTACAGTGAAGATTTGTTGTTGAAGACGGTCGAGGAAAACGACGAAGATGAGGTAGAGGATTTGGAGCTGATGGGGATTTACAATCTCGCAGGGTAG

Protein sequence

MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQKKRINITEVLKTMNITKGPLHLIPSETNTTREIIRNPLEDCHGLDLELGYSEDLLLKTVEENDEDEVEDLELMGIYNLAG

Homology

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BLAST of Spg017562 vs. NCBI nr
Match: XP_004149074.1 (CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021217 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 8.7e-37
Identity = 78/101 (77.23%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGF D++TEG+LRF AII L+L+VLLL FDK+T QIFHVDKKASF+SLRAL++I+YVDSM
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           AA YNILQLCKCWI  QPKG SKLG  F+IYLFW+SFFLDQ
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQ 101

[Close]

BLAST of Spg017562 vs. NCBI nr
Match: XP_023537147.1 (CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like protein 2C1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021022.1 CASP-like protein 2C1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-36
Identity = 79/101 (78.22%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGFWD RTEG+LR  AII L+LTVLLL FDKQTTQIFH+DKKASFRSL A +VIMYVDS+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           AAAYNILQ+CKCWIS QPKG SKLG+  +I LFW SF LDQ
Sbjct: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQ 101

[Close]

BLAST of Spg017562 vs. NCBI nr
Match: XP_038889630.1 (CASP-like protein 2C1 [Benincasa hispida])

HSP 1 Score: 161.8 bits (408), Expect = 5.6e-36
Identity = 76/101 (75.25%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGF ++RTEG+LRF AI  L+L+V LL FDKQTTQIFH+DKKASFRSLRAL++I+YVDSM
Sbjct: 1   MGFGNVRTEGILRFCAIFLLVLSVCLLGFDKQTTQIFHIDKKASFRSLRALVIIIYVDSM 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
            A YNILQ+CKCWI  QPKG SKLG  F+IYLFW+SFFLDQ
Sbjct: 61  VAGYNILQICKCWIFAQPKGISKLGGHFDIYLFWLSFFLDQ 101

[Close]

BLAST of Spg017562 vs. NCBI nr
Match: XP_022153293.1 (CASP-like protein 2C1 [Momordica charantia])

HSP 1 Score: 161.0 bits (406), Expect = 9.6e-36
Identity = 82/103 (79.61%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MGFW-DLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDS 60
           MGF+ D RTEG+LRF AII L+LTV LL FDKQTTQIFHVDKKA+FRSLR+LIVIMYV+S
Sbjct: 1   MGFFGDPRTEGILRFCAIIGLILTVCLLGFDKQTTQIFHVDKKATFRSLRSLIVIMYVNS 60

Query: 61  MAAAYNILQLCKCWISTQPK-GASKLGADFNIYLFWISFFLDQ 102
           +AA YN+LQLCKCWIS QPK GASKLGA ++IY+FWISFFLDQ
Sbjct: 61  VAAGYNLLQLCKCWISAQPKLGASKLGAHYDIYIFWISFFLDQ 103

[Close]

BLAST of Spg017562 vs. NCBI nr
Match: XP_022938059.1 (CASP-like protein 2C1 [Cucurbita moschata])

HSP 1 Score: 161.0 bits (406), Expect = 9.6e-36
Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGFWD RTEG+LR  AII L+LTVLLL FDKQTTQIFH+DKKASFRSL A +VIMYVDS+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           AAAYNILQ+CKCWIS  PKG SKLG+  +I LFW SF LDQ
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQ 101

[Close]

BLAST of Spg017562 vs. ExPASy Swiss-Prot
Match: Q5K4H9 (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.8e-16
Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNI 66
           + E L+R S I+ L+LT  L+  D QT  IF+V KKASF+ LRAL+ ++Y+ S+AAAYN+
Sbjct: 7   KIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYNL 66

Query: 67  LQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           LQLC    S   KG S        YL W+ + LDQ
Sbjct: 67  LQLCCSSFSASYKGTS---LQSYAYLAWLRYILDQ 98

[Close]

BLAST of Spg017562 vs. ExPASy Swiss-Prot
Match: A7Q6G6 (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.0e-13
Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKK-ASFRSLRALIVIMYVDSMAAAYN 66
           R E  LR  AI+ L+LT  LL FD QT  +F   KK A+FR L AL V++YVDS+AA YN
Sbjct: 30  RAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVAAGYN 89

Query: 67  ILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           +LQL + +IS + KG  KL     + L W+ F LDQ
Sbjct: 90  LLQLGRGFISAKLKG--KLINVSYVTLPWVCFLLDQ 123

[Close]

BLAST of Spg017562 vs. ExPASy Swiss-Prot
Match: B9IM09 (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNI 66
           + E +LR  AI+ L+ T  L+  D QT  +   +K+ +++ L AL+V++YVD++AAAYN+
Sbjct: 7   KIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNL 66

Query: 67  LQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           LQLC+C +S   KG  K       YL W  F LDQ
Sbjct: 67  LQLCRCSVSALSKGNFK---GSYRYLSWACFVLDQ 98

[Close]

BLAST of Spg017562 vs. ExPASy Swiss-Prot
Match: C6SZ04 (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 7   RTEGLLRFSAIIALLLTVLLLAFDKQTTQIF-HVDKKASFRSLRALIVIMYVDSMAAAYN 66
           R E  LR SAI+ L+LT  L+A D QT  +F  ++KKA+++ L AL +++YV   AA YN
Sbjct: 7   RGEVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYN 66

Query: 67  ILQLCK--CWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           +L LCK   W     KG+        + + WI F LDQ
Sbjct: 67  LLLLCKHSIWSRKNFKGS-------YLCMAWICFSLDQ 97

[Close]

BLAST of Spg017562 vs. ExPASy Swiss-Prot
Match: Q8L8U9 (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-08
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 8   TEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNIL 67
           TE +LR   +  LLLT  L+  D QT +I ++ K  SFR L AL   +Y+D + AAYN++
Sbjct: 7   TEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLV 66

Query: 68  QLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           QL   W + + K ++           W S+ LDQ
Sbjct: 67  QLGLGWYNVEQKTSNPK---------WFSYLLDQ 91

[Close]

BLAST of Spg017562 vs. ExPASy TrEMBL
Match: A0A0A0LK62 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.2e-37
Identity = 78/101 (77.23%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGF D++TEG+LRF AII L+L+VLLL FDK+T QIFHVDKKASF+SLRAL++I+YVDSM
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           AA YNILQLCKCWI  QPKG SKLG  F+IYLFW+SFFLDQ
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQ 101

[Close]

BLAST of Spg017562 vs. ExPASy TrEMBL
Match: A0A6J1DH36 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 4.7e-36
Identity = 82/103 (79.61%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MGFW-DLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDS 60
           MGF+ D RTEG+LRF AII L+LTV LL FDKQTTQIFHVDKKA+FRSLR+LIVIMYV+S
Sbjct: 1   MGFFGDPRTEGILRFCAIIGLILTVCLLGFDKQTTQIFHVDKKATFRSLRSLIVIMYVNS 60

Query: 61  MAAAYNILQLCKCWISTQPK-GASKLGADFNIYLFWISFFLDQ 102
           +AA YN+LQLCKCWIS QPK GASKLGA ++IY+FWISFFLDQ
Sbjct: 61  VAAGYNLLQLCKCWISAQPKLGASKLGAHYDIYIFWISFFLDQ 103

[Close]

BLAST of Spg017562 vs. ExPASy TrEMBL
Match: A0A6J1FCZ2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 4.7e-36
Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGFWD RTEG+LR  AII L+LTVLLL FDKQTTQIFH+DKKASFRSL A +VIMYVDS+
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           AAAYNILQ+CKCWIS  PKG SKLG+  +I LFW SF LDQ
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQ 101

[Close]

BLAST of Spg017562 vs. ExPASy TrEMBL
Match: A0A6J1HQ91 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.0e-35
Identity = 77/101 (76.24%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGFWD +TEG+LR  AII L+LTVLLL FDKQTTQIFH+DKKASFRSL A +VIMYVDS+
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           AAAYNILQ+C CWIS QPKG SKLG+  +I LFW SF LDQ
Sbjct: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQ 101

[Close]

BLAST of Spg017562 vs. ExPASy TrEMBL
Match: A0A6J1ET65 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436264 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 68/101 (67.33%), Postives = 79/101 (78.22%), Query Frame = 0


Query: 1   MGFWDLRTEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSM 60
           MGF D RTE +LR  AII L+LTV L+ FDK+TTQIF VDK ASFRSL AL VIM+VDS+
Sbjct: 1   MGFGDARTEWILRLCAIICLVLTVFLMGFDKETTQIFGVDKTASFRSLGALKVIMFVDSI 60

Query: 61  AAAYNILQLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           AAAYNILQL KCWIS  PK   +L   F++ LFW+SFF+DQ
Sbjct: 61  AAAYNILQLAKCWISAHPKPPFQLQTHFHLPLFWLSFFIDQ 101

[Close]

BLAST of Spg017562 vs. TAIR 10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 8   TEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNIL 67
           TE +LR   +  LLLT  L+  D QT +I ++ K  SFR L AL   +Y+D + AAYN++
Sbjct: 7   TEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLV 66

Query: 68  QLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           QL   W + + K ++           W S+ LDQ
Sbjct: 67  QLGLGWYNVEQKTSNPK---------WFSYLLDQ 91

[Close]

BLAST of Spg017562 vs. TAIR 10
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 54.7 bits (130), Expect = 9.1e-08
Identity = 32/94 (34.04%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 8   TEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNIL 67
           TE +LR    +  L+  +L+A D Q  +IF + KKA F  ++AL++++ V+ +AA Y+++
Sbjct: 30  TELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLV 89

Query: 68  QLCKCWISTQPKGASKLGADFNIYLFWISFFLDQ 102
           Q  +C +     G  K    F+  L W  FF DQ
Sbjct: 90  QAVRCVV-----GLMKGRVLFSKPLAWAIFFGDQ 118

[Close]

BLAST of Spg017562 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 45.1 bits (105), Expect = 7.2e-05
Identity = 31/107 (28.97%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 8   TEGLLRFSAIIALLLTVLLLAFDKQTTQIFHVDKKASFRSLRALIVIMYVDSMAAAYNIL 67
           TE LLR S  +  LL ++L+  D +   IF + K A +  ++A++ ++  + +AA Y++L
Sbjct: 11  TELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLL 70

Query: 68  QLCKCWISTQPKGASKLGADFNIYLFWISFFLDQKKR-INITEVLKT 114
           Q  +C +     G  K    F+  L W  F  DQ    +N+  +  T
Sbjct: 71  QSVRCVV-----GTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAAT 112

The following BLAST results are available for this feature:

BLAST of Spg017562 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149074.1	8.7e-37	77.23	CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_021...	[more]
XP_023537147.1	2.5e-36	78.22	CASP-like protein 2C1 [Cucurbita pepo subsp. pepo] >KAG6586191.1 CASP-like prote...	[more]
XP_038889630.1	5.6e-36	75.25	CASP-like protein 2C1 [Benincasa hispida]	[more]
XP_022153293.1	9.6e-36	79.61	CASP-like protein 2C1 [Momordica charantia]	[more]
XP_022938059.1	9.6e-36	77.23	CASP-like protein 2C1 [Cucurbita moschata]	[more]

BLAST of Spg017562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5K4H9	8.8e-16	47.37	CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1	[more]
A7Q6G6	7.0e-13	50.00	CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1	[more]
B9IM09	9.1e-13	42.11	CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 S...	[more]
C6SZ04	1.6e-09	41.84	CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q8L8U9	2.3e-08	37.23	CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1	[more]

BLAST of Spg017562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK62	4.2e-37	77.23	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1	[more]
A0A6J1DH36	4.7e-36	79.61	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020824 PE=3 SV=1	[more]
A0A6J1FCZ2	4.7e-36	77.23	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444261 PE=3 SV=1	[more]
A0A6J1HQ91	1.0e-35	76.24	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111465689 PE=3 SV=1	[more]
A0A6J1ET65	1.4e-27	67.33	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436264 PE=3 SV=1	[more]

BLAST of Spg017562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25830.1	1.7e-09	37.23	Uncharacterised protein family (UPF0497)	[more]
AT2G35760.1	9.1e-08	34.04	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	7.2e-05	28.97	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 9..101 e-value: 1.3E-13 score: 51.0
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..102
None	No IPR available	PANTHER	PTHR11615:SF241	CASP-LIKE PROTEIN 2C1	coord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017562.1	Spg017562.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding