Spg017558 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017558
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	BEST Arabidopsis thaliana protein match is: s in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Location	scaffold4: 41556738 .. 41557486 (-)
RNA-Seq Expression	Spg017558
Synteny	Spg017558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAAAATTTCATTGGGATATGAAGAACAAAGTCATATCAAGAACCTCTTCAGTTGGTTATTCTTCTCGCAGTATTTACTATTGTGGAACAGTTGAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCACCCCCTCAGGAGTTGCTTCCACCTCTCAGCCCTCCGCCGGCAGTTCTCAGCCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAATCCGACCTCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGGAGAGTGAGAGAGTTGCCCAAGCAACAACTATTGACTATAGCAATGGAGATCCTTTTGGTCACTATGATAAGTTGGAAACTTCTTCATTTCTTAGCTCTGAATGCGAGTTCATGGCGTCTCCTCGAAATTCAATGTCGTCGTCGTCTTCTTCTTCTTCATCGCCATCATCTTTGCTTGAGTCGTTAACCGTACGAAATGTGGGGAGGGTGTCATTTGGAAGGCCTCCGTGTTGCAGTGCTTGGCAAATTAATCGAATTCTAACTTGTTACCATTGCTAGGGGATTTTAATATTTTAGTATCATTTTATGTTTGATATATATGATATCAAGTAATAAAGGTGAGAAGGGATATAAGAAGATTTAAGTTATTTAAGCAATTAAGCTCAATGTTAATGTTATTGTTGATGTTCATGTGAACTCTCTAGGATTTTGCCTTATGGGTTGGTGTTGCCTGA

mRNA sequence

ATGGATGGAAAATTTCATTGGGATATGAAGAACAAAGTCATATCAAGAACCTCTTCAGTTGGTTATTCTTCTCGCAGTATTTACTATTGTGGAACAGTTGAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCACCCCCTCAGGAGTTGCTTCCACCTCTCAGCCCTCCGCCGGCAGTTCTCAGCCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAATCCGACCTCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGGAGAGTGAGAGAGTTGCCCAAGCAACAACTATTGACTATAGCAATGGAGATCCTTTTGGTCACTATGATAAGTTGGAAACTTCTTCATTTCTTAGCTCTGAATGCGAGTTCATGGCGTCTCCTCGAAATTCAATGTCGTCGTCGTCTTCTTCTTCTTCATCGCCATCATCTTTGCTTGAGTCGTTAACCGATTTTGCCTTATGGGTTGGTGTTGCCTGA

Coding sequence (CDS)

ATGGATGGAAAATTTCATTGGGATATGAAGAACAAAGTCATATCAAGAACCTCTTCAGTTGGTTATTCTTCTCGCAGTATTTACTATTGTGGAACAGTTGAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCACCCCCTCAGGAGTTGCTTCCACCTCTCAGCCCTCCGCCGGCAGTTCTCAGCCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAATCCGACCTCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGGAGAGTGAGAGAGTTGCCCAAGCAACAACTATTGACTATAGCAATGGAGATCCTTTTGGTCACTATGATAAGTTGGAAACTTCTTCATTTCTTAGCTCTGAATGCGAGTTCATGGCGTCTCCTCGAAATTCAATGTCGTCGTCGTCTTCTTCTTCTTCATCGCCATCATCTTTGCTTGAGTCGTTAACCGATTTTGCCTTATGGGTTGGTGTTGCCTGA

Protein sequence

MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLSPPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHYDKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLTDFALWVGVA

Homology

[Close]

BLAST of Spg017558 vs. NCBI nr
Match: XP_022997465.1 (uncharacterized protein LOC111492375 [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-61
Identity = 131/163 (80.37%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLP PCIE+PK RPRP M+LRFWRR KKSR+  R AQATTIDYSNG      
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYSNG------ 120

Query: 121 DKLETSSFLSSECEFMASPRNSM--SSSSSSSSSPSSLLESLT 162
            KLET SFLSS+CEFMASPR+SM  SSSSSSSSSPSSL+ESLT
Sbjct: 121 -KLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLT 156

[Close]

BLAST of Spg017558 vs. NCBI nr
Match: KAG7020905.1 (hypothetical protein SDJN02_17593, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.4 bits (625), Expect = 3.6e-61
Identity = 131/165 (79.39%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MD  FHWD+KNKVISRTSS+G SSRSIYYCGT EGVPFKWETQPGTPKDPPPQ++LPPL+
Sbjct: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLPKPCIEQPK RPRP +RLRFWRRSKK+   +R A+A TIDYSN D FGH 
Sbjct: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKN--GKRDARARTIDYSNEDRFGHP 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSS----SSSSSPSSLLESLT 162
           DKLET SFLSS+CEFM S RNSMSSS     SSSSSPSS  ESLT
Sbjct: 121 DKLETFSFLSSDCEFMTSSRNSMSSSPSLSLSSSSSPSSFFESLT 163

[Close]

BLAST of Spg017558 vs. NCBI nr
Match: KAG6586081.1 (Transcription initiation factor TFIID subunit 4b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 130/165 (78.79%), Postives = 140/165 (84.85%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MD  FHWD+KNKVISRTSS+G SSRSIYYCGT EGVPFKWETQPGTPKDPPPQ++LPPL+
Sbjct: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLPKPCIEQPK RPRP +RLRFWRRSKK+   +R A+A TIDYSN D FGH 
Sbjct: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKN--GKRDARARTIDYSNEDRFGHP 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSS----SSSSSPSSLLESLT 162
           DKLET SFLSS+CEFM S RNSMS S     SSSSSPSS  ESLT
Sbjct: 121 DKLETFSFLSSDCEFMTSSRNSMSLSPSLSLSSSSSPSSFFESLT 163

[Close]

BLAST of Spg017558 vs. NCBI nr
Match: KAG7029810.1 (hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241.9 bits (616), Expect = 4.0e-60
Identity = 130/163 (79.75%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPR--MRLRFWRRSKKSRESERVAQATTIDYSNGDPFG 120
           PPPAV+SLGLP PCIE+PK RPRPR  M+LRFWRR KKSR+  R AQATTIDYSN     
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYSN----- 120

Query: 121 HYDKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLT 162
             DKLET SFLSS+CEFMASPR+SM SSSSSSSSPSSL+ESLT
Sbjct: 121 --DKLETFSFLSSDCEFMASPRDSM-SSSSSSSSPSSLIESLT 155

[Close]

BLAST of Spg017558 vs. NCBI nr
Match: XP_023546389.1 (uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 4.0e-60
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPF WETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFVWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAV+SLGLP PCIE+PK RPRP M+LRFWRR KKSR+  R AQATTIDYSN       
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYSN------- 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLT 162
           DKLET SFLSS+CEFMASPR+SM SSSSSSSSPSSL+ESLT
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM-SSSSSSSSPSSLIESLT 153

[Close]

BLAST of Spg017558 vs. ExPASy TrEMBL
Match: A0A6J1K9Q8 (uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.0e-61
Identity = 131/163 (80.37%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLP PCIE+PK RPRP M+LRFWRR KKSR+  R AQATTIDYSNG      
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYSNG------ 120

Query: 121 DKLETSSFLSSECEFMASPRNSM--SSSSSSSSSPSSLLESLT 162
            KLET SFLSS+CEFMASPR+SM  SSSSSSSSSPSSL+ESLT
Sbjct: 121 -KLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLT 156

[Close]

BLAST of Spg017558 vs. ExPASy TrEMBL
Match: A0A6J1ENL5 (uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC111436141 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.5e-60
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAV+SLGLP PCIE+PK RPRP M+L FWRR KKSR+  R AQATTIDYSN       
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYSN------- 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLT 162
           DKLET SFLSS+CEFMASPR+SM SSSSSSSSPSSL+ESLT
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM-SSSSSSSSPSSLIESLT 153

[Close]

BLAST of Spg017558 vs. ExPASy TrEMBL
Match: A0A6J1FCU1 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111444457 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.7e-60
Identity = 129/165 (78.18%), Postives = 140/165 (84.85%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MD  FHWD+KNKVISRTSS+G SSRSIYYCGT EGVPFKWETQPGTPKDPPPQ++LPPL+
Sbjct: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLPKPCIEQPK RPRP +RLRFWRRSKK+   +R A+A TIDYSN D FG+ 
Sbjct: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKN--GKRDARARTIDYSNEDRFGNP 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSS----SSSSSPSSLLESLT 162
           DKLET SFLSS+CEFM S RNSM SS     SSSSSPSS  ESLT
Sbjct: 121 DKLETFSFLSSDCEFMTSSRNSMLSSPSLSLSSSSSPSSFFESLT 163

[Close]

BLAST of Spg017558 vs. ExPASy TrEMBL
Match: A0A6J1DGF8 (uncharacterized protein LOC111020830 OS=Momordica charantia OX=3673 GN=LOC111020830 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.7e-57
Identity = 126/162 (77.78%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDGKFHWD K+KVISRTSSVG SSRSIYYCGT EGVPFKWETQPGTPKDPPPQE+LPPLS
Sbjct: 1   MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLPKPCIE+P  RPR RM LRFWR+S+K RE             NGD FGH 
Sbjct: 61  PPPAVLSLGLPKPCIERPNPRPRLRMSLRFWRKSEKKRE-------------NGDGFGHP 120

Query: 121 DKLETSSFLSSECEFMASPRNSMS--SSSSSSSSPSSLLESL 161
           DKLETSSF+SS+ EFMASPR+S+S  SSSSSSS PSSLLESL
Sbjct: 121 DKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSLPSSLLESL 149

[Close]

BLAST of Spg017558 vs. ExPASy TrEMBL
Match: A0A5D3BQA0 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00410 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.1e-50
Identity = 121/167 (72.46%), Postives = 136/167 (81.44%), Query Frame = 0


Query: 1   MDGK-FHWDMKNKVISRTSSVGYSSRSIYYCGTV-EGVPFKWETQPGTPKDPPPQELLPP 60
           M+G+ FHWDMKNKVISRTSS+G SS SIYY GT  +GVPFKWETQPGTPKDPPPQ+LLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGLPKP-CIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPF 120
           LSPPPAVLSLG+PKP CI+QPK R  PRMRLRFW++  KSR+  R AQ T ID+ N    
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDHYN---- 120

Query: 121 GHYDKLETSSFLSSECEFMA--SPRNSMSSS--SSSSSSPSSLLESL 161
              DKLET SFLSS+CEFMA  SPR+SMSSS  SSSSSSPSS ++SL
Sbjct: 121 ---DKLETFSFLSSDCEFMASPSPRDSMSSSSTSSSSSSPSSFIDSL 160

[Close]

BLAST of Spg017558 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-14
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 14  ISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLSPPPAVLSLGLPKP 73
           ISR SSVGY    +      EGVPF+WE QPGTP +  P+E++PPLSPPPA+LSLGLPKP
Sbjct: 12  ISRNSSVGYYDERM-----PEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74  --CIEQPKIRPRP-RMRLRFWRRSKKSRESERV 104
              IE+PK    P +++LR W+     R   R+
Sbjct: 72  SISIEEPKNFVFPTKLKLRNWKHLHCKRYFSRL 99

[Close]

BLAST of Spg017558 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-14
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 14  ISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLSPPPAVLSLGLPKP 73
           ISR SSVGY    +      EGVPF+WE QPGTP +  P+E++PPLSPPPA+LSLGLPKP
Sbjct: 12  ISRNSSVGYYDERM-----PEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74  --CIEQPKIRPRP-RMRLRFWRRSKKSRESERV 104
              IE+PK    P +++LR W+     R   R+
Sbjct: 72  SISIEEPKNFVFPTKLKLRNWKHLHCKRYFSRL 99

[Close]

BLAST of Spg017558 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.6e-04
Identity = 55/166 (33.13%), Postives = 72/166 (43.37%), Query Frame = 0


Query: 15  SRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQ-ELLPPLSPPPAVLSLGLPKP 74
           S  S+   S R  YY G    VPF+WE+ PGTPK P  +   LPPL+PPP+  S      
Sbjct: 54  SSVSAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFS------ 113

Query: 75  CIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHYDKLETSS------ 134
                +IR          RRSKKS +       T + + +GD  G   KL  SS      
Sbjct: 114 -FSGDQIR----------RRSKKSTKKILALIPTRLFWLSGDHNGKAKKLSASSPPSLSE 173

Query: 135 -FLSSECEF----MASPRNSM---SSSSSSSSSPSSLLESLTDFAL 166
             L  E E+      + RN M   SS  SS+  P    +S + F +
Sbjct: 174 RVLIDENEYDLFKFQTERNVMRRFSSFDSSADYPIQRSQSTSCFGI 202

[Close]

BLAST of Spg017558 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.7e-04
Identity = 51/152 (33.55%), Postives = 67/152 (44.08%), Query Frame = 0


Query: 9   MKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQE--LLPPLSPPPAVL 68
           + +K+I + SS   SS  IYY G    VPF WET+PGTPK     E   LPPL+PPP+  
Sbjct: 13  ISSKIIVKESSQVNSSSRIYYYGGA-SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYY 72

Query: 69  SLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHYDKLETS 128
                                      S  S    ++++A TI  +       + K   S
Sbjct: 73  ---------------------------SSSSSSGNKLSKARTIKQT------RFVKTLLS 129

Query: 129 SFLSSECEFMASPRNSMSSSSSSSSSPSSLLE 159
             +S    F  S  +S SSSS SSSSP S +E
Sbjct: 133 RHVSRP-SFSWSSASSSSSSSYSSSSPPSKVE 129

The following BLAST results are available for this feature:

BLAST of Spg017558 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997465.1	2.1e-61	80.37	uncharacterized protein LOC111492375 [Cucurbita maxima]	[more]
KAG7020905.1	3.6e-61	79.39	hypothetical protein SDJN02_17593, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6586081.1	1.8e-60	78.79	Transcription initiation factor TFIID subunit 4b, partial [Cucurbita argyrosperm...	[more]
KAG7029810.1	4.0e-60	79.75	hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023546389.1	4.0e-60	79.50	uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg017558 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg017558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9Q8	1.0e-61	80.37	uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375...	[more]
A0A6J1ENL5	2.5e-60	79.50	uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A6J1FCU1	5.7e-60	78.18	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111444457 PE=4 SV=1	[more]
A0A6J1DGF8	7.7e-57	77.78	uncharacterized protein LOC111020830 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5D3BQA0	3.1e-50	72.46	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]

BLAST of Spg017558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	2.7e-14	51.61	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	2.7e-14	51.61	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT5G01790.1	2.6e-04	33.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G40475.1	9.7e-04	33.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..62
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 9..154
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 9..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017558.1	Spg017558.1	mRNA