Spg017511 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGCTGTCTCTCCCGCCGTTCATCCTCCGCCGTCGCCGCCGCCGACAAAATCCAAGTCGTCCACCTCAACGGCCACGTCCAACTCTTCCACACCCCCATCACCGCCCGCCAGGTCGCCGGAAAGCCCCCGCCGCCGGCGGAGTACTTCATCTGCACAGCGGCGATGCTGGTCTCCCCCGCCGCCAGCCCGGCGCTCAACCCCGACGCCTTCCTGCAGCCGGGAAAGGTCTACTTTATGCTCCCGTTCTCCACTCTCCATCCCGACGTTTCTCTCGCAGACCTGGCCTCCATAGCCAGAAGGCTGACCGCCGCCGCCAAATCCGCCGCGAAGACCGGCTCGGCGCTGCCGTGTGAGGGCGCCGGTGGTGGTGGCGAGTGGAAGGGTCCGGCAGCGGCGAGGTCGAGACAGTGGAGGCCGTTGTTGGACACGATTAAAGAGAAGCCGGTGAATAATAACCAGAGGAGCGAGTCGGATTTGCAAGAGAAAAATAATAATCGTGGATGTATATGGGAATAATTATTATGAGTAATTAATGAAATTTACCATTTTGGGTTTTTTTTTCTTTTCTTTTTCTCTCTTGAAAAAAAAAATATTTAAGGTACATCTACGAGGGAGAATTTGTAAATTAATATCTCAATTTTGCTTTTAGATGAATCTAAATGGTAGATTGGTTTTTGTTAAATATTGATATAATTATATCTATTGTAACTCTTGCTGTTTAAGTTTTTGGATTGATTCGGGAGCCAACTGAGTCATGGCAGCTGGAAAAATCCTTCAGAATGATCTTGGAACATGAATACGGATGCTACATGGATTGGTTGATTAGGAGTCGGAGGCATCAGGTTGGATTGTTTGTGACTCTGTCGGATCTCCAATTTGCACGGTTCTGAACTAGATTGAGAAGAAATGGTCGATTGATTCCTTGGAAGTGCTTGCAATCTGGAAAGGGATGAAAAGTATTATTGAAAATTATAGCCTCGATTGTTGGCTGCTGCTGGTTATAGAATCTGACACCCTTGGGATTATTAACGCTCTGAAGGTGGAATCGAAAGTGCTTACGGAAGTGAAGAACATCATTGAGGCCACAATCGATCTTTGCTCGTTTGGGGAGAAGGTTCCTTAA ATGGGTGGCTGTCTCTCCCGCCGTTCATCCTCCGCCGTCGCCGCCGCCGACAAAATCCAAGTCGTCCACCTCAACGGCCACGTCCAACTCTTCCACACCCCCATCACCGCCCGCCAGGTCGCCGGAAAGCCCCCGCCGCCGGCGGAGTACTTCATCTGCACAGCGGCGATGCTGGTCTCCCCCGCCGCCAGCCCGGCGCTCAACCCCGACGCCTTCCTGCAGCCGGGAAAGGTCTACTTTATGCTCCCGTTCTCCACTCTCCATCCCGACGTTTCTCTCGCAGACCTGGCCTCCATAGCCAGAAGGCTGACCGCCGCCGCCAAATCCGCCGCGAAGACCGGCTCGGCGCTGCCGTGTGAGGGCGCCGGTGGTGGTGGCGAGTGGAAGGGTCCGGCAGCGGCGAGGTCGAGACAGTGGAGGCCGTTGTTGGACACGATTAAAGAGAAGCCGATTGAGAAGAAATGGTCGATTGATTCCTTGGAAGTGCTTGCAATCTGGAAAGGGATGAAAAGTATTATTGAAAATTATAGCCTCGATTGTTGGCTGCTGCTGGTTATAGAATCTGACACCCTTGGGATTATTAACGCTCTGAAGGTGGAATCGAAAGTGCTTACGGAAGTGAAGAACATCATTGAGGCCACAATCGATCTTTGCTCGTTTGGGGAGAAGGTTCCTTAA ATGGGTGGCTGTCTCTCCCGCCGTTCATCCTCCGCCGTCGCCGCCGCCGACAAAATCCAAGTCGTCCACCTCAACGGCCACGTCCAACTCTTCCACACCCCCATCACCGCCCGCCAGGTCGCCGGAAAGCCCCCGCCGCCGGCGGAGTACTTCATCTGCACAGCGGCGATGCTGGTCTCCCCCGCCGCCAGCCCGGCGCTCAACCCCGACGCCTTCCTGCAGCCGGGAAAGGTCTACTTTATGCTCCCGTTCTCCACTCTCCATCCCGACGTTTCTCTCGCAGACCTGGCCTCCATAGCCAGAAGGCTGACCGCCGCCGCCAAATCCGCCGCGAAGACCGGCTCGGCGCTGCCGTGTGAGGGCGCCGGTGGTGGTGGCGAGTGGAAGGGTCCGGCAGCGGCGAGGTCGAGACAGTGGAGGCCGTTGTTGGACACGATTAAAGAGAAGCCGATTGAGAAGAAATGGTCGATTGATTCCTTGGAAGTGCTTGCAATCTGGAAAGGGATGAAAAGTATTATTGAAAATTATAGCCTCGATTGTTGGCTGCTGCTGGTTATAGAATCTGACACCCTTGGGATTATTAACGCTCTGAAGGTGGAATCGAAAGTGCTTACGGAAGTGAAGAACATCATTGAGGCCACAATCGATCTTTGCTCGTTTGGGGAGAAGGTTCCTTAA MGGCLSRRSSSAVAAADKIQVVHLNGHVQLFHTPITARQVAGKPPPPAEYFICTAAMLVSPAASPALNPDAFLQPGKVYFMLPFSTLHPDVSLADLASIARRLTAAAKSAAKTGSALPCEGAGGGGEWKGPAAARSRQWRPLLDTIKEKPIEKKWSIDSLEVLAIWKGMKSIIENYSLDCWLLLVIESDTLGIINALKVESKVLTEVKNIIEATIDLCSFGEKVP Homology
BLAST of Spg017511 vs. NCBI nr
Match: XP_011650123.1 (uncharacterized protein LOC105434722 [Cucumis sativus]) HSP 1 Score: 241.5 bits (615), Expect = 7.0e-60 Identity = 125/160 (78.12%), Postives = 136/160 (85.00%), Query Frame = 0
BLAST of Spg017511 vs. NCBI nr
Match: XP_008460258.1 (PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK08883.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 239.6 bits (610), Expect = 2.6e-59 Identity = 127/159 (79.87%), Postives = 136/159 (85.53%), Query Frame = 0
BLAST of Spg017511 vs. NCBI nr
Match: KAG7029841.1 (hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.9 bits (564), Expect = 5.7e-54 Identity = 114/156 (73.08%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Spg017511 vs. NCBI nr
Match: XP_022996489.1 (uncharacterized protein LOC111491721 [Cucurbita maxima]) HSP 1 Score: 218.4 bits (555), Expect = 6.3e-53 Identity = 113/156 (72.44%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Spg017511 vs. NCBI nr
Match: KAE8651677.1 (hypothetical protein Csa_021330 [Cucumis sativus]) HSP 1 Score: 215.3 bits (547), Expect = 5.3e-52 Identity = 110/139 (79.14%), Postives = 118/139 (84.89%), Query Frame = 0
BLAST of Spg017511 vs. ExPASy TrEMBL
Match: A0A0A0LHC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 3.4e-60 Identity = 125/160 (78.12%), Postives = 136/160 (85.00%), Query Frame = 0
BLAST of Spg017511 vs. ExPASy TrEMBL
Match: A0A5D3CAJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00050 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.3e-59 Identity = 127/159 (79.87%), Postives = 136/159 (85.53%), Query Frame = 0
BLAST of Spg017511 vs. ExPASy TrEMBL
Match: A0A1S3CC70 (uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.3e-59 Identity = 127/159 (79.87%), Postives = 136/159 (85.53%), Query Frame = 0
BLAST of Spg017511 vs. ExPASy TrEMBL
Match: A0A6J1K8V3 (uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 3.1e-53 Identity = 113/156 (72.44%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of Spg017511 vs. ExPASy TrEMBL
Match: W9QLQ9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016842 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 6.6e-24 Identity = 71/166 (42.77%), Postives = 97/166 (58.43%), Query Frame = 0
BLAST of Spg017511 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 6.6e-08 Identity = 33/118 (27.97%), Postives = 61/118 (51.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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