Spg017487 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017487
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Auxin-responsive protein
Location	scaffold4: 41640947 .. 41643269 (+)
RNA-Seq Expression	Spg017487
Synteny	Spg017487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATATCGTTGAGGATTAATGGGGAGGTTTGAAAAAACGTAGAGTGAGAAAGCACAATATTGGGTCGGTTTACGACACCTGCCTGACTCCTTCCCGACATTTGTGCTCTCTCTCTCTAAAACCATTTCTTTTTTCACTTTCTCTCTCTAAAACAAATTTCTTTTTTTTTTTTTTTTTCGTATCGAAATCCATATATGAATATATGCTTCTTTTTCTTCACCAAACAAACTCCTTTTCTATTTCTATTTCTCTCTCTCTCTCTTAAAATTAGTAAACCATGAACACCTTCCACTCTCAAACACAATCCCCGGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCCGGCGCAGCAGGCGGAGGAGGAGGATTTCGCGGCGGTCATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAGGCCCTGAGACGGATGTTCGTCGACGAAGACGACGGCGGTGGCGGTGGTGGGGAATTGTCCGGCGAGCGGCGGCTGGACCTGACGAACGCCGTTCCGGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAAGTTAGTGCCCCCCATTTTTCTCTCTCTTTTTCTTCAATTAGGTTTTCTTTTTTCTTTTTGGGTTTCTAACTTTTAGTTTTTTTTTTTTTTTGGGTTTACTTTTTTTATTTTTTAGTTTCAAGTGTTTTGTTTGAGTTTTTTTTTTTTCTTCAGTTAGGTTTTCTTTTTGAAAAATTATGAGTTTTTTTTTAAACAAAATAAAATTACAAAGGTAGGAAGAGTGGCTAAATCAAACAAGGATGATAACGATGTCTTAAATAATGTCCCGTTTGATAATCATTTGGTTTTTTGTTTTTTATTTTTGAAAATTATGCTTGTTTTCTCCTAAATTTTTCATCCTAGTTAAGGTTGCATTTGAATTCCTAGCCAAATTTTAAAAACAAAAACAAATTTTTGAAAGTTTTTTTTTCAAAATTGGACTTGGTTTTTGAAAACAAGGTAGAAAGTTGATACTAAAACCAAGAAACTTATAGGTAGAAGTATCTGTGTATAAGCTTAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAGCGGGGTGTTATTAACTTTTAAATTTTGTTATTGGGTTTGAATCTTAAAAAATTTCCCATAAAATATAATAATTTGTGAGGTTTTAGACTTAAAATTAAAGGTTTTGCAAGTATTTTGACTTGTTGGCTATATATTAAATCATTGTTCTCGAAGTTTGTAAAAATTAAAATTTTGGAATTGCAATAAAATAACCTCAATTTTTTTTTAGTGGTTGAAATTATGAGATCACTCCAAGCTTACAAAATTCTTTGAATTTATTGAATTGAACTCAACTAGTGTAGGTTAGAGTTGCAACAGAGAGTTTAGGGTAAGTGTTCATATTATAAATTACACACAGTATATATAATTAAGGGTTTTTTTTTTTTCTCTCTAAATTTTTTCTTCAAAATTTTGTTCTAAATTTAACAAAATTGCACTATATATAGTTATATTATATTTTAAATAAGGGTAATTTAAGGATTTATTTGATTGATTTTTATTTTTATATCTGAATTAATCATCTTTTTTCATTAAATATTTTTTAAAATCCTTTTTTAGATTATTCTTTAATTTTAATGAAAATACGTTTGGAAACTAAAAACATAAACAAAGAGAGAAACAACCTAGATGATAAAATCTTCACCTTCACCTTTGATAGTGAAAACTAAAATAAACTATTTAATGGAACTAAAAAAACATTTTCTAAATATAAAGACGGATTTTTTTTTTAATTTTAAAAACAGAAATGTATATATTTGTTTTCTTTTTTTTTTTTTTTTTTTTTTCCTGAAAACATTATGTAAATAAAGAGAATAATTAATAATATGAAATTTGTGTGTGACAGTGATTTTGTGCGAGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAAATTGATATATGTGTTAATTATATATTTTATGAGAGCCATTTGTATTAATTAATATTATCTTATAATTATGATTTCTTTCATAAAATATGAAAGAAATAATAAGATTTTTCCTTTTGTTTAATGTTATTGAATGCTTCCATCTATGTTCTCTCTAATCAAAATATTAAAACCAACTTCTGAGCATATAATATATTATAATATATATATATAATTATGTTGTGCC

mRNA sequence

ATGAACACCTTCCACTCTCAAACACAATCCCCGGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCCGGCGCAGCAGGCGGAGGAGGAGGATTTCGCGGCGGTCATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAGGCCCTGAGACGGATGTTCGTCGACGAAGACGACGGCGGTGGCGGTGGTGGGGAATTGTCCGGCGAGCGGCGGCTGGACCTGACGAACGCCGTTCCGGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGAGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAA

Coding sequence (CDS)

ATGAACACCTTCCACTCTCAAACACAATCCCCGGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCCGGCGCAGCAGGCGGAGGAGGAGGATTTCGCGGCGGTCATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAGGCCCTGAGACGGATGTTCGTCGACGAAGACGACGGCGGTGGCGGTGGTGGGGAATTGTCCGGCGAGCGGCGGCTGGACCTGACGAACGCCGTTCCGGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGAGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAA

Protein sequence

MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

Homology

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BLAST of Spg017487 vs. NCBI nr
Match: XP_038890972.1 (auxin-responsive protein IAA33 [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 5.0e-70
Identity = 140/156 (89.74%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGPAQQAE---EEDFAAVIPPVTVVLEGRA 60
           MN F S+ TQSPAAAAAAE FKMRRWPERR+GP QQAE   EEDFAAVIPPVTVVLEGRA
Sbjct: 1   MNAFQSRTTQSPAAAAAAECFKMRRWPERRVGPPQQAEGEGEEDFAAVIPPVTVVLEGRA 60

Query: 61  ICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIE 120
           ICQRISLHKHASYESLAKALRRMFVD++DGGGGGGE SGER+LDLTNAVPGH+VAYEDIE
Sbjct: 61  ICQRISLHKHASYESLAKALRRMFVDDEDGGGGGGENSGERQLDLTNAVPGHIVAYEDIE 120

Query: 121 NDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 153
           NDLLLAGDLNWNDFVRVAKRIRI+PVKANSRRGRGN
Sbjct: 121 NDLLLAGDLNWNDFVRVAKRIRIMPVKANSRRGRGN 156

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BLAST of Spg017487 vs. NCBI nr
Match: XP_022969694.1 (auxin-responsive protein IAA33 [Cucurbita maxima])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 139/163 (85.28%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVL 60
           MNTFHS TQSPAAAAAAEYFKMRRWPE +LGP         Q  EEEDFAAVIPPVTVVL
Sbjct: 1   MNTFHSHTQSPAAAAAAEYFKMRRWPETQLGPPPPLQQQQQQMEEEEDFAAVIPPVTVVL 60

Query: 61  EGRAICQRISLHKHASYESLAKALRRMFVDEDDGG---GGGGELSGERRLDLTNAVPGHL 120
           EGRAICQRISLHKHASYESLAKALRRMFVD+DDGG   GGGGE SG+R+LDL NAVPGHL
Sbjct: 61  EGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVPGHL 120

Query: 121 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 153
           VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Sbjct: 121 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGN 163

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BLAST of Spg017487 vs. NCBI nr
Match: KAG6586078.1 (Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67
Identity = 139/167 (83.23%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGP----------AQQAEEEDFAAVIPPV 60
           MNTFHS TQSP  AAAAAAEYFKMRRWPE +LGP           ++ EEEDFAAVIPPV
Sbjct: 1   MNTFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPV 60

Query: 61  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD---GGGGGGELSGERRLDLTNAV 120
           TVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD   GGGGGGE SG+R+LDL NAV
Sbjct: 61  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAV 120

Query: 121 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 153
           PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 167

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BLAST of Spg017487 vs. NCBI nr
Match: XP_023538318.1 (auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 138/162 (85.19%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGP---------AQQAEEEDFAAVIPPVTV 60
           MNTFHS TQSP AAAAAAEYFKMRRWPE +LGP          ++ EEEDFAAVIPPVTV
Sbjct: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTV 60

Query: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLV 120
           VLEGRAICQRISLHKHASYESLAKALRRMFVD+DD  GGGGE SGER+LDL NAVPGHLV
Sbjct: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--GGGGEPSGERQLDLANAVPGHLV 120

Query: 121 AYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 153
           AYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 AYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 160

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BLAST of Spg017487 vs. NCBI nr
Match: XP_022938283.1 (auxin-responsive protein IAA33 [Cucurbita moschata])

HSP 1 Score: 257.3 bits (656), Expect = 8.3e-65
Identity = 138/168 (82.14%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPP 60
           MNTFHS TQSP  AAAAEYFKMRRWPE +LG  P QQ            EEEDFAAVIPP
Sbjct: 1   MNTFHSHTQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPP 60

Query: 61  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD---GGGGGGELSGERRLDLTNA 120
           VTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD   GGGGGGE S +R+LDL NA
Sbjct: 61  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANA 120

Query: 121 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 153
           VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 166

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BLAST of Spg017487 vs. ExPASy Swiss-Prot
Match: Q9FKM7 (Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35
Identity = 81/148 (54.73%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 5   HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLH 64
           H+ + S + AA   +           G     E++  ++V+PPVTVVLEGR+ICQRISL 
Sbjct: 42  HNNSNSSSGAAGRSF----------QGFGLNVEDDLVSSVVPPVTVVLEGRSICQRISLD 101

Query: 65  KHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGD 124
           KH SY+SLA ALR+MFVD  D             LDL+NA+PGHL+AYED+ENDLLLAGD
Sbjct: 102 KHGSYQSLASALRQMFVDGADSTDD---------LDLSNAIPGHLIAYEDMENDLLLAGD 161

Query: 125 LNWNDFVRVAKRIRILPVKANSRRGRGN 153
           L W DFVRVAKRIRILPVK N+R+ + N
Sbjct: 162 LTWKDFVRVAKRIRILPVKGNTRQVKRN 170

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BLAST of Spg017487 vs. ExPASy Swiss-Prot
Match: Q6K846 (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 48  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRL--DLTNAV 107
           V V  EG AI +++ L  H+SY+ LA  L RMF   D          GE+++  D     
Sbjct: 95  VKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDH--------QGEKKMANDDHGDA 154

Query: 108 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 141
            G +V YED + D +L GD+ W+DF R  KR++IL
Sbjct: 155 AGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181

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BLAST of Spg017487 vs. ExPASy Swiss-Prot
Match: Q69VE0 (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-09
Identity = 43/137 (31.39%), Postives = 64/137 (46.72%), Query Frame = 0


Query: 5   HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLH 64
           H+  + P+  A A       WP  R        E+   A +  V V ++G    +++ L 
Sbjct: 50  HADAKPPSPKARAV-----GWPPVRAYRRNALREDSARAKL--VKVAVDGAPYLRKVDLA 109

Query: 65  KHASYESLAKALRRMFVD-EDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAG 124
            HA Y  L +AL  MF       GGGGG+  G + +DL      ++  YED + D +L G
Sbjct: 110 AHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVDLVTGAE-YVPTYEDKDGDWMLVG 169

Query: 125 DLNWNDFVRVAKRIRIL 141
           D+ W  FV   KRIR++
Sbjct: 170 DVPWKMFVESCKRIRLM 178

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BLAST of Spg017487 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 9.7e-08
Identity = 32/95 (33.68%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 48  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAV 107
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +  
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVG---LTSQFTKPLRLLDGS 191

Query: 108 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 141
              ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 SEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

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BLAST of Spg017487 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.8e-07
Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 42  AAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDL 101
           AA    V V ++G    +++ L  + SY  L+KAL +MF     G  G   ++G     +
Sbjct: 157 AAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKI 216

Query: 102 TNAVPG--HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 141
            + + G  ++  YED + D +L GD+ W  FV   KR+RI+
Sbjct: 217 ADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIM 257

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BLAST of Spg017487 vs. ExPASy TrEMBL
Match: A0A6J1I3D9 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.0e-69
Identity = 139/163 (85.28%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVL 60
           MNTFHS TQSPAAAAAAEYFKMRRWPE +LGP         Q  EEEDFAAVIPPVTVVL
Sbjct: 1   MNTFHSHTQSPAAAAAAEYFKMRRWPETQLGPPPPLQQQQQQMEEEEDFAAVIPPVTVVL 60

Query: 61  EGRAICQRISLHKHASYESLAKALRRMFVDEDDGG---GGGGELSGERRLDLTNAVPGHL 120
           EGRAICQRISLHKHASYESLAKALRRMFVD+DDGG   GGGGE SG+R+LDL NAVPGHL
Sbjct: 61  EGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVPGHL 120

Query: 121 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 153
           VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Sbjct: 121 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGN 163

[Close]

BLAST of Spg017487 vs. ExPASy TrEMBL
Match: A0A6J1FIF6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.0e-65
Identity = 138/168 (82.14%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPP 60
           MNTFHS TQSP  AAAAEYFKMRRWPE +LG  P QQ            EEEDFAAVIPP
Sbjct: 1   MNTFHSHTQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPP 60

Query: 61  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDD---GGGGGGELSGERRLDLTNA 120
           VTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD   GGGGGGE S +R+LDL NA
Sbjct: 61  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANA 120

Query: 121 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 153
           VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 166

[Close]

BLAST of Spg017487 vs. ExPASy TrEMBL
Match: A0A1S3BRI6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.2e-62
Identity = 128/145 (88.28%), Postives = 133/145 (91.72%), Query Frame = 0


Query: 8   TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHA 67
           TQSPAAAAAAEYFKM RW ERR+GP QQA EEDF+AVIPPVTVVLEGRAICQRISLHKH 
Sbjct: 4   TQSPAAAAAAEYFKMARWAERRVGPPQQA-EEDFSAVIPPVTVVLEGRAICQRISLHKHG 63

Query: 68  SYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW 127
           SYESLAKALRRMFVD+DD     GE SGERRLDLTNAVPG++VAYEDIENDLLLAGDLNW
Sbjct: 64  SYESLAKALRRMFVDDDD----EGEESGERRLDLTNAVPGYIVAYEDIENDLLLAGDLNW 123

Query: 128 NDFVRVAKRIRILPVKANSRRGRGN 153
           NDFVRVAKRIRILPVKANSRRGR N
Sbjct: 124 NDFVRVAKRIRILPVKANSRRGRAN 143

[Close]

BLAST of Spg017487 vs. ExPASy TrEMBL
Match: A0A0A0LH98 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 126/145 (86.90%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 8   TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHA 67
           TQSPAAAAAAEYFKM RW +RR+ P QQA EEDFAAVIPPVTVVLEGRAICQRISLHKH 
Sbjct: 4   TQSPAAAAAAEYFKMTRWADRRVSPPQQA-EEDFAAVIPPVTVVLEGRAICQRISLHKHG 63

Query: 68  SYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW 127
           SYESLAKALRRMFVD+DD     GE SGER LDLTNAVPG++VAYEDIENDLLLAGDLNW
Sbjct: 64  SYESLAKALRRMFVDDDD---NDGEDSGERGLDLTNAVPGYIVAYEDIENDLLLAGDLNW 123

Query: 128 NDFVRVAKRIRILPVKANSRRGRGN 153
           NDFVRVAKRIRILPVKANSRRGR N
Sbjct: 124 NDFVRVAKRIRILPVKANSRRGRAN 144

[Close]

BLAST of Spg017487 vs. ExPASy TrEMBL
Match: A0A6J1DKE3 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 8.4e-55
Identity = 118/137 (86.13%), Postives = 120/137 (87.59%), Query Frame = 0


Query: 15  AAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAK 74
           AAAEY K RRWPERR      A EED +AVIP VTVVLEGRAICQRISLHKHASYESLAK
Sbjct: 13  AAAEYLKKRRWPERR----AVAAEEDVSAVIPAVTVVLEGRAICQRISLHKHASYESLAK 72

Query: 75  ALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVA 134
           ALR MFV EDDGGGG    SGERRLDL+NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVA
Sbjct: 73  ALRGMFVPEDDGGGGDSG-SGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVA 132

Query: 135 KRIRILPVKANSRRGRG 152
           KRIRILPVKANSRRGRG
Sbjct: 133 KRIRILPVKANSRRGRG 144

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BLAST of Spg017487 vs. TAIR 10
Match: AT5G57420.1 (indole-3-acetic acid inducible 33 )

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 81/148 (54.73%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 5   HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLH 64
           H+ + S + AA   +           G     E++  ++V+PPVTVVLEGR+ICQRISL 
Sbjct: 42  HNNSNSSSGAAGRSF----------QGFGLNVEDDLVSSVVPPVTVVLEGRSICQRISLD 101

Query: 65  KHASYESLAKALRRMFVDEDDGGGGGGELSGERRLDLTNAVPGHLVAYEDIENDLLLAGD 124
           KH SY+SLA ALR+MFVD  D             LDL+NA+PGHL+AYED+ENDLLLAGD
Sbjct: 102 KHGSYQSLASALRQMFVDGADSTDD---------LDLSNAIPGHLIAYEDMENDLLLAGD 161

Query: 125 LNWNDFVRVAKRIRILPVKANSRRGRGN 153
           L W DFVRVAKRIRILPVK N+R+ + N
Sbjct: 162 LTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]

BLAST of Spg017487 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-09
Identity = 32/95 (33.68%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 48  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAV 107
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +  
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVG---LTSQFTKPLRLLDGS 190

Query: 108 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 141
              ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 SEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Spg017487 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-09
Identity = 32/95 (33.68%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 48  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAV 107
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +  
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVG---LTSQFTKPLRLLDGS 191

Query: 108 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 141
              ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 SEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]

BLAST of Spg017487 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-09
Identity = 32/95 (33.68%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 48  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGELSGE--RRLDLTNAV 107
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G   L+ +  + L L +  
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVG---LTSQFTKPLRLLDGS 190

Query: 108 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 141
              ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 SEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Spg017487 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.8e-08
Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 11  PAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYE 70
           PA A    +  +R + +  +   Q++     AA    V V ++G    ++I L  + SY+
Sbjct: 78  PAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAF--VKVSMDGAPYLRKIDLRMYKSYD 137

Query: 71  SLAKALRRMFVDEDDGGGGGGE----LSGERRL-DLTNAVPGHLVAYEDIENDLLLAGDL 130
            L+ AL  MF     G  GG E       ER+L DL N+   ++ +YED + D +L GD+
Sbjct: 138 ELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSW-DYVPSYEDKDGDWMLVGDV 197

Query: 131 NWNDFVRVAKRIRIL 141
            W  FV   KR+R++
Sbjct: 198 PWPMFVDTCKRLRLM 209

The following BLAST results are available for this feature:

BLAST of Spg017487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890972.1	5.0e-70	89.74	auxin-responsive protein IAA33 [Benincasa hispida]	[more]
XP_022969694.1	1.2e-68	85.28	auxin-responsive protein IAA33 [Cucurbita maxima]	[more]
KAG6586078.1	1.0e-67	83.23	Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023538318.1	4.0e-67	85.19	auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]	[more]
XP_022938283.1	8.3e-65	82.14	auxin-responsive protein IAA33 [Cucurbita moschata]	[more]

BLAST of Spg017487 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKM7	2.4e-35	54.73	Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=...	[more]
Q6K846	1.0e-09	38.95	Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P...	[more]
Q69VE0	5.1e-09	31.39	Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23...	[more]
Q38831	9.7e-08	33.68	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
P0C132	4.8e-07	31.68	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]

BLAST of Spg017487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3D9	6.0e-69	85.28	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1	[more]
A0A6J1FIF6	4.0e-65	82.14	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1	[more]
A0A1S3BRI6	4.2e-62	88.28	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1	[more]
A0A0A0LH98	1.0e-60	86.90	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1	[more]
A0A6J1DKE3	8.4e-55	86.13	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=...	[more]

BLAST of Spg017487 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57420.1	1.7e-36	54.73	indole-3-acetic acid inducible 33	[more]
AT2G33310.1	6.9e-09	33.68	auxin-induced protein 13	[more]
AT2G33310.2	6.9e-09	33.68	auxin-induced protein 13	[more]
AT2G33310.3	6.9e-09	33.68	auxin-induced protein 13	[more]
AT1G04250.1	5.8e-08	31.11	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 45..150 e-value: 1.1E-19 score: 72.3
None	No IPR available	PANTHER	PTHR31734:SF7	AUXIN-RESPONSIVE PROTEIN IAA33	coord: 25..149
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 36..140 e-value: 5.2E-15 score: 56.0
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 25..149
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 45..144 score: 15.578127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017487.1	Spg017487.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding