Spg017476 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017476
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold4: 38528461 .. 38529386 (+)
RNA-Seq Expression	Spg017476
Synteny	Spg017476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCGAGTCTCGGGGCCGAGTCCTAAAGTTGGGCGTGAGTTAGGTTCGTGGGTGGGATAGCTCATAGGTAGTGCGCAATTTCCATATTCGTTCTGATGCACAATATTTCAGCGGGTCCGTCAGCAGCCAGTCCGAAGTCGGATCGTCATCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAAGTGATGTGGATTGTGCCCCCAAGTATGTCATCGAGGACGATGACAGTTTAAGTGGGGGAGAATGTCACAACCATACTAGAAGAGAGTAGGTTGTGACCCTCACTGAGTAGACAGTGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGTCAGTGGTATGCTTAATGGGGGTCAGATGGGGCCCCGGGCCATGACCTCGGAAGTCGGGGTTCCGTCGTGAGTTTTGACGAGCGGCTCTGGAGTTAAGTGCATATGAGTGAAGTATGCAAGCCCGCAAAGTTTCATGTCAATCGGACACCAGACGGGCGCTCCACGTTGGCGTATGACTCCTCGTGAAAATGACGTGCAAGGGTGTCAGACCAAATATGCCTCAGAATGTACTATAGGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACCGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

mRNA sequence

ATGTTGCGAGTCTCGGGGCCGAGTCCTAAAGTTGGGCCGGGTCCGTCAGCAGCCAGTCCGAAGTCGGATCGTCATCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAAGTGATGTGGATTGTGCCCCCAATGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACCGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

Coding sequence (CDS)

ATGTTGCGAGTCTCGGGGCCGAGTCCTAAAGTTGGGCCGGGTCCGTCAGCAGCCAGTCCGAAGTCGGATCGTCATCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAAGTGATGTGGATTGTGCCCCCAATGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACCGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

Protein sequence

MLRVSGPSPKVGPGPSAASPKSDRHRDDAEIKWGRMSQSIVQVMWIVPPMKWWHVECRPSGHVRGPRERSAMMRSRRTMHHPTHQDEWTLMSQEGMSILRSNSVVRRGEAWCQLSTTPGPCGLSELPHGTCVCHGVGERCKTSVLGVFLWEWVSKDRVGRHGCADIAPPPMG

Homology

The following BLAST results are available for this feature:

BLAST of Spg017476 vs.


Match Name	E-value	Identity	Description

BLAST of Spg017476 vs.


Match Name	E-value	Identity	Description

BLAST of Spg017476 vs.


Match Name	E-value	Identity	Description

BLAST of Spg017476 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017476.1	Spg017476.1	mRNA