Spg017451 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACTCTTTAGTGGATGCTAATGGAGACACAACTCCAGATTATATGGGATGGTATCAGAATATTACTAGACGCTTCATCACTCGAAAGGGGGCCTCATATGGTCACGTGGTAAAGTTTTAATCCAAATTGTTAAATCTTATTATTTGATGTTTAAGTTTAATCTTATTTTATTCATTATTTCTTAGAGGTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGCACTAGTGGTGAGGCCAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGCCACCTCCCCTGGGTCCTAGGCGTAGACGACGTGCTCGAGAGGAGGACATTCCAGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAAACACAAGATGGTGGTACTCCTTTCACTCAACTTGTTTTGATCCCAACTCCTGGTATGTAGTATTTTCAAACTCTGATTCCACCATACTATGAGGCTGGTCCATCATCATCACATGAGACAGGTCCCTCATCGTCATATGCTCATAGAGAGCAACCAGAAGAACAAGAGGAACATGAGGTACAAGAGGAGCAAGCGGTACAAGATGAACAAGATTAGGCACCAAGGGGACATCGTCGTCAACCACCTCGTAAACGGTGACGTCCACATTGTGGAACTCATTAGCATTTTTGCATTTTTCTTTTGTTTAGGTGAACTCATTAGCCTTTTATTATGATCATGTGTATTGTTGAACATTTTATTTTATAAACTAAATTTTAATTTTTAATTTATATGTGTCATTAATTTTTTGCAAAATTTTGAAAGAAATTACTTATTCTTTAAAAAGATGAAAATATTAAAGATTTTTTTTTTTAAATATTGTTAGAAAAACTTAATGACATTCAAACTTAATATTGAAGAAAGTGGAACTTTAAAAAAAACTTAATAAATGTATATAAAAAAAAGACAAGATTGTTAAGATATCTTCACATTTTTTACAAGATTATGTCACAATTGTATAAAATATAAAATAAAATAAATGTCTATAAAATAAAGGGAAATTGTGTTGAATAACTACAAATAAAAGGCATCCTTGATTTTTGGCTACGAAAGTTTCGATTTTGCAGGTGTGGCTACCGGTATTTTAGGAACCGTTTCCTTTTTTTTTTTAACGTTTTTACCCCTAGTATATACGGCTATATACAAACGCCGTTAACAGTCTTTTTTGTTGCAAACGTCCCCTTTTTGCGTGGTGGATGGATCCCTACTTACATGAGATCGGTTGGCGGTTTGTTTTGATCCCGATTTACCTATTTTTCAGGCTTAGGCTTTATAACGGTAAAAAAATTATTTTTTTCTCCACATTTTTTCCCATCATATAAATGTCACAGTTTATTATCGTTTTGTTGAATATCACGTTCACATTGTCGTGGGTAATTGCCGTTGTAATTGCCAATGGTTAAAAGGGTAAGAATAAGGTCACACACACAAAAAAGCACACTAACATAGTTCAATCCATACAGACAAGAAGATGCAGGGTTAGCTGGAAACAGTAGATGTATATACTAGTACATACAGATGTATAGAATGTGAGTATTTCCTTTTATACAAACTTGCCAATGTATAGAATGTAAGATTGGGGGGGGGGGGTATTATGGGTGCACACAGCAGCACAAAGGAAATACTCCGAACAACAGATGTACAATACACAGCAACACATTCAGCAGCATGAAGCAGTCAACAGATGGATTACCCCAAAAAAAATACATCAAACAATTCTATAATTGTATGTAACAGTTCAATCTACATAGACAACAGACGTACGATATCATAGATGTATATACTAATACATACACGTTCACAGGCAGACAATGGAGGGTATATAACTGTTCAAACACACGTACATACGAGCATATATGTATATAGATGTACGAGATAGTAGTTGTACATATCAGTATATAAATGTATGAGATCATGGATGTATATACTAATACATACACGTTCACAGGCAGACAATGTACACAGACTTGCCAATACATAGATTGTAAGGTGCAGGGGGGTATATAACTCCTCTCACACACTTTCATATGACCACACCCCAACATACTTTCCAGAGGAGTTTGCAACAATGATGGAATAGTATTTATCAGTACATACCGCTCTGGTGGGTTCGACCTCCTCACTTTCATCCCTTTTTGTCCGTCTGTCCTTTCCTTTGGGTCTCTTCGCATCCTGGATGTTAATTAGGGAGTTTAATTCTCTAATTTGTAATTCACAAGGGGGATGATGTGGGTGATCTTTTTTACCTTTTTGTCTACCGTTTTCTTTTTCTTGCTATCTCCTTCGTCTCCGCTATCGCTTGAGAAGTAATCGTCTTCAATAGAATGGTATTCCCCCGTATCGGCGCTTGCGTCAACTTCTTCCTGTTTTTTAACACAATTACACGAGTAATTACAGCATGTTTTACACAACCTAAAGAGTAAATACAGAGTCTTACCTCCACGGGCTTAGTCTTTTTTGGCCTCTGCTTACAATGGAGCGTAATATTCTTGGATTGCATGGATGAAACGAAATCCCTCAAATCTCGGGGGAATGTATCAGTTTGTTGCTAATATAAGGGAATGGGAATGAAGCTGTTACCTTAGTTTGAATTTCTGAGAAATTGTATAGTCCTCGCACAGAAGGAGAATCGATGGAGGATGTGGGGCGAGCAAGAGTCTCGACGGCGCGACGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGTCGGCGCGATGCAAGAGGTAGGGATTGGTATACGCTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAA AACTCTTTAGTGGATGCTAATGGAGACACAACTCCAGATTATATGGGATGGTATCAGAATATTACTAGACGCTTCATCACTCGAAAGGGGGCCTCATATGGTCACGTGAGGTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGCACTAGTGGTGAGGCCAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGCCACCTCCCCTGGGTCCTAGGCGTAGACGACGTGCTCGAGAGGAGGACATTCCAGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAAACACAAGATGGTGGTACTCCTTTCACTCAACTTGTTTTGATCCCAACTCCTGAGAGCAACCAGAAGAACAAGAGGAACATGAGGTACAAGAGGAGCAAGCGGTACAAGATGAACAAGATTAGGCACCAAGGGGACATCGTCGTCAACCACCTCGTAAACGGTGACGTCCACATTGTGGAACTCATTAGCATTTTTGCATTTTTCTTTTGTTTAGGTGTGGCTACCGAAGGAGAATCGATGGAGGATGTGGGGCGAGCAAGAGTCTCGACGGCGCGACGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGTCGGCGCGATGCAAGAGGTAGGGATTGGTATACGCTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAA AACTCTTTAGTGGATGCTAATGGAGACACAACTCCAGATTATATGGGATGGTATCAGAATATTACTAGACGCTTCATCACTCGAAAGGGGGCCTCATATGGTCACGTGAGGTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGCACTAGTGGTGAGGCCAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGCCACCTCCCCTGGGTCCTAGGCGTAGACGACGTGCTCGAGAGGAGGACATTCCAGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAAACACAAGATGGTGGTACTCCTTTCACTCAACTTGTTTTGATCCCAACTCCTGAGAGCAACCAGAAGAACAAGAGGAACATGAGGTACAAGAGGAGCAAGCGGTACAAGATGAACAAGATTAGGCACCAAGGGGACATCGTCGTCAACCACCTCGTAAACGGTGACGTCCACATTGTGGAACTCATTAGCATTTTTGCATTTTTCTTTTGTTTAGGTGTGGCTACCGAAGGAGAATCGATGGAGGATGTGGGGCGAGCAAGAGTCTCGACGGCGCGACGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGTCGGCGCGATGCAAGAGGTAGGGATTGGTATACGCTCTGTGTTGGGGGTGGAAAATGGTGGGAAATGGAGGATTAA NSLVDANGDTTPDYMGWYQNITRRFITRKGASYGHVRSCFQQIRDISEDLDVLNLCTSGEASMEQLQHMYRIPMPPPLGPRRRRRAREEDIPVVHDEVHHNVEDVPPLTQTQDGGTPFTQLVLIPTPESNQKNKRNMRYKRSKRYKMNKIRHQGDIVVNHLVNGDVHIVELISIFAFFFCLGVATEGESMEDVGRARVSTARRKKVVGTADVGRRRDARGRDWYTLCVGGGKWWEMED Homology
BLAST of Spg017451 vs. NCBI nr
Match: TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 3.5e-17 Identity = 53/117 (45.30%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Spg017451 vs. NCBI nr
Match: KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 2.9e-16 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 0
BLAST of Spg017451 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.0 bits (232), Expect = 1.9e-15 Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Spg017451 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 88.6 bits (218), Expect = 8.0e-14 Identity = 51/129 (39.53%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Spg017451 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 85.1 bits (209), Expect = 8.8e-13 Identity = 44/119 (36.97%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of Spg017451 vs. ExPASy TrEMBL
Match: A0A5D3CH23 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00320 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17 Identity = 53/117 (45.30%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Spg017451 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.4e-16 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 0
BLAST of Spg017451 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 9.2e-16 Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Spg017451 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.9e-14 Identity = 51/129 (39.53%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Spg017451 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 4.3e-13 Identity = 44/119 (36.97%), Postives = 73/119 (61.34%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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