Spg017418 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg017418
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Locationscaffold4: 38623577 .. 38626560 (+)
RNA-Seq ExpressionSpg017418
SyntenySpg017418
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACTTTTACACGGGTTCTACTACCTATTGTTGCTTCAATGAAATGAGGTTGCAAGAAGATAAAGCTCCTATCATTGCAAGCGGTGAAATAACATTGCAGGGGGCATGTACTGATGGCAAGTTTATTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACATAGTGACTGTCATGATGACTGAAACAAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGGTTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGAGCCAAATTGAGAACCAACATATCGCTAAATCAAGTCAAACCCAAGTCATAAAAAATCATGACAAAGGAAAGACTACAGTGCAAGATGATCAACCACAGTGTTCTGCTTCGGTCGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTATTCCAAACCTTATACTATGAGGATTGATAACTTGAGAACGCCAATCGGGTATCAGCCACCGAAATTTCAGCAGTTTGATGGAAAGGGCAATCCTAAATAGCATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACACGAGGGGACCTACTAGTCAAACAGTTTGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATGGACAGTTGGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTCTACAGCACCAGACGAACCGTTAGCATGTTCGAGCTCACCAACACAAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGCCTCACCGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCGCTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTTGAAGAACTAGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTACTCCCTAATATGAGGAAAGAAGGAAGGAATGACGAAGAGACTATAGAAGAATCTATGGTTATAAACACAACCCTTCCCAAGTCGTCTTCAAAGGAAAAGCGACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCCGATGCCGACATCCCTGATATGTTGGAACAACTACTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCTAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCTATGGAAGGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAGGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCCTTCTCCAAAAATTTCCACAAAAAGGAAAAAGAGAACTTTGCGACTTCCTACTGCATTAACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCAGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGCTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGCGCTCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCAACCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATGTAAAAACTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGAGCAAAAATTTTGAACTACGTTATGAATTGATCCCTTTTCGTCAAAGGGTACGTAGGCAGCTTAAAGAAAGCTTTAGGTTCAGTCTCTGCAAATAAAAAAATGTAACAAATATTGAAGCGCGATAAGACAAATTGAAGAAACTCATCACTACTGGGGGCAACACAGCAAATGGAAGTTGTGCACCGTTATGAATGTGAAGCTACGAGTTGGATGAATAAAAGAAGACTTCATTCCTCCAAATTTGATGTCTCGCTCGCCTTAAGTCCGGTGTTCCACTCACCCTAAGTTCGCAGTTCCTTCCTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTTCTCCCAAATTTGAAGGTTCTCACGCGCTCCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGCTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAAGGTTCTCACGCGCTCCGCTGCTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCATGCGTTTCGCTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTTAAAGTTCTCAAAGGTTCTCACGCGAGGTTCTTATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTGACGCTGCGCTGCTTCCTTCACCACGTTCGAAGGTTCTTACGCTGCACTGCTTCGCTGTTCCTTCTCCAAATTCGAAGGTTCTCATGCTACGCTAG

mRNA sequence

ATGAACAACTTTTACACGGGTTCTACTACCTATTGTTGCTTCAATGAAATGAGGTTGCAAGAAGATAAAGCTCCTATCATTGCAAGCGGTGAAATAACATTGCAGGGGGCATGTACTGATGGCAAGTTTATTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACATAGTGACTGTCATGATGACTGAAACAAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCAGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGCTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGCGCTCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCAACCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCGCAGTTCCTTCCTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTTCTCCCAAATTTGAAGGTTCTCACGCGCTCCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGCTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAAGGTTCTCACGCGCTCCGCTGCTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCATGCGTTTCGCTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTTAAAGTTCTCAAAGGTTCTCACGCGAGGTTCTTATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTGACGCTGCGCTGCTTCCTTCACCACGTTCGAAGGTTCTTACGCTGCACTGCTTCGCTGTTCCTTCTCCAAATTCGAAGGTTCTCATGCTACGCTAG

Coding sequence (CDS)

ATGAACAACTTTTACACGGGTTCTACTACCTATTGTTGCTTCAATGAAATGAGGTTGCAAGAAGATAAAGCTCCTATCATTGCAAGCGGTGAAATAACATTGCAGGGGGCATGTACTGATGGCAAGTTTATTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACATAGTGACTGTCATGATGACTGAAACAAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCAGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGCTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGCGCTCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCAACCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTTCGCAGTTCCTTCCTCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTTCTCCCAAATTTGAAGGTTCTCACGCGCTCCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGCTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAAGGTTCTCACGCGCTCCGCTGCTGCAGTTCATTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCATGCGTTTCGCTGCAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTTAAAGTTCTCAAAGGTTCTCACGCGAGGTTCTTATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTGACGCTGCGCTGCTTCCTTCACCACGTTCGAAGGTTCTTACGCTGCACTGCTTCGCTGTTCCTTCTCCAAATTCGAAGGTTCTCATGCTACGCTAG

Protein sequence

MNNFYTGSTTYCCFNEMRLQEDKAPIIASGEITLQGACTDGKFIVKYNPLFEPDSDIVTVMMTETRTMEERMAEMQEHINTLMKAGEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPSTSVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSLKFAVPSSQVRRFSRASLQFLSPKFEGSHALRCSSFLQVRRLSRAPLQFLPPSSKVLTRSAAVPSSKFERFSRAPLLQFIPPSSKVLTRFAAVPSPQVRRFSCVSLQFLLPKFEGSHALRCSSFLKVLKGSHARFLCALLQFLLSKFEGSDAALLPSPRSKVLTLHCFAVPSPNSKVLMLR
Homology
[Close]
BLAST of Spg017418 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 139.0 bits (349), Expect = 8.3e-29
Identity = 79/116 (68.10%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR SVFQR+SMA  EEENQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 129 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 188

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ S  PSRMKRK SV INTEGSL
Sbjct: 189 SAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

[Close]
BLAST of Spg017418 vs. NCBI nr
Match: TYK16519.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-28
Identity = 78/116 (67.24%), Postives = 89/116 (76.72%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR  VFQR+SMA  EEENQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 400 KQRTSVFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 459

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q KR+M + + K F E N D K+ S  PSRMKRK SV INTEGSL
Sbjct: 460 SAFDRLKMTNNQQKREMKSFKAKPFHEQNDDNKIHSRVPSRMKRKLSVDINTEGSL 515

[Close]
BLAST of Spg017418 vs. NCBI nr
Match: TYK08944.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 5.4e-28
Identity = 77/116 (66.38%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 546 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSISTSKKHRPST 605

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ +  PSRMKRK SV INTEGSL
Sbjct: 606 STFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDINTEGSL 661

[Close]
BLAST of Spg017418 vs. NCBI nr
Match: KAA0055462.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 5.4e-28
Identity = 77/116 (66.38%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 546 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSISTSKKHRPST 605

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ +  PSRMKRK SV INTEGSL
Sbjct: 606 STFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDINTEGSL 661

[Close]
BLAST of Spg017418 vs. NCBI nr
Match: KAA0050734.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 5.4e-28
Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTS+FDRIKP TTR  VFQR+SMA  EEENQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 70  KQRTSIFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 129

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ S  PSRMKRK SV INTEGSL
Sbjct: 130 SAFDRLKMTNDQQQREMKSLKAKPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Spg017418 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-29
Identity = 79/116 (68.10%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR SVFQR+SMA  EEENQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 129 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 188

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ S  PSRMKRK SV INTEGSL
Sbjct: 189 SAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

[Close]
BLAST of Spg017418 vs. ExPASy TrEMBL
Match: A0A5D3D209 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003310 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28
Identity = 78/116 (67.24%), Postives = 89/116 (76.72%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR  VFQR+SMA  EEENQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 400 KQRTSVFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 459

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q KR+M + + K F E N D K+ S  PSRMKRK SV INTEGSL
Sbjct: 460 SAFDRLKMTNNQQKREMKSFKAKPFHEQNDDNKIHSRVPSRMKRKLSVDINTEGSL 515

[Close]
BLAST of Spg017418 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTS+FDRIKP TTR  VFQR+SMA  EEENQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 70  KQRTSIFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPST 129

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ S  PSRMKRK SV INTEGSL
Sbjct: 130 SAFDRLKMTNDQQQREMKSLKAKPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Spg017418 vs. ExPASy TrEMBL
Match: A0A5A7UI09 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00340 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 77/116 (66.38%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 546 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSISTSKKHRPST 605

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ +  PSRMKRK SV INTEGSL
Sbjct: 606 STFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDINTEGSL 661

[Close]
BLAST of Spg017418 vs. ExPASy TrEMBL
Match: A0A5D3CCI8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00350 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 77/116 (66.38%), Postives = 91/116 (78.45%), Query Frame = 0 

Query: 87  EQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSTSARPSAFQRLSVSTSKKSQPST 146
           +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  ST AR SAF+RLS+STSKK +PST
Sbjct: 546 KQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSISTSKKHRPST 605

Query: 147 SVFYRLKVTSAQPKRKMDNLEVKLFDEVNSDKKLQSSNPSRMKRKFSVLINTEGSL 203
           S F RLK+T+ Q +R+M +L+ K F E N D K+ +  PSRMKRK SV INTEGSL
Sbjct: 606 STFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDINTEGSL 661

The following BLAST results are available for this feature:
BLAST of Spg017418 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044978.18.3e-2968.10retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK16519.13.1e-2867.24retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK08944.15.4e-2866.38retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0055462.15.4e-2866.38retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0050734.15.4e-2866.38gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease pol... [more]
BLAST of Spg017418 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg017418 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TQ064.0e-2968.10Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3D2091.5e-2867.24Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3BBF92.6e-2866.38Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7UI092.6e-2866.38Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3CCI82.6e-2866.38Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
BLAST of Spg017418 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg017418.1Spg017418.1mRNA