Spg017398 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017398
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	UPF0057 membrane protein
Location	scaffold4: 43172079 .. 43172898 (-)
RNA-Seq Expression	Spg017398
Synteny	Spg017398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAAATCAAGCACTTCCTTCCACAACTCTCTCAACTCTCTCTTGAAGATCGAAAATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTCGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTAATCTTCACTCTTCTTCCATCTCTCTCTGTAATTTCCCCCAATCTGAACTTCCGGTGACCTAGAACAGCCGAAGAAAGAAATTTCGCCGGCAATCTGATCGAAAATCGACGACCGCGATCGGAATTAGTTTTTGGTTTCAGTTTCGGTCTGATTTTTGTGTGGAAATTGGTGCAATTGCAGGTGGAGTTTTGTCTCTGTTTGATTTTGACTCTGCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCGTCTTCGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCGCCGGTGACCTCGGTGTAGAGCCAGTTTGAATCTCTTCTTCACTCTGTTTTAATTTTTCGAATAAGGTCTTTAACTGTTTCGTTCATAATGTAGCTTTTGGATATTGGACTGGATTGGATTTGATCTACGTAGATTTGTGAGGCTTTCTGTTCTTGTTTTTGCTTGATTTGGATGTGCGTGTGAGAACTTAGAGCTTTTGAATCACGTTGATGCCGATGAAATTTGAAACAAATCGGAACTCATGAAGTGTCGGCAATGGCGTTTGGATTTTTTTGTGGTTAGAACTGGTCAAGGCGTGAGTTTTTAGTGGAATCTTATAGAAATATGGAACTATAAAATGTGGACAATGTTGTTGGGGGAAA

mRNA sequence

ATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTCGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAGTTTTGTCTCTGTTTGATTTTGACTCTGCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCGTCTTCGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCGCCGGTGACCTCGGTGTAG

Coding sequence (CDS)

ATGGCGAACGGATGTGAGATCTGCTGCGAGATTCTCATCGCCATCCTCATTCCTCCTCTCGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAGTTTTGTCTCTGTTTGATTTTGACTCTGCTCGGTTACATTCCGGGGATCATCTACGCACTCTACGCCATCGTCTTCGTCGATCGCGACCAGTTCTTCGACGAGTACAGGCGTCCGCTCTATTCGCCGGTGACCTCGGTGTAG

Protein sequence

MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDRDQFFDEYRRPLYSPVTSV

Homology

[Close]

BLAST of Spg017398 vs. NCBI nr
Match: XP_038890692.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          DQFFDEYRRPLY+P ++V
Sbjct: 61 DQFFDEYRRPLYAPASTV 78

[Close]

BLAST of Spg017398 vs. NCBI nr
Match: XP_022158160.1 (UPF0057 membrane protein At2g24040-like [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 3.9e-34
Identity = 73/78 (93.59%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYALYAIVFVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          DQFFDEYRRPLY+PV++V
Sbjct: 61 DQFFDEYRRPLYAPVSAV 78

[Close]

BLAST of Spg017398 vs. NCBI nr
Match: XP_022946545.1 (UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF0057 membrane protein At2g24040-like [Cucurbita maxima] >XP_023523032.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >XP_023546587.1 UPF0057 membrane protein At2g24040-like [Cucurbita pepo subsp. pepo] >KAG6599143.1 UPF0057 membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030086.1 UPF0057 membrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150.2 bits (378), Expect = 7.3e-33
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV+VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          DQFFDEYRRPLYS  ++V
Sbjct: 61 DQFFDEYRRPLYSQASAV 78

[Close]

BLAST of Spg017398 vs. NCBI nr
Match: XP_011648896.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN61055.1 hypothetical protein Csa_021360 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI FVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSPVTS 78
          DQFFDEYRRPLYS V++
Sbjct: 61 DQFFDEYRRPLYSSVSA 77

[Close]

BLAST of Spg017398 vs. NCBI nr
Match: XP_022938010.1 (UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022938011.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >KAG6586050.1 UPF0057 membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020827.1 UPF0057 membrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDR
Sbjct: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          D FFDEYRRPLYSPV +V
Sbjct: 61 DHFFDEYRRPLYSPVPTV 78

[Close]

BLAST of Spg017398 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26
Identity = 53/72 (73.61%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MA+ CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQFFDEYRRPLY 73
          D++FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Spg017398 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-25
Identity = 51/73 (69.86%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYS 74
          +++FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Spg017398 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.8e-19
Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg017398 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.9e-17
Identity = 42/68 (61.76%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1  MANG-CEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVD 60
          MA+G C    EIL+AI++PPLGV L+FGCC++EFC+CL+LT+LGY+PGIIYA+Y +V +D
Sbjct: 1  MASGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALD 60

Query: 61 RDQFFDEY 68
           DQ+  EY
Sbjct: 61 SDQYQREY 68

[Close]

BLAST of Spg017398 vs. ExPASy Swiss-Prot
Match: A2Y075 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-10
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 4  GCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAI 56
          G   C +ILIAI++PPLGV LKFG C  EF +CL+LT LGYIPGIIYA+YAI
Sbjct: 3  GTANCIDILIAIILPPLGVFLKFG-CGHEFWICLLLTFLGYIPGIIYAIYAI 53

[Close]

BLAST of Spg017398 vs. ExPASy TrEMBL
Match: A0A6J1DV17 (UPF0057 membrane protein At2g24040-like OS=Momordica charantia OX=3673 GN=LOC111024708 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34
Identity = 73/78 (93.59%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYALYAIVFVDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYVPGIIYALYAIVFVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          DQFFDEYRRPLY+PV++V
Sbjct: 61 DQFFDEYRRPLYAPVSAV 78

[Close]

BLAST of Spg017398 vs. ExPASy TrEMBL
Match: A0A6J1KI35 (UPF0057 membrane protein At2g24040-like OS=Cucurbita maxima OX=3661 GN=LOC111494032 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.5e-33
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV+VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          DQFFDEYRRPLYS  ++V
Sbjct: 61 DQFFDEYRRPLYSQASAV 78

[Close]

BLAST of Spg017398 vs. ExPASy TrEMBL
Match: A0A6J1G463 (UPF0057 membrane protein At2g24040-like OS=Cucurbita moschata OX=3662 GN=LOC111450578 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.5e-33
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV+VDR
Sbjct: 1  MANGCEICCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          DQFFDEYRRPLYS  ++V
Sbjct: 61 DQFFDEYRRPLYSQASAV 78

[Close]

BLAST of Spg017398 vs. ExPASy TrEMBL
Match: A0A0A0LGN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036040 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.1e-33
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI FVDR
Sbjct: 1  MVNGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYVPGIIYAVYAIAFVDR 60

Query: 61 DQFFDEYRRPLYSPVTS 78
          DQFFDEYRRPLYS V++
Sbjct: 61 DQFFDEYRRPLYSSVSA 77

[Close]

BLAST of Spg017398 vs. ExPASy TrEMBL
Match: A0A6J1FBZ3 (UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC111444230 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALY+IVFVDR
Sbjct: 1  MANGCEIFCEILIAILIPPLGVCLKHGCCTVEFCLCLILTLLGYIPGIIYALYSIVFVDR 60

Query: 61 DQFFDEYRRPLYSPVTSV 79
          D FFDEYRRPLYSPV +V
Sbjct: 61 DHFFDEYRRPLYSPVPTV 78

[Close]

BLAST of Spg017398 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-32
Identity = 63/72 (87.50%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MANGCEICCEI+IAILIPPLGVCL+ GCCT EF +CLILTLLGY+PGIIYALYAIV+VDR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DQFFDEYRRPLY 73
          DQFFDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of Spg017398 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 120.2 bits (300), Expect = 7.6e-28
Identity = 53/72 (73.61%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MA+ CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DQFFDEYRRPLY 73
          D++FDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of Spg017398 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-26
Identity = 51/73 (69.86%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYS 74
          +++FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Spg017398 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-26
Identity = 51/73 (69.86%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DQFFDEYRRPLYS 74
          +++FDEYRRP+YS
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of Spg017398 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 95.5 bits (236), Expect = 2.0e-20
Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 1  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFVDR 60
          MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Spg017398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890692.1	1.3e-34	94.87	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
XP_022158160.1	3.9e-34	93.59	UPF0057 membrane protein At2g24040-like [Momordica charantia]	[more]
XP_022946545.1	7.3e-33	92.31	UPF0057 membrane protein At2g24040-like [Cucurbita moschata] >XP_022999789.1 UPF...	[more]
XP_011648896.1	1.2e-32	90.91	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN61055.1 hypothetical pr...	[more]
XP_022938010.1	3.6e-32	92.31	UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022938011.1 UPF...	[more]

BLAST of Spg017398 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82232	1.1e-26	73.61	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9SUI0	2.6e-25	69.86	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
Q9M095	2.8e-19	75.41	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	5.9e-17	61.76	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
A2Y075	1.4e-10	69.23	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 S...	[more]

BLAST of Spg017398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DV17	1.9e-34	93.59	UPF0057 membrane protein At2g24040-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KI35	3.5e-33	92.31	UPF0057 membrane protein At2g24040-like OS=Cucurbita maxima OX=3661 GN=LOC111494...	[more]
A0A6J1G463	3.5e-33	92.31	UPF0057 membrane protein At2g24040-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0LGN1	6.1e-33	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036040 PE=3 SV=1	[more]
A0A6J1FBZ3	1.8e-32	92.31	UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Spg017398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28088.1	1.3e-32	87.50	Low temperature and salt responsive protein family	[more]
AT2G24040.1	7.6e-28	73.61	Low temperature and salt responsive protein family	[more]
AT4G30660.1	1.9e-26	69.86	Low temperature and salt responsive protein family	[more]
AT4G30660.2	1.9e-26	69.86	Low temperature and salt responsive protein family	[more]
AT4G30650.1	2.0e-20	75.41	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 8..56 e-value: 4.6E-16 score: 58.8
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF93	BNAA03G50460D PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017398.1	Spg017398.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane