Spg017367 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGCGCTCTCTCGACTCGAGCTCAAGGTCTCAAAGCAACTCCAAGGGCTGCGATTGTGTATCCTTCACCTTCTGCGCGAACTTCAGCTTCCCATTTGTCGCTCTTCAAGGTCGGTTTCTGGATTCTTGTTTGTAATCTTGAGCAATTTCTTTGTTCGTTTGGGTAAATTTTAGTTATGCAACTGACGGGCTGATACTCTTCGAAACAGAGTTCGTTCTTCAGAGGTCAATTTTGTTGCCGGCGCTTTCTTCGATTGAATTCAAATTTTACTCGTACGCGTCATATAGGTAGCATTTCTGGATTTCACTTTTACGATGATCCATGACGAAAATGAAAATTGGGCTATTCTTGGAGTTATAAGATGATGTTTTAGTTAGTTGAACTGATTTAAATGCAAAAGTTTTGAGTAAAAAGATCATTTAGCAGTGTTACAAGCAACTTCTCTTCCAAATTTGTAGTAAATTCTTAGAACTTGAGCAATTTGGTTTGTGCCAATTTGATGGAGTCTATCCAGTATCCAAGGGTTCACAAAAAATTTCTTCTATCCATCCTAATACTAAGGCCCTATGCATAGAGAAACCACCAACTAACTAAAGTTAGTAAGAAACTAAAACAATTGCACCCAAATAACTGTTTAACAAACAAGCTAATTAACAAATTCTCTAACTCATTACATCACAATCTATGCAATGTGGTTAGTTTTTACTCCAATTTGATTGGATTTTGTGGGTTTTGTGTTGCTAAGGGAGTGTGGTGGTATCACCCAGTTGTGTTCTGCCATTGACTGAGGAAAATGTGGAGAAGGTGTTGGATGAGGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACAATGACACTGAAAATGGGAATTGAGACCAGACTCAGAGACAAGATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAATGAGGAAAATGTTGAAAAGGTAAAGAGTCTCTCAATTCAATTTTCAGCCATGTAGAAAGGAATTTAAAAACACTTGCATAGATGATCATAGAATTGTTTTGCAAGAACTCAACTGACAGAAGAAGCATGCTTACATAGATGATCATAGAATTTTCATCTATCTAGATATAAATGTTCTAATATATTTCTAAATTCTACACTGCTGCTTATCCATATAGGCATCTTAGGTTGGTGGTAATTTAACAAACTGAAAACTTATCCATTGGAAAGAGAAGTCATTTTACAATCAATCTTTACAGAGATTTTCTATCTGTTTGTTCTGCAAACAATATGAGTGTGGTTTTTTTATGATTTCATTTTGGTTGGTGCTGAGGACAATTGAGAGAGAACAAGAAAACGATTATGTTTCATTGAATACTTAATTGATCTAGAAGCATGACATATAATAGCCTATTTATACCAACAAGATATGAGTAAACAACCAATCTACCCATAGGAGAGAAACTTCAAACCAATTCGAAAAAAAACCTATGGACATCTGAATACCAAATGGGTTTCCACAAAAAGTTGCCCAAAGGCACATAAGATTAAACGAAAAGAGATTTGGGCTTTGAAGTGTTTTCATAAACTTTCTGTACCCCATTTGTTTCTAGTGTGTTTGCTCCACTAGGAAGAAAAGAAATGAGAAGATGAAGGATAAAAGTGTTTGTTTTTTAGCTACTTGCAGAGATTAGGCCATACTTGGCAGGCACAGGAGGTGGAATTTTGGAACTTATGGAGATAAAAGATTATGTTGTTAAGGTGCGGCTAAGTGGACCTGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATTCCAGCCATTGCAGCTGTTCAGCTTGTAGAGTAGCAGCAGCTTTGAAGTGAAAGTGAAGTTTTACTTGCTCATATACTCAATAGATGCTGAGTTAAAGTTGTGACATCTTTTTCTCTTTCTTTTACTTCATTTTTTTTATTTTTACAATTGTAATCAGGTTGGTGGTGAATGTTGAGAATGGAGAAATATGTAGAGTTTTTTTTTTGGTTGGCATTTTCTGTTGTAGCCATTGTTGGATGTTGGAATTTCTCTCATTAATTTATTATACAGAGAGGCAGAGAAAGTGCAAATGAAAATTGAAAAAAGAGAAAAGGAAAAACCTTTCCGTTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAG ATGGTGGGCGCTCTCTCGACTCGAGCTCAAGGTCTCAAAGCAACTCCAAGGGCTGCGATTGTGTATCCTTCACCTTCTGCGCGAACTTCAGCTTCCCATTTGTCGCTCTTCAAGGTCGGTTTCTGGATTCTTGTTTGTAATCTTGAGCAATTTCTTTGTTCGTTTGGTGTGGTGGTATCACCCAGTTGTGTTCTGCCATTGACTGAGGAAAATGTGGAGAAGGTGTTGGATGAGGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACAATGACACTGAAAATGGGAATTGAGACCAGACTCAGAGACAAGATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAATGAGGAAAATGTTGAAAAGCTACTTGCAGAGATTAGGCCATACTTGGCAGGCACAGGAGGTGGAATTTTGGAACTTATGGAGATAAAAGATTATGTTGTTAAGGTGCGGCTAAGTGGACCTGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATTCCAGCCATTGCAGCTGTTCAGCTTGTAGAGTAG ATGGTGGGCGCTCTCTCGACTCGAGCTCAAGGTCTCAAAGCAACTCCAAGGGCTGCGATTGTGTATCCTTCACCTTCTGCGCGAACTTCAGCTTCCCATTTGTCGCTCTTCAAGGTCGGTTTCTGGATTCTTGTTTGTAATCTTGAGCAATTTCTTTGTTCGTTTGGTGTGGTGGTATCACCCAGTTGTGTTCTGCCATTGACTGAGGAAAATGTGGAGAAGGTGTTGGATGAGGTAAGGCCAAGCCTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGCTCTTGCCCAAGCTCAACAATGACACTGAAAATGGGAATTGAGACCAGACTCAGAGACAAGATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAATGAGGAAAATGTTGAAAAGCTACTTGCAGAGATTAGGCCATACTTGGCAGGCACAGGAGGTGGAATTTTGGAACTTATGGAGATAAAAGATTATGTTGTTAAGGTGCGGCTAAGTGGACCTGCAGCTGGAGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATTCCAGCCATTGCAGCTGTTCAGCTTGTAGAGTAG MVGALSTRAQGLKATPRAAIVYPSPSARTSASHLSLFKVGFWILVCNLEQFLCSFGVVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKLLAEIRPYLAGTGGGILELMEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLVE Homology
BLAST of Spg017367 vs. NCBI nr
Match: XP_022929559.1 (nifU-like protein 3, chloroplastic [Cucurbita moschata] >KAG6598879.1 NifU-like protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89 Identity = 188/227 (82.82%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. NCBI nr
Match: KAG7029821.1 (NifU-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89 Identity = 188/227 (82.82%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. NCBI nr
Match: XP_022997561.1 (nifU-like protein 3, chloroplastic [Cucurbita maxima] >XP_023545672.1 nifU-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 339.0 bits (868), Expect = 3.1e-89 Identity = 188/227 (82.82%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. NCBI nr
Match: XP_038889481.1 (nifU-like protein 3, chloroplastic [Benincasa hispida]) HSP 1 Score: 338.2 bits (866), Expect = 5.3e-89 Identity = 188/227 (82.82%), Postives = 197/227 (86.78%), Query Frame = 0
BLAST of Spg017367 vs. NCBI nr
Match: TYK01397.1 (nifU-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 335.5 bits (859), Expect = 3.4e-88 Identity = 186/227 (81.94%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy Swiss-Prot
Match: Q84RQ7 (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 7.0e-68 Identity = 131/158 (82.91%), Postives = 150/158 (94.94%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy Swiss-Prot
Match: Q93W20 (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.1e-60 Identity = 131/222 (59.01%), Postives = 161/222 (72.52%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy Swiss-Prot
Match: Q84LK7 (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIFU1 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.6e-51 Identity = 107/153 (69.93%), Postives = 126/153 (82.35%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy Swiss-Prot
Match: Q93W77 (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.1e-18 Identity = 54/141 (38.30%), Postives = 88/141 (62.41%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy Swiss-Prot
Match: P33179 (Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 GN=nifU PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15 Identity = 43/69 (62.32%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy TrEMBL
Match: A0A6J1EP39 (nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 8.8e-90 Identity = 188/227 (82.82%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy TrEMBL
Match: A0A6J1K7T6 (nifU-like protein 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492451 PE=3 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.5e-89 Identity = 188/227 (82.82%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy TrEMBL
Match: A0A5D3BPX3 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00910 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.7e-88 Identity = 186/227 (81.94%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy TrEMBL
Match: A0A5A7U598 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00030 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.2e-88 Identity = 185/227 (81.50%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. ExPASy TrEMBL
Match: A0A1S3BRP8 (nifU-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492775 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.2e-88 Identity = 185/227 (81.50%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Spg017367 vs. TAIR 10
Match: AT4G25910.1 (NFU domain protein 3 ) HSP 1 Score: 258.5 bits (659), Expect = 5.0e-69 Identity = 131/158 (82.91%), Postives = 150/158 (94.94%), Query Frame = 0
BLAST of Spg017367 vs. TAIR 10
Match: AT5G49940.1 (NIFU-like protein 2 ) HSP 1 Score: 233.0 bits (593), Expect = 2.2e-61 Identity = 131/222 (59.01%), Postives = 161/222 (72.52%), Query Frame = 0
BLAST of Spg017367 vs. TAIR 10
Match: AT5G49940.2 (NIFU-like protein 2 ) HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35 Identity = 86/161 (53.42%), Postives = 106/161 (65.84%), Query Frame = 0
BLAST of Spg017367 vs. TAIR 10
Match: AT4G01940.1 (NFU domain protein 1 ) HSP 1 Score: 92.8 bits (229), Expect = 3.6e-19 Identity = 54/141 (38.30%), Postives = 88/141 (62.41%), Query Frame = 0
BLAST of Spg017367 vs. TAIR 10
Match: AT1G51390.1 (NFU domain protein 5 ) HSP 1 Score: 56.2 bits (134), Expect = 3.7e-08 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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