Spg017196 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017196
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PSI subunit V
Location	scaffold4: 37915208 .. 37917269 (+)
RNA-Seq Expression	Spg017196
Synteny	Spg017196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATTTCTAAGGATTTCTCTAATTAAAATAGTCATCTTGAAATTTCGTGACCATTATATATAAATCTTAATAGTCCAAAGACCAAAAACATTGAGACCTCCCATTTTTCAATTCTCCAAATAGAGAGAGCCAAATCTAAATCTTCGATACCCACATGCTCAGCCCATCTATCTTGAGAGAGAGAGACCCAAATCCAAATCTTTCAAACCCACATGGCCTAGCCCATTCTCTTGAGAGAAAGAGAGAGAGGAGAGAGAACCAAATTCATTTCTCTCATTTTCTCATGAGAGAGAGAAATGGATAAGGGATAAGGTTATGTGACAAGTTCCATCCAATGAGAAGAGAGAGGTTCGATCAACCACAGCCTCCCACAAATTTCCATGGCCAACAACAATATACTAACCCCCAAAACCAAATCTAAAAATCTCACCTCATTCTTCTTCTCTGCCACTGATCCTTTCACAAGCCAAAGGCAGCAGAAGCAACAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTAAGTTCCAGCTTCGCTTCGTCGAACACCAGAGCTTTGATCTCCCCCAAAGGCCTCTCCGCCTCGCCGCTCCGACGCATCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGGTAAACCAACCCCATTTCCCAAATCTACATAATAATCTGCCTCTCTTTGAGCTTTCAAGATATATATATATATATATAGTAAGTTATGTGTACTATTTCAAGGGATACAAACCTAAGATCTCTAAAAGTAGAGTAAGAATTGAATGATATCAACAAATTATTTGTATAAAAGTTTAACAGGTGTGTTTGGTAGTGCTTTTACCTGAAGTACTTCAACTTCAATAATAATATACTTTTAGTTAGAAATATTAGTAATCGATGAACTACTAAAATTAAAATAACTATATTATAAAAGCATTACAAAAATGTAAAAAAATAATATTATAAGAAAATGAAATAAGTAGGTGGAGAAAGATTAGTAAGAGGAAAAAACAAGTGTGTCCAGAGATTAAGAATAAAGTATCAAAGTCCAATACAAACATGTCATGCTTCTTTGAAAAGCACTTCTCCACATGTTAATAACCCCTATTGAAACTGTTGCAGCCAACTTACCAAGTGATCCAGCCCATCAATGGAGACCCATTCATTGGAAGCCTCGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTACCTCTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTGCTTCTCGTCGGCCCATTTGTTAAAGCTGGGCCCCTAAGGAACACAGCCTACGCCGGAGGAGCCGGCTCACTGGCTGCCGGCGGTCTCATTGTCATCCTGAGCATCTGTATGACAATGTATGGCATTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCATTGACCTTGACCGGTAGGAAGAAGGCCCCAGATCAGCTGCAAACAGCCGATGGGTGGGCGAAATTCACCGGCGGGTTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTTCCTTACTACGTCAAGTAGATTTTGTATCATTTTCTGTTTCTACAATGCAACTTCCATGTCTGTGTTAAGGAAACATAAAATTGTATATTTCATGCCAAACCTCTTTGTTAGATCCATTGTGATCGCTTATTGATTTTCCTTTTGTTCCCACCTTCCATTTGCTTCTTCACAAACTATAGCTTCTGTGACTGCTCTATAAATTGGAGGGAGAATAATATCAACATACTATACTTTTCTGTCATCAGAAGAGTAACATACAGAAGTTATCAGGAAAGAAATGAAAACAAAACGAATGGTGATTAGCTTTCCTAATTATGGACAAACATTCACCTTGTCATGGGTGCAGGTGATTGAGAAATCTTCCACATGTTCACAATTTAAATTTTCTTCCCTTGCGTTTATTGTACATGCCTCTAAGCACTCAGAAGGATGTTAAAATTCCTAGAGTTTCA

mRNA sequence

ATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTAAGTTCCAGCTTCGCTTCGTCGAACACCAGAGCTTTGATCTCCCCCAAAGGCCTCTCCGCCTCGCCGCTCCGACGCATCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCAACTTACCAAGTGATCCAGCCCATCAATGGAGACCCATTCATTGGAAGCCTCGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTACCTCTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTGCTTCTCGTCGGCCCATTTGTTAAAGCTGGGCCCCTAAGGAACACAGCCTACGCCGGAGGAGCCGGCTCACTGGCTGCCGGCGGTCTCATTGTCATCCTGAGCATCTGTATGACAATGTATGGCATTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCATTGACCTTGACCGGTAGGAAGAAGGCCCCAGATCAGCTGCAAACAGCCGATGGGTGGGCGAAATTCACCGGCGGGTTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTTCCTTACTACGTCAAGTAG

Coding sequence (CDS)

ATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTAAGTTCCAGCTTCGCTTCGTCGAACACCAGAGCTTTGATCTCCCCCAAAGGCCTCTCCGCCTCGCCGCTCCGACGCATCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCAACTTACCAAGTGATCCAGCCCATCAATGGAGACCCATTCATTGGAAGCCTCGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTACCTCTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTGCTTCTCGTCGGCCCATTTGTTAAAGCTGGGCCCCTAAGGAACACAGCCTACGCCGGAGGAGCCGGCTCACTGGCTGCCGGCGGTCTCATTGTCATCCTGAGCATCTGTATGACAATGTATGGCATTGCATCCTTCAATGAAGGAGAGCCATCCACTGCACCATCATTGACCTTGACCGGTAGGAAGAAGGCCCCAGATCAGCTGCAAACAGCCGATGGGTGGGCGAAATTCACCGGCGGGTTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTTCCTTACTACGTCAAGTAG

Protein sequence

MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK

Homology

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BLAST of Spg017196 vs. NCBI nr
Match: XP_022149833.1 (photosystem I reaction center subunit XI, chloroplastic [Momordica charantia])

HSP 1 Score: 413.7 bits (1062), Expect = 9.9e-112
Identity = 210/217 (96.77%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKKAPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Spg017196 vs. NCBI nr
Match: XP_008441854.1 (PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Spg017196 vs. NCBI nr
Match: XP_038889551.1 (photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida])

HSP 1 Score: 409.5 bits (1051), Expect = 1.9e-110
Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKNPDPLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Spg017196 vs. NCBI nr
Match: XP_022997609.1 (photosystem I reaction center subunit XI, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASS TRAL++PKGLS SPLRRIPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSTTRALVAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG LLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLI ILSIC+TMYGIASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIAILSICLTMYGIASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Spg017196 vs. NCBI nr
Match: XP_022965497.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima])

HSP 1 Score: 408.3 bits (1048), Expect = 4.2e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Spg017196 vs. ExPASy Swiss-Prot
Match: Q39654 (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-112
Identity = 206/217 (94.93%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+C+TMYG+ASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Spg017196 vs. ExPASy Swiss-Prot
Match: Q41385 (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAL PE=1 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.5e-91
Identity = 171/219 (78.08%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPA--RTHSFTIRAIQADKPTYQ 60
           MA  TSP+ASQL S F    T+AL+ PKG+S   LR  P+  R  SFT+RAI+ +KPTYQ
Sbjct: 1   MAATTSPMASQLKSGF---TTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFV 120
           VIQP+NGDPFIG LETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHG LLVGPFV
Sbjct: 61  VIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQ 180
           KAGPLRNT YAG AGSLAA GL+VILS+C+TMYGIASF EGEPS AP+LTLTGRKK PDQ
Sbjct: 121 KAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQ+ADGWAKFTGGFFFGG+SGV WA FL+YVLDLPYY K
Sbjct: 181 LQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216

[Close]

BLAST of Spg017196 vs. ExPASy Swiss-Prot
Match: Q9SUI4 (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAL PE=1 SV=2)

HSP 1 Score: 336.3 bits (861), Expect = 2.6e-91
Identity = 170/219 (77.63%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRIPA-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHG  LVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQ 180
           KAGPLRNTAYAG AGSLAA GL+VILS+C+T+YGI+SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQTADGWAKFTGGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

[Close]

BLAST of Spg017196 vs. ExPASy Swiss-Prot
Match: P23993 (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAL PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-79
Identity = 153/218 (70.18%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 1   MATA-TSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQV 60
           MATA   P+ASQ+  S       A   P+G+S + L R P     F ++A+++DKPTYQV
Sbjct: 1   MATAYAPPMASQVMKS-----GLACSKPRGMSGASLTRRP----RFVVKAVKSDKPTYQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVK 120
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG LLVGPF  
Sbjct: 61  VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 120

Query: 121 AGPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQL 180
            GPLRNT   G AG+L A GL+ ILS+C+TMYG+ASFNEGEPSTAP LTLTGRKK  D+L
Sbjct: 121 TGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKL 180

Query: 181 QTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           QTA+GW++FTGGFFFGG+SG +WAYFLLYVLDLPY+ K
Sbjct: 181 QTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209

[Close]

BLAST of Spg017196 vs. ExPASy Swiss-Prot
Match: Q6B8P4 (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui OX=285951 GN=psaL PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33
Identity = 74/148 (50.00%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 60  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVK 119
           IQ  N DPF+G+L TPV++S      L+NLPAYR  +SPLLRG+E+G+AHG  LVGPF K
Sbjct: 5   IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64

Query: 120 AGPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQL 179
            GPLRNT  A  +G L+A GLI+IL++C++MYG  SF++ +              A D L
Sbjct: 65  LGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDD--------------AKDLL 124

Query: 180 QTADGWAKFTGGFFFGGISGVIWAYFLL 208
           QT +GW +FT GF  G + G  +AY LL
Sbjct: 125 QTTEGWGQFTAGFLVGAVGGSGFAYLLL 138

[Close]

BLAST of Spg017196 vs. ExPASy TrEMBL
Match: A0A6J1D7U0 (PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.8e-112
Identity = 210/217 (96.77%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKKAPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Spg017196 vs. ExPASy TrEMBL
Match: A0A1S3B555 (PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.3e-111
Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Spg017196 vs. ExPASy TrEMBL
Match: A0A6J1KBZ8 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111492490 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASS TRAL++PKGLS SPLRRIPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSTTRALVAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG LLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLI ILSIC+TMYGIASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIAILSICLTMYGIASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Spg017196 vs. ExPASy TrEMBL
Match: A0A6J1HKH3 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Spg017196 vs. ExPASy TrEMBL
Match: A0A0A0LHJ8 (PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 207/217 (95.39%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG  LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+C+TMYG+ASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Spg017196 vs. TAIR 10
Match: AT4G12800.1 (photosystem I subunit l )

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-92
Identity = 170/219 (77.63%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRIPA-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGLLLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHG  LVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICMTMYGIASFNEGEPSTAPSLTLTGRKKAPDQ 180
           KAGPLRNTAYAG AGSLAA GL+VILS+C+T+YGI+SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQTADGWAKFTGGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

The following BLAST results are available for this feature:

BLAST of Spg017196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149833.1	9.9e-112	96.77	photosystem I reaction center subunit XI, chloroplastic [Momordica charantia]	[more]
XP_008441854.1	1.1e-110	96.31	PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo...	[more]
XP_038889551.1	1.9e-110	96.31	photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida]	[more]
XP_022997609.1	2.4e-110	95.85	photosystem I reaction center subunit XI, chloroplastic-like [Cucurbita maxima]	[more]
XP_022965497.1	4.2e-110	94.93	photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima]	[more]

BLAST of Spg017196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39654	2.1e-112	94.93	Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q41385	1.5e-91	78.08	Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=...	[more]
Q9SUI4	2.6e-91	77.63	Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana ...	[more]
P23993	1.4e-79	70.18	Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=45...	[more]
Q6B8P4	9.5e-33	50.00	Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui ...	[more]

BLAST of Spg017196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7U0	4.8e-112	96.77	PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1	[more]
A0A1S3B555	5.3e-111	96.31	PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1	[more]
A0A6J1KBZ8	1.2e-110	95.85	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111492490 PE=3 SV=1	[more]
A0A6J1HKH3	2.0e-110	94.93	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1	[more]
A0A0A0LHJ8	2.0e-110	95.39	PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1	[more]

BLAST of Spg017196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12800.1	1.9e-92	77.63	photosystem I subunit l	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	GENE3D	1.20.1240.10	Photosystem I PsaL, reaction centre subunit XI	coord: 54..217 e-value: 1.4E-71 score: 241.2
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	SUPERFAMILY	81568	Photosystem I reaction center subunit XI, PsaL	coord: 60..216
IPR003757	Photosystem I PsaL, reaction centre subunit XI	PFAM	PF02605	PsaL	coord: 59..211 e-value: 5.1E-57 score: 191.7
IPR022980	Photosystem I, reaction centre subunit XI	PANTHER	PTHR34803	FAMILY NOT NAMED	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017196.1	Spg017196.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I