Spg017168 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGCTGAATCAGCTGCAAGTGAATTTGCATGGGGCAATGCTCTAAAAAAGAAGCTTCTTCAAAGAGATCAATTAGTTGGCAATAATGGAAACAATAATGGTGGTTTTGATTTCTCTCTCCAAACAGTGAAATTTTCTCAAGAAAATCTAGAGAGAGAAGAAGAAGAAGATCAAGAAGAAGAGAAAAAGATGGAGAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAGTGGAGATGATGATGATTCTAATAATGGAGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGATAATACAAACACAAATTGATTTTTTTTTTCTTTCTTTCTTTTTAGTTTCTATGTGGAAAAGAAATTAAAGAAGCAAAATATATGAATTTGCAGGTATTAATTGTGTCACATTTAGTTTCTTTTTACATTGTAATTATTTTCTTTTTTTTGAACCACAGATATTGTGGTTATCAGTACAACTTTATGCTAGTTGAGCTAAACTCTTGTTGGCTTGGGAGTGACGTTTATACTTCAATTTAATTTACGTTCATAGATAATGGATCTCAAAATAAAATGGAAGGAGTGGGTAGAATGAAAATAATTCTCGTAGTACTACTATACTAGTCATTTACTTCCTTCATTAATGTTTAGCTACATGAATAGTTGAAATTTTAATTGTACTACGTCGGTCCTACATTTATTCTGAAATACTTGATGAAGTTTACTCGATAGTTAGACCCAATAATTTTTTTTTTAAACTCTAGAGTAATAGTAGACGTGGTTACACTCTCGAAGAAAAAAAAAAATTGACTTCGAAAACCAACTATGAAAATATCATGATTTGAATCTAACTATAATGATGTATCAAAAATATGAAAAATGTGGAGTTCCAAATTTTTTTTATGTTTCTTATCCAATTTGAAATGACAAATGTATAAAAATTAAGGACCGTTTAGAATATCTTTTAGTTTAAGTGTTTTTTAAGAATTCATTTTTTATTAAACATTTTGTTTAAAAATTGCTTAGCATTTAAACACTCATATGTTTGGTTACATTTACTCATAAGTGTTTTTTTTTTTTTTTTTTGAAAAATACTCATAAGTGTTTTTATACACAAGTTATTATATACTTACAAACTCTTTTTTTCTTAAAAAAAAAATGATTTTAAATGTTTCTCTAAAAATGGTTTATTTCTCAATCTCATTTTTTAATAAGTCATTTTTAACGGTTGTCAAACACTATATTTTTTTTTAAAATGATTTTTTTTTTAAAATTAAACAATTGAAAAATTAAACCAAGCATACGTACCCTAAGTCTATTTCATACCTGAATTTTCTTTTATAATCTCCTCTTTAGAAACATTTAAAAACGGAAAGAAAAATAGTTTTAAAAATATGCTTTGATTTTTTTAAAAATTTTCTTTTATAATCTCCTCTTTAGAAACATTTAAAAACGGAAAGAAAAATAGTTTTAAAAATATGCTTTGATTTTTTTAAAAATTTTGACTACGATTTTTAAATTGTTTTCAAAATGTAATAAAGAAAAATAAGGCAACGAGAATTTAGATAAATGTTTTAGAAATTTTCTATCATCAATTAAAATTCTATTGTTGGATTTCCATTGACTTTTCAACCATATTCTTGGAAGATTGAGGTGCACAAATGTAAGTGAAGTCAACCCCTTTGACAATTCTATAAAGAATGTGTGTGGTTTGGATTCGCTTGTCCATGTCTCAGACTGACCAATCAGAGCAAAGTCAAAATAAACAAATAAAATTCGAAAGATTAGGGACATTTTCTTTTAATAAATGAACTTTTTTTAAAAAGGCCAAATAGTACAAGTCTAATATTATAAAAATCAATATAAGCTCCATACAAAAATAATGTACTCCTCAATAAGTGATTAATTTGTTTCCATCAAAATCCTATAATGAACTTTTGCAAAAAATAAAAATAAAATCCTATCATAGATAATGTTATAGGTGATTCTGCGCCGCTCCGAAATGATTAGAGTCGATAAGGACAACACAACCCCAACCTGGAGATATAATCAAGAAGCGGGCACTGAAGGAGGGATAGACCGGAGCAAATGGGCCATAAGGCCGGAGGGATCGGGCCTTGGTCCAATCTCATGCTCTTCCTCGGCCCACTTAAGTGGTTCGAGCTCATTCATCCCTCACCCGGCTCCTGGTGCCCCGGTTCGACCGAATTCGACCCCAAGCGACTCCTGA ATGGCAATGGCTGAATCAGCTGCAAGTGAATTTGCATGGGGCAATGCTCTAAAAAAGAAGCTTCTTCAAAGAGATCAATTAGTTGGCAATAATGGAAACAATAATGGTGGTTTTGATTTCTCTCTCCAAACAGTGAAATTTTCTCAAGAAAATCTAGAGAGAGAAGAAGAAGAAGATCAAGAAGAAGAGAAAAAGATGGAGAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAGTGGAGATGATGATGATTCTAATAATGGAGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATATAAAATGTCTTGAGTTGCAGGTGATTCTGCGCCGCTCCGAAATGATTAGAGTCGATAAGGACAACACAACCCCAACCTGGAGATATAATCAAGAAGCGGGCACTGAAGGAGGGATAGACCGGAGCAAATGGGCCATAAGGCCGGAGGGATCGGGCCTTGGTCCAATCTCATGCTCTTCCTCGGCCCACTTAAGTGGTTCGAGCTCATTCATCCCTCACCCGGCTCCTGGTGCCCCGGTTCGACCGAATTCGACCCCAAGCGACTCCTGA ATGGCAATGGCTGAATCAGCTGCAAGTGAATTTGCATGGGGCAATGCTCTAAAAAAGAAGCTTCTTCAAAGAGATCAATTAGTTGGCAATAATGGAAACAATAATGGTGGTTTTGATTTCTCTCTCCAAACAGTGAAATTTTCTCAAGAAAATCTAGAGAGAGAAGAAGAAGAAGATCAAGAAGAAGAGAAAAAGATGGAGAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAGTGGAGATGATGATGATTCTAATAATGGAGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATATAAAATGTCTTGAGTTGCAGGTGATTCTGCGCCGCTCCGAAATGATTAGAGTCGATAAGGACAACACAACCCCAACCTGGAGATATAATCAAGAAGCGGGCACTGAAGGAGGGATAGACCGGAGCAAATGGGCCATAAGGCCGGAGGGATCGGGCCTTGGTCCAATCTCATGCTCTTCCTCGGCCCACTTAAGTGGTTCGAGCTCATTCATCCCTCACCCGGCTCCTGGTGCCCCGGTTCGACCGAATTCGACCCCAAGCGACTCCTGA MAMAESAASEFAWGNALKKKLLQRDQLVGNNGNNNGGFDFSLQTVKFSQENLEREEEEDQEEEKKMENGLMKLRKILPGGSGDDDDSNNGGDLEEDDLLKQTESYIKCLELQVILRRSEMIRVDKDNTTPTWRYNQEAGTEGGIDRSKWAIRPEGSGLGPISCSSSAHLSGSSSFIPHPAPGAPVRPNSTPSDS Homology
BLAST of Spg017168 vs. NCBI nr
Match: XP_038877916.1 (transcription factor bHLH146-like [Benincasa hispida]) HSP 1 Score: 138.7 bits (348), Expect = 5.5e-29 Identity = 82/117 (70.09%), Postives = 95/117 (81.20%), Query Frame = 0
BLAST of Spg017168 vs. NCBI nr
Match: XP_023538247.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 135.2 bits (339), Expect = 6.1e-28 Identity = 81/118 (68.64%), Postives = 93/118 (78.81%), Query Frame = 0
BLAST of Spg017168 vs. NCBI nr
Match: XP_011648935.1 (transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein Csa_021305 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 3.0e-27 Identity = 86/124 (69.35%), Postives = 99/124 (79.84%), Query Frame = 0
BLAST of Spg017168 vs. NCBI nr
Match: XP_022938205.1 (transcription factor bHLH146-like [Cucurbita moschata]) HSP 1 Score: 131.3 bits (329), Expect = 8.8e-27 Identity = 79/121 (65.29%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of Spg017168 vs. NCBI nr
Match: XP_022153354.1 (transcription factor bHLH146 [Momordica charantia]) HSP 1 Score: 130.2 bits (326), Expect = 2.0e-26 Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of Spg017168 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.8e-04 Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 0
BLAST of Spg017168 vs. ExPASy TrEMBL
Match: A0A0A0LJA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.5e-27 Identity = 86/124 (69.35%), Postives = 99/124 (79.84%), Query Frame = 0
BLAST of Spg017168 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.2e-27 Identity = 79/121 (65.29%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of Spg017168 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 9.4e-27 Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of Spg017168 vs. ExPASy TrEMBL
Match: A0A6J1K5R7 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111491923 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.7e-26 Identity = 81/117 (69.23%), Postives = 90/117 (76.92%), Query Frame = 0
BLAST of Spg017168 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.2e-25 Identity = 80/124 (64.52%), Postives = 94/124 (75.81%), Query Frame = 0
BLAST of Spg017168 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators ) HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05 Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 0
BLAST of Spg017168 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 2.6e-05 Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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