Spg017140 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGAATAATTGGGGTGGGTTGAATGATTGTTACTGTTGATAATGGATAAAATAATCGAGAGTAAAAATAACCCACCTCACCATTTATTTTTGTTGTTGCCCCAAACACTGAATAGGTTATAATAAAGTTATTATAACCTATTCAGTGCCCTAAACACCCCCTTACTTGTCTATATAAACATTTGCTAGTTATGTAAATGAAAAATAAAAATGCTCCTAGATTTCTATTATATTGATAGTTTATTAGATAAATTAACAATAAGAATTTAAAAAAAAAATGTCTTTTTTTTTTTTTTAATTCAAATCCCATTTACTAAATTTGAATATTTTTACAAGAAGGAAAAATGTGAGATAAAAGAGAGTTGTATGGGTGCTAATAGTTTGGTCAAATTTCTTTAAACACCTTTCATTACCAATGTAAATCATAAGACTCTTGCATTGAATTCAAAAATAAATAAATTAATTAAATAAAAACTCTTGCATTAATTTTTAGTTTTCTTCAAAAGAAACATTAATGTAGAGTTATGGGTAATTGTGTTTGGTCAAAGTTATTTTTGAAATTTTTCATTAAAAATGTCAACACCATGAGACTCTTGCATTATTGTCTAGTTTTTCTTTTTCTAATATTAAATTTTATTTATGTTTTGATGGGTTAGAATTACTAAGTCCTCTTTATGTTTTTACTTTGGTTCATGATTCAAATTCTACCTTTGTATTCATTAAGTTGTTTTCGCTCGAGGGAAAGGAGATTCTCATTAAAGCAGTGGCTCAAGCAGTACCCACATACATCATGAGTTGTTTCCGTCTCCCTAGCTCCATTTGCAACGAAATCGACAGGCTCTGTGTCAGATTCTGGTGGGGATCAGTAGGTGAGAAGTCCAAAAATCACTAGATGAGTTGGAGGAAGATGTGCAATAGTAAAGATCAAGGAGGAATGGGGTTTAGGCACCTAACAGCTTTTAACCAGGATATGCTTGCCAAAATCAGCTGGAGAGTCATCAGAAATCCCAACAGTTTCCTTTACAAGGTCTTGAGAGGTAGATACTTCAAAGATGGGGACTATATCTCGGTGCTCCCACAGGCCATTCTCCTTCTATGACTTGGAGAAGCATATGTTGGGGGAGAGAGTTATTTAAAAAAGGTTATGTAACGCCCCAGGAACAGGATTCGGAATCCGGATTCGGCCCTTAACGGCCCCGGCATTCCCCTGCGACCTGGCCACGCCACCATACTTGTCTGATACTACTTCTAAGATTGAAGACTGTCCCCACAAACCAACACGGGGTCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACATGCTTCCTAGGAAAATTCCCAGGAGGTCACCCAACATAGAACTTCTCCAAGCCAAGCACGCTTAACTTCAAAGTTCCTATGATTGAGCCACCGAAAAGGAAGGTGCACCTTGTTGGTATAGGTAGTATCTATCAATTCTTTTAAGTTTATCTTGACTATACTTTCATGTCCTCAGGATCCCTCTCATTCGGATGTGGCCTCGGTTCATTCATGTACCCCTCCTAACTCGGGTGTTACAGGTTACATCTGGAGGGTGGGTAATGGGAACAAAATCACGATAGAAGAAGACCCATGGATTCCCAGAGATGGCATCCCAAGACCTATCTTTTCAAATGATTTCCTAAAAGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGATATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATTTTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGTATATTTGGGATTCAAAGGTCTTTCCAAGAACAAAGATATGCTCGTGGAAAATTATTAATGATTCCATACCGTGCAAGGCTAACATCCAAAAGAAGGGAGTTGCTCTGAACCCTCTCTGTCCTTTATGCCGTAAGAATATTGAAACCACTTCCCATGTTATTTGGGAGTGCAAAAGTTTCAAAAATTATATGGGGGCTATTTATTCCCAAGAGCCTAATCCTCCTTGATTTATGCAGGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAACGCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGTGGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCTGGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATTAGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGATGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACTTCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAAAATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGGTTTGGTGGTTTTGGTTAATGAAGCATTTCCTTTTCAAAAAAAAAAGAAAAAAAGTTTGCACTCATACCCTTTTATTATTATTATTTTAATTGAACGTCATAAAAAGGTGGAGATTCGAACCTCTGATCTTTTAGTTAAAAAAATATGATCAATGATGAGCAATGAGATAAATAAATATTTCTAGGAGTTTAAGAAATAGTTACTAGTTTATCAAGAAATTGTGAGAACACAACCCTACTAAAGTATAATTGACAACCTAGTTTTGCTAATGAAAGGTCTTTTAACTTTGATATTTGTGATTTAGCCCTTGCATTTTTTTTTTCATCTTTTTTTTTTTTTTTACAATAAGTGGGGTGGGGGGATTCGAATCACAGACCTCTTGGTCATTAATACAACTCTATGTCAGTTGAGTTATGCTCTTGTTGATATTTTTTCATCTCGATTAATCCCTATAGCTTAGGAAGTTGCTCAACACATCTTTTTTCATCCAAACTCTTTTTTGTTGATATGTTCCTCTTCCCTCTTGGACAAAAGAGAAGATCTTTGTAGGACAACTATTGTTTCTTGAGGTTAATGGGTTTCTTCTTTTTTTTTTTTTCTTCTCAAAAGAAAAATTGACAATATAATCATTATTGTATTGAGCTTTTGTGAAGAAATCATCATTTTTAAAAAGGTACATAGATATACTTTTAAATGAATGGTAGCAATATAAAATTCATAGATATGATTTGAACTTTATCAGCCAAAATTTCAAACTTAAATATAAGGAAAATATTATTAGAATAAAATATTTAATAATTATTTTTTTTAAAAGAAGAACACCAAGAAAAAACACTACACATAAATAAGTTGTGAAACAAGAAGCACCAAAGATCAGTCATGACTCCCTTTGTCATTTACAATTTGTAATATTTAATTAAAGATGTAAATCATATTAAAATAATTACAAATAAAATGAAATGTCTAGTGACTTATTTATTAGCTATTGATTTCATTTAATTGGTAATTAAATTTAAACCTTATTTTTCTTCTTAAATTTTCATCCTCACTTTGTTGCAGTGTTTGTTACATTTAAATATTTTGTTTTGATCTCTAAATTTAAATAAAAAAAAAACAAAACATTAGTTTTCTTTTAATTAATTTTTTTTATTACATTAAACAAAAAATTTAGGCCACATATTTTTAGATTTCAATAGCAAACAAGATGCATAAAGCTTACAACACAAATCTGCATGTTGTTACATAAAATTTCTATTAAATGTACTATAAACATTTAGGTTAAATTAGACATTTAGTCCTTGAACTTTCAAGATTGTGTCAATTTAGTCTCTGAAGCTTTCAAAAGTTTCAAATAGATCCTCGAACTTTCAATTTTGTTTCCAATAGATCCATAAACTTTAAAAAGTATCTCATAGGTCCTTAAACTTTCGCTTTTGTGTCCAATAGGTCCCTCAATTTTTAATTTTGTGTCTAATAAGTCCTTGACCTATTCAACATTTTTTAAGATTCACAAGCCTATTAGATACAAAATTGAAAATTTAGAGTCTCAATAGGCATAAAATTCAATTTTATATACAGTAGATTGGTTAATTTTTAAAAATATCAAATATATCAGGACTTATTAGACACAAAATTGAAAATTCAGAGACATATTAGACATTTTTAAAATTCAAAGACCTATTAGAAACAAAATTGAAAATTTAAGGATCTAAAGAGATTTATTTGGTTACACTAAACTAAAAAATGATTCTACTAAGCTTGGATATTTTCAATCAATCACATTTATTTTATCAAAAAGTCACATTTTTTTTTTAATATTTTCAGTCAATCACGTTAAAGTCATTTTTTAGATTAGGACGGTAAGAAACCGAACCGAACCGATCGATAGGTTCAGTTTGATTTTAAAGAATATTATAGACAGAACCGAACTGAATCGATCAGTTTGGTTCGGTTTCGGTTTGCCTTTTCCTGTACCGAGATGATCTTTGCCCTAAATCTATGTGTTGTTTTGCTTCAGTCATCTCCCTCTTTCTCAACAACTCTCTCAAATCATTTCCTCTTTCTCAACAACTATTTCACAGATTCATCGGCAATCTCGCTTTCGTTTTCTTGCTCGCCAGCATCATTGCTCTTGCTCTTGCTCGCCAGTGTCGTTACTCTTTGCTCGTGATCTTTTCGTGGTCTATTAAATTTACTCTTTGCATGTGGTCTCCTCTCCGTCACTCTGTTTCCGACCCCGTCCAAGGCGTAATTTCTCTCCTCTATCGCTCACTCCATCATCGACCAAGCGTTTCTGTCCAACTCCTCGCTCCCGCTGCTGCCCCTCCGCCGTCCCGTCTCTGA ATGGATAGAATAATTGGGGTGGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGATATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATTTTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAACGCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGTGGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCTGGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATTAGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGATGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACTTCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAAAATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGA ATGGATAGAATAATTGGGGTGGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGATATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATTTTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAACGCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGTGGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCTGGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATTAGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGATGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACTTCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAAAATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGA MDRIIGVGKRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEWNPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNFRHCCRSKNTVAHCVVRHACKLDFSFVPGQAISPSRKNGHRFVAPGFLSFLAKSLSPFIEGV Homology
BLAST of Spg017140 vs. NCBI nr
Match: EEC68887.1 (hypothetical protein OsI_37529 [Oryza sativa Indica Group]) HSP 1 Score: 130.2 bits (326), Expect = 3.6e-26 Identity = 96/337 (28.49%), Postives = 159/337 (47.18%), Query Frame = 0
BLAST of Spg017140 vs. NCBI nr
Match: XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber]) HSP 1 Score: 117.9 bits (294), Expect = 1.8e-22 Identity = 90/307 (29.32%), Postives = 142/307 (46.25%), Query Frame = 0
BLAST of Spg017140 vs. NCBI nr
Match: XP_040249534.1 (uncharacterized protein LOC109734669 [Aegilops tauschii subsp. strangulata]) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-20 Identity = 89/356 (25.00%), Postives = 153/356 (42.98%), Query Frame = 0
BLAST of Spg017140 vs. NCBI nr
Match: XP_040249957.1 (uncharacterized protein LOC109761638 [Aegilops tauschii subsp. strangulata]) HSP 1 Score: 110.9 bits (276), Expect = 2.2e-20 Identity = 89/356 (25.00%), Postives = 153/356 (42.98%), Query Frame = 0
BLAST of Spg017140 vs. NCBI nr
Match: ABB46931.2 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]) HSP 1 Score: 110.2 bits (274), Expect = 3.8e-20 Identity = 88/330 (26.67%), Postives = 139/330 (42.12%), Query Frame = 0
BLAST of Spg017140 vs. ExPASy TrEMBL
Match: B8BN96 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37529 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.7e-26 Identity = 96/337 (28.49%), Postives = 159/337 (47.18%), Query Frame = 0
BLAST of Spg017140 vs. ExPASy TrEMBL
Match: Q8S5K1 (Putative retroelement OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0011A24.23 PE=4 SV=2) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20 Identity = 88/330 (26.67%), Postives = 139/330 (42.12%), Query Frame = 0
BLAST of Spg017140 vs. ExPASy TrEMBL
Match: Q33AJ4 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g09610 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20 Identity = 88/330 (26.67%), Postives = 139/330 (42.12%), Query Frame = 0
BLAST of Spg017140 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.1e-20 Identity = 70/224 (31.25%), Postives = 104/224 (46.43%), Query Frame = 0
BLAST of Spg017140 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.2e-19 Identity = 80/253 (31.62%), Postives = 119/253 (47.04%), Query Frame = 0
BLAST of Spg017140 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 7.7e-11 Identity = 61/219 (27.85%), Postives = 105/219 (47.95%), Query Frame = 0
BLAST of Spg017140 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 7.2e-09 Identity = 57/212 (26.89%), Postives = 88/212 (41.51%), Query Frame = 0
BLAST of Spg017140 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 4.4e-06 Identity = 57/218 (26.15%), Postives = 84/218 (38.53%), Query Frame = 0
BLAST of Spg017140 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 9.7e-06 Identity = 29/103 (28.16%), Postives = 48/103 (46.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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