Spg017140 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg017140
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold4: 39971248 .. 39976560 (+)
RNA-Seq ExpressionSpg017140
SyntenySpg017140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGAATAATTGGGGTGGGTTGAATGATTGTTACTGTTGATAATGGATAAAATAATCGAGAGTAAAAATAACCCACCTCACCATTTATTTTTGTTGTTGCCCCAAACACTGAATAGGTTATAATAAAGTTATTATAACCTATTCAGTGCCCTAAACACCCCCTTACTTGTCTATATAAACATTTGCTAGTTATGTAAATGAAAAATAAAAATGCTCCTAGATTTCTATTATATTGATAGTTTATTAGATAAATTAACAATAAGAATTTAAAAAAAAAATGTCTTTTTTTTTTTTTTAATTCAAATCCCATTTACTAAATTTGAATATTTTTACAAGAAGGAAAAATGTGAGATAAAAGAGAGTTGTATGGGTGCTAATAGTTTGGTCAAATTTCTTTAAACACCTTTCATTACCAATGTAAATCATAAGACTCTTGCATTGAATTCAAAAATAAATAAATTAATTAAATAAAAACTCTTGCATTAATTTTTAGTTTTCTTCAAAAGAAACATTAATGTAGAGTTATGGGTAATTGTGTTTGGTCAAAGTTATTTTTGAAATTTTTCATTAAAAATGTCAACACCATGAGACTCTTGCATTATTGTCTAGTTTTTCTTTTTCTAATATTAAATTTTATTTATGTTTTGATGGGTTAGAATTACTAAGTCCTCTTTATGTTTTTACTTTGGTTCATGATTCAAATTCTACCTTTGTATTCATTAAGTTGTTTTCGCTCGAGGGAAAGGAGATTCTCATTAAAGCAGTGGCTCAAGCAGTACCCACATACATCATGAGTTGTTTCCGTCTCCCTAGCTCCATTTGCAACGAAATCGACAGGCTCTGTGTCAGATTCTGGTGGGGATCAGTAGGTGAGAAGTCCAAAAATCACTAGATGAGTTGGAGGAAGATGTGCAATAGTAAAGATCAAGGAGGAATGGGGTTTAGGCACCTAACAGCTTTTAACCAGGATATGCTTGCCAAAATCAGCTGGAGAGTCATCAGAAATCCCAACAGTTTCCTTTACAAGGTCTTGAGAGGTAGATACTTCAAAGATGGGGACTATATCTCGGTGCTCCCACAGGCCATTCTCCTTCTATGACTTGGAGAAGCATATGTTGGGGGAGAGAGTTATTTAAAAAAGGTTATGTAACGCCCCAGGAACAGGATTCGGAATCCGGATTCGGCCCTTAACGGCCCCGGCATTCCCCTGCGACCTGGCCACGCCACCATACTTGTCTGATACTACTTCTAAGATTGAAGACTGTCCCCACAAACCAACACGGGGTCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACATGCTTCCTAGGAAAATTCCCAGGAGGTCACCCAACATAGAACTTCTCCAAGCCAAGCACGCTTAACTTCAAAGTTCCTATGATTGAGCCACCGAAAAGGAAGGTGCACCTTGTTGGTATAGGTAGTATCTATCAATTCTTTTAAGTTTATCTTGACTATACTTTCATGTCCTCAGGATCCCTCTCATTCGGATGTGGCCTCGGTTCATTCATGTACCCCTCCTAACTCGGGTGTTACAGGTTACATCTGGAGGGTGGGTAATGGGAACAAAATCACGATAGAAGAAGACCCATGGATTCCCAGAGATGGCATCCCAAGACCTATCTTTTCAAATGATTTCCTAAAAGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGATATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATTTTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGTATATTTGGGATTCAAAGGTCTTTCCAAGAACAAAGATATGCTCGTGGAAAATTATTAATGATTCCATACCGTGCAAGGCTAACATCCAAAAGAAGGGAGTTGCTCTGAACCCTCTCTGTCCTTTATGCCGTAAGAATATTGAAACCACTTCCCATGTTATTTGGGAGTGCAAAAGTTTCAAAAATTATATGGGGGCTATTTATTCCCAAGAGCCTAATCCTCCTTGATTTATGCAGGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAACGCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGTGGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCTGGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATTAGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGATGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACTTCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAAAATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGGTTTGGTGGTTTTGGTTAATGAAGCATTTCCTTTTCAAAAAAAAAAGAAAAAAAGTTTGCACTCATACCCTTTTATTATTATTATTTTAATTGAACGTCATAAAAAGGTGGAGATTCGAACCTCTGATCTTTTAGTTAAAAAAATATGATCAATGATGAGCAATGAGATAAATAAATATTTCTAGGAGTTTAAGAAATAGTTACTAGTTTATCAAGAAATTGTGAGAACACAACCCTACTAAAGTATAATTGACAACCTAGTTTTGCTAATGAAAGGTCTTTTAACTTTGATATTTGTGATTTAGCCCTTGCATTTTTTTTTTCATCTTTTTTTTTTTTTTTACAATAAGTGGGGTGGGGGGATTCGAATCACAGACCTCTTGGTCATTAATACAACTCTATGTCAGTTGAGTTATGCTCTTGTTGATATTTTTTCATCTCGATTAATCCCTATAGCTTAGGAAGTTGCTCAACACATCTTTTTTCATCCAAACTCTTTTTTGTTGATATGTTCCTCTTCCCTCTTGGACAAAAGAGAAGATCTTTGTAGGACAACTATTGTTTCTTGAGGTTAATGGGTTTCTTCTTTTTTTTTTTTTCTTCTCAAAAGAAAAATTGACAATATAATCATTATTGTATTGAGCTTTTGTGAAGAAATCATCATTTTTAAAAAGGTACATAGATATACTTTTAAATGAATGGTAGCAATATAAAATTCATAGATATGATTTGAACTTTATCAGCCAAAATTTCAAACTTAAATATAAGGAAAATATTATTAGAATAAAATATTTAATAATTATTTTTTTTAAAAGAAGAACACCAAGAAAAAACACTACACATAAATAAGTTGTGAAACAAGAAGCACCAAAGATCAGTCATGACTCCCTTTGTCATTTACAATTTGTAATATTTAATTAAAGATGTAAATCATATTAAAATAATTACAAATAAAATGAAATGTCTAGTGACTTATTTATTAGCTATTGATTTCATTTAATTGGTAATTAAATTTAAACCTTATTTTTCTTCTTAAATTTTCATCCTCACTTTGTTGCAGTGTTTGTTACATTTAAATATTTTGTTTTGATCTCTAAATTTAAATAAAAAAAAAACAAAACATTAGTTTTCTTTTAATTAATTTTTTTTATTACATTAAACAAAAAATTTAGGCCACATATTTTTAGATTTCAATAGCAAACAAGATGCATAAAGCTTACAACACAAATCTGCATGTTGTTACATAAAATTTCTATTAAATGTACTATAAACATTTAGGTTAAATTAGACATTTAGTCCTTGAACTTTCAAGATTGTGTCAATTTAGTCTCTGAAGCTTTCAAAAGTTTCAAATAGATCCTCGAACTTTCAATTTTGTTTCCAATAGATCCATAAACTTTAAAAAGTATCTCATAGGTCCTTAAACTTTCGCTTTTGTGTCCAATAGGTCCCTCAATTTTTAATTTTGTGTCTAATAAGTCCTTGACCTATTCAACATTTTTTAAGATTCACAAGCCTATTAGATACAAAATTGAAAATTTAGAGTCTCAATAGGCATAAAATTCAATTTTATATACAGTAGATTGGTTAATTTTTAAAAATATCAAATATATCAGGACTTATTAGACACAAAATTGAAAATTCAGAGACATATTAGACATTTTTAAAATTCAAAGACCTATTAGAAACAAAATTGAAAATTTAAGGATCTAAAGAGATTTATTTGGTTACACTAAACTAAAAAATGATTCTACTAAGCTTGGATATTTTCAATCAATCACATTTATTTTATCAAAAAGTCACATTTTTTTTTTAATATTTTCAGTCAATCACGTTAAAGTCATTTTTTAGATTAGGACGGTAAGAAACCGAACCGAACCGATCGATAGGTTCAGTTTGATTTTAAAGAATATTATAGACAGAACCGAACTGAATCGATCAGTTTGGTTCGGTTTCGGTTTGCCTTTTCCTGTACCGAGATGATCTTTGCCCTAAATCTATGTGTTGTTTTGCTTCAGTCATCTCCCTCTTTCTCAACAACTCTCTCAAATCATTTCCTCTTTCTCAACAACTATTTCACAGATTCATCGGCAATCTCGCTTTCGTTTTCTTGCTCGCCAGCATCATTGCTCTTGCTCTTGCTCGCCAGTGTCGTTACTCTTTGCTCGTGATCTTTTCGTGGTCTATTAAATTTACTCTTTGCATGTGGTCTCCTCTCCGTCACTCTGTTTCCGACCCCGTCCAAGGCGTAATTTCTCTCCTCTATCGCTCACTCCATCATCGACCAAGCGTTTCTGTCCAACTCCTCGCTCCCGCTGCTGCCCCTCCGCCGTCCCGTCTCTGA

mRNA sequence

ATGGATAGAATAATTGGGGTGGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGATATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATTTTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAACGCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGTGGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCTGGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATTAGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGATGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACTTCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAAAATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGA

Coding sequence (CDS)

ATGGATAGAATAATTGGGGTGGGTAAAAGGGTCAATGTCCTGCTGGATGAAAACAATCAATGGAAAGAAGATATTGTGAACCAATCCTTCCTCCCCCAAGATGTGGAAGATATCCTCAATATCCCTACAGGAGATAAAGAGGCTATCGATGAAATATATTGGAGACCGGATAAAAAAGGCATTTTCTCCGTCAAGAGTGCCTACCACCTAGCTATGGATTTTAAAGATCCTAGAAAAGCCTCACAATCGGACAAGAGCAAAGTGAAACTGTTTTGGAAGAAAGAGTGGAATCCTAAAGATTTCTGGAGCTGGATGGTGGATAATCTTAACGCCGAGGAGATTGCAAAAGGGCTGATTATAATGTGGAGTATATGGACGTATAGGAATAAAATTGAACATTCTCATTTTGTTCCAGCAGCAGAACATTTACAGAAAAGCGTGGAAAGCAACATCAAAGATTGGAAAATTGAGTACCTGTCAGCTCCGTTGAAGGGAAGATCTTGGAGCCACACGAATCAAGAATTGTGGGAAGCCCCAAAGCCGAACTCCTGGAAGCTTAATTCAGACGCAACGTGGAATGAGAAAGAGAATTGCGGAGGAATCGGTTGGGTGGTTCATGATTCGAATGGATCCCTGATTTGTTGCGGATCGAAAGCGATTAGTCGAAATTGGCCCATTAAAACATTGGAGGCCAAAGCGATTTTAGAAGGGATGAGAATGGTGGCGGATACCTGTTCTCGGCGCCGGATCCCTCTCGATATTGAGTTTGATGCCATGGAGGTCATCAGAGTCTTGGTAGGCGATGTGGAAGATTTATCGGAGACGAAAGTTGTAACGGACTCAATCATCAGCCAAGCGTCGAGGTTGTTTGCAGTCAACTTCCGCCATTGCTGTAGATCTAAGAACACAGTAGCCCACTGTGTTGTTAGGCATGCTTGTAAGCTTGATTTTTCTTTTGTTCCAGGCCAGGCAATTTCCCCTTCGCGGAAAAATGGGCATCGTTTTGTTGCCCCTGGTTTTCTTTCTTTTCTTGCGAAGAGTCTCTCCCCGTTTATTGAGGGCGTGTGA

Protein sequence

MDRIIGVGKRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKASQSDKSKVKLFWKKEWNPKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNFRHCCRSKNTVAHCVVRHACKLDFSFVPGQAISPSRKNGHRFVAPGFLSFLAKSLSPFIEGV
Homology
BLAST of Spg017140 vs. NCBI nr
Match: EEC68887.1 (hypothetical protein OsI_37529 [Oryza sativa Indica Group])

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-26
Identity = 96/337 (28.49%), Postives = 159/337 (47.18%), Query Frame = 0

Query: 9    KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAY 68
            K V+ L+ E+  W    ++Q F   D E ILNI    +   D I W PDK G+FSV+SAY
Sbjct: 1415 KWVSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAY 1474

Query: 69   HLAMDFKDPRKASQSDKSKVKLFWKKEWNPK-----DFWSWMVDNLNAEEIAKGLIIMWS 128
             LA    +  ++S S  + +   W+  W  K       ++W V +     +A  L+ +W 
Sbjct: 1475 RLAAQLVNIEESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVASNCLATMAMFLMTLWR 1534

Query: 129  IWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAP----LKGRSWSHT-------- 188
             W  RN++ H    P  E  Q+ ++S + D   +   AP    +KG+    T        
Sbjct: 1535 NWYVRNELIHGKSAPPTETSQRFIQSYV-DLLFQIRQAPQADLVKGKHVVRTVPLKGGPK 1594

Query: 189  ------NQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISR-NW 248
                  +Q  WE PK    KLN D +++     GG+G ++ +S G +I    K + R N 
Sbjct: 1595 YRVLNNHQPCWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNN 1654

Query: 249  PIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIIS 308
            P+++ E +A +EG+++         +P+ +E D   V+++L G   D S    V  +II 
Sbjct: 1655 PLES-ELRACVEGLKLAIHW---TLLPIQVETDCASVVQLLQGIGRDFS----VLANIIH 1714

Query: 309  QASRLF----AVNFRHCCRSKNTVAHCVVRHACKLDF 318
            +A  L      ++ +  CRS+N ++H +   A + DF
Sbjct: 1715 EARHLLVGERVISIKKICRSQNCISHHLANTA-RADF 1741

BLAST of Spg017140 vs. NCBI nr
Match: XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber])

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-22
Identity = 90/307 (29.32%), Postives = 142/307 (46.25%), Query Frame = 0

Query: 21   WKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHLAMDFKDPRKA 80
            WKE+I+ Q F P D+E IL IP   +   D + W     G FSV+SAY +AM       A
Sbjct: 832  WKEEIIRQIFFPVDMEVILGIPLSTRFPEDRVIWAETSNGGFSVRSAYRVAMGLYQAENA 891

Query: 81   -SQSDKSKVKLFWKKEWN-PKDFWSWMVDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVP 140
             S S  S+++ FWKK W+ P    S+     + E+I   + + W+ W  RN+I H     
Sbjct: 892  VSASSNSQLQSFWKKLWHLPVPHKSF-----DEEKIILVVTVAWAFWCNRNEIRHGAEKK 951

Query: 141  AAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWKLNSDATWNEKENC 200
            + E + + V   + ++     S P      S T    W  P P+  K+N D    +  N 
Sbjct: 952  SPEAIVQWVNRYLLEYSAATESVPAVREEVSVT----WNPPPPSILKVNVDGATTKNLNF 1011

Query: 201  GGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDA 260
             G+G VV D  G ++   S+ I        +E KA   G+++  D   +  I   +E D+
Sbjct: 1012 VGVGAVVRDEQGRVVAAMSRKIPAPLGPLEVEVKAFEAGLQLAKDMGYQNII---LEGDS 1071

Query: 261  MEVIRVLVGDVEDLSETKVVTDSIISQASRLFAVNF-----RHCCRSKNTVAHCVVRHAC 320
            + ++R L G    +S +    DS+I    +LF  +F      H  R +N  AH + ++A 
Sbjct: 1072 LIIVRALCG----ISLSSSTIDSMI-VGMQLFCSDFCTVYVSHVKRQENKPAHVLAKYAL 1121

BLAST of Spg017140 vs. NCBI nr
Match: XP_040249534.1 (uncharacterized protein LOC109734669 [Aegilops tauschii subsp. strangulata])

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-20
Identity = 89/356 (25.00%), Postives = 153/356 (42.98%), Query Frame = 0

Query: 9   KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAY 68
           +RV  LLD    W+ D++ + FLP DV+ I +I T  +   D I W P++ GIF+V+SAY
Sbjct: 352 RRVAELLDGEGSWRMDLLRRYFLPADVDVITSIRTSTRVTEDIIAWAPERNGIFTVRSAY 411

Query: 69  HLAMDFKDPRKASQSDKSK--VKLFWKKEWN----PKD-------------FW-----SW 128
            LAMD ++   AS + ++    +  WK  W     PKD              W      W
Sbjct: 412 RLAMDERERPSASATSRAPDGRRAIWKIIWGCPAPPKDGFHALCRCPLARELWRVMALDW 471

Query: 129 MVDNLNA----------------EEIAKGLII--MWSIWTYRNKIEHSHFVPAAEH---- 188
            +  + A                +E A+ +++  MW +W  RN+I H    P AE     
Sbjct: 472 NIPKVEAIVNTGPEWIFSLLDPLDETARLVVLMTMWRVWHVRNEITHDKAPPTAEASRRF 531

Query: 189 ----------LQKSVESNIKDWKIEYLSAPLKG-RSWSHTNQELWEAPKPNSWKLNSDAT 248
                     +++  + N++  K+  L +P +   S +   +  W  P+P   KLN+D +
Sbjct: 532 LHGYINSLMCIKQHPDGNLEKGKMVVLPSPPRAPESTAPKVRAQWVPPQPGWVKLNTDGS 591

Query: 249 WNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP 307
           +       G G ++ D  G +I    + +         E +A  EG+ +      R  +P
Sbjct: 592 YIAATGAAGGGMILRDDRGEIIYSACRELRTCDNALEAELEACREGLEL---ALHRSNLP 651

BLAST of Spg017140 vs. NCBI nr
Match: XP_040249957.1 (uncharacterized protein LOC109761638 [Aegilops tauschii subsp. strangulata])

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-20
Identity = 89/356 (25.00%), Postives = 153/356 (42.98%), Query Frame = 0

Query: 9   KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAY 68
           +RV  LLD    W+ D++ + FLP DV+ I +I T  +   D I W P++ GIF+V+SAY
Sbjct: 478 RRVAELLDGEGSWRMDLLRRYFLPADVDVITSIRTSTRVTEDIIAWAPERNGIFTVRSAY 537

Query: 69  HLAMDFKDPRKASQSDKSK--VKLFWKKEWN----PKD-------------FW-----SW 128
            LAMD ++   AS + ++    +  WK  W     PKD              W      W
Sbjct: 538 RLAMDERERPSASATSRAPDGRRAIWKIIWGCPAPPKDGFHALCRCPLARELWRVMALDW 597

Query: 129 MVDNLNA----------------EEIAKGLII--MWSIWTYRNKIEHSHFVPAAEH---- 188
            +  + A                +E A+ +++  MW +W  RN+I H    P AE     
Sbjct: 598 NIPKVEAIVNTGPEWIFSLLDPLDETARLVVLMTMWRVWHVRNEITHDKAPPTAEASRRF 657

Query: 189 ----------LQKSVESNIKDWKIEYLSAPLKG-RSWSHTNQELWEAPKPNSWKLNSDAT 248
                     +++  + N++  K+  L +P +   S +   +  W  P+P   KLN+D +
Sbjct: 658 LHGYINSLMCIKQHPDGNLEKGKMVVLPSPPRAPESTAPKVRAHWVPPQPGWVKLNTDGS 717

Query: 249 WNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIP 307
           +       G G ++ D  G +I    + +         E +A  EG+ +      R  +P
Sbjct: 718 YIAATGAAGGGMILRDDRGEIIYSACRELRTCDNALEAELEACREGLEL---ALHRSNLP 777

BLAST of Spg017140 vs. NCBI nr
Match: ABB46931.2 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])

HSP 1 Score: 110.2 bits (274), Expect = 3.8e-20
Identity = 88/330 (26.67%), Postives = 139/330 (42.12%), Query Frame = 0

Query: 11   VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHL 70
            V+ L+D++  W  D ++Q FLP D E ILNI    +   D I W PDK G FSV+SAYHL
Sbjct: 1495 VSDLIDQSGSWDTDKISQHFLPMDAEAILNIRLSSRLEDDFIAWHPDKLGRFSVRSAYHL 1554

Query: 71   AMDFKDPRKASQSDKSKVKLFWKKEW-----------------NPKDFWSWMVDNLNAEE 130
            A+      + S S  +     W   W                 +PK     +++    E+
Sbjct: 1555 AVALAHVDEGSSSSGNGNSRAWNALWKCNAPQKLNPLSNIRNGDPKVILD-LLEQSQPED 1614

Query: 131  IAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSH 190
                L+++W IW  RN+I H    P     ++ +ES   ++ + K    ++P KG+    
Sbjct: 1615 QVMLLMVLWRIWHTRNEIVHGKPAPGMLVSKRFIESYVLSLAEIKQHPQASPEKGKHVVD 1674

Query: 191  TNQ--------------ELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCG 250
              Q              + W  P P S KLN D ++ E +  GGIG V+ +  G +I   
Sbjct: 1675 VVQKKLHSIKRSREPVPDKWLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEVIFAA 1734

Query: 251  SKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK 307
               +         E  A  +G+ +         +P+ IE D + +I +        SE  
Sbjct: 1735 CGHVDCCSSALETELLACRDGLALALQW---TLLPIVIETDCLAMIHLFRDATGAKSELA 1794

BLAST of Spg017140 vs. ExPASy TrEMBL
Match: B8BN96 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37529 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-26
Identity = 96/337 (28.49%), Postives = 159/337 (47.18%), Query Frame = 0

Query: 9    KRVNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAY 68
            K V+ L+ E+  W    ++Q F   D E ILNI    +   D I W PDK G+FSV+SAY
Sbjct: 1415 KWVSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAY 1474

Query: 69   HLAMDFKDPRKASQSDKSKVKLFWKKEWNPK-----DFWSWMVDNLNAEEIAKGLIIMWS 128
             LA    +  ++S S  + +   W+  W  K       ++W V +     +A  L+ +W 
Sbjct: 1475 RLAAQLVNIEESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVASNCLATMAMFLMTLWR 1534

Query: 129  IWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAP----LKGRSWSHT-------- 188
             W  RN++ H    P  E  Q+ ++S + D   +   AP    +KG+    T        
Sbjct: 1535 NWYVRNELIHGKSAPPTETSQRFIQSYV-DLLFQIRQAPQADLVKGKHVVRTVPLKGGPK 1594

Query: 189  ------NQELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISR-NW 248
                  +Q  WE PK    KLN D +++     GG+G ++ +S G +I    K + R N 
Sbjct: 1595 YRVLNNHQPCWERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNN 1654

Query: 249  PIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVTDSIIS 308
            P+++ E +A +EG+++         +P+ +E D   V+++L G   D S    V  +II 
Sbjct: 1655 PLES-ELRACVEGLKLAIHW---TLLPIQVETDCASVVQLLQGIGRDFS----VLANIIH 1714

Query: 309  QASRLF----AVNFRHCCRSKNTVAHCVVRHACKLDF 318
            +A  L      ++ +  CRS+N ++H +   A + DF
Sbjct: 1715 EARHLLVGERVISIKKICRSQNCISHHLANTA-RADF 1741

BLAST of Spg017140 vs. ExPASy TrEMBL
Match: Q8S5K1 (Putative retroelement OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0011A24.23 PE=4 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20
Identity = 88/330 (26.67%), Postives = 139/330 (42.12%), Query Frame = 0

Query: 11   VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHL 70
            V+ L+D++  W  D ++Q FLP D E ILNI    +   D I W PDK G FSV+SAYHL
Sbjct: 1530 VSDLIDQSGSWDTDKISQHFLPMDAEAILNIRLSSRLEDDFIAWHPDKLGRFSVRSAYHL 1589

Query: 71   AMDFKDPRKASQSDKSKVKLFWKKEW-----------------NPKDFWSWMVDNLNAEE 130
            A+      + S S  +     W   W                 +PK     +++    E+
Sbjct: 1590 AVALAHVDEGSSSSGNGNSRAWNALWKCNAPQKLNPLSNIRNGDPKVILD-LLEQSQPED 1649

Query: 131  IAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSH 190
                L+++W IW  RN+I H    P     ++ +ES   ++ + K    ++P KG+    
Sbjct: 1650 QVMLLMVLWRIWHTRNEIVHGKPAPGMLVSKRFIESYVLSLAEIKQHPQASPEKGKHVVD 1709

Query: 191  TNQ--------------ELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCG 250
              Q              + W  P P S KLN D ++ E +  GGIG V+ +  G +I   
Sbjct: 1710 VVQKKLHSIKRSREPVPDKWLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEVIFAA 1769

Query: 251  SKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK 307
               +         E  A  +G+ +         +P+ IE D + +I +        SE  
Sbjct: 1770 CGHVDCCSSALETELLACRDGLALALQW---TLLPIVIETDCLAMIHLFRDATGAKSELA 1829

BLAST of Spg017140 vs. ExPASy TrEMBL
Match: Q33AJ4 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g09610 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20
Identity = 88/330 (26.67%), Postives = 139/330 (42.12%), Query Frame = 0

Query: 11   VNVLLDENNQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYHL 70
            V+ L+D++  W  D ++Q FLP D E ILNI    +   D I W PDK G FSV+SAYHL
Sbjct: 1495 VSDLIDQSGSWDTDKISQHFLPMDAEAILNIRLSSRLEDDFIAWHPDKLGRFSVRSAYHL 1554

Query: 71   AMDFKDPRKASQSDKSKVKLFWKKEW-----------------NPKDFWSWMVDNLNAEE 130
            A+      + S S  +     W   W                 +PK     +++    E+
Sbjct: 1555 AVALAHVDEGSSSSGNGNSRAWNALWKCNAPQKLNPLSNIRNGDPKVILD-LLEQSQPED 1614

Query: 131  IAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVES---NIKDWKIEYLSAPLKGRSWSH 190
                L+++W IW  RN+I H    P     ++ +ES   ++ + K    ++P KG+    
Sbjct: 1615 QVMLLMVLWRIWHTRNEIVHGKPAPGMLVSKRFIESYVLSLAEIKQHPQASPEKGKHVVD 1674

Query: 191  TNQ--------------ELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCG 250
              Q              + W  P P S KLN D ++ E +  GGIG V+ +  G +I   
Sbjct: 1675 VVQKKLHSIKRSREPVPDKWLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEVIFAA 1734

Query: 251  SKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETK 307
               +         E  A  +G+ +         +P+ IE D + +I +        SE  
Sbjct: 1735 CGHVDCCSSALETELLACRDGLALALQW---TLLPIVIETDCLAMIHLFRDATGAKSELA 1794

BLAST of Spg017140 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-20
Identity = 70/224 (31.25%), Postives = 104/224 (46.43%), Query Frame = 0

Query: 106 VDNLNAEEIAKGLIIMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLKG 165
           +D    EE  + +II W IW  RNK       P    +Q +++  I +      +  LKG
Sbjct: 1   MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIIN--SAGRNTNLKG 60

Query: 166 RSWSHTNQEL-------------WEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSL 225
           +S   TN++L             W+ P  NSWKLN++A W    N GGIGW++ D  G +
Sbjct: 61  KS---TNKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEV 120

Query: 226 ICCGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDL 285
           I    + I     I  LE  AI EG+R +     R   P+ +E D++E I +L    +D 
Sbjct: 121 IKASCRIIRAERNITYLEVMAICEGLRAIRQEHCR---PIHLESDSLEAIHLLHRQCQDQ 180

Query: 286 SETKVVTDSIISQASRLFAVNFRHCCRSKNTVAHCVVRHACKLD 317
           +E   + + I      +  V+ RH  R  N VAH + R A + D
Sbjct: 181 TEIIWLLEEIWQMMKDMEIVSMRHISREANKVAHGLARRAMEND 216

BLAST of Spg017140 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-19
Identity = 80/253 (31.62%), Postives = 119/253 (47.04%), Query Frame = 0

Query: 105 MVDNLNAEEIAKGLIIMWSIWTYRNKI----EHSHFVPAAEHLQKSVESNIKDWKIEYLS 164
           M+D  + E++   LI  W IW +RN +    EHS F    + L K V  +       Y S
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTES------SYQS 60

Query: 165 APLKGRSWSHTNQEL-WEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKA 224
                      N +L WE P  + W LN+DA+W++  + GGIGW++   +G ++  G++ 
Sbjct: 61  ETSLSMLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRF 120

Query: 225 ISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDIEFDAMEVIRVLVGDVEDLSETKVVT 284
           +     +K LEA AILEG+R + +    R  PL IE D+ EV  +L    EDL++T  V 
Sbjct: 121 VEACNNVKLLEASAILEGLRNLTNLGVLR--PLHIETDSAEVESLLNRKREDLTKTGWVV 180

Query: 285 DSIISQASRLFAVNFRHCCRSKNTVAHCVVRHACKLDFSFVPGQAISPSRKNGHRFVAPG 344
           + I++       + F    R  N  AH + + A  L  S +                 P 
Sbjct: 181 EEILNLRDSCEILAFAKVGRETNGCAHSLAQRASVLRESMIWVDCF------------PN 232

Query: 345 FLSFLAKSLSPFI 353
           +LS LAKS  PFI
Sbjct: 241 WLSILAKS-RPFI 232

BLAST of Spg017140 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 7.7e-11
Identity = 61/219 (27.85%), Postives = 105/219 (47.95%), Query Frame = 0

Query: 101 FWSWMVDNLNAE-EIAKGLI--IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKI- 160
           +W + + N N + E A  L+  ++W +W  RN++        A+ + +  E ++++W+I 
Sbjct: 341 YWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIR 400

Query: 161 -EYLSAPLKGRSWSHTNQELWEAPKPNSW-KLNSDATWNEKENCGGIGWVVHDSNGSLIC 220
            E  S   K +  + ++   W  P P+ W K N+DATWN      GIGWV+ +  G +  
Sbjct: 401 TEAESCGTKPQV-NRSSCGRWR-PPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKW 460

Query: 221 CGSKAISRNWPIKTLEAKAILEGMRMVADTCSRRRIPLDI-EFDAMEVIRVLVGDVEDLS 280
            G++A+ +   +K++  +A LE MR    + SR +    I E D+  +I +L  D E   
Sbjct: 461 MGARALPK---LKSV-LEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNND-EIWP 520

Query: 281 ETKVVTDSIISQASRLFAVNFRHCCRSKNTVAHCVVRHA 313
             K     +    S+   V F    R  NT+A  V R +
Sbjct: 521 SLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARES 552

BLAST of Spg017140 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-09
Identity = 57/212 (26.89%), Postives = 88/212 (41.51%), Query Frame = 0

Query: 120 IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKI-EYLSAPLKGRSWSHTNQELWEA 179
           ++W +W  RN++        A  + +    + ++W     L     G          W+A
Sbjct: 80  LLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKA 139

Query: 180 PKPNSW-KLNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRNWPIKTLEAKAILEG 239
           P P  W K N+DATW  +    GIGW++ + +G ++  G++A+ R   +  LEA+  LE 
Sbjct: 140 P-PYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNV--LEAE--LEA 199

Query: 240 MRMVADTCSRRRIP-LDIEFDAMEVIRVLVGDVEDLSETKVVTDSIISQASRLF-AVNFR 299
           +R    T SR     +  E DA  ++ +L  D  D   T       I Q    F  V F 
Sbjct: 200 LRWAVLTMSRFNYKRIIFESDAQALVNLLNSD--DFWPTLQPALEDIQQLLHHFEEVKFE 259

Query: 300 HCCRSKNTVAHCVVRHACKLD------FSFVP 322
              R  N VA  + R +          FS VP
Sbjct: 260 FTPRGGNKVADRIARESISFSNYDPKLFSIVP 284

BLAST of Spg017140 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 4.4e-06
Identity = 57/218 (26.15%), Postives = 84/218 (38.53%), Query Frame = 0

Query: 11  VNVLLDEN-NQWKEDIVNQSFLPQDVEDILNIPTGDKEAIDEIYWRPDKKGIFSVKSAYH 70
           VN L+D+N N WK D +     P D+  IL I        D   W   K G ++VKS Y 
Sbjct: 32  VNDLIDQNTNLWKLDRLQALIDPVDIPLILGIRPSRTYLSDGFSWSHTKSGNYTVKSGYW 91

Query: 71  LAMDFKDPRKASQSDKSKVKLFWKKE-WNPKDFWSWMVDNLNAEEIAKGLI--IMWSIWT 130
           +A D   P       +    +F +   +   DF  W        E    L   I+W IW 
Sbjct: 92  VARDLSRP-TCDPPFQGPGNIFPRNSLFYNFDFLFWRDREFGIGEKVLELFPWIIWYIWK 151

Query: 131 YRNKIEHSHF-VPAAEHLQKSVESNIKDWKIEYLSAPLKGRSWSHTNQELWEAPKPNSWK 190
            +N+    +F  P  E L  +++     WK   L      R          + P     +
Sbjct: 152 SKNRFVFENFREPPPETLVLALQETAV-WKQATLKEDDSTRPIVFVGSS--QTPSTLLPE 211

Query: 191 LNSDATWNEKENCGGIGWVVHDSNGSLICCGSKAISRN 224
              DA+W+  +   G GWV+   +  +I  G K+  RN
Sbjct: 212 CQLDASWHVDDTLSGHGWVLVRQD-LVIHLGLKSTRRN 244

BLAST of Spg017140 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 9.7e-06
Identity = 29/103 (28.16%), Postives = 48/103 (46.60%), Query Frame = 0

Query: 120 IMWSIWTYRNKIEHSHFVPAAEHLQKSVESNIKDWKIEYLSAPLK------GRSWSHTNQ 179
           +MW IW   N +  +H        Q +VE  + D K E+L   +        R+   +  
Sbjct: 47  LMWRIWKSGNDLVFNH---TRTKFQTTVEMALNDTK-EWLDNTMTNEQQNGNRNADPSRN 106

Query: 180 ELWEAPKPNSWKLNSDATWNEKENCGGIGWVVHDSNGSLICCG 217
             W  P  +  K N DA+ +E+    G+GW++ +S G++I CG
Sbjct: 107 TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECG 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
EEC68887.13.6e-2628.49hypothetical protein OsI_37529 [Oryza sativa Indica Group][more]
XP_023897447.11.8e-2229.32uncharacterized protein LOC112009345 [Quercus suber][more]
XP_040249534.11.7e-2025.00uncharacterized protein LOC109734669 [Aegilops tauschii subsp. strangulata][more]
XP_040249957.12.2e-2025.00uncharacterized protein LOC109761638 [Aegilops tauschii subsp. strangulata][more]
ABB46931.23.8e-2026.67retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
B8BN961.7e-2628.49Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX... [more]
Q8S5K11.9e-2026.67Putative retroelement OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0011A24.... [more]
Q33AJ41.9e-2026.67Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
A0A6J1CP264.1e-2031.25uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DNV91.2e-1931.62uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
Match NameE-valueIdentityDescription
AT4G29090.17.7e-1127.85Ribonuclease H-like superfamily protein [more]
AT2G34320.17.2e-0926.89Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT2G22440.14.4e-0626.15BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... [more]
AT5G65005.19.7e-0628.16Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 182..314
e-value: 4.1E-7
score: 32.1
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 187..312
e-value: 9.1E-19
score: 67.5
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 172..312
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 172..312
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 186..307
e-value: 2.121E-9
score: 53.0868
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 183..315

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg017140.1Spg017140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity