Spg017126 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017126
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA ligase
Location	scaffold4: 40709678 .. 40717378 (-)
RNA-Seq Expression	Spg017126
Synteny	Spg017126

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAAGCACAACAGCCCCAAAAAAGTGAAGGTTTTCTTATGGTCGGTAGCTTTTCGTAGCATAAATACGGATGAGAAAGTCCAAAGGAAGTTTCAACACTGGGCTCTTTCTCCTTCAGGATGCAGAATGTGCTTAAAAGAGAGGGAAGACCTAGACCATTTGTTCATCCACTGTGAATTTGCTGGAAAAGCAGGGGACTTCATTGCTATACAGTTGGGTATCTCTTTTTGTTTGCCTAAAACGGTGGATGAGTGGTTAGAAAAGGGCCTCAGCGCCTGGAATTTGCCTAAGAAAGCTAGAGTGGTGGCCAGCTGTGCTTTTAGAGCTACTATTTGGGGTATTTGGAAGGAAAGGAATTCTAGATCGTTTGAAGACTAGTCCTCTAGTTTCGATTCTTTTTGTATTTTTGTACAAAATACAGCCTCTTGGTGGATTTCTCTCAACAAGAATTTTTGTAATTATAGCTTAGTGATGATTGTCAATGATTGGAAGGCCCTTTTGAGATAGAGTCAGGGCAGGGGTTCCCTCATCCCCTGGCCCTTTTGCTGTCTTAATGAAATCTATCTCTTGATGTTTCTTATCAAAAAAAAAAAAAAAAAAAAAAATTTACTGTGTATGGTAAATCATTTACCTTTTCATTTATTTAAAGCTTTTACCTTATAGTAAAAGGCTTTCGTTGCTGTAAATTAGTTAGTTAGAGTTAGTTATTTTCCAGCCTATATATATATGGCTGTGATATTATATTTTCAGCATAAAATGAATAATAAGATTTGAGGTTTTTATTACATGTGTGCATCAGTAGGTATTTTTAATAAATAAAAAATTCTTGAGTGACACACTGCCAACCGGCTATCCAAAAAGTCTGAAGAACAATTAACCTAATAAAGTAACAAAGCAAATTGGTGAAGGGAGCAAGAAGCAACCGAAAAAGGAGAAGCTAGAGAGGAAAAAAACAATGTAAATAGAGTGTGAGGTCAAGTAATGTTGAGACGAAGAGAGATATAACTGTAAAACTATGAAGCTTTCCTCTTGCCGCCTTTAGAAACCATCTAACTAAGACTCTAAAATAATATATTTGTATTATGTACTCATGCTTCTCTTATATTATATGATTAAGGATTGTTGGTGACTACATCTGACAGTGTTGTCTGTCTGGTGACTACACCTGACAGTGTTGTCTGTTTGGTGACTACACTGGAAATTATTTATCTTTGTAATTTGCAATTGCTTAAAAAAAGGAAACGGAGATTTTACTAGATGAAGTGGTCATACATCCCCCTTTTTTTGTGTTGGAAACAGAAATTTTACTTGGATGTAGAAATGGTGATACACCTTTCGATGTATGGGTAGAAGCAGAAATATGTCCTGATCTTACTTTGGAATGTAAACACAGATTTGTAATTAAGTCTTCCATGCAAATTGCCCAATCTCAAATAATCAAAACAATCATGTTTCTTCCGGTCCAAATATAATGTTAGTCCCAAACTTTTACAATCAGTTCTTGTTAGTTTTTTTTTAACTACTTTTAAATTTATGTTCCTTTATTGCAGCTTTTGTAGAGCTGGTTCATTCAAGTAATGGTACCACACAAAGGGGTGCAAATGATAGTGGCTGGCAAGATAGTAAACGGAAGTACATTAAGTCAACTGGAAAGGGAAGGAAAAAGAGCGTTTCTGTTGTTCCTTCTCATTTACTTCAGACTGATATTTCAGGCATTAAAGAGGACTCCTTGATTTTCTCAAATATGTTATTCTGTATCCTAAAATTTAAATTAGTTTTGAATTCATCTCTCTTAGTTGAATTGTAGCATCATTATCCTTTTAAACATTGGTATTATGGACCGTACGTTCAGTTATAGAGTTGCATGATGGGATGTTGAAGAGGAAATAAACAAACTACTTGAGACCATTGTGTTTTGTTTTGTAGAAAATATTTAGCGGCAGTGAAAGATAATGAAACATGGTAAGAAGCTTTTGTGATGTAAATGATGTTTGCTTGTGAACTTGCGTTCTTTTGACATGTTTGAAGATATGTTGAACCTTGACATATGCAGACATTGTTAATGTGCCTCCAACCCATTCTCTCGATTCCTTGCACAAATTGATAGTGGAGAATGGGGGTAAATTCTCTATGAATTTGAATAATTCTGTTACACACTCTGTTGCAGCTGATAGCAAAGGTCTCTCTCTTTCTGTCTGATTTCAAATGCTTATCACACATCCATCTCTACATGATTGTGCACTCACATTTTTACACATGGTGTGCTTTTACAACTAATTAATTAGTAAAGAAAATTAGCAGGCATCAAATATGAGGCTGCCAAACGTCATGGAGATGTTATTCATTGTTCTTGGGTATTGGAATGTTGCTCCCTGAAGAAACTGCTTCCTCTACAGCCGAAGTTAGTAATGCCACATTATTCATCAACTTTTTTGGAAAATCCTCCGTTTGTAAATTGTGTAATACAATATTTGAACTTCATGCTTTTCTAGACATTTTCTCTTTCTCTCTGGCCACTCAAAGAAAAAACTGGAGGAGGAAATTGATGAATTTTCTGATTCGTACTTCTGGGATCTTGAACTTGCAGACCTGAAACAGGTACACCTAACAAAGATCATATCTAGTCCTTTTTCTACTTCCAAATGCAGGATAACCTAAGGGATTACACGTTCTTTTTTAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACTTAAAATATAGACCTAACTTTCTTTCCTGTCAGCTATTAAGCAACGTTAATAGATCAGAAGATGTGAAAGCTATTGACTACTACAGGGGAAAATATTGTCCAAAACGTGAATGGTGTATATTTGTTGGGTGCCAAATTTATTTCCTTCCATTAAGACCATCTTTGTAAGTTCTCTGTATCCAGTATGTCTAAAATTAACTGATTGAACTATTAGTTTTGACATTATATTGATCATAGTGTTGGGGTTCCATGATAACTTTCTCTTGTAGGAAATCTGATTGGGACGTTCTTTTGGAGCTTTTAATAAGGAGGTTGAAGGTTGAAGTTTCCTTCAGAGGTGGAGAAGTCAGTGATAACTGTGTTTCTGCTACCCATATTGTAGTCTTCTGTATGCCTGGATCGCCCATGGGGTATGAAACAGTGTTGAAACGGTAACAACTGTTATTCTGAATGTCTTTTGTGTCTTGATTAAGTTATTAGATGCTATTATTAGATGTAGCAGCCGGCCACTCTTAGATGCTATACCCTTTTTCTCTTCGTCTGATGGTGTGTTAAAATGACAAATTACTTTGGATACTCATGGAACTCTATGCGACACAGTTGTATACATTCAATGTGTGAAAGTTTCTAGTGACGTAAACTCATTTGAAACAAAAGGCATAAAAGGTGCCCTTGTTTTCTAACAATTGTAGCATTTTGACATCAACGGTTATTGTGCAGCTGTACTGAGCAAGAATAAAGTCTGTTATTCAATTGAACAACCTGATATTAATTAAAGTGTGGTTTCTTATTGTTTCAAAAAAAAAAAAAAGTGTGGTTTTAGAGAGGGACAGTGAAAAAAAAAAAAAAAAAGAACAACCTGTTCATATCCTCAAAATACATTTCCTTTATAGGGGTTTTGTGGTATGTGAAGTCAATATGGTTTCTTTACATTACTTTTTGATAATCCATATCTTGGATCCTCATATATGATACAACATTTTTCTCCCTCGATCTTATGGCAATCAAAACATTCTTGAGCCTAGTTCACAGTTTTCAATTTTAGAACTTGATTATCTTTAAAAGTTGATGGCTTTATTTCTTGCTTGAGCTCATGACTGATTCTTTACCTATCTTTTACAGCTGCAATGAAGCAGAGAAACATGTCATGTTGAAAGATAAGATTCATATCGTTGCACATCAGTGGTTGGAAGACTGTATGGAGAGGGCCCAAAGGTTGCAAGAAGATGCTTATAGCTTGAATCCTAATAGGGAAAAGTTGACTGAAAAGTTGTAAGTTCAAACACAAGAACTTGAGATAATGTTTTGTGCATTTCAAGTATTAAAATTTTACAAACGTAGAATACACACAATATCAGGGTTAATGAGAAACAAAGGGTACAGTTTTTCTCTTTTTTTGGCACTCAAAGATAAAGCCTCTAGTTCTCATTCGAACACATTACATAAGGGCATGTTAGGGGCAACTATATTGTTCGCTATCAAATTTAAAAATGGAAATTGGCATGTCTTAACCAAGATAAGTTTCTTGTATCTGTAGCGCGCATTCTGCATAAATAGATGCTTATCTAGCATGCATGCCATTTTATTTTTCCAGATATGAGATAAAGGTTTGGAAACTGTTATTGACATAATGTGTTTGTTTGACTGACTGATGTTTCCATTCATTAAATTAAAGTAAATGAGTTTGTCATTGGGTTTTAAAGGGACATTCCTCTAAAAATTGAATATCCTCTTGACTCCTGGTTATTTAGGTTCTGTTTGATAACCATTTTGTTTTTGGTTTTCTATTTATCAAAATTAAGCCTATAAATACTAGTTTCACTTCTGTGTTCCTTTATAATTGTTTTCAAAATCTAAACCCAAATTTGGAAACTAGAAGTATTTTTTTTGTTTAATTTTTTAATTTTTCAACAAAGAAAAACTTTTCATTAATGTAATGAAAAGAGACCATCACTCAAGATACAAACTTCGAAAAGGAGTTTTAAAAAACGGGAAATAAAAAATTACGACGGAAAAATAAAAGCATTCCAACTAAGGCATATATTCGGAAGAGTATAATCAACAAAAAATTTAGAAAGAGAACACGATGTAGAAGCCTGGAGGCGAGCAGACTCAAAACGGTCTAACCAATGAAGTTGCTTGTTATGGAAGATCCTTTGGTTTATTTTGAACCAAAGCTCCAAAAGCAAAACTTTAACGGCATTGAACCACAAGATCTTGGATTTAGGAGCCAAAGGAGGACCTAGAAGTAGCTGTAGCACATTTTCCTTGAATGAACCGGAGAAAGCCCCATTTAAATTGAAAACTGACAGCAATTTAAACAGCAATTTCGAGAATAAAGACAGTCAAAAAATAAATGTTGAAGAGTATCCGCTGCTGATAAGAGAGAAACATAAAGAACAAACTGCAGGAGAAATATAATGTATAGGGATTTTCCTTTGAAGAACTTCTAAACAATTCAAAGAGCCATTAAGCACAATCCATAAAAAGATATTCTCACTTGGGACTTTGACTTCCATACTGCTGAAAAAACTTTCTTATCCAACAACCATGGAAGAAATACAAGCTAGCAGCATCTGAAGATCAATCATCTCCTCATCTTTGAGTAAGCTTCTGAAAAAGATATTCCAAGAGAGATTAGAATGTTCCAATGGTCATAAACCGAACAATTGGGGGAAGAAGAAACAGGAAACAGCGGAGGCAATGAAACCTTCAGAGGGGAACTATCTCTGAATCATTAACCCAAAGGTCATGTCAAAATAAAATTCTTCCGTCATTACCTGGTTTGAATGAAGCAAAAGACTCCACCTGCTTCCAAACCTTAGAAATATTCATCCATGGACTACAACGACTCATCACATTCTTACCAGACGTGTGCCACTCATGAAGATTAGAACCATGAGTACTCATAATTACTTTAGACCAAAATGAATCCGACTCAAGCATAAATCTCCATCCCCATTTAGCAATAAGGCCAAAATTTCTATGCTTCAAACCTACAATATCGAGACCACCATCTAACTGCATTTTAGAAACCAAAATCCATCTCATCAAATGGTTTATCTTACCTCCTTCATTTCCTTCCCAAAAAAGACCAAGGTATAATATAAAGGAACACTAGATGAAACCAAATCACTCTTGATAAATTGAATCTCTTCCAACGATCAAAGCTTCTTTTGAATCTTTTCAATTACCGGCTGCCAAAAACAAATCCTCTTTGGATGACCACCAAGGGGAAGACCAAGGTATAGAAAAGGCAAAGTCTCAACTTTGCAATTCAATCTAGAAGACACTTGTCGAAGCTTGGAATCATCCCACATTTATTCCATGCAAAGCTGGCTTTTCGCAATTAACCTTCTGACTCAAACACCATTCAAGGAACTCAATTGTTTGAATTATAATATCAAGCATGTCATCATCGTATTTGCAGAAAAGAGGTGTATCATCAGGAAATTGAAGAATGGATACGTGGACTTTATCTTGGCCCATTATAAACCCTTGAAAAACACTTTAGATTAGGCAATATCAATTAGAGCACTCAGTACTTCACTTGAAAGAAATAAGAAAGAAAAAAGCGGGTCTCCTTCCCTTAATCCTTGAGAAGCCATAATTCTTCCAAATGATCTCCCATTAATAAAGATAGAAAATTTGGGATTCCTAAAACGACCTTGAATCCAGCTAATCCATTTAGCATCAAAAGCTTTAAGTTTCATCACCTCCTCTAAAAATTCCTTATCAACGTAATCAAAAGCTTTTTTTAAATCAAGCTTAAGAATCAAACCCTTTTTCCTACTAAGCTAATGAAATTTCTCTTAGAAAACCCATAATTTAAGAAGTAGCATTAGAAAATGTTTAAATCTATAATTGCAACCCACATATTTTGAGATGCTGATAATAAAATAGGGATGTATGTGCTTGCAGTCATTATTTGGATTTGTTTAATAGATATGCATGCTTCATTTGGTTCTGAAATGGCATCTTGACTGTTACATTGTTGCCTTTTGTTCTCTCTGCTTCCGCAGAAATTCTGGCATAGATTCTGAGACACCATGGGACTCAAAACATATAGAAAACCAGAAAACTTCCTCTCCTTCCAAGGAGTATAAAGATCGAGGAAGAAACGATGCTGCTTCAGTACAACACATGCTCTCATATTCAACTGAGAGATCTAGTGGAAACAAAAGAGGAAGGCCTGCTGCAAGGAGCATGCAGAAAGGGAAATCGGGTGTCGAACAAGTTCGAAGAGCTCGGGCACGAACAGCCAAGGGGCCTGCAAAAATAAGTGAAGTTGAGTCAGACAGCAGTGACCATACTGATGAAAAAACGAATGCAGAAACTAGAAATATTAGAACACTAAACAGTGAAAACTCAGAAAAGGAGTTTAAAATGCTAGAAAATGAGAGACCCGACAAGAAGAAAAGAGGAAGACCTACTACAAGGAACACACAGAAAGGGAAAGCAGGGGTCGAACAAGTTCGAAGAACTCGGGCACGTATAGCCAAGGGGTCAGCAAAAATAGGCGATGTTGAGTCAGACAGCAGTGACTCTACTGATGAAAAACCAAAAGCGGAAGAAACTGGAATGGAGAAAGGAAACATTGGAACAGTAAGGGAGGAAAACTCAAAAACAGATGAGTTCAAAATGCTAGAAGACCGTGATTGGAAACAAAAAGGCAAGGCCATTGAACATATTGATGTTGCAGAACCCAAATCTAATGTTCAGTTTGGTAAACTTCCGGAAGTCAATATATGTGAAAGGTATAATTACCAAGAAACTGAAAAATGTGAAAAGCTGGAAGTCATGACTGATCCACTTCAAGCCATGTTATTAGATATGGTTCCAAGTCTTGGAATGAGTGAAACTAAAAGTAGTAGTACTGTTCTTGAGGAGAAGCAACCAGTAGTACATAACAATTCTGAGCCAGCTAAGAAGAAAGTCAGCTACAAGGACGTTGCCAGTGAACTGCTTAAGGATTGGTAA

mRNA sequence

ATGTGGAAGCACAACAGCCCCAAAAAAGTGAAGGTTTTCTTATGGTCGGTAGCTTTTCGTAGCATAAATACGGATGAGAAAGTCCAAAGGAAGTTTCAACACTGGGCTCTTTCTCCTTCAGGATGCAGAATGTGCTTAAAAGAGAGGGAAGACCTAGACCATTTGTTCATCCACTGTGAATTTGCTGGAAAAGCAGGGGACTTCATTGCTATACAGTTGGGTATCTCTTTTTGTTTGCCTAAAACGGTGGATGAGTGGTTAGAAAAGGGCCTCAGCGCCTGGAATTTGCCTAAGAAAGCTAGAGTGGTGGCCAGCTGTGCTTTTAGAGCTACTATTTGGGGATTGTTGGTGACTACATCTGACAGTGTTGTCTGTCTGGTGACTACACCTGACAGTGTTGTCTGTTTGGTGACTACACTGGAAATTATTTATCTTTCTTTTGTAGAGCTGGTTCATTCAAGTAATGGTACCACACAAAGGGGTGCAAATGATAGTGGCTGGCAAGATAGTAAACGGAAGTACATTAAGTCAACTGGAAAGGGAAGGAAAAAGAGCGTTTCTGTTGTTCCTTCTCATTTACTTCAGACTGATATTTCAGGCATTAAAGAGGACTCCTTGATTTTCTCAAATATGTTATTCTACATTGTTAATGTGCCTCCAACCCATTCTCTCGATTCCTTGCACAAATTGATAGTGGAGAATGGGGGTAAATTCTCTATGAATTTGAATAATTCTGTTACACACTCTGTTGCAGCTGATAGCAAAGGCATCAAATATGAGGCTGCCAAACGTCATGGAGATGTTATTCATTGTTCTTGGGTATTGGAATGTTGCTCCCTGAAGAAACTGCTTCCTCTACAGCCGAAACATTTTCTCTTTCTCTCTGGCCACTCAAAGAAAAAACTGGAGGAGGAAATTGATGAATTTTCTGATTCGTACTTCTGGGATCTTGAACTTGCAGACCTGAAACAGCTATTAAGCAACGTTAATAGATCAGAAGATGTGAAAGCTATTGACTACTACAGGGGAAAATATTGTCCAAAACGTGAATGGAAATCTGATTGGGACGTTCTTTTGGAGCTTTTAATAAGGAGGTTGAAGGTTGAAGTTTCCTTCAGAGGTGGAGAAGTCAGTGATAACTGTGTTTCTGCTACCCATATTGTAGTCTTCTGTATGCCTGGATCGCCCATGGGGTATGAAACAGTGTTGAAACGCTGCAATGAAGCAGAGAAACATGTCATGTTGAAAGATAAGATTCATATCGTTGCACATCAGTGGTTGGAAGACTGTATGGAGAGGGCCCAAAGGTTGCAAGAAGATGCTTATAGCTTGAATCCTAATAGGGAAAAGTTGACTGAAAAGTTATATGAGATAAAGATATGCATGCTTCATTTGGTTCTGAAATGGCATCTTGACTGTTACATTGTTGCCTTTTGTTCTCTCTGCTTCCGCAGAAATTCTGGCATAGATTCTGAGACACCATGGGACTCAAAACATATAGAAAACCAGAAAACTTCCTCTCCTTCCAAGGAGTATAAAGATCGAGGAAGAAACGATGCTGCTTCAGTACAACACATGCTCTCATATTCAACTGAGAGATCTAGTGGAAACAAAAGAGGAAGGCCTGCTGCAAGGAGCATGCAGAAAGGGAAATCGGGTGTCGAACAAGTTCGAAGAGCTCGGGCACGAACAGCCAAGGGGCCTGCAAAAATAAGTGAAGTTGAGTCAGACAGCAGTGACCATACTGATGAAAAAACGAATGCAGAAACTAGAAATATTAGAACACTAAACAGTGAAAACTCAGAAAAGGAGTTTAAAATGCTAGAAAATGAGAGACCCGACAAGAAGAAAAGAGGAAGACCTACTACAAGGAACACACAGAAAGGGAAAGCAGGGGTCGAACAAGTTCGAAGAACTCGGGCACGTATAGCCAAGGGGTCAGCAAAAATAGGCGATGTTGAGTCAGACAGCAGTGACTCTACTGATGAAAAACCAAAAGCGGAAGAAACTGGAATGGAGAAAGGAAACATTGGAACAGTAAGGGAGGAAAACTCAAAAACAGATGAGTTCAAAATGCTAGAAGACCGTGATTGGAAACAAAAAGGCAAGGCCATTGAACATATTGATGTTGCAGAACCCAAATCTAATGTTCAGTTTGGTAAACTTCCGGAAGTCAATATATGTGAAAGGTATAATTACCAAGAAACTGAAAAATGTGAAAAGCTGGAAGTCATGACTGATCCACTTCAAGCCATGTTATTAGATATGGTTCCAAGTCTTGGAATGAGTGAAACTAAAAGTAGTAGTACTGTTCTTGAGGAGAAGCAACCAGTAGTACATAACAATTCTGAGCCAGCTAAGAAGAAAGTCAGCTACAAGGACGTTGCCAGTGAACTGCTTAAGGATTGGTAA

Coding sequence (CDS)

ATGTGGAAGCACAACAGCCCCAAAAAAGTGAAGGTTTTCTTATGGTCGGTAGCTTTTCGTAGCATAAATACGGATGAGAAAGTCCAAAGGAAGTTTCAACACTGGGCTCTTTCTCCTTCAGGATGCAGAATGTGCTTAAAAGAGAGGGAAGACCTAGACCATTTGTTCATCCACTGTGAATTTGCTGGAAAAGCAGGGGACTTCATTGCTATACAGTTGGGTATCTCTTTTTGTTTGCCTAAAACGGTGGATGAGTGGTTAGAAAAGGGCCTCAGCGCCTGGAATTTGCCTAAGAAAGCTAGAGTGGTGGCCAGCTGTGCTTTTAGAGCTACTATTTGGGGATTGTTGGTGACTACATCTGACAGTGTTGTCTGTCTGGTGACTACACCTGACAGTGTTGTCTGTTTGGTGACTACACTGGAAATTATTTATCTTTCTTTTGTAGAGCTGGTTCATTCAAGTAATGGTACCACACAAAGGGGTGCAAATGATAGTGGCTGGCAAGATAGTAAACGGAAGTACATTAAGTCAACTGGAAAGGGAAGGAAAAAGAGCGTTTCTGTTGTTCCTTCTCATTTACTTCAGACTGATATTTCAGGCATTAAAGAGGACTCCTTGATTTTCTCAAATATGTTATTCTACATTGTTAATGTGCCTCCAACCCATTCTCTCGATTCCTTGCACAAATTGATAGTGGAGAATGGGGGTAAATTCTCTATGAATTTGAATAATTCTGTTACACACTCTGTTGCAGCTGATAGCAAAGGCATCAAATATGAGGCTGCCAAACGTCATGGAGATGTTATTCATTGTTCTTGGGTATTGGAATGTTGCTCCCTGAAGAAACTGCTTCCTCTACAGCCGAAACATTTTCTCTTTCTCTCTGGCCACTCAAAGAAAAAACTGGAGGAGGAAATTGATGAATTTTCTGATTCGTACTTCTGGGATCTTGAACTTGCAGACCTGAAACAGCTATTAAGCAACGTTAATAGATCAGAAGATGTGAAAGCTATTGACTACTACAGGGGAAAATATTGTCCAAAACGTGAATGGAAATCTGATTGGGACGTTCTTTTGGAGCTTTTAATAAGGAGGTTGAAGGTTGAAGTTTCCTTCAGAGGTGGAGAAGTCAGTGATAACTGTGTTTCTGCTACCCATATTGTAGTCTTCTGTATGCCTGGATCGCCCATGGGGTATGAAACAGTGTTGAAACGCTGCAATGAAGCAGAGAAACATGTCATGTTGAAAGATAAGATTCATATCGTTGCACATCAGTGGTTGGAAGACTGTATGGAGAGGGCCCAAAGGTTGCAAGAAGATGCTTATAGCTTGAATCCTAATAGGGAAAAGTTGACTGAAAAGTTATATGAGATAAAGATATGCATGCTTCATTTGGTTCTGAAATGGCATCTTGACTGTTACATTGTTGCCTTTTGTTCTCTCTGCTTCCGCAGAAATTCTGGCATAGATTCTGAGACACCATGGGACTCAAAACATATAGAAAACCAGAAAACTTCCTCTCCTTCCAAGGAGTATAAAGATCGAGGAAGAAACGATGCTGCTTCAGTACAACACATGCTCTCATATTCAACTGAGAGATCTAGTGGAAACAAAAGAGGAAGGCCTGCTGCAAGGAGCATGCAGAAAGGGAAATCGGGTGTCGAACAAGTTCGAAGAGCTCGGGCACGAACAGCCAAGGGGCCTGCAAAAATAAGTGAAGTTGAGTCAGACAGCAGTGACCATACTGATGAAAAAACGAATGCAGAAACTAGAAATATTAGAACACTAAACAGTGAAAACTCAGAAAAGGAGTTTAAAATGCTAGAAAATGAGAGACCCGACAAGAAGAAAAGAGGAAGACCTACTACAAGGAACACACAGAAAGGGAAAGCAGGGGTCGAACAAGTTCGAAGAACTCGGGCACGTATAGCCAAGGGGTCAGCAAAAATAGGCGATGTTGAGTCAGACAGCAGTGACTCTACTGATGAAAAACCAAAAGCGGAAGAAACTGGAATGGAGAAAGGAAACATTGGAACAGTAAGGGAGGAAAACTCAAAAACAGATGAGTTCAAAATGCTAGAAGACCGTGATTGGAAACAAAAAGGCAAGGCCATTGAACATATTGATGTTGCAGAACCCAAATCTAATGTTCAGTTTGGTAAACTTCCGGAAGTCAATATATGTGAAAGGTATAATTACCAAGAAACTGAAAAATGTGAAAAGCTGGAAGTCATGACTGATCCACTTCAAGCCATGTTATTAGATATGGTTCCAAGTCTTGGAATGAGTGAAACTAAAAGTAGTAGTACTGTTCTTGAGGAGAAGCAACCAGTAGTACATAACAATTCTGAGCCAGCTAAGAAGAAAGTCAGCTACAAGGACGTTGCCAGTGAACTGCTTAAGGATTGGTAA

Protein sequence

MWKHNSPKKVKVFLWSVAFRSINTDEKVQRKFQHWALSPSGCRMCLKEREDLDHLFIHCEFAGKAGDFIAIQLGISFCLPKTVDEWLEKGLSAWNLPKKARVVASCAFRATIWGLLVTTSDSVVCLVTTPDSVVCLVTTLEIIYLSFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDSLIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRHGDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQLLSNVNRSEDVKAIDYYRGKYCPKREWKSDWDVLLELLIRRLKVEVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLEDCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSGIDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQKGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSENSEKEFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKAEETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNICERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPVVHNNSEPAKKKVSYKDVASELLKDW

Homology

[Close]

BLAST of Spg017126 vs. NCBI nr
Match: XP_038889084.1 (DNA ligase 4 isoform X1 [Benincasa hispida])

HSP 1 Score: 928.3 bits (2398), Expect = 4.4e-266
Identity = 505/676 (74.70%), Postives = 554/676 (81.95%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNGTTQRG N+SGWQDSKRKYIKSTGKGRKKSVS+VPSHLLQTDI+GI EDS
Sbjct: 593  SFVELVHSSNGTTQRGTNNSGWQDSKRKYIKSTGKGRKKSVSIVPSHLLQTDITGITEDS 652

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPP+HSLDSLHKLIVENGG FSMNLNNSVTHS+AADSKGIKYEAAKRH
Sbjct: 653  LIFSNMLFYIVNVPPSHSLDSLHKLIVENGGTFSMNLNNSVTHSIAADSKGIKYEAAKRH 712

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SWVLECCS KKLLPL+PKHFLFLSGHSKKKLEEEIDEFSDSYFWDLEL+DLKQL
Sbjct: 713  GDVIHYSWVLECCSQKKLLPLKPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELSDLKQL 772

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYRGKYCPKREW                 KSDW VLLEL +RRLKV
Sbjct: 773  LSNVSRSEDVKAIDYYRGKYCPKREWCMFVGCQIYFLPLRLYLKSDWGVLLELSVRRLKV 832

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSD+ VSATHIVVF +PG+P+ YETVLK C+EAEKH MLKDKIHIV HQWLE
Sbjct: 833  EVSFRGGKVSDDHVSATHIVVFSIPGAPVRYETVLKSCDEAEKHAMLKDKIHIVTHQWLE 892

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERAQRLQEDAYSLNPN +K  + +                              NSG
Sbjct: 893  DCLERAQRLQEDAYSLNPNGKKSIDNI------------------------------NSG 952

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            +D E P  S++I+NQ+  SPS+EYKD+GRN+AAS QH LSYSTERS G KR RPAARSMQ
Sbjct: 953  MDFEMPSASENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAARSMQ 1012

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSENSEK-EFKM 625
            KGKSGV+QVR  R RTAKGPAKISEVESD+SD+TDEKTNAETRN+ TL SE SEK EFK 
Sbjct: 1013 KGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKNEFKT 1072

Query: 626  LENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKA 685
            LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGSAKIGD+ES S+DSTDEK   
Sbjct: 1073 LENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDEKTNT 1132

Query: 686  EETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNI 745
            +E   EK       EENSK DEFKML D D KQKGKAIE    A+  SNV FGK+PEV I
Sbjct: 1133 DELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVPEVGI 1192

Query: 746  CERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPVVHNNSEPAK 804
             ERY++++ EKCEKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+P V++NSEPAK
Sbjct: 1193 SERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKKP-VNSNSEPAK 1230

[Close]

BLAST of Spg017126 vs. NCBI nr
Match: XP_038889088.1 (DNA ligase 4 isoform X4 [Benincasa hispida] >XP_038889089.1 DNA ligase 4 isoform X4 [Benincasa hispida] >XP_038889090.1 DNA ligase 4 isoform X4 [Benincasa hispida])

HSP 1 Score: 928.3 bits (2398), Expect = 4.4e-266
Identity = 505/676 (74.70%), Postives = 554/676 (81.95%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNGTTQRG N+SGWQDSKRKYIKSTGKGRKKSVS+VPSHLLQTDI+GI EDS
Sbjct: 433  SFVELVHSSNGTTQRGTNNSGWQDSKRKYIKSTGKGRKKSVSIVPSHLLQTDITGITEDS 492

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPP+HSLDSLHKLIVENGG FSMNLNNSVTHS+AADSKGIKYEAAKRH
Sbjct: 493  LIFSNMLFYIVNVPPSHSLDSLHKLIVENGGTFSMNLNNSVTHSIAADSKGIKYEAAKRH 552

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SWVLECCS KKLLPL+PKHFLFLSGHSKKKLEEEIDEFSDSYFWDLEL+DLKQL
Sbjct: 553  GDVIHYSWVLECCSQKKLLPLKPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELSDLKQL 612

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYRGKYCPKREW                 KSDW VLLEL +RRLKV
Sbjct: 613  LSNVSRSEDVKAIDYYRGKYCPKREWCMFVGCQIYFLPLRLYLKSDWGVLLELSVRRLKV 672

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSD+ VSATHIVVF +PG+P+ YETVLK C+EAEKH MLKDKIHIV HQWLE
Sbjct: 673  EVSFRGGKVSDDHVSATHIVVFSIPGAPVRYETVLKSCDEAEKHAMLKDKIHIVTHQWLE 732

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERAQRLQEDAYSLNPN +K  + +                              NSG
Sbjct: 733  DCLERAQRLQEDAYSLNPNGKKSIDNI------------------------------NSG 792

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            +D E P  S++I+NQ+  SPS+EYKD+GRN+AAS QH LSYSTERS G KR RPAARSMQ
Sbjct: 793  MDFEMPSASENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAARSMQ 852

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSENSEK-EFKM 625
            KGKSGV+QVR  R RTAKGPAKISEVESD+SD+TDEKTNAETRN+ TL SE SEK EFK 
Sbjct: 853  KGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKNEFKT 912

Query: 626  LENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKA 685
            LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGSAKIGD+ES S+DSTDEK   
Sbjct: 913  LENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDEKTNT 972

Query: 686  EETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNI 745
            +E   EK       EENSK DEFKML D D KQKGKAIE    A+  SNV FGK+PEV I
Sbjct: 973  DELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVPEVGI 1032

Query: 746  CERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPVVHNNSEPAK 804
             ERY++++ EKCEKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+P V++NSEPAK
Sbjct: 1033 SERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKKP-VNSNSEPAK 1070

[Close]

BLAST of Spg017126 vs. NCBI nr
Match: XP_038889086.1 (DNA ligase 4 isoform X3 [Benincasa hispida] >XP_038889087.1 DNA ligase 4 isoform X3 [Benincasa hispida])

HSP 1 Score: 928.3 bits (2398), Expect = 4.4e-266
Identity = 505/676 (74.70%), Postives = 554/676 (81.95%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNGTTQRG N+SGWQDSKRKYIKSTGKGRKKSVS+VPSHLLQTDI+GI EDS
Sbjct: 475  SFVELVHSSNGTTQRGTNNSGWQDSKRKYIKSTGKGRKKSVSIVPSHLLQTDITGITEDS 534

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPP+HSLDSLHKLIVENGG FSMNLNNSVTHS+AADSKGIKYEAAKRH
Sbjct: 535  LIFSNMLFYIVNVPPSHSLDSLHKLIVENGGTFSMNLNNSVTHSIAADSKGIKYEAAKRH 594

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SWVLECCS KKLLPL+PKHFLFLSGHSKKKLEEEIDEFSDSYFWDLEL+DLKQL
Sbjct: 595  GDVIHYSWVLECCSQKKLLPLKPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELSDLKQL 654

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYRGKYCPKREW                 KSDW VLLEL +RRLKV
Sbjct: 655  LSNVSRSEDVKAIDYYRGKYCPKREWCMFVGCQIYFLPLRLYLKSDWGVLLELSVRRLKV 714

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSD+ VSATHIVVF +PG+P+ YETVLK C+EAEKH MLKDKIHIV HQWLE
Sbjct: 715  EVSFRGGKVSDDHVSATHIVVFSIPGAPVRYETVLKSCDEAEKHAMLKDKIHIVTHQWLE 774

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERAQRLQEDAYSLNPN +K  + +                              NSG
Sbjct: 775  DCLERAQRLQEDAYSLNPNGKKSIDNI------------------------------NSG 834

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            +D E P  S++I+NQ+  SPS+EYKD+GRN+AAS QH LSYSTERS G KR RPAARSMQ
Sbjct: 835  MDFEMPSASENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAARSMQ 894

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSENSEK-EFKM 625
            KGKSGV+QVR  R RTAKGPAKISEVESD+SD+TDEKTNAETRN+ TL SE SEK EFK 
Sbjct: 895  KGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKNEFKT 954

Query: 626  LENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKA 685
            LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGSAKIGD+ES S+DSTDEK   
Sbjct: 955  LENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDEKTNT 1014

Query: 686  EETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNI 745
            +E   EK       EENSK DEFKML D D KQKGKAIE    A+  SNV FGK+PEV I
Sbjct: 1015 DELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVPEVGI 1074

Query: 746  CERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPVVHNNSEPAK 804
             ERY++++ EKCEKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+P V++NSEPAK
Sbjct: 1075 SERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKKP-VNSNSEPAK 1112

[Close]

BLAST of Spg017126 vs. NCBI nr
Match: XP_038889085.1 (DNA ligase 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 928.3 bits (2398), Expect = 4.4e-266
Identity = 505/676 (74.70%), Postives = 554/676 (81.95%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNGTTQRG N+SGWQDSKRKYIKSTGKGRKKSVS+VPSHLLQTDI+GI EDS
Sbjct: 561  SFVELVHSSNGTTQRGTNNSGWQDSKRKYIKSTGKGRKKSVSIVPSHLLQTDITGITEDS 620

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPP+HSLDSLHKLIVENGG FSMNLNNSVTHS+AADSKGIKYEAAKRH
Sbjct: 621  LIFSNMLFYIVNVPPSHSLDSLHKLIVENGGTFSMNLNNSVTHSIAADSKGIKYEAAKRH 680

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SWVLECCS KKLLPL+PKHFLFLSGHSKKKLEEEIDEFSDSYFWDLEL+DLKQL
Sbjct: 681  GDVIHYSWVLECCSQKKLLPLKPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELSDLKQL 740

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYRGKYCPKREW                 KSDW VLLEL +RRLKV
Sbjct: 741  LSNVSRSEDVKAIDYYRGKYCPKREWCMFVGCQIYFLPLRLYLKSDWGVLLELSVRRLKV 800

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSD+ VSATHIVVF +PG+P+ YETVLK C+EAEKH MLKDKIHIV HQWLE
Sbjct: 801  EVSFRGGKVSDDHVSATHIVVFSIPGAPVRYETVLKSCDEAEKHAMLKDKIHIVTHQWLE 860

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERAQRLQEDAYSLNPN +K  + +                              NSG
Sbjct: 861  DCLERAQRLQEDAYSLNPNGKKSIDNI------------------------------NSG 920

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            +D E P  S++I+NQ+  SPS+EYKD+GRN+AAS QH LSYSTERS G KR RPAARSMQ
Sbjct: 921  MDFEMPSASENIDNQQIPSPSQEYKDQGRNEAASGQHTLSYSTERSGGKKRRRPAARSMQ 980

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSENSEK-EFKM 625
            KGKSGV+QVR  R RTAKGPAKISEVESD+SD+TDEKTNAETRN+ TL SE SEK EFK 
Sbjct: 981  KGKSGVKQVREFRTRTAKGPAKISEVESDNSDYTDEKTNAETRNVGTLCSETSEKNEFKT 1040

Query: 626  LENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKA 685
            LENE  + KKRGRPT  NTQKGKAG + VRRTRARI KGSAKIGD+ES S+DSTDEK   
Sbjct: 1041 LENEISNTKKRGRPTAGNTQKGKAGAKAVRRTRARITKGSAKIGDIESGSNDSTDEKTNT 1100

Query: 686  EETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNI 745
            +E   EK       EENSK DEFKML D D KQKGKAIE    A+  SNV FGK+PEV I
Sbjct: 1101 DELRKEK-------EENSKRDEFKMLIDHDPKQKGKAIEENVRADFGSNVDFGKVPEVGI 1160

Query: 746  CERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETKSSSTVLEEKQPVVHNNSEPAK 804
             ERY++++ EKCEKLE+M DPL+AMLLDMVPSLGMS +KSSSTV+EEK+P V++NSEPAK
Sbjct: 1161 SERYDFKDVEKCEKLEIMKDPLEAMLLDMVPSLGMSGSKSSSTVVEEKKP-VNSNSEPAK 1198

[Close]

BLAST of Spg017126 vs. NCBI nr
Match: XP_022996609.1 (DNA ligase 4 [Cucurbita maxima])

HSP 1 Score: 890.2 bits (2299), Expect = 1.3e-254
Identity = 500/679 (73.64%), Postives = 533/679 (78.50%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNGTTQRG N+SGWQDSKRK I STGKGRKKSVSVVPSHLLQTDISGIK DS
Sbjct: 593  SFVELVHSSNGTTQRGTNNSGWQDSKRKDINSTGKGRKKSVSVVPSHLLQTDISGIKGDS 652

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPPTHSLDSLHKLIVENGG FSMNLNNSVTHSVAADSKGIKYEAAKRH
Sbjct: 653  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGTFSMNLNNSVTHSVAADSKGIKYEAAKRH 712

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SWVLECCS KKLLPL PKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL
Sbjct: 713  GDVIHYSWVLECCSQKKLLPLMPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 772

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYR KYCPK EW                 KSDWD LLEL +RRLKV
Sbjct: 773  LSNVSRSEDVKAIDYYREKYCPKHEWCIFSGCQIYFHPLKPSLKSDWDSLLELSVRRLKV 832

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSD+ VSATHIVVFC+PG P+  E VLK CNEA+KHVMLKDK HIVAHQWLE
Sbjct: 833  EVSFRGGKVSDDRVSATHIVVFCIPGPPVKCEAVLKSCNEADKHVMLKDKTHIVAHQWLE 892

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERAQRLQEDAYSLNPN +K  EKL                              NSG
Sbjct: 893  DCLERAQRLQEDAYSLNPNTKKSIEKL------------------------------NSG 952

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            I SETP  S++I+NQ+  SPSKEYKD G N++AS QHMLS+ST+RS G KRGRPA  SMQ
Sbjct: 953  IGSETPSASENIDNQQIPSPSKEYKDLGGNESASGQHMLSHSTKRSGGKKRGRPAESSMQ 1012

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSEN-SEKEFKM 625
            KGKS +EQVRR   R  KGPAKI+EVESDSSDHT+EKTNAET NI TL SE+  + EF+M
Sbjct: 1013 KGKSSIEQVRRVFPRRTKGPAKINEVESDSSDHTNEKTNAETGNIGTLCSESFGKNEFRM 1072

Query: 626  LENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKA 685
            LENERP KKKRG P  RNTQKGKA VEQVRRTRARIAKG         D SD TD K  A
Sbjct: 1073 LENERPVKKKRGSP-ARNTQKGKARVEQVRRTRARIAKG---------DGSDYTDVKKNA 1132

Query: 686  EETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNI 745
            EE  ME+GN+GTV ++NSKT+E KMLED DWKQKGKAIE  DVA+PKS            
Sbjct: 1133 EEAEMERGNVGTVCKDNSKTEELKMLEDCDWKQKGKAIEQSDVADPKS------------ 1192

Query: 746  CERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETK---SSSTVLEEKQPVVHNNSE 804
                     +  EKLEVMTDPLQAMLLDMVPSLGMS+TK   SSS+VLEEKQP VHNNSE
Sbjct: 1193 ---------KNSEKLEVMTDPLQAMLLDMVPSLGMSQTKSSSSSSSVLEEKQP-VHNNSE 1209

[Close]

BLAST of Spg017126 vs. ExPASy Swiss-Prot
Match: Q9LL84 (DNA ligase 4 OS=Arabidopsis thaliana OX=3702 GN=LIG4 PE=1 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-102
Identity = 258/711 (36.29%), Postives = 373/711 (52.46%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            +FVELV+SSNGTTQ+       QD+  K  KS+ +G KK+VS+VPS  +QTD+S IK  +
Sbjct: 595  AFVELVNSSNGTTQKQKESESTQDNP-KVNKSSKRGEKKNVSLVPSQFIQTDVSDIKGKT 654

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
             IFSNM+FY VNVP +HSL++ HK++VENGGKFSMNLNNSVTH +AA+S GIKY+AAKR 
Sbjct: 655  SIFSNMIFYFVNVPRSHSLETFHKMVVENGGKFSMNLNNSVTHCIAAESSGIKYQAAKRQ 714

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
             DVIH SWVL+CCS  K+LPL PK+FL L+  S+ KL+++IDEFSDSY+WDL+L  LKQ+
Sbjct: 715  RDVIHFSWVLDCCSRNKMLPLLPKYFLHLTDASRTKLQDDIDEFSDSYYWDLDLEGLKQV 774

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSN  +SED K+IDYY+ K CP++ W                  ++ + LL ++ +RL +
Sbjct: 775  LSNAKQSEDSKSIDYYKKKLCPEKRWSCLLSCCVYFYPYSQTLSTEEEALLGIMAKRLML 834

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EV   GG+VS+N   A+H+VV  M   P+ +  V K  +E EK ++LK ++H+V+  WLE
Sbjct: 835  EVLMAGGKVSNNLAHASHLVVLAMAEEPLDFTLVSKSFSEMEKRLLLKKRLHVVSSHWLE 894

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            + ++R ++L ED Y+L P                                          
Sbjct: 895  ESLQREEKLCEDVYTLRP------------------------------------------ 954

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNK------RGRP 565
                     K++E   T     E  D+  +D   V    S  T+  + +K      RGR 
Sbjct: 955  ---------KYMEESDT-----EESDKSEHDTTEVASQGSAQTKEPASSKIAITSSRGRS 1014

Query: 566  AARSMQKGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSENSE 625
              R++++G+S    ++R + R  K P+KIS  E++ SD ++EK +    +I         
Sbjct: 1015 NTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAE------- 1074

Query: 626  KEFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRT-RARIAKGSAKIGDVESDSSDST 685
                  E +   + +R     +  ++GK+ V Q +R  R+R  K +AKIG  ESD +D  
Sbjct: 1075 ------ETDSFGEAQRNSSRGKCAKRGKSRVGQTQRVQRSRRGKKAAKIGGDESDENDEL 1134

Query: 686  DEKPKAEETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGK 745
            D          E+GN      EN +T E  + +  + +Q+   +   +  +   N +   
Sbjct: 1135 DGNNNV-SADAEEGNAAGRSVENEETREPDIAKYTESQQRDNTVAVEEALQDSRNAK--- 1194

Query: 746  LPEVNICERYNYQETEKCEKLEVMTDPLQAMLLDM--VPSLGMSETKSSSTVLEEKQPV- 804
                         E +  EKL++  DPLQAML+ M  +PS   +ET + +T    K  V 
Sbjct: 1195 ------------TEMDMKEKLQIHEDPLQAMLMKMFPIPSQKTTETSNRTTGEYRKANVS 1219

[Close]

BLAST of Spg017126 vs. ExPASy Swiss-Prot
Match: Q7X7E9 (Putative DNA ligase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=LIG4 PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 1.3e-47
Identity = 189/680 (27.79%), Postives = 292/680 (42.94%), Query Frame = 0


Query: 232  VENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRHGDVIHCSWVLECCSLKKLLPLQPKHF 291
            V+NGG FSMNLN+SVTH +AA+ K      A R G +IH SW+L+CC  K+LL LQPK  
Sbjct: 715  VKNGGSFSMNLNDSVTHCIAAEKK------ATRQGRIIHYSWILDCCKEKRLLHLQPKFD 774

Query: 292  LFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQLLSNVNRS-EDVKAIDYYRGKYCPKRE 351
              L      K  EEID ++D ++WD++++DLKQ+ SN++R+  D   + +Y+ KYC    
Sbjct: 775  PCL--QPMHKFPEEIDSYADYFYWDIDISDLKQIFSNMDRAVVDSNMVHHYKKKYCADER 834

Query: 352  W----------------KSDWDVLLELLIRRLKVEVSFRGGEVSDNCVSATHIVVFCMPG 411
            +                 +D++V+ +L ++R+K +++  GG+V      ATH+++  +  
Sbjct: 835  FCFFQGCCVYFYHAPLVNADYNVISDLALKRVKQDLTMHGGQVCSILAPATHLIIVSVL- 894

Query: 412  SPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLEDCMERAQRLQEDAYSLNPNREKLTEK 471
                ++ + K    AE+  +   ++ +V+++WLED +E+  RL E  YSL P      + 
Sbjct: 895  QAYNFDMLYKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKP------DT 954

Query: 472  LYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSGIDSETPWDSKHIENQKTSSPSKEYKD 531
            L EI+I                             ++  P + K  EN+K          
Sbjct: 955  LEEIEI-------------------------ERSEETVQPCNDKLEENEKA--------- 1014

Query: 532  RGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQKGKSGVEQVRRARARTAKGPAKISEV 591
                D + V+H         +  KRGRP++ + +  K     VRR RAR     AKI +V
Sbjct: 1015 ----DTSHVKH---------APRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDV 1074

Query: 592  ESDSSDHTD---EKTNAETRNIRTLNSENSEKEFKMLENERPDKKKRGRP-------TTR 651
            E + SDH +   +    +T NI  +  ++ +K+       R  + +RG+         + 
Sbjct: 1075 EPEESDHGETGLDDQIPDTDNISKMEVDSFDKDQVSARPVRRTRARRGKQHAKIDYGQSE 1134

Query: 652  NTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSD------------------------- 711
             +  G+ G +  R     I+K       +E DSSD                         
Sbjct: 1135 ESDPGETGQDDQRLDADYISK-------MEEDSSDRDQGAHPTAPRVVRRSRAQRGKWLA 1194

Query: 712  STDEKPKAEETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPK----S 771
              D +    ETG +   +    +  SK +E    +D++    G  +  +D  EPK    S
Sbjct: 1195 KIDRETGPGETGQDDKKLNA--DSISKMEEHAHDKDQE-PPPGAQLITLDEQEPKGIKSS 1254

Query: 772  NVQFGKLPE----VNICERYNYQETEK--CEKLEVMTDPLQAMLLDMVPSLGMSETKSSS 804
              +    P+      +  R   + T    CEK+E M DPL AMLLDM+PSLG  +T   +
Sbjct: 1255 TTETPSSPKHERNQTVLRRDTAETTSSATCEKMEQMVDPLHAMLLDMIPSLGQMKTDVGN 1314

[Close]

BLAST of Spg017126 vs. ExPASy Swiss-Prot
Match: Q8BTF7 (DNA ligase 4 OS=Mus musculus OX=10090 GN=Lig4 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 9.0e-12
Identity = 73/311 (23.47%), Postives = 134/311 (43.09%), Query Frame = 0


Query: 163 NDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDSLIFSNMLFYIVNVPPTH 222
           +D   ++ +RK I  T    KK++ ++  HL   ++S + + S +F ++ F +++    +
Sbjct: 619 DDDEPREKRRKPISKT----KKAIRII-EHLKAPNLSNVNKVSNVFEDVEFCVMSGLDGY 678

Query: 223 SLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYE--AAKRHGDVIHCSWVLECCSL 282
               L   I E GG    N     T+ V A S+ ++ +   +    DV+   W+LEC   
Sbjct: 679 PKADLENRIAEFGGYIVQNPGPD-TYCVIAGSENVRVKNIISSDKNDVVKPEWLLECFKT 738

Query: 283 KKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQLLSNVNRSEDVKAIDY 342
           K  +P QP+  + +   +K+    E D + DSYF D +L  LK++   +  SE     + 
Sbjct: 739 KTCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLDQLKEVFLGIKPSEQQTPEE- 798

Query: 343 YRGKYCPKREWKSDWD-----------VLLEL------LIRRLK--------VEVSFRGG 402
                    E +  WD           + L+L      L  R++        +E+ F G 
Sbjct: 799 -MAPVIADLECRYSWDHSPLSMFRHYTIYLDLYAVINDLSSRIEATRLGITALELRFHGA 858

Query: 403 EVSDNCVS--ATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLEDCMER 445
           +V  +C+S   +H+++    G      T  K         MLK K  I+   W+ D +++
Sbjct: 859 KVV-SCLSEGVSHVII----GEDQRRVTDFKIFRR-----MLKKKFKILQESWVSDSVDK 911

[Close]

BLAST of Spg017126 vs. ExPASy Swiss-Prot
Match: Q5R6L3 (DNA ligase 4 OS=Pongo abelii OX=9601 GN=DNL4 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-10
Identity = 46/172 (26.74%), Postives = 82/172 (47.67%), Query Frame = 0


Query: 166 GWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDSLIFSNMLFYIVNVPPTHSLD 225
           G  D  ++  +      KK + ++  HL   +++ + + S IF ++ F +++   +    
Sbjct: 618 GGDDEPQEKKRKAAPKMKKVIGII-EHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKP 677

Query: 226 SLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYE---AAKRHGDVIHCSWVLECCSLKK 285
            L   I E GG    N     T+ V A SK I+ +    + +H DV+  +W+LEC   K 
Sbjct: 678 DLENRIAEFGGYIVQNPGPD-TYCVIAGSKNIRVKNIILSNKH-DVVKPAWLLECFKTKS 737

Query: 286 LLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQLLSNVNRSED 335
            +P QP   + +   +K+    E D + DSYF D +L  LK++ S +  S +
Sbjct: 738 FVPWQPHFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSGIKNSNE 786

[Close]

BLAST of Spg017126 vs. ExPASy Swiss-Prot
Match: P49917 (DNA ligase 4 OS=Homo sapiens OX=9606 GN=LIG4 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 4.9e-10
Identity = 45/172 (26.16%), Postives = 83/172 (48.26%), Query Frame = 0


Query: 166 GWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDSLIFSNMLFYIVNVPPTHSLD 225
           G  D  ++  +      KK + ++  HL   +++ + + S IF ++ F +++   +    
Sbjct: 618 GGDDEPQEKKRKAAPKMKKVIGII-EHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKP 677

Query: 226 SLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYE---AAKRHGDVIHCSWVLECCSLKK 285
            L   I E GG    N     T+ V A S+ I+ +    + +H DV+  +W+LEC   K 
Sbjct: 678 DLENRIAEFGGYIVQNPGPD-TYCVIAGSENIRVKNIILSNKH-DVVKPAWLLECFKTKS 737

Query: 286 LLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQLLSNVNRSED 335
            +P QP+  + +   +K+    E D + DSYF D +L  LK++ S +  S +
Sbjct: 738 FVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFIDTDLNQLKEVFSGIKNSNE 786

[Close]

BLAST of Spg017126 vs. ExPASy TrEMBL
Match: A0A6J1K974 (DNA ligase OS=Cucurbita maxima OX=3661 GN=LOC111491798 PE=3 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 6.5e-255
Identity = 500/679 (73.64%), Postives = 533/679 (78.50%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNGTTQRG N+SGWQDSKRK I STGKGRKKSVSVVPSHLLQTDISGIK DS
Sbjct: 593  SFVELVHSSNGTTQRGTNNSGWQDSKRKDINSTGKGRKKSVSVVPSHLLQTDISGIKGDS 652

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPPTHSLDSLHKLIVENGG FSMNLNNSVTHSVAADSKGIKYEAAKRH
Sbjct: 653  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGTFSMNLNNSVTHSVAADSKGIKYEAAKRH 712

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SWVLECCS KKLLPL PKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL
Sbjct: 713  GDVIHYSWVLECCSQKKLLPLMPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 772

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYR KYCPK EW                 KSDWD LLEL +RRLKV
Sbjct: 773  LSNVSRSEDVKAIDYYREKYCPKHEWCIFSGCQIYFHPLKPSLKSDWDSLLELSVRRLKV 832

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSD+ VSATHIVVFC+PG P+  E VLK CNEA+KHVMLKDK HIVAHQWLE
Sbjct: 833  EVSFRGGKVSDDRVSATHIVVFCIPGPPVKCEAVLKSCNEADKHVMLKDKTHIVAHQWLE 892

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERAQRLQEDAYSLNPN +K  EKL                              NSG
Sbjct: 893  DCLERAQRLQEDAYSLNPNTKKSIEKL------------------------------NSG 952

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            I SETP  S++I+NQ+  SPSKEYKD G N++AS QHMLS+ST+RS G KRGRPA  SMQ
Sbjct: 953  IGSETPSASENIDNQQIPSPSKEYKDLGGNESASGQHMLSHSTKRSGGKKRGRPAESSMQ 1012

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSEN-SEKEFKM 625
            KGKS +EQVRR   R  KGPAKI+EVESDSSDHT+EKTNAET NI TL SE+  + EF+M
Sbjct: 1013 KGKSSIEQVRRVFPRRTKGPAKINEVESDSSDHTNEKTNAETGNIGTLCSESFGKNEFRM 1072

Query: 626  LENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKA 685
            LENERP KKKRG P  RNTQKGKA VEQVRRTRARIAKG         D SD TD K  A
Sbjct: 1073 LENERPVKKKRGSP-ARNTQKGKARVEQVRRTRARIAKG---------DGSDYTDVKKNA 1132

Query: 686  EETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNI 745
            EE  ME+GN+GTV ++NSKT+E KMLED DWKQKGKAIE  DVA+PKS            
Sbjct: 1133 EEAEMERGNVGTVCKDNSKTEELKMLEDCDWKQKGKAIEQSDVADPKS------------ 1192

Query: 746  CERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETK---SSSTVLEEKQPVVHNNSE 804
                     +  EKLEVMTDPLQAMLLDMVPSLGMS+TK   SSS+VLEEKQP VHNNSE
Sbjct: 1193 ---------KNSEKLEVMTDPLQAMLLDMVPSLGMSQTKSSSSSSSVLEEKQP-VHNNSE 1209

[Close]

BLAST of Spg017126 vs. ExPASy TrEMBL
Match: A0A6J1ENX2 (DNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111436208 PE=3 SV=1)

HSP 1 Score: 880.9 bits (2275), Expect = 3.9e-252
Identity = 494/679 (72.75%), Postives = 529/679 (77.91%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNGTTQRG N+SGWQDSKRKYI STGKGRKKSVSVVPSHLLQTDISGIK DS
Sbjct: 593  SFVELVHSSNGTTQRGTNNSGWQDSKRKYINSTGKGRKKSVSVVPSHLLQTDISGIKGDS 652

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPPTHSLDSLHKLIVENGG FSMNLNNSVTHSVAADSKGIKYEAAKRH
Sbjct: 653  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGTFSMNLNNSVTHSVAADSKGIKYEAAKRH 712

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SWVLECCS KKLLPL PKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL
Sbjct: 713  GDVIHYSWVLECCSQKKLLPLMPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 772

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYR KYCPK EW                 KSDWD LLEL +RRLKV
Sbjct: 773  LSNVSRSEDVKAIDYYREKYCPKHEWCIFSGCQIYFHPLKPSLKSDWDALLELSVRRLKV 832

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSD+ VSATHIVVFC+PG P+ YE VLK CNEA+KHVMLKDK HI+ HQWLE
Sbjct: 833  EVSFRGGKVSDDRVSATHIVVFCIPGPPVKYEAVLKSCNEADKHVMLKDKTHIIGHQWLE 892

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERAQRLQEDAYSLNPN +K  EKL                              NSG
Sbjct: 893  DCLERAQRLQEDAYSLNPNTKKSIEKL------------------------------NSG 952

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            I SETP  S++I+NQ+  SPSKEYKD G N++AS QHMLS+ST+ S G KRGRPAA SMQ
Sbjct: 953  IGSETPSASENIDNQQIPSPSKEYKDLGGNESASGQHMLSHSTKGSGGKKRGRPAASSMQ 1012

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSEN-SEKEFKM 625
            KGKS +EQVRR   R  KGPAKI+EVESDSSDHT+EKTNAET NI TL SE+  + EF+M
Sbjct: 1013 KGKSSIEQVRRVLPRRTKGPAKINEVESDSSDHTNEKTNAETGNIGTLCSESLGKNEFRM 1072

Query: 626  LENERPDKKKRGRPTTRNTQKGKAGVEQVRRTRARIAKGSAKIGDVESDSSDSTDEKPKA 685
            LENERP KKKRG P  +NTQKGKA VEQVRRTRARIAKG         D SD TD K  A
Sbjct: 1073 LENERPVKKKRGSP-AKNTQKGKARVEQVRRTRARIAKG---------DGSDYTDVKTNA 1132

Query: 686  EETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGKLPEVNI 745
            EE  ME+GN+GTV ++NSKT+E KMLED DWKQKGKAIE IDVA+ KS            
Sbjct: 1133 EEAEMERGNVGTVCKDNSKTEELKMLEDCDWKQKGKAIEQIDVADTKS------------ 1192

Query: 746  CERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSETK---SSSTVLEEKQPVVHNNSE 804
                  + +E  EKLEVMTDPLQAMLLDMVPSLGMSETK   SSS+VLEEKQ        
Sbjct: 1193 ------KNSENSEKLEVMTDPLQAMLLDMVPSLGMSETKSSSSSSSVLEEKQ-------- 1205

[Close]

BLAST of Spg017126 vs. ExPASy TrEMBL
Match: A0A6J1D6X8 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 4.1e-249
Identity = 499/699 (71.39%), Postives = 535/699 (76.54%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNG TQRG ++SGWQDS RK+IKSTGK RKKSVSVVPSHLLQTDISGIKEDS
Sbjct: 593  SFVELVHSSNGNTQRGTDNSGWQDSNRKFIKSTGKRRKKSVSVVPSHLLQTDISGIKEDS 652

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPPTHSLDSLH+LIVENGG FSMNLN+SVTHSVAAD+KGIKYEAA+R 
Sbjct: 653  LIFSNMLFYIVNVPPTHSLDSLHRLIVENGGTFSMNLNDSVTHSVAADTKGIKYEAARRR 712

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SW+LECCS KKLLPLQPKHFLFLS HSKKKLEEEID FSDSYFWDLELADLKQL
Sbjct: 713  GDVIHYSWMLECCSQKKLLPLQPKHFLFLSDHSKKKLEEEIDAFSDSYFWDLELADLKQL 772

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYRGKYCPK EW                 K DWDVLLEL +RRLKV
Sbjct: 773  LSNVSRSEDVKAIDYYRGKYCPKDEWSIFVGFQIYFLPLRPSLKFDWDVLLELSMRRLKV 832

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSDN VSATH+VVFC+PGS +  ETVLK  NEAEKHV+LK+KIHIVAHQWLE
Sbjct: 833  EVSFRGGKVSDNHVSATHVVVFCIPGSSVDCETVLKCFNEAEKHVILKNKIHIVAHQWLE 892

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERA RLQEDAYSL PN +K  EKL                              NS 
Sbjct: 893  DCLERAHRLQEDAYSLKPNWKKSIEKL------------------------------NSD 952

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            IDSETP  S++ ENQK SSPS  YKD+GRN+AAS QHML +STERS G KRG+  ARSMQ
Sbjct: 953  IDSETPLASENTENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTARSMQ 1012

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSEN-SEKEFKM 625
            KGK  VEQVRRARARTAKGPAKISEVESDSSD+ DEKTNAET NI T  SEN    E   
Sbjct: 1013 KGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTNELTK 1072

Query: 626  LEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTRARIA 685
            LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTRAR A
Sbjct: 1073 LENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTRARTA 1132

Query: 686  KGSAKIGDVESDSSDSTDEKPKAEETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKA 745
            KGSAKIG VESDSSD+TD+K  AE  G+EK NIGTV   NS T+EF   E+ D   KGK 
Sbjct: 1133 KGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSHKGKV 1192

Query: 746  IEHIDVAEPKSNVQFGKLPEVNICERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSE 804
            IE  D+AE KSNV     PE+ I  RYN Q  E+ EKLEVMTDPLQAMLLDMVPSLGMSE
Sbjct: 1193 IEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSLGMSE 1252

[Close]

BLAST of Spg017126 vs. ExPASy TrEMBL
Match: A0A6J1D7W8 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 4.1e-249
Identity = 499/699 (71.39%), Postives = 535/699 (76.54%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNG TQRG ++SGWQDS RK+IKSTGK RKKSVSVVPSHLLQTDISGIKEDS
Sbjct: 594  SFVELVHSSNGNTQRGTDNSGWQDSNRKFIKSTGKRRKKSVSVVPSHLLQTDISGIKEDS 653

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
            LIFSNMLFYIVNVPPTHSLDSLH+LIVENGG FSMNLN+SVTHSVAAD+KGIKYEAA+R 
Sbjct: 654  LIFSNMLFYIVNVPPTHSLDSLHRLIVENGGTFSMNLNDSVTHSVAADTKGIKYEAARRR 713

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
            GDVIH SW+LECCS KKLLPLQPKHFLFLS HSKKKLEEEID FSDSYFWDLELADLKQL
Sbjct: 714  GDVIHYSWMLECCSQKKLLPLQPKHFLFLSDHSKKKLEEEIDAFSDSYFWDLELADLKQL 773

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSNV+RSEDVKAIDYYRGKYCPK EW                 K DWDVLLEL +RRLKV
Sbjct: 774  LSNVSRSEDVKAIDYYRGKYCPKDEWSIFVGFQIYFLPLRPSLKFDWDVLLELSMRRLKV 833

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EVSFRGG+VSDN VSATH+VVFC+PGS +  ETVLK  NEAEKHV+LK+KIHIVAHQWLE
Sbjct: 834  EVSFRGGKVSDNHVSATHVVVFCIPGSSVDCETVLKCFNEAEKHVILKNKIHIVAHQWLE 893

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            DC+ERA RLQEDAYSL PN +K  EKL                              NS 
Sbjct: 894  DCLERAHRLQEDAYSLKPNWKKSIEKL------------------------------NSD 953

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSMQ 565
            IDSETP  S++ ENQK SSPS  YKD+GRN+AAS QHML +STERS G KRG+  ARSMQ
Sbjct: 954  IDSETPLASENTENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTARSMQ 1013

Query: 566  KGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSEN-SEKEFKM 625
            KGK  VEQVRRARARTAKGPAKISEVESDSSD+ DEKTNAET NI T  SEN    E   
Sbjct: 1014 KGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTNELTK 1073

Query: 626  LEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTRARIA 685
            LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTRAR A
Sbjct: 1074 LENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTRARTA 1133

Query: 686  KGSAKIGDVESDSSDSTDEKPKAEETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKA 745
            KGSAKIG VESDSSD+TD+K  AE  G+EK NIGTV   NS T+EF   E+ D   KGK 
Sbjct: 1134 KGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSHKGKV 1193

Query: 746  IEHIDVAEPKSNVQFGKLPEVNICERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMSE 804
            IE  D+AE KSNV     PE+ I  RYN Q  E+ EKLEVMTDPLQAMLLDMVPSLGMSE
Sbjct: 1194 IEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSLGMSE 1253

[Close]

BLAST of Spg017126 vs. ExPASy TrEMBL
Match: A0A6J1D962 (DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 1.0e-247
Identity = 499/700 (71.29%), Postives = 535/700 (76.43%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            SFVELVHSSNG TQRG ++SGWQDS RK+IKSTGK RKKSVSVVPSHLLQTDISGIKEDS
Sbjct: 502  SFVELVHSSNGNTQRGTDNSGWQDSNRKFIKSTGKRRKKSVSVVPSHLLQTDISGIKEDS 561

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSK-GIKYEAAKR 265
            LIFSNMLFYIVNVPPTHSLDSLH+LIVENGG FSMNLN+SVTHSVAAD+K GIKYEAA+R
Sbjct: 562  LIFSNMLFYIVNVPPTHSLDSLHRLIVENGGTFSMNLNDSVTHSVAADTKAGIKYEAARR 621

Query: 266  HGDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQ 325
             GDVIH SW+LECCS KKLLPLQPKHFLFLS HSKKKLEEEID FSDSYFWDLELADLKQ
Sbjct: 622  RGDVIHYSWMLECCSQKKLLPLQPKHFLFLSDHSKKKLEEEIDAFSDSYFWDLELADLKQ 681

Query: 326  LLSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLK 385
            LLSNV+RSEDVKAIDYYRGKYCPK EW                 K DWDVLLEL +RRLK
Sbjct: 682  LLSNVSRSEDVKAIDYYRGKYCPKDEWSIFVGFQIYFLPLRPSLKFDWDVLLELSMRRLK 741

Query: 386  VEVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWL 445
            VEVSFRGG+VSDN VSATH+VVFC+PGS +  ETVLK  NEAEKHV+LK+KIHIVAHQWL
Sbjct: 742  VEVSFRGGKVSDNHVSATHVVVFCIPGSSVDCETVLKCFNEAEKHVILKNKIHIVAHQWL 801

Query: 446  EDCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNS 505
            EDC+ERA RLQEDAYSL PN +K  EKL                              NS
Sbjct: 802  EDCLERAHRLQEDAYSLKPNWKKSIEKL------------------------------NS 861

Query: 506  GIDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNKRGRPAARSM 565
             IDSETP  S++ ENQK SSPS  YKD+GRN+AAS QHML +STERS G KRG+  ARSM
Sbjct: 862  DIDSETPLASENTENQKISSPSNAYKDQGRNEAASGQHMLLHSTERSGGKKRGKSTARSM 921

Query: 566  QKGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSEN-SEKEFK 625
            QKGK  VEQVRRARARTAKGPAKISEVESDSSD+ DEKTNAET NI T  SEN    E  
Sbjct: 922  QKGKLSVEQVRRARARTAKGPAKISEVESDSSDYNDEKTNAETENIGTPCSENLKTNELT 981

Query: 626  MLEN------------------ERPDKKKRGRPTT-----RNTQKGKAGVEQVRRTRARI 685
             LEN                  ER  +KKRGR  T     R+ QKGKAGVEQ +RTRAR 
Sbjct: 982  KLENFDPSRKGKGIEHVPLCSTERTGEKKRGRRPTPTASARSMQKGKAGVEQGQRTRART 1041

Query: 686  AKGSAKIGDVESDSSDSTDEKPKAEETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGK 745
            AKGSAKIG VESDSSD+TD+K  AE  G+EK NIGTV   NS T+EF   E+ D   KGK
Sbjct: 1042 AKGSAKIGGVESDSSDTTDDKTNAEGNGVEKRNIGTVCPANSNTNEFIWPENCDSSHKGK 1101

Query: 746  AIEHIDVAEPKSNVQFGKLPEVNICERYNYQETEKCEKLEVMTDPLQAMLLDMVPSLGMS 804
             IE  D+AE KSNV     PE+ I  RYN Q  E+ EKLEVMTDPLQAMLLDMVPSLGMS
Sbjct: 1102 VIEQDDLAEFKSNV-----PEIEISTRYNCQGIEESEKLEVMTDPLQAMLLDMVPSLGMS 1161

[Close]

BLAST of Spg017126 vs. TAIR 10
Match: AT5G57160.1 (DNA ligase IV )

HSP 1 Score: 375.9 bits (964), Expect = 7.9e-104
Identity = 258/711 (36.29%), Postives = 373/711 (52.46%), Query Frame = 0


Query: 146  SFVELVHSSNGTTQRGANDSGWQDSKRKYIKSTGKGRKKSVSVVPSHLLQTDISGIKEDS 205
            +FVELV+SSNGTTQ+       QD+  K  KS+ +G KK+VS+VPS  +QTD+S IK  +
Sbjct: 595  AFVELVNSSNGTTQKQKESESTQDNP-KVNKSSKRGEKKNVSLVPSQFIQTDVSDIKGKT 654

Query: 206  LIFSNMLFYIVNVPPTHSLDSLHKLIVENGGKFSMNLNNSVTHSVAADSKGIKYEAAKRH 265
             IFSNM+FY VNVP +HSL++ HK++VENGGKFSMNLNNSVTH +AA+S GIKY+AAKR 
Sbjct: 655  SIFSNMIFYFVNVPRSHSLETFHKMVVENGGKFSMNLNNSVTHCIAAESSGIKYQAAKRQ 714

Query: 266  GDVIHCSWVLECCSLKKLLPLQPKHFLFLSGHSKKKLEEEIDEFSDSYFWDLELADLKQL 325
             DVIH SWVL+CCS  K+LPL PK+FL L+  S+ KL+++IDEFSDSY+WDL+L  LKQ+
Sbjct: 715  RDVIHFSWVLDCCSRNKMLPLLPKYFLHLTDASRTKLQDDIDEFSDSYYWDLDLEGLKQV 774

Query: 326  LSNVNRSEDVKAIDYYRGKYCPKREW-----------------KSDWDVLLELLIRRLKV 385
            LSN  +SED K+IDYY+ K CP++ W                  ++ + LL ++ +RL +
Sbjct: 775  LSNAKQSEDSKSIDYYKKKLCPEKRWSCLLSCCVYFYPYSQTLSTEEEALLGIMAKRLML 834

Query: 386  EVSFRGGEVSDNCVSATHIVVFCMPGSPMGYETVLKRCNEAEKHVMLKDKIHIVAHQWLE 445
            EV   GG+VS+N   A+H+VV  M   P+ +  V K  +E EK ++LK ++H+V+  WLE
Sbjct: 835  EVLMAGGKVSNNLAHASHLVVLAMAEEPLDFTLVSKSFSEMEKRLLLKKRLHVVSSHWLE 894

Query: 446  DCMERAQRLQEDAYSLNPNREKLTEKLYEIKICMLHLVLKWHLDCYIVAFCSLCFRRNSG 505
            + ++R ++L ED Y+L P                                          
Sbjct: 895  ESLQREEKLCEDVYTLRP------------------------------------------ 954

Query: 506  IDSETPWDSKHIENQKTSSPSKEYKDRGRNDAASVQHMLSYSTERSSGNK------RGRP 565
                     K++E   T     E  D+  +D   V    S  T+  + +K      RGR 
Sbjct: 955  ---------KYMEESDT-----EESDKSEHDTTEVASQGSAQTKEPASSKIAITSSRGRS 1014

Query: 566  AARSMQKGKSGVEQVRRARARTAKGPAKISEVESDSSDHTDEKTNAETRNIRTLNSENSE 625
              R++++G+S    ++R + R  K P+KIS  E++ SD ++EK +    +I         
Sbjct: 1015 NTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAE------- 1074

Query: 626  KEFKMLENERPDKKKRGRPTTRNTQKGKAGVEQVRRT-RARIAKGSAKIGDVESDSSDST 685
                  E +   + +R     +  ++GK+ V Q +R  R+R  K +AKIG  ESD +D  
Sbjct: 1075 ------ETDSFGEAQRNSSRGKCAKRGKSRVGQTQRVQRSRRGKKAAKIGGDESDENDEL 1134

Query: 686  DEKPKAEETGMEKGNIGTVREENSKTDEFKMLEDRDWKQKGKAIEHIDVAEPKSNVQFGK 745
            D          E+GN      EN +T E  + +  + +Q+   +   +  +   N +   
Sbjct: 1135 DGNNNV-SADAEEGNAAGRSVENEETREPDIAKYTESQQRDNTVAVEEALQDSRNAK--- 1194

Query: 746  LPEVNICERYNYQETEKCEKLEVMTDPLQAMLLDM--VPSLGMSETKSSSTVLEEKQPV- 804
                         E +  EKL++  DPLQAML+ M  +PS   +ET + +T    K  V 
Sbjct: 1195 ------------TEMDMKEKLQIHEDPLQAMLMKMFPIPSQKTTETSNRTTGEYRKANVS 1219

The following BLAST results are available for this feature:

BLAST of Spg017126 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889084.1	4.4e-266	74.70	DNA ligase 4 isoform X1 [Benincasa hispida]	[more]
XP_038889088.1	4.4e-266	74.70	DNA ligase 4 isoform X4 [Benincasa hispida] >XP_038889089.1 DNA ligase 4 isoform...	[more]
XP_038889086.1	4.4e-266	74.70	DNA ligase 4 isoform X3 [Benincasa hispida] >XP_038889087.1 DNA ligase 4 isoform...	[more]
XP_038889085.1	4.4e-266	74.70	DNA ligase 4 isoform X2 [Benincasa hispida]	[more]
XP_022996609.1	1.3e-254	73.64	DNA ligase 4 [Cucurbita maxima]	[more]

BLAST of Spg017126 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LL84	1.1e-102	36.29	DNA ligase 4 OS=Arabidopsis thaliana OX=3702 GN=LIG4 PE=1 SV=1	[more]
Q7X7E9	1.3e-47	27.79	Putative DNA ligase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=LIG4 PE=2 SV=2	[more]
Q8BTF7	9.0e-12	23.47	DNA ligase 4 OS=Mus musculus OX=10090 GN=Lig4 PE=2 SV=2	[more]
Q5R6L3	3.8e-10	26.74	DNA ligase 4 OS=Pongo abelii OX=9601 GN=DNL4 PE=2 SV=1	[more]
P49917	4.9e-10	26.16	DNA ligase 4 OS=Homo sapiens OX=9606 GN=LIG4 PE=1 SV=2	[more]

BLAST of Spg017126 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K974	6.5e-255	73.64	DNA ligase OS=Cucurbita maxima OX=3661 GN=LOC111491798 PE=3 SV=1	[more]
A0A6J1ENX2	3.9e-252	72.75	DNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111436208 PE=3 SV=1	[more]
A0A6J1D6X8	4.1e-249	71.39	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D7W8	4.1e-249	71.39	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]
A0A6J1D962	1.0e-247	71.29	DNA ligase OS=Momordica charantia OX=3673 GN=LOC111018188 PE=3 SV=1	[more]

BLAST of Spg017126 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57160.1	7.9e-104	36.29	DNA ligase IV	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 205..281 e-value: 8.4E-7 score: 38.6
IPR001357	BRCT domain	PFAM	PF16589	BRCT_2	coord: 206..289 e-value: 2.8E-16 score: 59.7
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 203..291 score: 17.123121
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 374..444 score: 11.22528
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 218..332 e-value: 1.6E-27 score: 98.0
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 340..444 e-value: 3.8E-10 score: 41.8
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 367..446
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 33..288
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 1..63 e-value: 7.9E-11 score: 42.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 655..682
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 631..649
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..682
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 552..620
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 523..537
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 765..787
None	No IPR available	PANTHER	PTHR45997:SF1	DNA LIGASE 4	coord: 146..444
None	No IPR available	CDD	cd17722	BRCT_DNA_ligase_IV_rpt1	coord: 207..293 e-value: 2.24096E-25 score: 98.5259
IPR029710	DNA ligase 4	PANTHER	PTHR45997	DNA LIGASE 4	coord: 146..444

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017126.1	Spg017126.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034645	cellular macromolecule biosynthetic process
biological_process	GO:0051103	DNA ligation involved in DNA repair
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003910	DNA ligase (ATP) activity