Spg017112 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017112
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNA-binding KH domain-containing protein PEPPER-like
Location	scaffold4: 40774734 .. 40783962 (-)
RNA-Seq Expression	Spg017112
Synteny	Spg017112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAAAAAAGGGAAAAGAACCGCATTTGCCATTTGCCTATTTCCTTCTTTCTTCCTTCGTTCTCTTAAAACCTCTGAAAGTCTTAACCCTAACTTCCCCCTTCTTCGTCTTCCTCGATGGCCACCAACACTACAGAGAACGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCCACACTTGCCTCTCTAGCTGCTGCAGAACCCGACTCTATCGAAGCCGGTGGCGCCGAATCCGACCTCGATCCCTCCAACCAAGACTACTTATCCGCTCCGGCTTCGGATTCTGCAGCCAATGAAGGCCCCAACCATACTGGCGCCTCCGATAAGAAGTGGCCTGGATGGCCTGGAGACTGCGTCTTCCGGCTTATTGTGCCGGTTGTTAAGGTCGGCAGCATTATTGGCCGCAAGGGCGATCTTATCAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCCGTTGGCACTCCTGATCGCGTTGTGAGTGTTTTTCTGACTTCAGCGCTTTCTCGTTGCTGTTTATTTTGCTGTAGGAATGGCTTTGTTACTCATGGTTACATTGGGACGACTAGTTGGATCTTTATCTTTATATTGGTTTATTTGTTATGTTTGGTTCCAGTTCCACAACATGGTCTTGTCGTGGGACTGTCTTGCTAGCTATCTCTCCAGCCCGGCCAATTTTATTTGTTTCTCGATGTATAGTTATCTCCATTTACGTGCCCTGAAGTTTCAAGGAAAGAGAAAAAGAAAAAAGATCAGGACATTCTCCCATCTTTGGCTGGTTCCATCAATTTCATACTAGTTTTTCATAACAAGTTATTTTCTACTTCTTTCACAGTAGCTGTCTGATATTAGGTTAACTAGTAGTATAAATGGAGCTTCTTTGGGACGAAAATGAACGTGAACCTATATTATTCTTCTTGTCACTTCATTAGGAGTACAGACTTGAAACATGTTCCATGGTGGTATAAGGCTCTTACAACCTGAAGTAGGAATAAGACTTGGAGACAAAAGGGTTTTTGTAATTTTTGTTAGGCTTAATTATTATGGACTGGAGTCCCTTTTTCTTTTTTGCATATTTAGTCTAGGTTTTGTTTGGATTCCTCTTGTTGAGCAATGTCCTTTTATTCTTTCAATTTTCTCAACCAAAGTCCAGTTTTTCATTTATAAAAAACAAAGACTTGAGGCAAAATATAACAGTGATCTGGATAATAACTTACATAAATCATGTGCATTTGTATAGGCTGTTTTTAACTTCATTTTGTTTACTGACCAGGCACTTCCCGATTGTCTTTCAATTTTAGAAGGTGGTAATATGTACTTGGTTTATTTAGAATATACACTTTATACTGGGAGGAGTGCCCAAATGATTGTGATTAGGTTCAATGAAGAACTGTAATATATAGAAGAGAGGTATAACTTTTCCTTTTAGGAGGCTGTTGCAATTACCCTTTAATTTTTTGATGCTTCACTTTGATATTCAAGAACACTTGGATGCATTCTTGTACAATTTCTTTTAAGTAGGAGATCTTGTTGAAACTTGTTCGTTCAGTTTTTAATGTTTAATGTTTACTTCAGGTGCTAATTTCAGGAAAAGAAGAGCCCGAGGCAGCCCTTTCCCCTGCAATGGATGCAGTTATAAGAGTCTTCAAACGCGTGTCTGGATTATCTGAGAATGAAGATGAGGCTAAAGCTTCATTTTGTTCAATCCGGTTATTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGAGCTTCTGTGAGAGTATTATCAGGAGGTATGCTTTCATTCTCTGTAAGGCACTTGTCATGTTCTTTTTCTGCTCGGTTTTGGGCCCTAGCTATATTTTTTTAAAGATCATGAAATCTACTAGATAGCTAAATTTCAGAGCCATCAGAATGGCTATTATTGAGGGAAAGAATAAGGCACACCCTTCAAAACCTCGCTGCAAGGGAAGGATCCTTCTACAGAATAATTATGCCCCCAAAGAACTAAGGGAATCAATAGAAGACCACCATAATTATGAGAAGTGCAAATGGGTCTGATAAAATTTGCTTGATTGGGGTCCCTTCCTTTAATCGGACCCCCTTTTGTTGGCTCTTTTTTTGTATACCCTTGTATTCTTTCATTCTTTTTCAATGAAAGTTGGCTTTTTATCCAAAAAAAAAAAAATGTCTACCTTACAAAGCTTTGGTTTGTGAAAAAGAACAATTTCCAGAGTATTATTAATATTAACTATAGTGTTTTTGATAAGCTACATCTTAATTCTTAACCCTTATTCCTAAACCCTTTTCATTTCACTCCAATTTTGTATCAATCGACTATTCGATTAGAGAGGTGAGTTGGTTAGGAAGAATTGTTTGTTTGCTCCCCCTTAAGATTGGGATCAAATGTTTGTAAGAGGTGGAAATTTGGGATGCCTCATTGCAAGATTGCCACCTCATAAGTTGTGTTAGAGTTTGGTAGTTCATAGAGACAGGATACTGAAAGAGCAGTGGTAGGCCCCCTTCCACGTAAACAATTAGTCTCTAATTGTAGACAAATTAGAAGTTCATCTTCAAAATAAGTACTCTTCTCAATGACTAGACAGTAAATCCCGCCCTTGAAGAAAATACCCACAAGAATCACTAGCATCAATGGGGACCACATTTTTACGTTTTACCTTTTACCATTGACTTAAAGATACCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAACTCTTCTTTAAAAGAAACCCCCATCTTATGGTTGTCTGGTTAAAGAGCTTACCTTGTTTCTTTCTAGAAGGAGGGACCTTGAGGTTGAAACTCCCCTTATTCATTAGCTCATTGAAAAGCCTTCCAGGAAAGGCATCTCTCGTGCTATTTTATTTTTGACATGTTTGTTTTGAAGGATTAGAGTTGGTAATTTAAGCAAAGAAAAATTTGTCGTTATCTCTTACGAACACTCTCTTTTTCCTTTTTAAAATCTTGGTTTGAATCATTCCCCTAAAAAGGTTATTTATATTTCTCTATTGTGTACTCCACCCAAAAAGTTTCTCCCTTGCCCAAAGGGTTATTACACTTCTTTTTTATGCACGTGGTATATTCTTTCATTTGCTCTATAGAAGTTTTTATTTTCAATAAAAGAAGGGATATTATGTATCCTGCAATTTGAAAACACTAGCCTAGGCACAGTATGAGCCTCCAAACTTTGTCATCAGGGGGTTTGCCTCTATGGTCTGACAGCTAGGATACAATATACAATCTAAGAAACTGAAAACAAAACTGGAAAATACAATCCTCTATCAATCTTCCCCAAGTTTACTACCATCTCCAATTTTGGGGGAATATGCTGGGGTGAATGGATACTTGCTTTTAACCACCTTATGCCAAAGGTATTCGCAGGTAGATTTCCACAGCATATCTAATGTCATTTTTATGTTTTCCATATTGATATTTCCTACAAGGCTCCCAAGCTCCATGGTCTTCCTATTGACCAAGTGCTCCCTCTCCTAATGAGGAAAAGTAATTGGGATCTTTGCAGGTTCAGATTAGATTAAGTAAATTTTGTTCCTTCAGAAAGTAGCCCCCCACCTACCTATCCATGGCTATGGAAATGCAATTCAAATGGACATTTCACTACTAAATCTCTATTGACTGATTTGGCCGCCCCATAACTTTGATCAATCCTTCTCTATCCAAAGCTATATGAAGAGGCCAATTGCCCAAGAATAAATTATCTCTTTGGGAATTATCTCACCAGGCTATTAATACAAAAGTACAGAGGTGTATACCTTATGTGGCCATCTCCTCAGACTGGTGCTCATCGTGTAAGGCTGGAAATGAATTACAGAGTCACCTTTTCCTCCATTGCTCTTTTGCTCGAAATCTTTGGGCCAAGATTATGCCTTCTTTGGAAGGAGGAACCATTGTATCTTCATAGAAGTGGAACAACCTTTTGACAAGTTCTTTGATAATGTCATTTATTTTGCTATATCTTGGTGTAAATGTTCCAACCCTGTTTCTTCATATAGCTATGCTTCCCTCCGAACCAATTGGGTAAGCCTTTTGTAACCATCATGAGGGTTTTCTCCTTTTTGTAAATTTCATTTATCAATTAAATTGTTTTTTATTAAAAAAAAGAAGAGAAAGAAAGAAGAAGTAGCCCCCCACCCCATCCAAATATTTTAAGTTTTCAGCAACCATATCAACCTCTGACTTTGGAATCCAAAGACTTGGGCTTTATCTTCAGATGAAATTTCCTTATATTTTTTTTTTTTTATAAAGAACAAATTTTCATTGAGAAAAAAATGAAAGAATACACGGGCATACAAAAAACAAGTCCACAAAAGAGGGTCCAACTAGAGAAAGGGATACCAATCAAGCAGAATAAGACCTAACCCCGTTTCTTCATATAGCTATGCTTCCCTCTTAACCAATTGGGTAAGCCTTTTGTAACCATCATGAGGGTTTTCTCCTTTTTGTAAATTTCATTTATCAATTAAATTGTTTTTTATTAAAAAAAAGAAGAGAAAGAAAGAAGAAGTAGCCCCCCACCCCATCCAAATATAATATTTTAAGTTTTCAGCAACCATATCAACCTCTGACTTTGGAATCCAAAGACTTGGGCTTTATCTTCAGATGAAATCTCCTTATATTTTTTTTTGATAAAGAACAAACTTTCATTGAGAAAAAATGAAAGAATACACGGGCATACCAAAAACAAGTCCACAAAAGGGGGTCCAACTAGAGAAAGGGACACCAATCAAGCATAATAAGACCTAATGGATAATCACAAAACACCTTAGAAACTGACGCCCAAAGAGATACATGAAATCTAGTGAGGGACCACACATCATCTGGATCCCTCTCCCGCCCCCTAAACACTCTATTATTTCTTTCTCCCCAAAGGTTCCAAAAAAAGCACACATCCCCGTATGCCGCAGAAATCTCGCTTTCTCTTGAAACGGTGGATGGAGGAGGAACTCCTCGATCATCTCCCAGTGATCGAAATCTCCTTATATTTTAATGGTCAAATAGAAATCAAGGTGTTGTCCAAGATATGTTTCACATGGCTTGTCCCAACCTTAGTGCCAGCATTAGGGGTATTACACAAGCGAACAAATAGATACAGCTACAATAGTTCAAAGGTACGGTGATAAAAGATGTACTTGCCTCAATCCCTTGGATGCAGCTTTATTCTGGTGAATTTTATGACCATTACTTTATCAAAGTTGCTTCCAGAACAAAATTTGAATCTAGAAGTGTGGTTGAGTTACAACTAAGGTTCATAAATTTTCAGGTTTTGGGCCTTTTAGCATTAGGAAATTTTTATGTGTGAGACCTTTTGTTTAACGAGACCTTGCTGACTATATTTTTCTTTTTGGTGCATTATATGTAAAAGTGATATGAGAATGTAAATCATCTCTCTTCATAATTGGAGTATGTAGTATAGGTTCATTCTCAAGTTTTGAGTATTATCTGGTCATCTTAGAGAAGCATACTTAATCTGATTCACTAACATCTTTCTCTTGCTGATAAATGGTAAAAGTGACCTAAAACTAAAAGTACATGACAATAGCAAGATAAAATAAGTATTTATTTTAACCTCCATTATATTATTATAAATCAAAGTGACCAAGCATGATGACTATTAACTTAAGCCTTGAGCTGCAGTCAGCAGGTGCAAGCAATTAATAATTTCCTGAGATAATAATGCATTTCCTGCTGTAGTCATTAGGCTATGAGTACTCTCTGAACATTCCGTACTCATCTACATTTGATGCTTGCAGATGAGATGCCATTCTATGCTGGTGTGGATGAGAGAATGGTGGAATTGCAGGGAGAATCCTTGAAGGTTCTCAAGGCTTTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTGTAAGTTTTTTCTTGTTAGATTTATGATCAACCTTTTCTTTTACCATATTTTAGGACTGCTAATGAATTCTTGCTACATCTTTTTTAGTTCAATACACCTGCCTCACAAGATCGCCAAACAGAAACCTGGGCTGACAAGTCCTCACTTCTTACTGCATCTCAAAGTGTAATCTCCACTGAGTATCCTCCATCTACAAAAAGAGAATCTCTGTTTCTTGACCGAGAAACTCATCTTGATTCTCACATTCCATCATCTGGTATTTCTCTCTATGGACAAGATCGAGTACTTCCTGCAATTCGATCATCAGGTGTTGCTCGCTCCGGTGCACCTATTGTAACTCAGGTTGGTATATGTTGCTCATTTATCCAGTTATTGGTAGAAAGAAATGGTTTGACTTAGTGGGGTAGTAAATTATCCCACCTTCCTTAATCAACAATATCGATCCATCATAGAATGTCCATTATTACAGTTAGGTGGTTTGTTTTTCGTCTAAAGGTCCACCAGGCAAGCTAGGAGCTTGTCCGCTTTACATGTCCATCTGTCTTGGAAACACTTGGTTCAAAATGTTATGGCATATTGCATACAAGTATTATTTAGCATAATGCTGAATGGAGGCAGCGGGGACAGACAGTAGTTACAGAGTTTATTTCTTTGTTATCTCTGATCAAGTCACCTCTTTGTGGTTCCTGTCAGGTTACTCAGACAATGCAGATCCCATTATCTTATGCCGAGGACATCATTGGGGTTGGAGGAACAAATATAGCATTCATTCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCTCAAGTTCAGATGGCTCAGCAATTAATTCAGGTAATATTTAAGTTTCCTTTTTAACTAATAACTTTGTAGTTAAGAGCTTTTCATAGGTCCATAGAGTTGTGATGGGATACTCTGTGTTTCTCATGTCATGCAAAAAGTTACTTTTATTTCATTTTGTAACTCTTTCCTTGGCCAAAGTTTTAGCCTCATTACACTAGACAGTTTTGGGTATCATTATGGATCACACTAAGATTCAAGGAAAAAAAATCTTTTTCCCCCAAGATAAAAAAAAAAGCAAGCAAATGGTAACTGCAAGAAATTTTTTTCCCTTTCTTAAAAAAGAATCATGGACATTAATAACTTTTCTTTTCAGAACGTCAATGAGGCTATTTGTAATTCTTATTTTTTTCTAAAGAGAGAGAGAGGCTATTTGTAACATAGATCTAGTATCTTTTAATTGTTTCGTAGCACTCGTTGCTTTCGAAGTTCACCCATGTTTTCCAATGTTATTTTTTTTTCTTTCAAAACGTGTTTAGTAACATGAACCATAAAAATAGATGTAGTTATTGTTGAGTTACTTAGTTGAATCTCAAATATTAGGTTAAACTACAAGTTTAGTTCTTGAAGTTTGAGGTTCTCATATTTGGTCCTTGAACTTAAAAATGTGTCTAATAGGTTTTTGAATTTTCAATTTTGTGTCCAATAGGTCCCTCAATATTAAAAGTGTTCGATAGGTCCTTGAATTTTCAATTGTGTTTAATAGGTTTAGACTATTTGACATTTTTAAAATTCTAGACCTACTAGAGACAAAATTGAAAGATTAGGATCCCATTAGAGATAAAATTAAATTTTATATATAATAAATTAGTTAATTATTAAAAATTTCTAATATTTCAGGGTGTTATTGAGCACAATTGAAAGTTTAGGGAGCTGTTAGACATTTTGTAAAGTTTAGGGACCTATTAGACATAAAATTGAAAATTCAGAAACCTATTAGAGAATTTATAAAGTTTAGAGACTAAATAGACACAAACTTGAAAGTTTAGGGACTAAACTTGTAATTGAATCCAAATATTATCAATGAATTTGTTAACATATTTAATGTTAGAAATTTTGTACAACTATTAATTTACAATGTTGTATAACTTGCCATATATTATGTTCTAAATGTTTTAATGTTAACAAAAATCAAATGAGTACCTAACATGAAATAGTATATTTACCAAAGTTAAACTTTTTTTTAGTGTGATTCTATGTTTTCATATTTCATATTTAAGACACTGAAAATGTAGAAAGGTTGTTTTCACATTTTTCACTTGTTGGATCACAAAACCCAAAATTAGGCCCTTAGTGTTGTGAACTATTTTGTTTGTAATAATCCTCTGTAACACTACAAGGATGGCTTCAAAAGTGAGCTTAAAGGGCCAGTAAAACTGAAACATAAAAGATTCCCGTTATCGTGTGAAAGTCATTATTCATAATGATATGAAAAAAAGCAAATGAAGTGAAACTCTCCACCATTTTTTTATGTTAGGAGTAGGATGAGTCACGATGCCTTTTTTTTTCTTTTACTTTTTTTCCCCTTATTATAATAAAGAAAAGGACCGTGATTCTGGTTCCCAAGAGATCCCAACTCAAATGGCACTATGACATTATTAATGCATATGTTGATTAGCAAAAATTAGTCTAATCTTTACATATTTATGATCTTTTGCTTGTATTGTTCTTGTAGGAAGCAGTAAGTGGCCCCAAGGAACCAGTAACAAGCAGTAGCTATGGCAGGCTAGACACAACAGGCTTGCGGTCATCCTACTCCCAGTTGGCTGCTTCAGGTTCATCTTACACTTCATCCTCTTTATCTTCACAATCATATGGTGGATATGGTTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGAATTGATTGATCTGCAGATTCATATCCACTCGGATTTGATCCGGTTCAGATTAATTATTGTTAAGAGGATGAATGAATTATGTTGGAATGTAGTTCTTGTAAAGTCAGCTTAAAGTAGTTAAAAACGTTTTTATTACCCTCTCTGGCATATTGAAACTGATTCAGCTGGGTAGATTTGTCTACGTTTTTTTCTTTTTCAGTGTTGATGTGTTTGTTTCTGAGTAGGTTTTCTTTTATTTAGTCGCTTCAGGTCATCAAATTTCTTTCCTCACTTATCTTGGAGAATTCAAATTAACTTAAATATTGAAAAACTGGACTGTATCTTAGAATTCTTAAGTTGATAGGTTTATAGTGTCTTTTATCTTCAAAAAGAATGCTGGTATGATTGAATTTGGAAGATAGTGTTGTTGAAGTCTAGAAACAGGAATTAGGGATTTGCAGGTGGTTGGAAATTTGAGTTTAAGGAAAG

mRNA sequence

ATGGCCACCAACACTACAGAGAACGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCCACACTTGCCTCTCTAGCTGCTGCAGAACCCGACTCTATCGAAGCCGGTGGCGCCGAATCCGACCTCGATCCCTCCAACCAAGACTACTTATCCGCTCCGGCTTCGGATTCTGCAGCCAATGAAGGCCCCAACCATACTGGCGCCTCCGATAAGAAGTGGCCTGGATGGCCTGGAGACTGCGTCTTCCGGCTTATTGTGCCGGTTGTTAAGGTCGGCAGCATTATTGGCCGCAAGGGCGATCTTATCAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCCGTTGGCACTCCTGATCGCGTTGTGCTAATTTCAGGAAAAGAAGAGCCCGAGGCAGCCCTTTCCCCTGCAATGGATGCAGTTATAAGAGTCTTCAAACGCGTGTCTGGATTATCTGAGAATGAAGATGAGGCTAAAGCTTCATTTTGTTCAATCCGGTTATTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGAGCTTCTGTGAGAGTATTATCAGGAGGATTAGAGTTGCTCCATGGTCTTCCTATTGACCAAGTGCTCCCTCTCCTAATGAGGAAAAGTAATTGGGATCTTTGCAGGCTATTAATACAAAAGTACAGAGGTGTATACCTTATGTGGCCATCTCCTCAGACTGGTGCTCATCGTGTAAGGCTGGAAATGAATTACAGAGTCACCTTTTCCTCCATTGCTCTTTTGCTCGAAATCTTTGGGCCAAGATTATGCCTTCTTTGGAAGGAGGAACCATTGTATCTTCATAGAAATGAGATGCCATTCTATGCTGGTGTGGATGAGAGAATGGTGGAATTGCAGGGAGAATCCTTGAAGGTTCTCAAGGCTTTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTCAATACACCTGCCTCACAAGATCGCCAAACAGAAACCTGGGCTGACAAGTCCTCACTTCTTACTGCATCTCAAAGTGTAATCTCCACTGAGTATCCTCCATCTACAAAAAGAGAATCTCTGTTTCTTGACCGAGAAACTCATCTTGATTCTCACATTCCATCATCTGGTATTTCTCTCTATGGACAAGATCGAGTACTTCCTGCAATTCGATCATCAGGTGTTGCTCGCTCCGGTGCACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCATTATCTTATGCCGAGGACATCATTGGGGTTGGAGGAACAAATATAGCATTCATTCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCTCAAGTTCAGATGGCTCAGCAATTAATTCAGGAAGCAGTAAGTGGCCCCAAGGAACCAGTAACAAGCAGTAGCTATGGCAGGCTAGACACAACAGGCTTGCGGTCATCCTACTCCCAGTTGGCTGCTTCAGGTTCATCTTACACTTCATCCTCTTTATCTTCACAATCATATGGTGGATATGGTTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGA

Coding sequence (CDS)

ATGGCCACCAACACTACAGAGAACGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCCACACTTGCCTCTCTAGCTGCTGCAGAACCCGACTCTATCGAAGCCGGTGGCGCCGAATCCGACCTCGATCCCTCCAACCAAGACTACTTATCCGCTCCGGCTTCGGATTCTGCAGCCAATGAAGGCCCCAACCATACTGGCGCCTCCGATAAGAAGTGGCCTGGATGGCCTGGAGACTGCGTCTTCCGGCTTATTGTGCCGGTTGTTAAGGTCGGCAGCATTATTGGCCGCAAGGGCGATCTTATCAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCCGTTGGCACTCCTGATCGCGTTGTGCTAATTTCAGGAAAAGAAGAGCCCGAGGCAGCCCTTTCCCCTGCAATGGATGCAGTTATAAGAGTCTTCAAACGCGTGTCTGGATTATCTGAGAATGAAGATGAGGCTAAAGCTTCATTTTGTTCAATCCGGTTATTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCTATACAGGAGAGTACAGGAGCTTCTGTGAGAGTATTATCAGGAGGATTAGAGTTGCTCCATGGTCTTCCTATTGACCAAGTGCTCCCTCTCCTAATGAGGAAAAGTAATTGGGATCTTTGCAGGCTATTAATACAAAAGTACAGAGGTGTATACCTTATGTGGCCATCTCCTCAGACTGGTGCTCATCGTGTAAGGCTGGAAATGAATTACAGAGTCACCTTTTCCTCCATTGCTCTTTTGCTCGAAATCTTTGGGCCAAGATTATGCCTTCTTTGGAAGGAGGAACCATTGTATCTTCATAGAAATGAGATGCCATTCTATGCTGGTGTGGATGAGAGAATGGTGGAATTGCAGGGAGAATCCTTGAAGGTTCTCAAGGCTTTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTCAATACACCTGCCTCACAAGATCGCCAAACAGAAACCTGGGCTGACAAGTCCTCACTTCTTACTGCATCTCAAAGTGTAATCTCCACTGAGTATCCTCCATCTACAAAAAGAGAATCTCTGTTTCTTGACCGAGAAACTCATCTTGATTCTCACATTCCATCATCTGGTATTTCTCTCTATGGACAAGATCGAGTACTTCCTGCAATTCGATCATCAGGTGTTGCTCGCTCCGGTGCACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCATTATCTTATGCCGAGGACATCATTGGGGTTGGAGGAACAAATATAGCATTCATTCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCTCAAGTTCAGATGGCTCAGCAATTAATTCAGGAAGCAGTAAGTGGCCCCAAGGAACCAGTAACAAGCAGTAGCTATGGCAGGCTAGACACAACAGGCTTGCGGTCATCCTACTCCCAGTTGGCTGCTTCAGGTTCATCTTACACTTCATCCTCTTTATCTTCACAATCATATGGTGGATATGGTTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGA

Protein sequence

MATNTTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASDSAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLIQKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEMPFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSSGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

Homology

[Close]

BLAST of Spg017112 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 805.4 bits (2079), Expect = 3.0e-229
Identity = 447/557 (80.25%), Postives = 455/557 (81.69%), Query Frame = 0


Query: 3   TNTTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASDSAA 62
           T TTENGSTDANALNSNPQ+STL+SLAAAEPDS EAGG ESD+DPSN+DYLS PASDSAA
Sbjct: 4   TTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASDSAA 63

Query: 63  NEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 122
            EGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA
Sbjct: 64  YEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGA 123

Query: 123 VGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 182
           VGTPDRVVLISGKEE +A LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA
Sbjct: 124 VGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQA 183

Query: 183 INLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLIQKY 242
           INLIGKQGSLIKSIQESTGASVRVLSG                                 
Sbjct: 184 INLIGKQGSLIKSIQESTGASVRVLSG--------------------------------- 243

Query: 243 RGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEMPFY 302
                                                                 +EMPFY
Sbjct: 244 ------------------------------------------------------DEMPFY 303

Query: 303 AGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTETWAD 362
           AG DERMVELQGESLKVLKALE VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQ +TWAD
Sbjct: 304 AGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWAD 363

Query: 363 KSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSSGVA 422
           KSSLLTASQS+ISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLP IRSSGV 
Sbjct: 364 KSSLLTASQSIISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVG 423

Query: 423 RSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 482
           RSG PIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK
Sbjct: 424 RSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIK 473

Query: 483 GTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQS 542
           GTSSQVQMAQQLIQEAVS PKEPVTSSSYGRLD TGLRSSYSQLAASGSSYTSSSLSSQS
Sbjct: 484 GTSSQVQMAQQLIQEAVSAPKEPVTSSSYGRLDATGLRSSYSQLAASGSSYTSSSLSSQS 473

Query: 543 YGGYGSSGLGGYSTFRL 560
           YGGYGSSGLGGYSTFRL
Sbjct: 544 YGGYGSSGLGGYSTFRL 473

[Close]

BLAST of Spg017112 vs. NCBI nr
Match: XP_023538336.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 773.5 bits (1996), Expect = 1.3e-219
Identity = 432/560 (77.14%), Postives = 448/560 (80.00%), Query Frame = 0


Query: 1   MATN-TTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATN TTENGSTDA+ALNS+PQ   LA  AAAEPDS EAGGAESD+DPSNQDYLSAPASD
Sbjct: 1   MATNATTENGSTDADALNSSPQ---LACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASD 60

Query: 61  SAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
              +E PNH GASDKKWPGWPGDCVFR+IVPVVKVGSIIGR+GDLIKK+CEETRARIRVL
Sbjct: 61  YVPHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEA LSPAMDAV+R+FKRVSG SENEDEAKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLI 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSG                              
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSG------------------------------ 240

Query: 241 QKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEM 300
                                                                    +EM
Sbjct: 241 ---------------------------------------------------------DEM 300

Query: 301 PFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360
           PFYAG DERMVELQGE+LKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQT+ 
Sbjct: 301 PFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDA 360

Query: 361 WADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSS 420
           WADKSSLL+ASQSVIS EYPPS+KRESLF DRETHLDSHI SSGISLYG DRVLPAIRSS
Sbjct: 361 WADKSSLLSASQSVISNEYPPSSKRESLFFDRETHLDSHISSSGISLYGPDRVLPAIRSS 420

Query: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 480
           GV RSG PIVTQVTQTMQIPLSYAEDIIGVGG NIAFIRRNSGAILTIQESRGLPDEITV
Sbjct: 421 GVGRSGVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITV 470

Query: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLS 540
           EIKGTSSQVQMAQQLIQEA+SGPKEPVTSSSYGRLDTTGLRSSYSQL ASGSSYT SSLS
Sbjct: 481 EIKGTSSQVQMAQQLIQEAISGPKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLS 470

Query: 541 SQSYGGYGSSGLGGYSTFRL 560
           SQSYGGYGSSGLGGYSTFRL
Sbjct: 541 SQSYGGYGSSGLGGYSTFRL 470

[Close]

BLAST of Spg017112 vs. NCBI nr
Match: XP_022938096.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata])

HSP 1 Score: 768.5 bits (1983), Expect = 4.1e-218
Identity = 432/560 (77.14%), Postives = 447/560 (79.82%), Query Frame = 0


Query: 1   MATN-TTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATN TTENGSTDA+ALNS+ Q   LA  AA EPDS EA GAES +DPSNQDYLSAPASD
Sbjct: 1   MATNTTTENGSTDADALNSSAQ---LAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASD 60

Query: 61  SAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           S  +E PNH GASDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEETRARIRVL
Sbjct: 61  SLPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEA  SPAMDAV+RVFKRVSG SENEDEAKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLI 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSG                              
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSG------------------------------ 240

Query: 241 QKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEM 300
                                                                    +EM
Sbjct: 241 ---------------------------------------------------------DEM 300

Query: 301 PFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360
           PFYAG DERMVELQGE+LKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQT++
Sbjct: 301 PFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDS 360

Query: 361 WADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSS 420
           WADKSSLL+ASQSVISTEYPPS+KRESLFLDRETHLDSHI SSGISLYG DRVLPAIRSS
Sbjct: 361 WADKSSLLSASQSVISTEYPPSSKRESLFLDRETHLDSHISSSGISLYGPDRVLPAIRSS 420

Query: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 480
           GV RSG PIVTQVTQTMQIPLSYAEDIIGVGG NIAFIRRNSGAILTIQESRGLPDEITV
Sbjct: 421 GVGRSGVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITV 470

Query: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLS 540
           EIKGTSSQVQMAQQLIQEA+SGPKEPVTSSSYGRLDTTGLRSSYSQL ASGSSYT SSLS
Sbjct: 481 EIKGTSSQVQMAQQLIQEAISGPKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLS 470

Query: 541 SQSYGGYGSSGLGGYSTFRL 560
           SQSYGGYGSSGLGGYSTFRL
Sbjct: 541 SQSYGGYGSSGLGGYSTFRL 470

[Close]

BLAST of Spg017112 vs. NCBI nr
Match: XP_022149911.1 (RNA-binding KH domain-containing protein PEPPER [Momordica charantia])

HSP 1 Score: 767.7 bits (1981), Expect = 6.9e-218
Identity = 436/564 (77.30%), Postives = 449/564 (79.61%), Query Frame = 0


Query: 1   MATN-TTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATN   ENGSTDA+A+NSNPQ+STL S+AAAE DS EAGGAESDLDPSN DYLS PASD
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60

Query: 61  SAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           S A E  NHTG+SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRVL
Sbjct: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEA LSPAMDAVIRVFKRVSG SENED+ KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLI 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSG                              
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSG------------------------------ 240

Query: 241 QKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEM 300
                                                                    +EM
Sbjct: 241 ---------------------------------------------------------DEM 300

Query: 301 PFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360
           PFYAG DERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNT ASQDRQT+T
Sbjct: 301 PFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDT 360

Query: 361 WADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSS 420
           WADKSSL TASQSVISTEYPP+TKRESLF DRE+HLDSH+ SSGISLYGQDR+LP IRSS
Sbjct: 361 WADKSSLHTASQSVISTEYPPATKRESLFHDRESHLDSHMASSGISLYGQDRILPGIRSS 420

Query: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 480
           GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV
Sbjct: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 476

Query: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSY----TS 540
           EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLD  GLRSSYSQLA SGSSY    TS
Sbjct: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLD-AGLRSSYSQLAGSGSSYTSSFTS 476

Query: 541 SSLSSQSYGGYGSSGLGGYSTFRL 560
           SSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 541 SSLSSQSYGGYGSSGLGGYSTFRL 476

[Close]

BLAST of Spg017112 vs. NCBI nr
Match: KAG7029848.1 (RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 765.4 bits (1975), Expect = 3.4e-217
Identity = 432/561 (77.01%), Postives = 449/561 (80.04%), Query Frame = 0


Query: 1   MATNT-TENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATNT T+NGSTDANALN NP++S LAS+AAAEPDS+EAGGAESDLDPSNQDYLSAPASD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SA-ANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA  +E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+PEA LSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLL 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSG                             
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSG----------------------------- 240

Query: 241 IQKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNE 300
                                                                     +E
Sbjct: 241 ----------------------------------------------------------DE 300

Query: 301 MPFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTE 360
           MPFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVD SVLPLFEKSFNTP SQDRQ +
Sbjct: 301 MPFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMD 360

Query: 361 TWADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRS 420
            WADKSSLLTASQSVIS EYP STKRESL+LDRE +LDS+IPSSGISLYGQDRVLP IRS
Sbjct: 361 AWADKSSLLTASQSVISAEYPSSTKRESLYLDREAYLDSYIPSSGISLYGQDRVLPTIRS 420

Query: 421 SGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEIT 480
           SGV RSG PIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEIT
Sbjct: 421 SGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEIT 474

Query: 481 VEIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSL 540
           VEIKGTS+QVQMAQQLIQEAVS PKEPVTSSSYGRLDT+G+RSSYSQL A+GSSYTSSSL
Sbjct: 481 VEIKGTSAQVQMAQQLIQEAVSAPKEPVTSSSYGRLDTSGMRSSYSQLDAAGSSYTSSSL 474

Query: 541 SSQSYGGYGSSGLGGYSTFRL 560
           SSQ YGGYGSSGLGGYSTFRL
Sbjct: 541 SSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of Spg017112 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.0e-114
Identity = 261/543 (48.07%), Postives = 331/543 (60.96%), Query Frame = 0


Query: 53  LSAPASDSAANEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 112
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 113 TRARIRVLDGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDE----AK 172
           TRARI+VLDG V TPDR+VLISGKEEPEA +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 173 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLM 232
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS                   
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILS------------------- 222

Query: 233 RKSNWDLCRLLIQKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLW 292
                                                                       
Sbjct: 223 ------------------------------------------------------------ 282

Query: 293 KEEPLYLHRNEMPFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSF 352
                     E PFYA  DER+V+LQGE+LK+LKALEA+VGHLR+FLVDH+V+PLFEK +
Sbjct: 283 --------EEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHTVVPLFEKQY 342

Query: 353 NTPASQDRQTETWAD-KSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISL 412
               SQ RQ E  A+ KSSL T S +++  ++    +RE LFL+R++ +DS +  SG+S+
Sbjct: 343 LARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSRVDSRVQPSGVSI 402

Query: 413 YGQDRVLPAIRSSGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 472
           Y QD VL A  S G+AR  +  VTQV+QTMQIP SYAEDIIGV G NIA+IRR SGA +T
Sbjct: 403 YSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATIT 462

Query: 473 IQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSGPKEPVT-SSSYGRLDTTGL------ 532
           I+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KEPV+ S  Y R+D+  +      
Sbjct: 463 IKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQ 495

Query: 533 ---------------------RSSYSQLAASGSSYTSSSLSSQSYGG--YGSSGLGGYST 560
                                 ++YSQL   G S  + +L+ Q+YG     +S +GGYS+
Sbjct: 523 LSNRQEPLPSTYMGTEPVQYRPTAYSQL--GGPSTYTPTLTGQTYGSEYRPASDVGGYSS 495

[Close]

BLAST of Spg017112 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.7e-63
Identity = 179/500 (35.80%), Postives = 241/500 (48.20%), Query Frame = 0


Query: 70  GASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 129
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 130 VLISGKEEPEAALSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIG 189
           V++SGKEEPE++L P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 190 KQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLIQKYRGVYL 249
           KQG  +K+IQE++   VRVL                                        
Sbjct: 294 KQGGTVKAIQEASACIVRVLGS-------------------------------------- 353

Query: 250 MWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEMPFYAGVDE 309
                                                             ++P +A  D+
Sbjct: 354 -------------------------------------------------EDLPVFALQDD 413

Query: 310 RMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQ-DRQTETWADKSSL 369
           R+VE+ GE   V +ALE +  HLRKFLVD S++P FE     P  Q D            
Sbjct: 414 RVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPP 473

Query: 370 LTASQSVISTEY--------PPSTKRESLFLDRETHLD--SHIPSSGISLYGQDRVLPAI 429
              + SV    Y         P  + +S +   E         P  GIS YG++  +   
Sbjct: 474 QGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPM--- 533

Query: 430 RSSGVARSGAP--IVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLP 489
               V  S AP  +  QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P
Sbjct: 534 ---NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVP 575

Query: 490 DEITVEIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYT 549
            E+TVE+ GT SQVQ A QLIQ  ++    P  +           +  Y+  A  GS Y 
Sbjct: 594 GEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPAPAQPQ---TVAPEQQGYNPYATHGSVYA 575

Query: 550 SSSLSSQSYGGYGSSGLGGY 555
           ++  +    GGY +    GY
Sbjct: 654 AAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of Spg017112 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.1e-15
Identity = 104/431 (24.13%), Postives = 175/431 (40.60%), Query Frame = 0


Query: 82  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEEPEAA 141
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E PE  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 142 LSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 201
            SPA  A++ +F R+  L+ N+  D    S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 202 TGASVRVLSGGLELLHGLPIDQVLPLL-----MRKSNWDLCRLLIQKYRGVYLMWPSPQT 261
           TGA++++L            DQV+ +      +R++ + +   L                
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSV------------ 630

Query: 262 GAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEMPFYAGVDERMVELQG 321
                   M   +  SS AL  E F  R      + PL +  ++       +   +  + 
Sbjct: 631 ----FSNSMKNSLAKSSSALTTERFYDR----QSDNPLSIGSHQSVSNPATNSSSLHRRS 690

Query: 322 ESLKVLKALEAVVGHLRKFLVDHSVLP--LFEKSFNTPASQD-----RQTETWADKSSLL 381
           E    L    + V + R    D  + P   F   FN  A        R T   +D S  L
Sbjct: 691 ED-SFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHL 750

Query: 382 TASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSSGVARSG-- 441
           T + S +    PP+  R                     L      L + R+  V  SG  
Sbjct: 751 TEAPSRLWASPPPAAPR--------------------GLSDASGGLSSARAGHVLGSGHK 810

Query: 442 APIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQE-SRGLPDEITVEIKGT 496
           + IVT  T  +++P +    + G  G N+  +R+ SGA + I E   G  D I V I GT
Sbjct: 811 SAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIV-ISGT 839

[Close]

BLAST of Spg017112 vs. ExPASy Swiss-Prot
Match: Q15366 (Poly(rC)-binding protein 2 OS=Homo sapiens OX=9606 GN=PCBP2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 9.7e-13
Identity = 48/122 (39.34%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 86  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEEPEAALSPA 145
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R++ ++G   P  A+  A
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTNAIFKA 76

Query: 146 MDAVI-RVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 205
              +I ++ + +S    N   A     ++RL+V ++Q  +LIGK G  IK I+ESTGA V
Sbjct: 77  FAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 133

Query: 206 RV 207
           +V
Sbjct: 137 QV 133

[Close]

BLAST of Spg017112 vs. ExPASy Swiss-Prot
Match: Q61990 (Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 9.7e-13
Identity = 48/122 (39.34%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 86  RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEEPEAALSPA 145
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R++ ++G   P  A+  A
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAG---PTNAIFKA 76

Query: 146 MDAVI-RVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 205
              +I ++ + +S    N   A     ++RL+V ++Q  +LIGK G  IK I+ESTGA V
Sbjct: 77  FAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 133

Query: 206 RV 207
           +V
Sbjct: 137 QV 133

[Close]

BLAST of Spg017112 vs. ExPASy TrEMBL
Match: A0A6J1FC72 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111444285 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 2.0e-218
Identity = 432/560 (77.14%), Postives = 447/560 (79.82%), Query Frame = 0


Query: 1   MATN-TTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATN TTENGSTDA+ALNS+ Q   LA  AA EPDS EA GAES +DPSNQDYLSAPASD
Sbjct: 1   MATNTTTENGSTDADALNSSAQ---LAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASD 60

Query: 61  SAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           S  +E PNH GASDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEETRARIRVL
Sbjct: 61  SLPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEA  SPAMDAV+RVFKRVSG SENEDEAKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLI 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSG                              
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSG------------------------------ 240

Query: 241 QKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEM 300
                                                                    +EM
Sbjct: 241 ---------------------------------------------------------DEM 300

Query: 301 PFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360
           PFYAG DERMVELQGE+LKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQT++
Sbjct: 301 PFYAGPDERMVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDS 360

Query: 361 WADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSS 420
           WADKSSLL+ASQSVISTEYPPS+KRESLFLDRETHLDSHI SSGISLYG DRVLPAIRSS
Sbjct: 361 WADKSSLLSASQSVISTEYPPSSKRESLFLDRETHLDSHISSSGISLYGPDRVLPAIRSS 420

Query: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 480
           GV RSG PIVTQVTQTMQIPLSYAEDIIGVGG NIAFIRRNSGAILTIQESRGLPDEITV
Sbjct: 421 GVGRSGVPIVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITV 470

Query: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLS 540
           EIKGTSSQVQMAQQLIQEA+SGPKEPVTSSSYGRLDTTGLRSSYSQL ASGSSYT SSLS
Sbjct: 481 EIKGTSSQVQMAQQLIQEAISGPKEPVTSSSYGRLDTTGLRSSYSQLGASGSSYTPSSLS 470

Query: 541 SQSYGGYGSSGLGGYSTFRL 560
           SQSYGGYGSSGLGGYSTFRL
Sbjct: 541 SQSYGGYGSSGLGGYSTFRL 470

[Close]

BLAST of Spg017112 vs. ExPASy TrEMBL
Match: A0A6J1D9V1 (RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 GN=LOC111018213 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 3.4e-218
Identity = 436/564 (77.30%), Postives = 449/564 (79.61%), Query Frame = 0


Query: 1   MATN-TTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATN   ENGSTDA+A+NSNPQ+STL S+AAAE DS EAGGAESDLDPSN DYLS PASD
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60

Query: 61  SAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           S A E  NHTG+SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEET+ARIRVL
Sbjct: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEA LSPAMDAVIRVFKRVSG SENED+ KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLI 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSG                              
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSG------------------------------ 240

Query: 241 QKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEM 300
                                                                    +EM
Sbjct: 241 ---------------------------------------------------------DEM 300

Query: 301 PFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360
           PFYAG DERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNT ASQDRQT+T
Sbjct: 301 PFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDT 360

Query: 361 WADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSS 420
           WADKSSL TASQSVISTEYPP+TKRESLF DRE+HLDSH+ SSGISLYGQDR+LP IRSS
Sbjct: 361 WADKSSLHTASQSVISTEYPPATKRESLFHDRESHLDSHMASSGISLYGQDRILPGIRSS 420

Query: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 480
           GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV
Sbjct: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 476

Query: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSY----TS 540
           EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLD  GLRSSYSQLA SGSSY    TS
Sbjct: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLD-AGLRSSYSQLAGSGSSYTSSFTS 476

Query: 541 SSLSSQSYGGYGSSGLGGYSTFRL 560
           SSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 541 SSLSSQSYGGYGSSGLGGYSTFRL 476

[Close]

BLAST of Spg017112 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 3.7e-217
Identity = 434/560 (77.50%), Postives = 446/560 (79.64%), Query Frame = 0


Query: 1   MATN-TTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATN TT+NGSTDA A   NPQ+STL SLAAAE DS E G  +SD+DPSNQDY S P SD
Sbjct: 1   MATNTTTDNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSD 60

Query: 61  SAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAA+E  +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE ++ LSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLI 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSG                              
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSG------------------------------ 240

Query: 241 QKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEM 300
                                                                    +EM
Sbjct: 241 ---------------------------------------------------------DEM 300

Query: 301 PFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360
           PFYAG DERMVELQGESLKVLKALE VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET
Sbjct: 301 PFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360

Query: 361 WADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSS 420
           WADKSSLLTASQS+IS EYPPSTKRESLFLDRETHLDSHI SSGISLYGQDRVLP IRSS
Sbjct: 361 WADKSSLLTASQSIISAEYPPSTKRESLFLDRETHLDSHISSSGISLYGQDRVLPTIRSS 420

Query: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 480
           GV RSG PIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV
Sbjct: 421 GVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 470

Query: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLS 540
           EIKGTSSQVQMAQQLIQEAV+ PKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLS
Sbjct: 481 EIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLS 470

Query: 541 SQSYGGYGSSGLGGYSTFRL 560
           SQSYGGYGSSGLGGY+TFRL
Sbjct: 541 SQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of Spg017112 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 1.1e-216
Identity = 431/561 (76.83%), Postives = 447/561 (79.68%), Query Frame = 0


Query: 1   MATNT-TENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATNT T+NGSTDANALN NP++S LAS+AAAEPDS+EAGGAESDLDPSNQDYLSAPASD
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SA-ANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
           SA  +E PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+PEA LSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLL 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSG                             
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSG----------------------------- 240

Query: 241 IQKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNE 300
                                                                     +E
Sbjct: 241 ----------------------------------------------------------DE 300

Query: 301 MPFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTE 360
           MPFYAG DERMVELQGESLKVLKALEAVVGHLRKFLVD SVLPLFEKSFNTP SQDRQ +
Sbjct: 301 MPFYAGADERMVELQGESLKVLKALEAVVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMD 360

Query: 361 TWADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRS 420
            WADKSSLLTASQSVIS EYP STKRESL+LDRE +LDS+IPSSGISLYGQDRVLP IRS
Sbjct: 361 AWADKSSLLTASQSVISAEYPSSTKRESLYLDREAYLDSYIPSSGISLYGQDRVLPTIRS 420

Query: 421 SGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEIT 480
           SGV RSG PIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEIT
Sbjct: 421 SGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEIT 474

Query: 481 VEIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSL 540
           VEIKGTSSQVQMAQQLIQEAVS PKEPVTSSSYGRL+ +G+RSSYSQL ASGSSYTSSSL
Sbjct: 481 VEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYGRLEASGMRSSYSQLDASGSSYTSSSL 474

Query: 541 SSQSYGGYGSSGLGGYSTFRL 560
           SSQ YGGYGSSGLGGYSTFRL
Sbjct: 541 SSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of Spg017112 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 3.1e-216
Identity = 433/560 (77.32%), Postives = 442/560 (78.93%), Query Frame = 0


Query: 1   MATN-TTENGSTDANALNSNPQTSTLASLAAAEPDSIEAGGAESDLDPSNQDYLSAPASD 60
           MATN TTENGSTDA     NP +STL SLAAAEPDS EAG  +SD DPSNQDY S P SD
Sbjct: 1   MATNTTTENGSTDA---IPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSD 60

Query: 61  SAANEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120
           SAA+E  NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL
Sbjct: 61  SAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE E+ LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLI 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSG                              
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSG------------------------------ 240

Query: 241 QKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEM 300
                                                                    +EM
Sbjct: 241 ---------------------------------------------------------DEM 300

Query: 301 PFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360
           PFYAG DERMVELQGESLKVLKALE VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET
Sbjct: 301 PFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPASQDRQTET 360

Query: 361 WADKSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSS 420
           WADKSSLLTASQS+IS EY PSTKRESLFLDRE H DSHI SSGISLYGQDRVLP IRSS
Sbjct: 361 WADKSSLLTASQSIISAEYAPSTKRESLFLDREAHFDSHISSSGISLYGQDRVLPTIRSS 420

Query: 421 GVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 480
           GV RSG PIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV
Sbjct: 421 GVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITV 470

Query: 481 EIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYTSSSLS 540
           EIKGTSSQVQMAQQLIQEAV+ PKEPVTSSSYGRLDTTGLRSSYSQLAASGSS+TSSSLS
Sbjct: 481 EIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSFTSSSLS 470

Query: 541 SQSYGGYGSSGLGGYSTFRL 560
           SQSYGGYGSSGLGGY+TFRL
Sbjct: 541 SQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of Spg017112 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 414.5 bits (1064), Expect = 1.4e-115
Identity = 261/543 (48.07%), Postives = 331/543 (60.96%), Query Frame = 0


Query: 53  LSAPASDSAANEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 112
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 113 TRARIRVLDGAVGTPDRVVLISGKEEPEAALSPAMDAVIRVFKRVSGLSENEDE----AK 172
           TRARI+VLDG V TPDR+VLISGKEEPEA +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 173 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLM 232
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS                   
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILS------------------- 222

Query: 233 RKSNWDLCRLLIQKYRGVYLMWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLW 292
                                                                       
Sbjct: 223 ------------------------------------------------------------ 282

Query: 293 KEEPLYLHRNEMPFYAGVDERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSF 352
                     E PFYA  DER+V+LQGE+LK+LKALEA+VGHLR+FLVDH+V+PLFEK +
Sbjct: 283 --------EEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHTVVPLFEKQY 342

Query: 353 NTPASQDRQTETWAD-KSSLLTASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISL 412
               SQ RQ E  A+ KSSL T S +++  ++    +RE LFL+R++ +DS +  SG+S+
Sbjct: 343 LARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSRVDSRVQPSGVSI 402

Query: 413 YGQDRVLPAIRSSGVARSGAPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 472
           Y QD VL A  S G+AR  +  VTQV+QTMQIP SYAEDIIGV G NIA+IRR SGA +T
Sbjct: 403 YSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATIT 462

Query: 473 IQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSGPKEPVT-SSSYGRLDTTGL------ 532
           I+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KEPV+ S  Y R+D+  +      
Sbjct: 463 IKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQ 495

Query: 533 ---------------------RSSYSQLAASGSSYTSSSLSSQSYGG--YGSSGLGGYST 560
                                 ++YSQL   G S  + +L+ Q+YG     +S +GGYS+
Sbjct: 523 LSNRQEPLPSTYMGTEPVQYRPTAYSQL--GGPSTYTPTLTGQTYGSEYRPASDVGGYSS 495

[Close]

BLAST of Spg017112 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 244.6 bits (623), Expect = 1.9e-64
Identity = 179/500 (35.80%), Postives = 241/500 (48.20%), Query Frame = 0


Query: 70  GASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRV 129
           G  +K+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R 
Sbjct: 174 GGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERA 233

Query: 130 VLISGKEEPEAALSPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIG 189
           V++SGKEEPE++L P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIG
Sbjct: 234 VMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIG 293

Query: 190 KQGSLIKSIQESTGASVRVLSGGLELLHGLPIDQVLPLLMRKSNWDLCRLLIQKYRGVYL 249
           KQG  +K+IQE++   VRVL                                        
Sbjct: 294 KQGGTVKAIQEASACIVRVLGS-------------------------------------- 353

Query: 250 MWPSPQTGAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEMPFYAGVDE 309
                                                             ++P +A  D+
Sbjct: 354 -------------------------------------------------EDLPVFALQDD 413

Query: 310 RMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTPASQ-DRQTETWADKSSL 369
           R+VE+ GE   V +ALE +  HLRKFLVD S++P FE     P  Q D            
Sbjct: 414 RVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPP 473

Query: 370 LTASQSVISTEY--------PPSTKRESLFLDRETHLD--SHIPSSGISLYGQDRVLPAI 429
              + SV    Y         P  + +S +   E         P  GIS YG++  +   
Sbjct: 474 QGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPM--- 533

Query: 430 RSSGVARSGAP--IVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLP 489
               V  S AP  +  QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P
Sbjct: 534 ---NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVP 575

Query: 490 DEITVEIKGTSSQVQMAQQLIQEAVSGPKEPVTSSSYGRLDTTGLRSSYSQLAASGSSYT 549
            E+TVE+ GT SQVQ A QLIQ  ++    P  +           +  Y+  A  GS Y 
Sbjct: 594 GEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPAPAQPQ---TVAPEQQGYNPYATHGSVYA 575

Query: 550 SSSLSSQSYGGYGSSGLGGY 555
           ++  +    GGY +    GY
Sbjct: 654 AAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of Spg017112 vs. TAIR 10
Match: AT5G64390.3 (RNA-binding KH domain-containing protein )

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-17
Identity = 106/431 (24.59%), Postives = 179/431 (41.53%), Query Frame = 0


Query: 82  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEEPEAA 141
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E PE  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 142 LSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 201
            SPA  A++ +F R+  L+ N+  D    S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 202 TGASVRVLSGGLELLHGLPIDQVLPLL-----MRKSNWDLCRLLIQKYRGVYLMWPSPQT 261
           TGA++++L            DQV+ +      +R++ + +   L                
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSV------------ 630

Query: 262 GAHRVRLEMNYRVTFSSIALLLEIFGPRLCLLWKEEPLYLHRNEMPFYAGVDERMVELQG 321
                   M   +  SS AL  E F  R      + PL +  ++       +   +  + 
Sbjct: 631 ----FSNSMKNSLAKSSSALTTERFYDR----QSDNPLSIGSHQSVSNPATNSSSLHRRS 690

Query: 322 ESLKVLKALEAVVGHLRKFLVDHSVLP--LFEKSFNTPASQD-----RQTETWADKSSLL 381
           E    L    + V + R    D  + P   F   FN  A        R T   +D S  L
Sbjct: 691 ED-SFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHL 750

Query: 382 TASQSVISTEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPAIRSSGVARSG-- 441
           T + S +    PP+  R                S G+S      VL ++ +  V  SG  
Sbjct: 751 TEAPSRLWASPPPAAPR-----------GLSDASGGLSSARAGHVLGSLHARLVFSSGHK 810

Query: 442 APIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQE-SRGLPDEITVEIKGT 496
           + IVT  T  +++P +    + G  G N+  +R+ SGA + I E   G  D I V I GT
Sbjct: 811 SAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIV-ISGT 848

[Close]

BLAST of Spg017112 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 86.7 bits (213), Expect = 6.6e-17
Identity = 51/154 (33.12%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 82  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEEP--- 141
           D VFR + PV K+GS+IGR GD++K++  +TR++IR+ +   G  +RV+ I    +    
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 142 ----EAALSPAMDAVIRVFKRV---SGLSENEDEAKASFCSIRLLVASTQAINLIGKQGS 201
               E  LSPA DA+ R+  RV      SE+  E +    + +LLV S Q   ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQ-VTAKLLVPSDQIGCILGRGGQ 168

Query: 202 LIKSIQESTGASVRVLSGGLELLHGLPIDQVLPL 226
           ++++I+  TGA +R++      L  L  D+++ +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQI 201

[Close]

BLAST of Spg017112 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 86.7 bits (213), Expect = 6.6e-17
Identity = 51/154 (33.12%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 82  DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEEP--- 141
           D VFR + PV K+GS+IGR GD++K++  +TR++IR+ +   G  +RV+ I    +    
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 142 ----EAALSPAMDAVIRVFKRV---SGLSENEDEAKASFCSIRLLVASTQAINLIGKQGS 201
               E  LSPA DA+ R+  RV      SE+  E +    + +LLV S Q   ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQ-VTAKLLVPSDQIGCILGRGGQ 168

Query: 202 LIKSIQESTGASVRVLSGGLELLHGLPIDQVLPL 226
           ++++I+  TGA +R++      L  L  D+++ +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQI 201

The following BLAST results are available for this feature:

BLAST of Spg017112 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890982.1	3.0e-229	80.25	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
XP_023538336.1	1.3e-219	77.14	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo...	[more]
XP_022938096.1	4.1e-218	77.14	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata]	[more]
XP_022149911.1	6.9e-218	77.30	RNA-binding KH domain-containing protein PEPPER [Momordica charantia]	[more]
KAG7029848.1	3.4e-217	77.01	RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. a...	[more]

BLAST of Spg017112 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	2.0e-114	48.07	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	2.7e-63	35.80	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	6.1e-15	24.13	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
Q15366	9.7e-13	39.34	Poly(rC)-binding protein 2 OS=Homo sapiens OX=9606 GN=PCBP2 PE=1 SV=1	[more]
Q61990	9.7e-13	39.34	Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1	[more]

BLAST of Spg017112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC72	2.0e-218	77.14	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1D9V1	3.4e-218	77.30	RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 G...	[more]
A0A5D3BVI2	3.7e-217	77.50	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1K7W7	1.1e-216	76.83	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0LMH4	3.1e-216	77.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]

BLAST of Spg017112 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	1.4e-115	48.07	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	1.9e-64	35.80	RNA-binding KH domain-containing protein	[more]
AT5G64390.3	1.7e-17	24.59	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	6.6e-17	33.12	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	6.6e-17	33.12	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 430..500 e-value: 6.9E-11 score: 52.2 coord: 169..331 e-value: 0.11 score: 21.6 coord: 81..154 e-value: 1.3E-9 score: 48.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 420..501 e-value: 4.6E-14 score: 53.8
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 427..501
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 167..337
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 76..137
None	No IPR available	GENE3D	3.30.310.210		coord: 82..213 e-value: 3.3E-26 score: 93.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..67
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 294..545
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 294..545 coord: 71..209
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 71..209
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 82..149 score: 14.319535
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 431..495 score: 14.361462
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 170..206 score: 10.08497
None	No IPR available	CDD	cd00105	KH-I	coord: 433..496 e-value: 4.48157E-12 score: 59.4959
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 84..153 e-value: 7.68992E-20 score: 81.3687
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 173..207 e-value: 1.3E-5 score: 24.9 coord: 433..497 e-value: 1.9E-11 score: 43.6 coord: 85..138 e-value: 3.8E-11 score: 42.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017112.1	Spg017112.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0048579	negative regulation of long-day photoperiodism, flowering
biological_process	GO:0048577	negative regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding