Spg017095 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017095
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ribosomal RNA processing protein 1 homolog
Location	scaffold4: 40134143 .. 40137762 (+)
RNA-Seq Expression	Spg017095
Synteny	Spg017095

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGTAGTTGAAGGGGATCAAGGTTTCACTTCACTGATCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAAACCCTCCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAACTCTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGATAAGCTTCCTGTGCAGTCCGAGCTTATTAATCGCCTCGCTTCTCTGCTCCTCCATCTCGACCTGCCGCTAGCCGTTCAATACTTCTCTGTTTTTCTCCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCTCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGATTTATGCACCAGTTTCTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAATTGTGTCGTCGCTCGGTTCAAGTTTTGGAAGAAAGGGTGTTTTTCACCGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCCGAAGGAAGTTATTGATATCCTGTTCCAGCCATTCATTTTGTCCATGGCCAAACTGCCAGATAAAGTGTTGTTGGGAAAGATTAAGTCTAATCTTTTTGATGTGTTACTTAAAATGGGGAAGCAATTACTTGAGCGACGAAAATGTGGAGAGGATGTGGATTCTGGTGATGATATGGTTGTGTATGGGGCAATTTCATTGACAAATCTATTCTCAACTACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCACGAAGAGTATCAGAAGTTGGAGAAAGATTTTATCTCATCGGGGATTGAGATTTCGATCCCAGATCTTCAAGAGCAAGATGAGGATGAAGTGCCTACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGCTCCTTCAGAAATTTCCATGGTTGATGTTGATGAATCTACTGATAAGGCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGTAAGAAGACTAAGAAGGCTAAGAAGGCGAAGAAGACCATGAACGGTACTTCTGATCTTGCTTGTGAAAATACTCCTATGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATAAGTGATGAAAATATGATAACCTTTGATGAATCTGTGATATCGAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTGTGAAGACAATGTTGTGAGCCCTGTAATATCAGCCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCGGCAGACACATGATGTAGTAGTTCCCAGCCAAGTTGACGCTGAAAGAAATATGGCTGAAAAAAGTGGAGAGAAGAGTGTAAAGAAGGTTAGGTTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCACTGTTACTCCGAGAGGAAGTGCACTTAAGAAAGGGATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAACTAAAAGGACAAAAAGGAGAGCTGTCGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTGTGAAGAAATTAAAATCTAAGAGTACTTAGAAGCTTTTTGTCATAGGGTATGAAGTTGCAGAGGTCCAAATCTTACAGTTTTTTCATCATTTAATGATTTTCTTAATTACTTCGTTTTGTTTGGGCTTTGTTGTCATATTAACTTTCATGAACTCAACCATTGAAAAAGAATGAAGATTCTGATGCATTGAGTTGAGAACTTGAAATTGTAATGCCCCACTGAATTCTAGCTTAAATGATCAATTTTTCTTTTCCCTTTTCATTATAAAGTTTTGCACATGGAATGAGTGAGAACTAGGGTAGAATTTCAGCACGGAGAGAGTGTAAACGGTTGCTGTTTTTTATTTTTCCTTTTATCAAGCACTTTGTGGTTTAGTATGCAAGGTTCTGTCTTTGGTAAAAGATGGTCCACACAGCATGAATGCCAAATAGTGGTAATAAGTTGGCTTCTGAGATGTGAGATGGAGGATTGGAAGTGACTAAACAACGATGGATATACTCAGTTTCTAATTATACCTAGCTGTCTTTGGCACAAGTTACTCCTTGCAGTATACCATAAAATTTTGTCCTAGCTAACTAGTAACTATTGAGATGATTTTTAGGTGAACGCATTTCTGTTTTTCTGTTAAAGTAGTATTCATCTGGACGAATGACTGGAAATGCCTATAGTGTTAGAAGATTGGTTATTGCATCTGCATTTTCTCATTTGCTTGTGTGTGCGCTCTTGGTTTTATCTTCATACTGTACAGAATAAACAGTATCATGATCTGTGCAATGGGAGCATTGTTTATTGCAGTATATTAGGGGTGTGAATTGGTTTGATTCAGTTCAGTTCTTAGACGAATCAGCCGAACGGGATTGGTTTGACTGAACCAAATCGTCAAACAGAGGGAGAATTGGGCTCAACTTAACTGGTTTGGTTCAGTTATGGTTTGGCCTTCAGTTCGAGGGTAGTTTTAAATGGTTTTCTCCTCTTATTCTGTGTTCTTTGACTAGGATTTGATACATTTGCCTTAGAAGAGGGCCAAGCCGCACCTCTTTTCTTCGAGGTTGTTTCAATTCTTTAGGAATGAAGCTTGTTTTGGCCTCCAATATTTCCTGTTTTCATTCCATGTCTCTGTTCTTTAGATAGGATTATGTTATGCCTACCTATTAAATTTGTGTCCTTGTGCGTCACAACAACTATCATTTTTTTTTTTTTTTTGTTAAAAATTGACATTGGACTAATGTATCAGTTGGGAAAAACAAAGATTGATGATGAAACCATTCTGAAAGTTGGGAAAATGCATGATAAAATTGACTGATCTTACCAAAATTTACAGAATTAATTCGAAATGAATCGATGGATTCTTTTTCTACTTTGTTTTAGAAAATCTAGCTCACTGACTGCTCAAACCAATTGAACCCATTTGATTTGATTTGGTTTGGTGATTTTGGTAGCACTTCTATTCTCAAACTAATAGTCCAAGCTAATATGAATTACAAATGGTTAGGTTACAAAATTAGTATACTTTATTTTTTTGAACTTTAATGTTTTTTTTTTTTTTTCAATAGGAAATGAACACTTCACTAAAACTAAATAAAACAATCCGTTGTGGGACAGGAACCCCCCACTATGATGAACAATATTACCAATATCCTTCCTATTTAAGGACATCAACCAACAGGAAAATAATTGGATCAGCACTTAGAGGAGTTTGATTCACAGGCCTTATGGGCCATCTTATTGTGGCCTCTGGGAACGTGAAGAATGGATTCCACATTTAGAGTATGCAACAGACTTTTAGCTTCATTTAAGAAAAGTGATGTTTCCGTAAAGTCATCCTCCCGCCCCTAAAGAAGACGAGCGATCTGAAGGGAATCCAACTCTACACGGGCCGTTGGAGAAGTCGCCGGAATCGTCTTCAGCCCTTCAATCAAAGCTGTCGCTTCCAGCCAGCGGACCTTCCACTGACGATTGA

mRNA sequence

ATGGAGGAGGTAGTTGAAGGGGATCAAGGTTTCACTTCACTGATCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAAACCCTCCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAACTCTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGATAAGCTTCCTGTGCAGTCCGAGCTTATTAATCGCCTCGCTTCTCTGCTCCTCCATCTCGACCTGCCGCTAGCCGTTCAATACTTCTCTGTTTTTCTCCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCTCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGATTTATGCACCAGTTTCTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAATTGTGTCGTCGCTCGGTTCAAGTTTTGGAAGAAAGGGTGTTTTTCACCGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCCGAAGGAAGTTATTGATATCCTGTTCCAGCCATTCATTTTGTCCATGGCCAAACTGCCAGATAAAGTGTTGTTGGGAAAGATTAAGTCTAATCTTTTTGATGTGTTACTTAAAATGGGGAAGCAATTACTTGAGCGACGAAAATGTGGAGAGGATGTGGATTCTGGTGATGATATGGTTGTGTATGGGGCAATTTCATTGACAAATCTATTCTCAACTACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCACGAAGAGTATCAGAAGTTGGAGAAAGATTTTATCTCATCGGGGATTGAGATTTCGATCCCAGATCTTCAAGAGCAAGATGAGGATGAAGTGCCTACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGCTCCTTCAGAAATTTCCATGGTTGATGTTGATGAATCTACTGATAAGGCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGTAAGAAGACTAAGAAGGCTAAGAAGGCGAAGAAGACCATGAACGGTACTTCTGATCTTGCTTGTGAAAATACTCCTATGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATAAGTGATGAAAATATGATAACCTTTGATGAATCTGTGATATCGAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTGTGAAGACAATGTTGTGAGCCCTGTAATATCAGCCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCGGCAGACACATGATGTAGTAGTTCCCAGCCAAGTTGACGCTGAAAGAAATATGGCTGAAAAAAGTGGAGAGAAGAGTGTAAAGAAGGTTAGGTTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCACTGTTACTCCGAGAGGAAGTGCACTTAAGAAAGGGATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAACTAAAAGGACAAAAAGGAGAGCTGTCGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTATATTAGGGGTGTGAATTGGTTTGATTCAGTTCAGTTCTTAGACGAATCAGCCGAACGGGATTGGCCTTATGGGCCATCTTATTGTGGCCTCTGGGAACGTGAAGAATGGATTCCACATTTAGATCATCCTCCCGCCCCTAAAGAAGACGAGCGATCTGAAGGGAATCCAACTCTACACGGGCCGTTGGAGAAGTCGCCGGAATCGTCTTCAGCCCTTCAATCAAAGCTGTCGCTTCCAGCCAGCGGACCTTCCACTGACGATTGA

Coding sequence (CDS)

ATGGAGGAGGTAGTTGAAGGGGATCAAGGTTTCACTTCACTGATCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAAACCCTCCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTCTCCGATGGCGATATGAAGAAACTCTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCCGATAAGCTTCCTGTGCAGTCCGAGCTTATTAATCGCCTCGCTTCTCTGCTCCTCCATCTCGACCTGCCGCTAGCCGTTCAATACTTCTCTGTTTTTCTCCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCTCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGATTTATGCACCAGTTTCTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAATTGTGTCGTCGCTCGGTTCAAGTTTTGGAAGAAAGGGTGTTTTTCACCGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCCGAAGGAAGTTATTGATATCCTGTTCCAGCCATTCATTTTGTCCATGGCCAAACTGCCAGATAAAGTGTTGTTGGGAAAGATTAAGTCTAATCTTTTTGATGTGTTACTTAAAATGGGGAAGCAATTACTTGAGCGACGAAAATGTGGAGAGGATGTGGATTCTGGTGATGATATGGTTGTGTATGGGGCAATTTCATTGACAAATCTATTCTCAACTACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTACTGTTTGCCATGCACGAAGAGTATCAGAAGTTGGAGAAAGATTTTATCTCATCGGGGATTGAGATTTCGATCCCAGATCTTCAAGAGCAAGATGAGGATGAAGTGCCTACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGCTCCTTCAGAAATTTCCATGGTTGATGTTGATGAATCTACTGATAAGGCACTTAAAAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGTAAGAAGACTAAGAAGGCTAAGAAGGCGAAGAAGACCATGAACGGTACTTCTGATCTTGCTTGTGAAAATACTCCTATGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATAAGTGATGAAAATATGATAACCTTTGATGAATCTGTGATATCGAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTGTGAAGACAATGTTGTGAGCCCTGTAATATCAGCCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGATGGGCGGCAGACACATGATGTAGTAGTTCCCAGCCAAGTTGACGCTGAAAGAAATATGGCTGAAAAAAGTGGAGAGAAGAGTGTAAAGAAGGTTAGGTTTTCCATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCACTGTTACTCCGAGAGGAAGTGCACTTAAGAAAGGGATACCTCCAGGTCCTATCTTGGAATTCCCTGCCACAACTAAAAGGACAAAAAGGAGAGCTGTCGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTATATTAGGGGTGTGAATTGGTTTGATTCAGTTCAGTTCTTAGACGAATCAGCCGAACGGGATTGGCCTTATGGGCCATCTTATTGTGGCCTCTGGGAACGTGAAGAATGGATTCCACATTTAGATCATCCTCCCGCCCCTAAAGAAGACGAGCGATCTGAAGGGAATCCAACTCTACACGGGCCGTTGGAGAAGTCGCCGGAATCGTCTTCAGCCCTTCAATCAAAGCTGTCGCTTCCAGCCAGCGGACCTTCCACTGACGATTGA

Protein sequence

MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPLPKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMVVYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQEQDEDEVPTLVPVSSEEEAPSEISMVDVDESTDKALKKQKKNKKATDGSGKKTKKAKKAKKTMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQFERVAAEADCEDNVVSPVISANGSVKKRKRAKNVDGRQTHDVVVPSQVDAERNMAEKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVRSLPVKRYIRGVNWFDSVQFLDESAERDWPYGPSYCGLWEREEWIPHLDHPPAPKEDERSEGNPTLHGPLEKSPESSSALQSKLSLPASGPSTDD

Homology

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BLAST of Spg017095 vs. NCBI nr
Match: XP_038875379.1 (ribosomal RNA processing protein 1 homolog [Benincasa hispida])

HSP 1 Score: 950.3 bits (2455), Expect = 8.7e-273
Identity = 496/557 (89.05%), Postives = 523/557 (93.90%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ FTSL+KLLASSNKATRDKTLRVIIKTWLPTQ SLSDGDMKKLWKGLFYC+
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQKSLSDGDMKKLWKGLFYCI 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK+PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF ALLKKHSWDLELCR SVQVLEERVFF +DKFHGNGVNYQIASVFLEEL+PFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCSVQVLEERVFFADDKFHGNGVNYQIASVFLEELKPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEVID+LF+PF+ SM KLPDKVLLGKIKSNLFDV+LKMGKQLL+RRKCG+DVDSGDD+V
Sbjct: 181 QKEVIDVLFKPFLCSMVKLPDKVLLGKIKSNLFDVILKMGKQLLDRRKCGDDVDSGDDIV 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           V+G IS TNLFSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKDFISSG+EIS+P LQE
Sbjct: 241 VFGTISFTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFISSGVEISLPGLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD---ESTDKALKKQKKNKKATDGSG-KKTKKAK 360
           QD DEVPTLVPVSSEEEAPSEISMVDVD   +STDKALKKQKK+KKATD SG KK KKAK
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSEISMVDVDVNADSTDKALKKQKKSKKATDDSGKKKAKKAK 360

Query: 361 KAKKTMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQFE 420
           KAK+T NG SDL  ENTP+NKDNENIVVANGENSNNEQISD NMITFDE+VISNLQMQFE
Sbjct: 361 KAKETTNGISDLVSENTPVNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADCEDNVVSPVISANGSVKKRKRAKNVDGRQTHDVVVPSQVDAERNMAEKSGEKS 480
           R AAEAD ED+  SPV+SANGSVKKRKRAKNVDG Q H+VV+ SQVDAE N A KS EKS
Sbjct: 421 RAAAEADFEDSFASPVMSANGSVKKRKRAKNVDGSQKHEVVLSSQVDAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKR 554
           AVAMRAKKGVRSLPVKR
Sbjct: 541 AVAMRAKKGVRSLPVKR 557

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BLAST of Spg017095 vs. NCBI nr
Match: XP_022149903.1 (ribosomal RNA processing protein 1 homolog [Momordica charantia])

HSP 1 Score: 948.3 bits (2450), Expect = 3.3e-272
Identity = 497/559 (88.91%), Postives = 524/559 (93.74%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ FTSLIK LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF AL+KKHSWDLELCRR +QVLEERVFFT+DKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEV+D+LF+PF+LSMAKLPDKVL+GKIKSNLFDVLLKMGKQLLE RKCG+DVDSGDD+V
Sbjct: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           VYG +SLTNLFS+TFYELGSSP+CCQGNRKVLFA+HEEYQKLEKDFISSGIEISIPDL E
Sbjct: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD---ESTDKALKKQKKNKKATDGSG--KKTKKA 360
           QD DEVPTLVPVSSEEEAPS+ISMVDVD   ESTDKALKKQKKNKKATD SG  KK KKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360

Query: 361 KKAKKTMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQF 420
           KKAKKTMNG SDL  ENTPMNKDNENI VANGENSNNEQISD NMI FDESVISNLQMQF
Sbjct: 361 KKAKKTMNGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420

Query: 421 ERVAAEADCEDNVVSPVISANGSVKKRKRAKNVDG-RQTHDVVVPSQVDAERNMAEKSGE 480
           ERVAAEAD ED+VV PV+SANGSVKKRKRAKN DG +QTH +V+PSQVDAE N A KSGE
Sbjct: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540

Query: 541 RRAVAMRAKKGVRSLPVKR 554
           RRAVAMR+KKGVRSLPVKR
Sbjct: 541 RRAVAMRSKKGVRSLPVKR 558

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BLAST of Spg017095 vs. NCBI nr
Match: XP_008450828.1 (PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa] >TYK14953.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 936.8 bits (2420), Expect = 9.9e-269
Identity = 491/557 (88.15%), Postives = 515/557 (92.46%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK+PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF ALLKKHSWDLELCR  VQVLEERVFFT+DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEV+D+LF+PF+LSMAKLPDKVL GKIKSNLFDV+LKMGKQLLE RK G+D+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           VYG ISLTN FSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD---ESTDKALKKQKKNKKATDGSG-KKTKKAK 360
           QD DEVPTLVP+ SEEEAPSEISMVDVD   ESTDKALKKQK++KKATDGSG KK KKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQFE 420
           KAKKT NG SDL  EN+P NKDNENIVVANGENSNNEQISD NMITFDE+VISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADCEDNVVSPVISANGSVKKRKRAKNVDGRQTHDVVVPSQVDAERNMAEKSGEKS 480
           +VAAEAD  D++VSPVIS NGSVKKRKRAKNVD  Q HDV +PS+  AE N A KS EKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKR 554
           AV+MR KKGVRSLPVKR
Sbjct: 541 AVSMRTKKGVRSLPVKR 557

[Close]

BLAST of Spg017095 vs. NCBI nr
Match: XP_023546269.1 (ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546270.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546272.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 929.9 bits (2402), Expect = 1.2e-266
Identity = 498/586 (84.98%), Postives = 515/586 (87.88%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF ALLKKHSWDLELCRRSVQVLEERVFFT+DKF G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFPGSGVNYQIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEVIDILF+PFI SMAKL DKVLLGKIKSNLFDV+LKMGKQLLERRKCGEDVDSGDDMV
Sbjct: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           V G+ISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKD ISSGIEIS PDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD-------------------------------- 360
           QD DEVPTLVPVSSE EAPSEIS VDVD                                
Sbjct: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKAHKKKKKNKKATPSEISMLDVDLT 360

Query: 361 -ESTDKALKKQKKNKKATDGSGKKTKKAKKAKKTMNGTSDLACENTPMNKDNENIVVANG 420
            ESTDK LKKQKKNKKATDGSGK     KK KKT NG+SDL  ENT +NKDNENIV +NG
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGK-----KKTKKTTNGSSDLVSENTTVNKDNENIVASNG 420

Query: 421 ENSNNEQISDENMITFDESVISNLQMQFERVAAEADCEDNVVSPVISANGSVKKRKRAKN 480
           ENSNNEQISD NMI  DESVISNLQ+QFERVA+EAD  DN++SPVIS NGSVKKRKRAKN
Sbjct: 421 ENSNNEQISDGNMIALDESVISNLQIQFERVASEADFGDNLLSPVISTNGSVKKRKRAKN 480

Query: 481 VDGRQTHDVVVPSQVDAERNMAEKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTV 540
           VDG Q HDVV+PS+VDAE N A KSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+V
Sbjct: 481 VDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSV 540

Query: 541 TPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVRSLPVKR 554
           TPRGSALKKGIPPGPILEFPAT KRTKRRAVAMRAKKGVRSLPVKR
Sbjct: 541 TPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKR 581

[Close]

BLAST of Spg017095 vs. NCBI nr
Match: XP_022929687.1 (ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ribosomal RNA processing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 927.9 bits (2397), Expect = 4.6e-266
Identity = 495/586 (84.47%), Postives = 514/586 (87.71%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF ALLKKHSWDLELCRRSVQVLEERVFFT+DKF+G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEV+DILF+PFI SMAKL DKVLLGKIKSNLFDV+LKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           V G+ISLTNLFSTTFY+LGSSPDCCQGNRKVLFAMHEEYQKLEKD ISSGIEIS PDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD-------------------------------- 360
           QD DEVPTLVPVSSEEE PSEIS VDVD                                
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 -ESTDKALKKQKKNKKATDGSGKKTKKAKKAKKTMNGTSDLACENTPMNKDNENIVVANG 420
            ESTDK LKKQKKNKKATDGSGK     KK KKT NG+SDL  ENT +NKDNENIV +NG
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGK-----KKTKKTTNGSSDLVSENTTVNKDNENIVASNG 420

Query: 421 ENSNNEQISDENMITFDESVISNLQMQFERVAAEADCEDNVVSPVISANGSVKKRKRAKN 480
           ENSNNEQI D NMI  DESVISNLQ+QFE+VA+EAD  DNVVSPVIS NGSVKKRKRAKN
Sbjct: 421 ENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKN 480

Query: 481 VDGRQTHDVVVPSQVDAERNMAEKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTV 540
           VDG Q HDVV+PS+VDAE N A KSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+V
Sbjct: 481 VDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSV 540

Query: 541 TPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVRSLPVKR 554
           TPRGSALKKGIPPGPILEFPAT KRTKRRAVAMRAKKGVRSLPVKR
Sbjct: 541 TPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKR 581

[Close]

BLAST of Spg017095 vs. ExPASy Swiss-Prot
Match: Q91YK2 (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-23
Identity = 78/228 (34.21%), Postives = 120/228 (52.63%), Query Frame = 0


Query: 18  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKLPVQSEL 77
           LASS K  RD+ +R  ++ +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRK-LRQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLPLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFMHQFLALLK 137
            N + S L+H+   L  QY  +  F  TM REW GID L+LDK+Y+LIR  + Q   +LK
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 138 KHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPF--LPLPKEVIDIL 197
           +++W+       + +L + +   E +   NGV   +  V+LEEL       L  +    L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195

Query: 198 FQPFILSMAKLPDKVLLGKIKSNLFDVLLKMG----KQLLERRKCGED 233
             PF    AK  D  L+  +   +F+V++       ++ +E RK  ED
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

[Close]

BLAST of Spg017095 vs. ExPASy Swiss-Prot
Match: Q14684 (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)

HSP 1 Score: 103.6 bits (257), Expect = 8.5e-21
Identity = 72/210 (34.29%), Postives = 111/210 (52.86%), Query Frame = 0


Query: 18  LASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQSEL 77
           LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGIRDRAVKKLRQYISVKTQRET-GGFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLPLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFLALLKK 137
            N +A L+  ++   A   F   F  TM REW GID LRLDK+Y+LIR  + Q   +LK+
Sbjct: 76  ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135

Query: 138 HSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPLPKEVI---DIL 197
           + W+    +  + VL + V   E +   NGV +    ++L+EL       KE++   ++ 
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSKV--GGKELLADQNLK 195

Query: 198 F-QPFILSMAKLPDKVLLGKIKSNLFDVLL 218
           F  PF    AK  D  L+  I   +F+ ++
Sbjct: 196 FIDPFCKIAAKTKDHTLVQTIARGVFEAIV 221

[Close]

BLAST of Spg017095 vs. ExPASy Swiss-Prot
Match: P56183 (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-20
Identity = 72/233 (30.90%), Postives = 113/233 (48.50%), Query Frame = 0


Query: 14  LIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKLPV 73
           L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLASLLLHL--DLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFL 133
           Q E + R  + L+H         Q+   F  TM REW GID LRLDKFY+L+R  + + L
Sbjct: 73  QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132

Query: 134 ALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPF--LPLPKEV 193
             +K   WD     + +++L   +    D    +GV      +FLEEL       L  + 
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEI-LNPDSQAPSGVKSHFLEIFLEELAKVGAAELTADQ 192

Query: 194 IDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGD 238
                 PF    A+  D  +L KI  ++F  +++     +E      D  SG+
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIEDIMNELDTQSGE 242

[Close]

BLAST of Spg017095 vs. ExPASy Swiss-Prot
Match: P56182 (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-20
Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 0


Query: 14  LIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKLPV 73
           L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLASLLLHLDLPLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFL 133
             E + R  S L+H       Q  +   F  TM REW GID LRLDKFY+L+R  +++ L
Sbjct: 73  LQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESL 132

Query: 134 ALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPF--LPLPKEV 193
            +LK   W+       +++L   +     +   NGV      +FLEEL       L  + 
Sbjct: 133 KVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTKVGAEELTADQ 192

Query: 194 IDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLE 226
                 PF    A+  D ++L  I   +F+ +++     +E
Sbjct: 193 NLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE 230

[Close]

BLAST of Spg017095 vs. ExPASy Swiss-Prot
Match: Q9Y7M6 (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-19
Identity = 63/168 (37.50%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 15  IKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKLPVQSELIN 74
           IK LA++++ TRDK L   ++ +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALE-SLQRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 75  RLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFMHQFLALLKKHSW 134
            LA+L+  + +   + + S F  TM REW GID LR DKFYLL+RRF       ++  S 
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 135 DL---ELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLP 180
                ++     Q+  +  F TE+    NG+ + +A ++ EELR   P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYP 174

[Close]

BLAST of Spg017095 vs. ExPASy TrEMBL
Match: A0A6J1D805 (ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111018204 PE=4 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.6e-272
Identity = 497/559 (88.91%), Postives = 524/559 (93.74%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ FTSLIK LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF AL+KKHSWDLELCRR +QVLEERVFFT+DKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEV+D+LF+PF+LSMAKLPDKVL+GKIKSNLFDVLLKMGKQLLE RKCG+DVDSGDD+V
Sbjct: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           VYG +SLTNLFS+TFYELGSSP+CCQGNRKVLFA+HEEYQKLEKDFISSGIEISIPDL E
Sbjct: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD---ESTDKALKKQKKNKKATDGSG--KKTKKA 360
           QD DEVPTLVPVSSEEEAPS+ISMVDVD   ESTDKALKKQKKNKKATD SG  KK KKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360

Query: 361 KKAKKTMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQF 420
           KKAKKTMNG SDL  ENTPMNKDNENI VANGENSNNEQISD NMI FDESVISNLQMQF
Sbjct: 361 KKAKKTMNGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420

Query: 421 ERVAAEADCEDNVVSPVISANGSVKKRKRAKNVDG-RQTHDVVVPSQVDAERNMAEKSGE 480
           ERVAAEAD ED+VV PV+SANGSVKKRKRAKN DG +QTH +V+PSQVDAE N A KSGE
Sbjct: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540

Query: 541 RRAVAMRAKKGVRSLPVKR 554
           RRAVAMR+KKGVRSLPVKR
Sbjct: 541 RRAVAMRSKKGVRSLPVKR 558

[Close]

BLAST of Spg017095 vs. ExPASy TrEMBL
Match: A0A5A7U008 (Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00010 PE=4 SV=1)

HSP 1 Score: 936.8 bits (2420), Expect = 4.8e-269
Identity = 491/557 (88.15%), Postives = 515/557 (92.46%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK+PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF ALLKKHSWDLELCR  VQVLEERVFFT+DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEV+D+LF+PF+LSMAKLPDKVL GKIKSNLFDV+LKMGKQLLE RK G+D+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           VYG ISLTN FSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD---ESTDKALKKQKKNKKATDGSG-KKTKKAK 360
           QD DEVPTLVP+ SEEEAPSEISMVDVD   ESTDKALKKQK++KKATDGSG KK KKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQFE 420
           KAKKT NG SDL  EN+P NKDNENIVVANGENSNNEQISD NMITFDE+VISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADCEDNVVSPVISANGSVKKRKRAKNVDGRQTHDVVVPSQVDAERNMAEKSGEKS 480
           +VAAEAD  D++VSPVIS NGSVKKRKRAKNVD  Q HDV +PS+  AE N A KS EKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKR 554
           AV+MR KKGVRSLPVKR
Sbjct: 541 AVSMRTKKGVRSLPVKR 557

[Close]

BLAST of Spg017095 vs. ExPASy TrEMBL
Match: A0A1S3BR64 (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)

HSP 1 Score: 936.8 bits (2420), Expect = 4.8e-269
Identity = 491/557 (88.15%), Postives = 515/557 (92.46%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK+PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF ALLKKHSWDLELCR  VQVLEERVFFT+DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEV+D+LF+PF+LSMAKLPDKVL GKIKSNLFDV+LKMGKQLLE RK G+D+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           VYG ISLTN FSTTFYELGSSPDCCQGNRKVLFAMHEE+QKLEKDF SSGIEIS PDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD---ESTDKALKKQKKNKKATDGSG-KKTKKAK 360
           QD DEVPTLVP+ SEEEAPSEISMVDVD   ESTDKALKKQK++KKATDGSG KK KKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQFE 420
           KAKKT NG SDL  EN+P NKDNENIVVANGENSNNEQISD NMITFDE+VISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADCEDNVVSPVISANGSVKKRKRAKNVDGRQTHDVVVPSQVDAERNMAEKSGEKS 480
           +VAAEAD  D++VSPVIS NGSVKKRKRAKNVD  Q HDV +PS+  AE N A KS EKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKR 554
           AV+MR KKGVRSLPVKR
Sbjct: 541 AVSMRTKKGVRSLPVKR 557

[Close]

BLAST of Spg017095 vs. ExPASy TrEMBL
Match: A0A6J1ENE5 (ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436194 PE=4 SV=1)

HSP 1 Score: 927.9 bits (2397), Expect = 2.2e-266
Identity = 495/586 (84.47%), Postives = 514/586 (87.71%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF ALLKKHSWDLELCRRSVQVLEERVFFT+DKF+G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            KEV+DILF+PFI SMAKL DKVLLGKIKSNLFDV+LKMGKQLLERRKCGEDVDS DDMV
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           V G+ISLTNLFSTTFY+LGSSPDCCQGNRKVLFAMHEEYQKLEKD ISSGIEIS PDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD-------------------------------- 360
           QD DEVPTLVPVSSEEE PSEIS VDVD                                
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 -ESTDKALKKQKKNKKATDGSGKKTKKAKKAKKTMNGTSDLACENTPMNKDNENIVVANG 420
            ESTDK LKKQKKNKKATDGSGK     KK KKT NG+SDL  ENT +NKDNENIV +NG
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGK-----KKTKKTTNGSSDLVSENTTVNKDNENIVASNG 420

Query: 421 ENSNNEQISDENMITFDESVISNLQMQFERVAAEADCEDNVVSPVISANGSVKKRKRAKN 480
           ENSNNEQI D NMI  DESVISNLQ+QFE+VA+EAD  DNVVSPVIS NGSVKKRKRAKN
Sbjct: 421 ENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAKN 480

Query: 481 VDGRQTHDVVVPSQVDAERNMAEKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTV 540
           VDG Q HDVV+PS+VDAE N A KSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+V
Sbjct: 481 VDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSV 540

Query: 541 TPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVRSLPVKR 554
           TPRGSALKKGIPPGPILEFPAT KRTKRRAVAMRAKKGVRSLPVKR
Sbjct: 541 TPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKR 581

[Close]

BLAST of Spg017095 vs. ExPASy TrEMBL
Match: A0A6J1K5Q1 (ribosomal RNA processing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491909 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 4.2e-265
Identity = 493/586 (84.13%), Postives = 513/586 (87.54%), Query Frame = 0


Query: 1   MEEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SL+KLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FMHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPL 180
           F+HQF A LKKHSWDLELCRRSVQVLEERVFFT+DKFHG+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFAFLKKHSWDLELCRRSVQVLEERVFFTDDKFHGSGVNYQIASVFLEELRPFLPL 180

Query: 181 PKEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGEDVDSGDDMV 240
            K+VIDILF+PFI SMAKL DKVLLGKIKSNLFDV+LKMGKQLLERRKCGEDVDSGDDMV
Sbjct: 181 QKDVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 300
           V G+ISLTNLFSTTFYELGSSPDCCQGNRKVLF+MHEEYQKLEKD ISSGIEIS PDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFSMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDEDEVPTLVPVSSEEEAPSEISMVDVD-------------------------------- 360
           QD +EVPTLVPVSSE EAPSEIS+VDVD                                
Sbjct: 301 QDVNEVPTLVPVSSEGEAPSEISVVDVDITAESTDKAHKKKKKNKKATPSEISMLDVDLT 360

Query: 361 -ESTDKALKKQKKNKKATDGSGKKTKKAKKAKKTMNGTSDLACENTPMNKDNENIVVANG 420
            ESTDK LKKQKKNKKATDGSGK     KK KKT NG+SDL  ENT +NKDNENIV +NG
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGK-----KKTKKTTNGSSDLVSENTTVNKDNENIVASNG 420

Query: 421 ENSNNEQISDENMITFDESVISNLQMQFERVAAEADCEDNVVSPVISANGSVKKRKRAKN 480
           ENSNNEQISD NMI  DESVISNLQMQFERVA+EA+   NVVSPV+S NGSVKKRKRAKN
Sbjct: 421 ENSNNEQISDGNMIALDESVISNLQMQFERVASEAEFGVNVVSPVVSTNGSVKKRKRAKN 480

Query: 481 VDGRQTHDVVVPSQVDAERNMAEKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTV 540
           VDG Q HDVV+PS+VDAE N A KSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+V
Sbjct: 481 VDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSV 540

Query: 541 TPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVRSLPVKR 554
           TPRGSALKKGIPPGPILEFPAT KR KRRAV MRAKKGVRSLPVKR
Sbjct: 541 TPRGSALKKGIPPGPILEFPATAKRAKRRAVVMRAKKGVRSLPVKR 581

[Close]

BLAST of Spg017095 vs. TAIR 10
Match: AT5G20600.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )

HSP 1 Score: 459.5 bits (1181), Expect = 4.3e-129
Identity = 264/554 (47.65%), Postives = 360/554 (64.98%), Query Frame = 0


Query: 2   EEVVEGDQGFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 61
           E+ +  ++   SLIK LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVW
Sbjct: 11  EQALPIEEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVW 70

Query: 62  HADKLPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRF 121
           HADK   QSELI+RL+S L  L LPL++ YF+VFL TMRREW+ ID LRLDKFYLLIRRF
Sbjct: 71  HADKSLYQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRF 130

Query: 122 MHQFLALLKKHSWDLELCRRSVQVLEERVFFTEDKFHGNGVNYQIASVFLEELRPFLPLP 181
           +H F +L+  +SWDLE  RR + +L +     +DKF GNGVNY I S F+EELRPFLPL 
Sbjct: 131 LHGFFSLIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLR 190

Query: 182 KEVIDILFQPFILSMAKLPDKVLLGKIKSNLFDVLLKMGKQLLERRKCGED-VDSGDDMV 241
           KEV+++LF PF+  M  + DK+L+GKIKSNLFD LLKMGK+LL  ++ G+D V   DD+V
Sbjct: 191 KEVLELLFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVV 250

Query: 242 VYGAISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDFISSGIEISIPDLQE 301
           V G+I+L+  F+  FYELGSSP+C QGNRK++FA+H+E+ +LEKD  SS IE+SI +   
Sbjct: 251 VLGSIALSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASR 310

Query: 302 QDEDEVPTLVPVSSEEEAPSEISMVDVDESTDKALKKQKKNKKATDGSGKKTKKAKKAKK 361
              DEVP  VPVS               ES    + K K  K   +GS  K K  KK   
Sbjct: 311 PGNDEVPESVPVS---------------ESNTNVVSKSK--KIVANGSSSKKKGLKK--- 370

Query: 362 TMNGTSDLACENTPMNKDNENIVVANGENSNNEQISDENMITFDESVISNLQMQFERVAA 421
                    C  T  +   +  V+ +  +  N+   DE   +FDE++IS+L+ +FE++A+
Sbjct: 371 ---------CSKTKKDSVKKGAVMDSVVDLGNK---DE---SFDETMISDLRQEFEKIAS 430

Query: 422 EADCEDNVVSPV--ISANGSVKKRKRAKNVDGRQTHDVVVPSQVDAERNMAEKSGEKSVK 481
           E     + V+ V  ++   SV K+ + +  + +    V   ++  AE ++A  S EKS K
Sbjct: 431 EMSPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEEQVSTVNRDAAETSLAGPSSEKSSK 490

Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
           +VRF+MKNNLVWKPH PLPP+ LR PP+ TPRGSALK+GIP GP+ E  +   + K +  
Sbjct: 491 RVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVRELASRKTKKKVKPA 529

Query: 542 AMRAKKGVRSLPVK 553
           A R  K +++L  K
Sbjct: 551 ARRGVKSIKNLKKK 529

The following BLAST results are available for this feature:

BLAST of Spg017095 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875379.1	8.7e-273	89.05	ribosomal RNA processing protein 1 homolog [Benincasa hispida]	[more]
XP_022149903.1	3.3e-272	88.91	ribosomal RNA processing protein 1 homolog [Momordica charantia]	[more]
XP_008450828.1	9.9e-269	88.15	PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556...	[more]
XP_023546269.1	1.2e-266	84.98	ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022929687.1	4.6e-266	84.47	ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ...	[more]

BLAST of Spg017095 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YK2	1.8e-23	34.21	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P...	[more]
Q14684	8.5e-21	34.29	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE...	[more]
P56183	1.9e-20	30.90	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE...	[more]
P56182	5.5e-20	30.77	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=...	[more]
Q9Y7M6	1.2e-19	37.50	Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of Spg017095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D805	1.6e-272	88.91	ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7U008	4.8e-269	88.15	Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BR64	4.8e-269	88.15	ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A6J1ENE5	2.2e-266	84.47	ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K5Q1	4.2e-265	84.13	ribosomal RNA processing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Spg017095 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20600.1	4.3e-129	47.65	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 13..214 e-value: 9.5E-55 score: 185.7
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 13..543
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 593..641
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 593..611
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 616..641
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..522
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA-PROCESSING 1	coord: 13..543

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017095.1	Spg017095.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0030688	preribosome, small subunit precursor