Spg016896 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016896
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	3-hydroxy-3-methylglutaryl-coenzyme A reductase 3
Location	scaffold9: 40727306 .. 40728410 (-)
RNA-Seq Expression	Spg016896
Synteny	Spg016896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGAAAAGTCCGCTAACCTCTGTAGCGTATTTCGCAAGCGACTCTTCCGTATAAATTCATTCCCGCCATCACGTTTTAACTTCACAATCATTCTTGAGGCTTACCTTTCATTAATGGTTGAAGCATTTCCCTGGTTAGAGTTCTCTCTCGTCTTTCTCAGTTTTGCCCTAGGATTTTCTACTAGGGTTTTGTTATTGCCTGGTTCTTCGAATTTCATGGCATTACCATCTTTCCGAGGCAATGGTGCGTGTTGAATCTTCTGCTTCGTGTTCTGATTTTCGATTTACTCATGCGCTCGCTCGCGCCATTTCTTCTTTTGAGTTTTTCTCCAGGGTTTGGGCTAGGGCTTCATTGTTGTTATCATGATTCAATGTGATACTGCCGTTTCGAGTGGTACAATTTGCTTCCTGTCAATTTACCGTTACTCAGATTTCATATATCTTGCGCTGGAGATATTTATATCATATTTTGCAGATGATTTGAGATCAGAAAAGTCTCGGAGTATTAGATTTTCTCACTATTTCGTCATCTTCGCCGATAAGAGCACATCGGTGTTTTTGAATCATATGCATTCTCAACAGAGTTATTGGGCTAAAATCCTTGTCTGTTTTAACCATTCGCGCTACTCTGTAAATATTTTATTAGAAAGGATGAGAAGCTCATCATTATCTTCGGAAACTGAAGGTGTCCTTACATTGCTTACATTTCGCATAACATGGTCTCTAAAGGCGTGCAGAACGTTCTCGATTTCTTACAGGAGGATTTCCCTGACATGGATGTAATCGGCATTTCCGGTAAGTTAATAGTACAAGAAAATTACATCATGTTTCTATTTATTTTAAAAAAATAGTACAAAAAAATTACAATAACTTATTCGATTTCATTCCCAAAATCATTTCAAAATCATTTGATTGTGGTTGATTAGGAAATTTCTGCTTGGATAAGAAACCGGCTGCTGTGAACTGGGATGAAGGAAGGGTGAAGTACGTGGTTTGTGAGGCCATAATTAAAGACGATGTGGTGAGGAAGGTATTGAAAACAAACATGGAGGCTCTGGCCACGTGAAATCCTTGCCATCATTCACGGCCTCCATCATTGCCGTGA

mRNA sequence

CGTGAAAAGTCCGCTAACCTCTGTAGCGTATTTCGCAAGCGACTCTTCCGTATAAATTCATTCCCGCCATCACGTTTTAACTTCACAATCATTCTTGAGGCTTACCTTTCATTAATGGTTGAAGCATTTCCCTGGTTAGAGTTCTCTCTCGTCTTTCTCAGTTTTGCCCTAGGATTTTCTACTAGGGTTTTGTTATTGCCTGGTTCTTCGAATTTCATGGCATTACCATCTTTCCGAGGCAATGATGATTTGAGATCAGAAAAGTCTCGGAGTATTAGATTTTCTCACTATTTCGTCATCTTCGCCGATAAGAGCACATCGAACGTTCTCGATTTCTTACAGGAGGATTTCCCTGACATGGATGTAATCGGCATTTCCGGAAATTTCTGCTTGGATAAGAAACCGGCTGCTGTGAACTGGGATGAAGGAAGGGTGAAGTACGTGGTTTGTGAGGCCATAATTAAAGACGATGTGGTGAGGAAGGTATTGAAAACAAACATGGAGGCTCTGGCCACGTGA

Coding sequence (CDS)

CGTGAAAAGTCCGCTAACCTCTGTAGCGTATTTCGCAAGCGACTCTTCCGTATAAATTCATTCCCGCCATCACGTTTTAACTTCACAATCATTCTTGAGGCTTACCTTTCATTAATGGTTGAAGCATTTCCCTGGTTAGAGTTCTCTCTCGTCTTTCTCAGTTTTGCCCTAGGATTTTCTACTAGGGTTTTGTTATTGCCTGGTTCTTCGAATTTCATGGCATTACCATCTTTCCGAGGCAATGATGATTTGAGATCAGAAAAGTCTCGGAGTATTAGATTTTCTCACTATTTCGTCATCTTCGCCGATAAGAGCACATCGAACGTTCTCGATTTCTTACAGGAGGATTTCCCTGACATGGATGTAATCGGCATTTCCGGAAATTTCTGCTTGGATAAGAAACCGGCTGCTGTGAACTGGGATGAAGGAAGGGTGAAGTACGTGGTTTGTGAGGCCATAATTAAAGACGATGTGGTGAGGAAGGTATTGAAAACAAACATGGAGGCTCTGGCCACGTGA

Protein sequence

REKSANLCSVFRKRLFRINSFPPSRFNFTIILEAYLSLMVEAFPWLEFSLVFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFSHYFVIFADKSTSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKTNMEALAT

Homology

[Close]

BLAST of Spg016896 vs. NCBI nr
Match: XP_038888927.1 (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Benincasa hispida])

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-22
Identity = 71/125 (56.80%), Postives = 80/125 (64.00%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      + K+  +RFS        +    K 
Sbjct: 308 MFLEEPENFETLALVFNKSSRFARLQNIK---CAIAGKNLYMRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEAIIK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. NCBI nr
Match: QTH36770.1 (HMG-CoA reductase 3, partial [Siraitia grosvenorii])

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-22
Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 104 KSTSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVL 163
           K   NVLDFLQ+DFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEAIIK DVVRKVL
Sbjct: 376 KGVQNVLDFLQDDFPDMDVIGISGNFCSDKKPAAVNWVEGRGKSVVCEAIIKGDVVRKVL 435

Query: 164 KTNMEAL 171
           KTN+EAL
Sbjct: 436 KTNVEAL 442

[Close]

BLAST of Spg016896 vs. NCBI nr
Match: XP_004144569.1 (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Cucumis sativus] >KGN43374.1 hypothetical protein Csa_020236 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-22
Identity = 70/125 (56.00%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      + K+   RFS        +    K 
Sbjct: 308 MFLEEPENFETLALVFNKSSRFARLQNIK---CAIAGKNLYTRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEA+IK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAVIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. NCBI nr
Match: XP_008451185.1 (PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Cucumis melo] >KAA0059592.1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Cucumis melo var. makuwa] >TYK08125.1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-22
Identity = 70/125 (56.00%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      + K+   RFS        +    K 
Sbjct: 308 MFLEEPENFETLALVFNKSSRFARLQNIK---CAIAGKNLYTRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEA+IK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAVIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. NCBI nr
Match: XP_023554472.1 (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-22
Identity = 71/125 (56.80%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      S K+  +RFS        +    K 
Sbjct: 308 IFLEEPENFETLALVFNKSSRFARLQNIK---CAISGKNLYMRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKK AAVNW EGR K VVCEAIIK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAIIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. ExPASy Swiss-Prot
Match: Q9XHL5 (3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HMG3 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 8.3e-24
Identity = 63/124 (50.81%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 52  FLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKST 111
           FL  ++ F+T  ++   SS F  L   +G     + ++  +RFS        +    K  
Sbjct: 289 FLEDSVNFNTLSMVFNRSSRFARL---QGVQCAMAGRNLYMRFSCCTGDAMGMNMVSKGV 348

Query: 112 SNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKTN 171
            NVLD+LQ+DFPDMDVI ISGNFC DKKPAAVNW EGR K VVCEA+IK+DVV+KVLKTN
Sbjct: 349 QNVLDYLQDDFPDMDVISISGNFCSDKKPAAVNWIEGRGKSVVCEAVIKEDVVKKVLKTN 408

[Close]

BLAST of Spg016896 vs. ExPASy Swiss-Prot
Match: A0A0A1C3I2 (3-hydroxy-3-methylglutaryl coenzyme A reductase 1 OS=Panax ginseng OX=4054 GN=HMGR1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.3e-24
Identity = 67/124 (54.03%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 52  FLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRF-----SHYFVIFADKST 111
           FL   L F T  ++   SS F  L S + +    + K+  IRF         +    K  
Sbjct: 301 FLEDPLNFDTLAVVFNKSSRFARLQSIQCS---MAGKNLYIRFCCSTGDAMGMNMVSKGV 360

Query: 112 SNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKTN 171
            NVL+FLQ DFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEAII DDVV+KVLKT 
Sbjct: 361 QNVLEFLQSDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIITDDVVKKVLKTT 420

[Close]

BLAST of Spg016896 vs. ExPASy Swiss-Prot
Match: O64967 (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Gossypium hirsutum OX=3635 GN=HMG2 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 104 KSTSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVL 163
           K   NVLDFLQ DFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEAII+ DVVRKVL
Sbjct: 410 KGVQNVLDFLQTDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIEGDVVRKVL 469

Query: 164 KTNMEAL 171
           KT++E+L
Sbjct: 470 KTSVESL 476

[Close]

BLAST of Spg016896 vs. ExPASy Swiss-Prot
Match: U5JCC6 (3-hydroxy-3-methylglutaryl coenzyme A reductase 2-B OS=Panax ginseng OX=4054 GN=HMGR2 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-23
Identity = 65/124 (52.42%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 52  FLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKST 111
           FL   + F T  L+   SS F  L   +G     + K+  +RF+        +    K  
Sbjct: 317 FLEDPMNFETLALVFNKSSRFGRL---QGIKCAIAGKNLYMRFTCSTGDAMGMNMVSKGV 376

Query: 112 SNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKTN 171
            NVLDFLQ DFPDMDV+GISGN+C DKKPAAVNW EGR K VVCEAIIK++VV+KVLKTN
Sbjct: 377 QNVLDFLQNDFPDMDVMGISGNYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTN 436

[Close]

BLAST of Spg016896 vs. ExPASy Swiss-Prot
Match: P48021 (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Camptotheca acuminata OX=16922 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.1e-23
Identity = 63/124 (50.81%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 52  FLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKST 111
           FL   L F T   +   SS F  L + +      + K+  +R+S        +    K  
Sbjct: 321 FLENPLNFETLAAVFNSSSRFGKLQNIK---CAIAGKNLYMRYSCSTGDAMGMNMISKGV 380

Query: 112 SNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKTN 171
            NVLDFLQ+DFPDMDVIGISGN+C DKKPAAVNW EGR K VVCEA+IK++VV+KVLKTN
Sbjct: 381 QNVLDFLQDDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTN 440

[Close]

BLAST of Spg016896 vs. ExPASy TrEMBL
Match: A0A5A7UUL1 (3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00020 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 70/125 (56.00%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      + K+   RFS        +    K 
Sbjct: 308 MFLEEPENFETLALVFNKSSRFARLQNIK---CAIAGKNLYTRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEA+IK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAVIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. ExPASy TrEMBL
Match: A0A0A0K2Z2 (3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucumis sativus OX=3659 GN=Csa_7G029390 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 70/125 (56.00%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      + K+   RFS        +    K 
Sbjct: 308 MFLEEPENFETLALVFNKSSRFARLQNIK---CAIAGKNLYTRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEA+IK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAVIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. ExPASy TrEMBL
Match: A0A1S3BRZ3 (3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucumis melo OX=3656 GN=LOC103492557 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 70/125 (56.00%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      + K+   RFS        +    K 
Sbjct: 308 MFLEEPENFETLALVFNKSSRFARLQNIK---CAIAGKNLYTRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEA+IK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAVIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. ExPASy TrEMBL
Match: A0A2P5AA26 (3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Parasponia andersonii OX=3476 GN=PanHMGR1 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22
Identity = 68/124 (54.84%), Postives = 80/124 (64.52%), Query Frame = 0


Query: 52  FLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKST 111
           FL   + F T  L+   SS F  L   +G     + K+  +RFS        +    K  
Sbjct: 292 FLEDPVNFDTLSLVFNRSSRFARL---QGIQCAIAGKNAYMRFSCSTGDAMGMNMVSKGV 351

Query: 112 SNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKTN 171
            NVLDFLQ DFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEA+IK+DVV+KVLKTN
Sbjct: 352 QNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAVIKEDVVKKVLKTN 411

[Close]

BLAST of Spg016896 vs. ExPASy TrEMBL
Match: A0A6J1HV93 (3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucurbita maxima OX=3661 GN=LOC111468156 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.6e-22
Identity = 70/125 (56.00%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 51  VFLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRFS-----HYFVIFADKS 110
           +FL     F T  L+   SS F  L + +      + K+   RFS        +    K 
Sbjct: 308 IFLEEPENFETLALIFNKSSRFARLQNIK---CAIAGKNLYTRFSCSTGDAMGMNMVSKG 367

Query: 111 TSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKT 170
             NVLDFLQEDFPDMDVIGISGNFC DKK AAVNW EGR K VVCEAIIK DVVRKVLKT
Sbjct: 368 VQNVLDFLQEDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAIIKGDVVRKVLKT 427

[Close]

BLAST of Spg016896 vs. TAIR 10
Match: AT1G76490.1 (hydroxy methylglutaryl CoA reductase 1 )

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-21
Identity = 59/124 (47.58%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 52  FLSFALGFSTRVLLLPGSSNFMALPSFRGNDDLRSEKSRSIRF-----SHYFVIFADKST 111
           FL     F T  ++   SS F  L S +      + K+  +RF         +    K  
Sbjct: 364 FLENPENFDTLAVVFNRSSRFARLQSVKCT---IAGKNAYVRFCCSTGDAMGMNMVSKGV 423

Query: 112 SNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVLKTN 171
            NVL++L +DFPDMDVIGISGNFC DKKPAAVNW EGR K VVCEA+I+ ++V KVLKT+
Sbjct: 424 QNVLEYLTDDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAVIRGEIVNKVLKTS 483

[Close]

BLAST of Spg016896 vs. TAIR 10
Match: AT2G17370.1 (3-hydroxy-3-methylglutaryl-CoA reductase 2 )

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 104 KSTSNVLDFLQEDFPDMDVIGISGNFCLDKKPAAVNWDEGRVKYVVCEAIIKDDVVRKVL 163
           K   NVLDF++ +FPDMDVIGISGN+C DKK +AVNW EGR K+VVCEA IK ++V KVL
Sbjct: 343 KGVQNVLDFVKSEFPDMDVIGISGNYCSDKKASAVNWIEGRGKHVVCEAFIKAEIVEKVL 402

Query: 164 KTNMEAL 171
           KT++EAL
Sbjct: 403 KTSVEAL 409

The following BLAST results are available for this feature:

BLAST of Spg016896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888927.1	1.2e-22	56.80	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Benincasa hispida]	[more]
QTH36770.1	2.0e-22	85.07	HMG-CoA reductase 3, partial [Siraitia grosvenorii]	[more]
XP_004144569.1	2.6e-22	56.00	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Cucumis sativus] >KGN43374.1 ...	[more]
XP_008451185.1	2.6e-22	56.00	PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Cucumis melo]...	[more]
XP_023554472.1	2.6e-22	56.80	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Cucurbita pepo subsp. pe...	[more]

BLAST of Spg016896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHL5	8.3e-24	50.81	3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Oryza sativa subsp. japonic...	[more]
A0A0A1C3I2	8.3e-24	54.03	3-hydroxy-3-methylglutaryl coenzyme A reductase 1 OS=Panax ginseng OX=4054 GN=HM...	[more]
O64967	1.4e-23	80.60	3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Gossypium hirsutum OX=3635 ...	[more]
U5JCC6	3.2e-23	52.42	3-hydroxy-3-methylglutaryl coenzyme A reductase 2-B OS=Panax ginseng OX=4054 GN=...	[more]
P48021	7.1e-23	50.81	3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Camptotheca acuminata OX=1692...	[more]

BLAST of Spg016896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUL1	1.3e-22	56.00	3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0K2Z2	1.3e-22	56.00	3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A1S3BRZ3	1.3e-22	56.00	3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A2P5AA26	1.6e-22	54.84	3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Parasponia andersonii OX=3476...	[more]
A0A6J1HV93	3.6e-22	56.00	3-hydroxy-3-methylglutaryl coenzyme A reductase OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Spg016896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76490.1	1.0e-21	47.58	hydroxy methylglutaryl CoA reductase 1	[more]
AT2G17370.1	1.8e-21	68.66	3-hydroxy-3-methylglutaryl-CoA reductase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009023	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily	GENE3D	3.30.70.420		coord: 101..144 e-value: 1.7E-13 score: 53.0
IPR009023	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily	SUPERFAMILY	55035	NAD-binding domain of HMG-CoA reductase	coord: 103..144
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PFAM	PF00368	HMG-CoA_red	coord: 104..171 e-value: 1.4E-13 score: 50.7
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PANTHER	PTHR10572	3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE	coord: 103..171
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PROSITE	PS50065	HMG_COA_REDUCTASE_4	coord: 102..171 score: 20.440809
None	No IPR available	PANTHER	PTHR10572:SF39	3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE	coord: 103..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016896.1	Spg016896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015936	coenzyme A metabolic process
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity