Spg016838 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg016838
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPeptidase A1 domain-containing protein
Locationscaffold9: 45356655 .. 45358747 (-)
RNA-Seq ExpressionSpg016838
SyntenySpg016838
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTCCACCAGCATCTTGCTTGTTTTTTTTCGAATATACCATCACTGGTTCATGGGCATTTGGAGATTATTGTTAAACAGTTTTCTGATGAAACAGCAGGGATTGATTTATAGGCTTGGTGCTTTTGTTTACTGACCGATTCTCAAGAAAATACCTTCAAAGATTAGCATTCACATCTAAACTGCAGTAACTGCTAATATGTTTTGCATCTATGTTGTGCCTTCTGATATAGTGCTTCTCTTTTGTCCGGAAGGTTAGTTTAGATAGTCTTTAAAATGCTATTGATCAGTTATATTGATCACATTTGTGTGTATGTATATGATGTCATGTTCACATTCTTATTCTCTACTTATTTCTGCCCACAACTTGGACTAGTTTTCCCTTCTATATTGCTCGACCATATAATTTTTTTCCCATGTCTGGATTTTTACAGGACATGGATGGAACAGCACTTCTGGTCTATGATGACTATTGTAGTAGCAGTTACCTTAGTTGTTGGATTGGCAGCCGTAAGCACATGGTTGATTTGGAGATACAGACGGAGGGAGCTGAGTTCTTATGAGCCTGTCGGTGTAGCCGGACCTGAGCAAGAGCTTCAGCCACTATAGATCCCAATTTTTTATTTTTTTGGTTGGAAATACGATTCTGTTTATCAGGTGTATAGTTTTGATTTAAAGAAAAGATGTGATTTGGTTAGGGAGAGAAACTTGAATTCTAAATAGCTTTTAAAACTGACTGCATATGGTAGTCACTGATACCATGAAAGGTTTAAGGACTAGGGATAAAACCTTGTACACTGATAAAGAGTTGTAGTAAAACCACAGGAAGAAGGAAAAGAAACCACACCAAACAAAAACATGTGTTGGGAAACATGAATTTTTATTTAAATGGCCTCTGTATTTTTTGAGAAATTGAACCAGGGACAAAGTTGTACAGCCCTGACCTGTACCCAGTGCCCATTATTACAGGTTGGGTTCTCTTGTTTCAGAATATTCATTTTACTCATGAGGTAGATTTGATTTATGGACCATAAACAAGGTAATATTACATGGATCTTTTATAATGTAAAAAGAAGACATTTTTGACGTGTCATTTTTTTAAGGTTGTACATTCCGCAGTCAAAAGTGAAGGATTGCTTACAGGTTTCAACATTAAATTCTGTAGTTTTCACCCATGGAAGAGGACTCTCCCCCAATCCAGAACTTGGCCCACGTTGGGGCTTCAGTGACAATGCCAATCCATGTATGTCCTCAGATCCAGTGTGAAGCGGCCCCCATTGTAAGTTTTTTAAAAATCAAATCATATCAAACAATATAATGTATTCAATTCTTCATTTCACATTTTTACCCCTACCCCTACTAGCCTGTAAAAATAGGAGGGCACATGTCACATGTCACATGACCCCTCCCCATGGCCTATTCTTGCGAATAAGATTTAACTTTACACAACACAACCCAATTGCATTTGAATAAACTAAATACCATTTCTGTCTTTTTCCATGGTTTCAAAGGAAGGAAAAAAAAAAAAAAAGGGAAAGGAAAAAGAAGAAAGAATCATATGAAATGGTATTTTTGGGGGAGGGCAAATTGTGTTGTCTCATCTCCTTCCCAATGATAAAGGGTAAGACATCTGAGAGGCTTCGTCCTCATCGTCTTTTGAGCAGCTTTGTTGTGGTGTGGCTATGAAATCAGACGGCTAAGATCACATGGCCGATACAATAAAAACTCAGATAGAAATTGCAAAAGCCAAACCATAGCAGAAGAGGAAGGTGGGTGGCAGTTGCAGGCAGATGGATTCGTTACGATCTCCTTGTTTTTCTTTAAACAAAAAAAAAAAAAAAATACAGGTCAGGGAGATTCCAGAGCTGCTGTAAAGTGCTTGGCTTTGCATAGTTAGACGAAAATACCCCTACCCAGATCCTAGCTCCCAGTTCCCACCACCTTCCTCTTTACCTAATACTCAGCGAGAGTTGCGGTGATATGGACTTTTTTGATCTCTCTAATTAGCGGCAGAAACATAGATATATATTAGATATATAATATGAAGTTGAAGAAGGATTGTGTAATCCAGGGATAAGTCAAGTGTTGGG

mRNA sequence

ATGGGGTTCCACCAGCATCTTGCTTGTTTTTTTTCGAATATACCATCACTGGTTCATGGGCATTTGGAGATTATTGTTAAACATGCTTCTCTTTTGTCCGGAAGGACATGGATGGAACAGCACTTCTGGTCTATGATGACTATTGTAGTAGCAGTTACCTTAGTTGTTGGATTGGCAGCCGTAAGCACATGGTTGATTTGGAGATACAGACGGAGGGAGCTGAGTTCTTATGAGCCTGTCGGTGTAGCCGGACCTGAGCAAGAGCTTCAGCCACTATAG

Coding sequence (CDS)

ATGGGGTTCCACCAGCATCTTGCTTGTTTTTTTTCGAATATACCATCACTGGTTCATGGGCATTTGGAGATTATTGTTAAACATGCTTCTCTTTTGTCCGGAAGGACATGGATGGAACAGCACTTCTGGTCTATGATGACTATTGTAGTAGCAGTTACCTTAGTTGTTGGATTGGCAGCCGTAAGCACATGGTTGATTTGGAGATACAGACGGAGGGAGCTGAGTTCTTATGAGCCTGTCGGTGTAGCCGGACCTGAGCAAGAGCTTCAGCCACTATAG

Protein sequence

MGFHQHLACFFSNIPSLVHGHLEIIVKHASLLSGRTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL
Homology
[Close]
BLAST of Spg016838 vs. NCBI nr
Match: XP_038898702.1 (aspartic proteinase 39-like [Benincasa hispida])

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-22
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWSMMTI VAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGV GPEQELQPL
Sbjct: 631 KTWMEQHFWSMMTIGVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVVGPEQELQPL 688

[Close]
BLAST of Spg016838 vs. NCBI nr
Match: KAG7024286.1 (Aspartic proteinase-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWSMM+IV AVTLVVGLAA STWLIWRYRRRELSSYEPVG  GPEQELQPL
Sbjct: 623 KTWMEQHFWSMMSIVAAVTLVVGLAAGSTWLIWRYRRRELSSYEPVGAVGPEQELQPL 680

[Close]
BLAST of Spg016838 vs. NCBI nr
Match: KAG6591408.1 (Aspartic proteinase-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWSMM+IV AVTLVVGLAA STWLIWRYRRRELSSYEPVG  GPEQELQPL
Sbjct: 671 KTWMEQHFWSMMSIVAAVTLVVGLAAGSTWLIWRYRRRELSSYEPVGAVGPEQELQPL 728

[Close]
BLAST of Spg016838 vs. NCBI nr
Match: XP_022936107.1 (aspartic proteinase-like protein 2 [Cucurbita moschata])

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWSMM+IV AVTLVVGLAA STWLIWRYRRRELSSYEPVG  GPEQELQPL
Sbjct: 653 KTWMEQHFWSMMSIVAAVTLVVGLAAGSTWLIWRYRRRELSSYEPVGAVGPEQELQPL 710

[Close]
BLAST of Spg016838 vs. NCBI nr
Match: XP_023535922.1 (aspartic proteinase-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWSMM+IV AVTLVVGLAA STWLIWRYRRRELSSYEPVG  GPEQELQPL
Sbjct: 591 KTWMEQHFWSMMSIVAAVTLVVGLAAGSTWLIWRYRRRELSSYEPVGAVGPEQELQPL 648

[Close]
BLAST of Spg016838 vs. ExPASy TrEMBL
Match: A0A6J1F7I1 (aspartic proteinase-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111442809 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWSMM+IV AVTLVVGLAA STWLIWRYRRRELSSYEPVG  GPEQELQPL
Sbjct: 653 KTWMEQHFWSMMSIVAAVTLVVGLAAGSTWLIWRYRRRELSSYEPVGAVGPEQELQPL 710

[Close]
BLAST of Spg016838 vs. ExPASy TrEMBL
Match: A0A6J1IH74 (aspartic proteinase-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111477188 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 8.2e-21
Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWME HFWSMM+IV AVTLVVGLAA STWLIWRYRRRELSSYEPVG  GPEQELQPL
Sbjct: 649 KTWMELHFWSMMSIVAAVTLVVGLAAGSTWLIWRYRRRELSSYEPVGAVGPEQELQPL 706

[Close]
BLAST of Spg016838 vs. ExPASy TrEMBL
Match: A0A5A7VA17 (Aspartic proteinase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001390 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-20
Identity = 49/58 (84.48%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 35   RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
            +TWMEQHFWS+MTI +AVTLVVGLAA STWLIWRYRRR++SSYEPVGV GPEQELQP+
Sbjct: 1121 KTWMEQHFWSIMTIGLAVTLVVGLAAGSTWLIWRYRRRDMSSYEPVGVVGPEQELQPI 1178

[Close]
BLAST of Spg016838 vs. ExPASy TrEMBL
Match: A0A1S3BTN6 (aspartic proteinase-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103493586 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-20
Identity = 49/58 (84.48%), Postives = 55/58 (94.83%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWS+MTI +AVTLVVGLAA STWLIWRYRRR++SSYEPVGV GPEQELQP+
Sbjct: 587 KTWMEQHFWSIMTIGLAVTLVVGLAAGSTWLIWRYRRRDMSSYEPVGVVGPEQELQPI 644

[Close]
BLAST of Spg016838 vs. ExPASy TrEMBL
Match: A0A0A0L518 (Peptidase A1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642320 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.1e-20
Identity = 50/58 (86.21%), Postives = 53/58 (91.38%), Query Frame = 0 

Query: 35  RTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEPVGVAGPEQELQPL 93
           +TWMEQHFWS+ TI VAVTLVVGLAA STWLIWRYRRR+ SSYEPVGV GPEQELQPL
Sbjct: 582 KTWMEQHFWSITTIGVAVTLVVGLAAGSTWLIWRYRRRDTSSYEPVGVVGPEQELQPL 639

[Close]
BLAST of Spg016838 vs. TAIR 10
Match: AT5G43100.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05
Identity = 24/73 (32.88%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 20  GHLEIIVKHASLLSGRTWMEQHFWSMMTIVVAVTLVVGLAAVSTWLIWRYRRRELSSYEP 79
           G  +++   A     ++W E+H   ++   + ++L+V    +   L+WR R++E ++YEP
Sbjct: 553 GSYKLLEWKAEQKKKQSWWEKHLLGVVGGAM-ISLLVTSVMIKLALVWRRRKQEEATYEP 612

Query: 80  VGVAGPEQELQPL 93
           V  A  EQELQPL
Sbjct: 613 VNAAIKEQELQPL 624

The following BLAST results are available for this feature:
BLAST of Spg016838 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038898702.11.1e-2294.83aspartic proteinase 39-like [Benincasa hispida][more]
KAG7024286.12.6e-2189.66Aspartic proteinase-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6591408.12.6e-2189.66Aspartic proteinase-like protein 2, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_022936107.12.6e-2189.66aspartic proteinase-like protein 2 [Cucurbita moschata][more]
XP_023535922.12.6e-2189.66aspartic proteinase-like protein 2 [Cucurbita pepo subsp. pepo][more]
BLAST of Spg016838 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg016838 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F7I11.3e-2189.66aspartic proteinase-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111442809... [more]
A0A6J1IH748.2e-2187.93aspartic proteinase-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111477188 P... [more]
A0A5A7VA171.4e-2084.48Aspartic proteinase-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A1S3BTN61.4e-2084.48aspartic proteinase-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103493586 PE=3 ... [more]
A0A0A0L5184.1e-2086.21Peptidase A1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G64232... [more]
BLAST of Spg016838 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G43100.12.8e-0532.88Eukaryotic aspartyl protease family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg016838.1Spg016838.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen