Spg016521 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016521
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	sister chromatid cohesion protein PDS5 homolog A
Location	scaffold9: 40433770 .. 40447655 (+)
RNA-Seq Expression	Spg016521
Synteny	Spg016521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGTCTTCGCTGCAGCTCATCCACGACGTCGGGACTAAATTGTGCAAACAGTCTCGCCCAACTAAGGATTACATCGTCAAATCCCTCCGGGTAATGTTTCTACTCTGAATTTACTTTCGTAATTCCGTTTCTGAATCTCTCCAGTCAGTCTGATCGCTCGCATTGTCGTCGGGGTGTTCTTCGCTGCTTACTGTCGACTGAGCAAGTTGATAATGGTCCTGTTTTCGTGGCTAATCGTAAGTTGATACACGTTTTGTTCGTTTTCACGAAGATTGAAGGGTTTTTATAGGGTTTTGTTCAAAATTTTGGGCGAAAACTTGTCAATGTAGTATTTTGTTTCCTAATTATCTTCAATTAAGAATGTTAGAAGGATACGCTTCTGTTCATACTGACGCAGTCCTGCTAGTGAAGAATGTGCGTAGTTCGTTCCAGTTGGTTGAACTTGGACCTTCCGGCACTAATAGCTCGTTCTCTCCATCTGTCTCTCTGCACCCACAGCTAACAGCTCTTGAGCTGATGGACACAACCAATTCTATTGAGTGTTAAAAGAATTACGCATTGAAATTGTCGGTTATTCGGTTGTATTTTGTTTTCACACGTAAATCCGAATATGTCTGTTGAATTTTTTATCTTATACATTTACGAATATTTTGTTTATGAGATTTTGTTAATTTCTTAGAATGAAAATAATTCATCCTTTTCTGTATTATCCCATCGATAAAACTTCAAGTCTCGTTTTTTTTAGCGCCAATTCATGAATTATCATGTATTCCTCGTTACTCGATCTTCCATTTTTCCATTGCAGCAAGTTGTAGACGCTTTTGCATGTTTGGAACAGCCTTACGTCCCAGATGCTACAAGGAAGTCAGAATCAACTAAAATATTAGAGAGTTCTATAAAGCCTCTAAGGAAATCTATAATTAATGGTCTTCTACGAAATAGAGATAAAGATGTGAGATTTCTATTTGCTATATGAGTGAGTGAAATTTTTCGGGTCATGGCACCAGAACCACCTTTTGAAGACAAATATCTAAGGGTAACAAATCATTAATTTCGATGAAATGCACACTCTCTCTTTGCACATATATTGGCTCTTCATGTCATTAATTCATGTTCATCTTTCTGTTTACTATACAATTGATCCCATTTTTTTTTTAAAAAAAATTATAGGATGTTTTTATACTTCTTTTGAGTTCTTTTTCAGAGCTAGCGGATATGACAAGTCCACTTTTCTCTCGGAGGGTTAAAATACTAGAGACAGTGGCACGATGTAAATGCTGTGTGATAATGCTTGACGTTGGATGCAATGACTTGGTGTTGGAGATGTTTAATACATTTTTCTCTGCTTTGAGGTCAGTACCCTTTATCTTGCAATGCTCTAGTATTGGTACTTGCGCTCTTTTTTTCAGTGTGTTTAATAAATATTACTGATTTTCTGTTATGCCAATTTTTTAAGTAACTTTTTTTTTTTTGGTTTATTCAATTAGGTATCTCACTTTCTTCTGTTCTTCTTTACCCTGCAAACGAAAGATCAACACAGTCCAAACCAAAAGAACACAACAGCTGGAATTCCAACCCATCACAGAGAGTTCTTCTATGACTAGGAGGAAGTTATCTATTCCGCAAAGGATTCCCCAAAACAGAGTTTTGTTCCAACAAAATACAACTAGATCAGCACAGAAACTAAGAACACATAAGAAGAAATAAGTAGCAAGAACAAGCTAAACACTCGGTATTCGAGAGATTGAGACTCTCCAAGGGCCAAGCCTATTCCAAAACATTCCACCCTCCTCCCCAGCTGTCCTCACTCCTACAAAAAGCTTCTTTGAGTCTAACAGCCATACACTCCATGATGCCAAGGCCTAACGGTCCCCACTGTAGCCAACTTCTCCTTCTTCATTCGTATTTAACTCTTTGCCCTTTCTCTTGTATGTGTGTATTATTGGAGGTCTAACATATTCCTCCAAGTATTTTACAACCGAGGCCTTAAATTTCCCAAATATTGTTCTCAATACTTTCAACTTTAATAGGTCAGTTTTGTTGTGTTCAAGAGTACAGGTTGTATTATATATTGGATATTTGTAGTTTGTTAGAGGAAGAATTTAATTTTTGCTGTGCCTTTATAGGATTTTTATCACAAAAAAAAAAGTTTGTTTTATGCTCTGTTATAATTATAAACAAGTTATTTTCAAAAAAAAAAATATAATAATAAATAATTATAAACAAGTTCCCTTTGAGGCAGTGGATTCATGTTGGGGAGTATTCAATATAGTTCCCTTTCTAGCCCTTAACTAAAATGTCTATGATATGCCCTTTTGCTCGCTCATTTTTCTTTAATACATGTAAGTTTGAAATAGAGACAACAAGTTGTCACTTGTAGAAAATATGTAATTTTGGATGATATAGGTTGTTAGTGTATTTAGTGTAATAATTTCTATTAGACTCAAAAATCAACTTGTCATCTGTATTTTATGCATGCTGTTCTATATTTTATTTGTTGGTTTACATTCACCGTACAAACCTTTTGAGTTGTTTCATATTTACAATAACTCTTTTTTCTATAGGGACTACCACGAGCCTAGTTTGGTTAACAACATTTTGTCAATAATGACCCATATTCTAAGTGAGGATGCTTCTCTACCACTAGTAGATGTGGTTTTGCATAATCTTCTAAAGGAAGAAAAGGTAAGTATAATAGATTGATGTTTTTTACCCTACCTGCTTTGGAGTGATTAGAAATATTCTTTACAGTCATTGTTATTATCTTGTACTTACATAGTTCAGTACGATAGTTTTAATAATCTTGTTGACTGATGGTGAGTTGTATAATTAGTTGATTTGGTGAGATAGGGAAATTTAGGGCTATTTGATTAATAAAAATCTAATGTTTACAATAGGGAACCTGAGTATTTATCGGCTAGGTTTAAGGGTAAAGGAAATAACTTCATGAGGTAAACAACCCTTAATCTACGGTTACTAGAAAACTTTCTAACCGAACATAAAGTTAACTAGAACATACAATTTAAAAAAATGTTGAGTTTACCAGACAAGTGTAACACGTAGGTTGTTATTCCTAAATCTCTTCACGATTTTGCAAAGCTCAAATGATGACAACACAAATTTTGCTACATCCTTGTGAAGCTGAGGCCAATAAAATGTAATGGTAATTTTGGCTAAAGTTTTATCATGCCTAAAATGTCCACCAATTCCCTAACATGTATGTCCATAATCACTTTTCTGCCTAAGAGATATGTGATATGCAGACTGCAGAGAGCAACCTATTTTCTTTAGAAAGAAATCCTTTAGTGATATCGAGGTCTTCCTTTCTAAGCATGTCTATTTTTACAGTTATTCCAAATCATAGAAAAATTTTCATCATTTTCATATAATTTTGGAATATTTTCCAATGAGACTTGCCCACCCACGATAGATAATTAATGAGATTCTACTTAAAGCACCAATCGCCTTATTGGTGACACAAAAGTTATGTTTAATCAAAAAGTCAGAGCATCATAAGAATGATGTCCATCTAGCATAGTTTTTCATTTTTGGTTGGATAAAGGCATCATAGATTTTCGTGATTAGAGTCTAGAATAAAATTTTCACTAATGTAGACTCTTTATATAATAACCAATAAGCAGTTGGCTAAGTTTTTGATTTGATACCTTCAAATTCTCATCAGCAAGCTACGAATGTTCAAACATTTTTTAACCAACTTGAGAAGAGTTGAAAGTGACGGTTCTTCCTCTCTTATGAATCTTAGTTAATAGCCATCTGATAATTTGACTTCCAGATGCTTGTCATTAGATCTACAGCTGATCTCCAGCGTGCTCTAATAATTTCCTATTAATAAACAAACTCCCTCCTTTTGCATGTCACTGCAGTGATTATATTTATTTTTTGTTTTGGGAAATTCGTGTTTCTATTATAGGTGCTTGCCATTAGATCTACATCTAATCTCCTGTGTGCTAATAGTTTCCAATTTATAAACAATCTCGTTTTGCAGATCACTGCAGAAAGATTTTATTTATTTTTTGTTTTTGGAAACTTTTGTATCTATATTAGGCCTTGATTTGATTAGTGAAGGACAAATAATTTCTTTTGAAACATGTGTTCGAGTTACTCTGTGTTGCCCTGACAACTTGTTAGACCCCCAATATTGCACACGTATGCGAGGAGGGGTAGGAGAGGAAATTCACCCTCGATCTAGGCGGTTAATAGAAGATAAAGAAAGAAGATTAGTGTAATGTAAATAGTTAGCAGTCAATCGGTGTCATCGATGGGGAGTATCTGAATTTTGGGTAGTATATAATGTATTTTTGTTCGGAGAATGGGGATATGAAAAATCCTTAAGTTTGTATACTCTTATCAAGAATGATAAGAGAGTAGGAGACCTCACCATCTCAAACTGGTGTTTGTAACCGATTTCTGTTGATAAATAAAAGCTTTCCTACTAGCTTCCTCACTCTCTGTAATCTGGAATCCTAACAATCTGGTATTTTTGTTCGGAGAATGGGGATATGAAAAATCCTTAAGTTTGTATACTCTTATCAAGAATGATAAGAGAGTAGGAGACCTCACCATCTCAAACTGGTGTTTGTAACCGATTTCTGTTGATAAATAAAAGCTTTCCTACTAGCTTCCTCACTCTCTGTAATCTGGAATCCTAACAATCTGGTATTTTTGTTCGGAGAATGGGGATATGAAAAATCCTTAAGTTTGTATACTCTTATCAAGAATGATAAGAGAGTAGGAGACCTCACCATCTCAAACTGGTGTTTGTAACCGATTTCTGTTGATAAATAAAAGCTTTCCTACTAGCTTCCTCACTCTCTGTAATCTGGAATCCTAACACAACTCTCCTTTTCACATTTTGTAGGTTGAACCTACCGTTGCTTCTCGCCTAGCAGTTTCCATCATTGAAACTTGTGCCGAGACACTTGAACCATTTATTTGTGGATTCTTAACACTGGGGAGTGAACTCAAAGAATTTTACCATGAAATTATTTTTAGAATTTTCCAATGTGTCCCTCAAATGTTTCTTCCTGTGATTCCAAACTTGACTCTTGAGCTTTTGGTATGTCATTTTATTCCCTTTTCACTCTTGTATTGCAACAGTGGTATACAATTATTTGTTATGCTCACCCTCTTTTTCAATTCTTTTTTAAATAATCAATGGTTTCTATGATATAACGAAGTTAACAAAAGGCAGAATAAGACCAAATGAGTGACCATAATAATCTCCAATGTTATAATAAAAGGCAATACTAGCTATATATCTAGAAGATTATTAAAGTATTTACATAGATTGCTCAAATATATAATTAGTCCTTTCTAGATTTATCTTGAGTATTGTAAATAGACATCTAAAAGAAGCTCTAGAATTATCTTACCCTTTCTTTAGACTCCAAGGAATTCTAGAGAATTTCTTTAGATAAGGCTAAACATAGAAATATCTAGGATATTTTAGATCCAAGAAGAGCGTAGAAAAATTCTTTTGCTTGGTCTCTGAGGGTCTTATGTCTATAAATAGGAAGTGTGTCCCCCATAAGCAAGCCAAGTATACAAAGTGAGAAAGAGTGAGTGAGTCAGACCGTCTTTTCTCAAAAGTATCCATCCTTTTACTTTCTTAATAAAAGCTTCTTTCTTCCAAGTGTTTGTCTCTTCCCTTTTGTTCTAATTTCTTCAACATCCAATTGGTCTGATACACAAGATATAGGAGTAATTACGAAATGCTTTTGATTTTAGACTCCAAGAAGCAAAGACAACACGGATCTTGTCCAAGTTTTTTCCCCCTCATTTAAGACTCTTCCTTTACGTTTAAGCCAAATTTCACAAAACAATGCACAAAACAGGCCTAAAGTTGTTTCTTATTATCCTTGGAAGTCGTGCCCACAAAATTACTGAGCCACAAAATCTGTCAGATCTTAGATGTCTTCAGATGTATTATTATTATTATTATTTGTGCGTAAGTTCATTGGCAATGACAATTTTGGTTGAGGCAGTGGTGGGGATTTCTTTTTGAACTCTATTATTTGTGTTCAGCCGCCCCAGAAAAGAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAAAAACCAACTTTCATTGAGAAAAAATGAAAGAATACACGGGCATACAAAAAAACAAGCCCACAAAAAAGGAGCCCCAGAAAAGAGTCCATTAGACAACCTTACACTCCTAAGAGTTTTTGAACTCTAAAGCTCTTTGCAGAAAGCTGGCCGAAGAATAAGAACTCTTTTTGGCCTGATGTTTGGCGAGAGATTTAACAGAGAATATGTCACTCCTTTCAAGAAACCACCCTTTCTAATTCTCCCCAACTTCAACTTCAACCATCTAAACACTGCACCTAATGGTCTCTAATAGTCACTCCTACACAATTTCCAGGATGTTCACTTTGTTTGTTTCCTCATTATATCTCTATCCATTGTAGACAGATCAGGTTGATGTTAGAATAATAGCGGTTTAAAATCATTGGTAGACTTTTAGCTCTTCCTGGACACTGTGTAGCACAGAAGTACCGAGGACTTTTTATGGAGTTTTTGAAAAGGTTTTGCGACAAGTTTGCAGAAGTTAGAATTCATGCCATCCAATGTGCCAAAGATTGTTATATGGCCAATCCTGCTTGTTCAGAATCTTTGGAAGTTCTGGGTCAGTGATTAAGTAGTTATGATGTTATTAGATTCTTAATCCATTATGTATGGTATATCTGATTAGTTGGTACTCATGAACATATCAGGTGCAGTCGAAGAACGATTATTAGACTTAGATGATAGAGTGAGAACACAAGCAATAATTGTTGTTTGTAATATTGTCCGATCAAACATCAAATTTGTTCCAGTGACACTAATATCTCAAGCTGCTGAAAGACTACGAGATAAGAGGGGTATGTGGTTTCTGTTTGCACTAAGCAATCAAAACTCACCTAATATTTAATTTAATTTATTATTATTATTATTTTTTTTGGGTAGATATCAGTTAGGAAAAAAGCCCTTCAGAAATTGTTGGAAGTGTATCGAGATTATTGTGATAAATGTTCCAATGGCCAATTGACTATGAACGATGACTTTGAACAGATTCCATGTAGAGTCTTGATGCTTTGTTATGATAAAGATTGTAAGGAGTTCAGGTTGGCTTATCATTTCTTGGATTGAAACTATTACAATATCTTAAAATATAATAATTATTACCACATTTTAGGTCCCAGTGCACGGAACTTGTTCTTGTGGAAGATTTATTCCCAGATCATCTCTCTGTTGAGGAGAGGACTAGACACTGGATCCATTTATTCTCTCTTTTCAATATCCATCATGAAAAGGCTCTCAGATTTGTTTTGCTGCAAAAACATAGGTATTATCACTAGCACGTTTTCATGGCAATATTACATATAACGTTTTACATTTTTCTTTCATTGTTTGCCTTTGTAGGTTACAAGATGAATTGCGAACTTATTTGAGTTTATGAAAAAAGGACAAGGTATGTTGCCTAACTTCTCTTCTATATTCTGTAGTTTGGTAAATTGTTTGCTGGATTATAGATTCATCTGTTCATGATACGGATCATGTTGTCAAGTTGTAATCCACTTATGTGTTTATTTATTTTGTACATAAAAAACACTAGAACTGATATTGAATCTTCTAAATGCATCTCGAGTCATCGAAGTATGAAGTTCTTGTGCAAAATGCATTTTAGAAGTCAACACATCATACTTGTGATTAATCTTGCGAATTCGCAATCTGATCCCTTTTTCTGGGGAAAAAGAACTCAACTCTCTATATTTTGCCCAAAGTGGTTCTGTGAGGCATGCGTTCTGTTGTGAACCATAGAATCAAAGTCTCATTTACTATCTTTTTTCTTTTTTTACCGAAGGTCAAATTCATAACATGGTTTATTGTCACAGTTGAGTTATGATTAAAAAAAGAAACTTCTTAACAAGTCACAGACGTCTATTGTCTGAACATACAATTTAATTGCAACATTTTGTTGTCTGGTTGCTACAAGAGAACCGATCAGAAGAGATGGAAAAGCAAATTGAAACTGCATTTGTCAAAATGGCAGACTGCTTTCCAGATCCTACAAAAGCAAAGGAGTCCTTTCATAAATTAAATCAAATTAAAGATAATAATATTTTTAATTCGTTGGAGCTTTTACTCGATGAATTGACAATTGTTGAAGCTGAGGCCACCAGAGTGCGTGGTTTACTCTCTCTCTCTCTTCTTTTTGTAGCTTATTTTTTGGTTGATATTTTAGTTGAATTATATGTTAAAATTGTTTTTTGTTGTTGTTGGTTATATATATATATATATATATATATATATATAAATATTTTATATTTTATATTTTATATTTTTAAAAATAGAAAAACCTGCTTTCGTTGAGATAAAATGAAAGAATACAAGGACATACAACCAAGCCCACAAAAGAGAACTCAATTAAAGGAAGGGACTCTAATCCAATAAGATAAGACTTAAAGGATAATTACAAAATAATTTCATAACCGAAGTCCAAAGAGATGCATGGAATCTCGATAAGGACCATACATCGTTCGAACTTCTAACTATCCCCCTAAAAACCATGTTATTTCCCTCCCCCATAAATTCCACAATCATGGAATGTCGGAGTGAGGAGGAACTTTTCGATCAACACTCTCAACTCTAAGTAGCTAGTCCTTTATCGCCCAAATGAATCAAAGAAAAGGTCCCAACTAGAGCGGGCAAAATCAGAGCTCCAAAGAATATGATCCAAATCCACCTTCCCACAAAGGATGCAACAAAATGGGCCAATCAAAGGGAAATTCCTTCTCAGGAACCTGTCAAAGGTATTAACTCTACCCTGGAGAACTTGCCAAACAAAAAACCTAGCCTTCTTCGACACTTTCACTGGTGTAGCCGAAGTTATGAATAAAATCAGAAACTGTATTATGACTAAAACTGAGAACAACCAGCCTTTAAATAGGCTTTTACAGTGGGCTTTAAAGACTAACAGAAAGCACATGATACTCACATGGCTAAGAACCTAAAAACTAACTAACGGCTACATCAGACTTTCCCCGCCCAAAAAAAATAACTCGACCTCGAGTTATGTGGCTGATACAAATTCATCTGGAGGATTGTAAGGATGTATATCAACAACATTGAAAGTAGGATTGATATTGTATTCGGCTGGAAGTTGGACTTTATAAGCATTATCTCCAAATCTTTCCAAAATAGGGACTGGACCAATCTTCTTTTCCTTGAGCTTGTTGTAAGTACCGGTTGGATATCTGCTCTTTCGTAAATGAATCAATAGATAAATCTTCCATAGATAAATCTTCCCAAATATTTTCTGGAATTGGTAGAGGTGAATATAATCCTATATTTTGGGTTGTTCCTTTGCAAGTTTGACAAATATAGCACCTTGTAACATAGTTTTGAACATCTTTTTTAAGTTGTGGCCAGTAGTATCTTTTTTCAGCATGTTTAATGTCTTATCTTTGCCCAAATGTCCAGCCAAACCGCCTGCGTGTGCCTCTCGGATTAATGCTTCTCTTAGGGATGAATAAGGTATGCATAATAAGTCTCCTTTAAAAAGGAATCCTTCTACCAAATGAAAGTCTCCAGCCGGTTTGTGTTCATCCATTAGGCTGTTTAATGCTATAATTTCTCCCTTTAGGATTGTTAGAATGTTTGCTTTACGGCTTAGGGCATCTGCCACTTTGTTAGTAGAACCCGAGGTATGCTTAATAACAAAATCAAAGCGTTGTAAAAAAGACAACCATCTAGCATGCATTCTACTAATTGTTTTTTGAGAATGCAGAAATTTAAGAGAAAAATGACCTGTGAACAAAATGAATTCTTTGCTTAACAAGTAGTGCTCCCATTGTTTTAAAGCTCTAACTAAAGCATATAACTCTTGTTCATATGTTGACCATTTTTGTCTTGATGAACTTAGTTTTTCACTAAGTTATTTTGAGATAGAACCGCTCCAATTCCTATACCCGAAGCATCGACAGCTACTTCAAAAGGAAGATCAAAATTGGGGAGAGCTAAAACAGGGCTGGTTACTAGCTTTTCTTTTATTGTATTGAAGCTTTAATTTTGGTTGTCCCCACAAGAATTGACCTTTCTTTAAACAGTTTGTCAAAGGTGCCACAATTGTACTAAAGTTTTTGATAAATTTTTGGTAAAATGAAGCTAAACCAAGAAAGCTTTGGATTTCTTTGATTGTTTTTGGTTCACTCCATTCTTGAATTGCCTTAATTTTAAGGGGGTCCATTTTTAATTTACTGTGTCCAATAATATATCCTAAGAATGATATTTCTTTAGTGGCAAATAAACATTTCTTTAAGTTAATCACCAAAGCATGTTGCTGTAAAGTAGAAAAAATAATTCTAATGTGATCTATATGTTCTAAAAATCCTTGGCTATATATAAGGATATCATCAAAATAGACCACAATACATTTATTAATAAAAGGATGAAGTACTTGGTTCATAAGTCTCATGAAGGTGCTAGGAGCATTAGAGAGTCCAAATGGCATGACTAACCATTCAAATAAGTCTTCATTTGTTTTGAATGCGGTCTTCTATTCATCACCCGACTTGATTCGTATTTGATGGTATCCACTCTTGAGATCAATTTTTGAAAATATGGTTGCCCCACCTAGTTGATCCAGTAAGTCGTTGATTCTTGGTATGGGGAATCGGTACTTTATAGTTATCTTGTTAATTGCTCGGCTATCCACACACATGCGCCATGAACCATCCTTTTTTGCAGTTCAGAGTGCTGGAACTGCGCAAGGACTAAGACTCGGTTGAATGTGCCCTTTATCTAATAATTCTTGAACTTGATCATGAAGGATTTTGTATTCCTGAGGACTCATTCTATAATGTGAGAGATTTGGTAAAGTAGCTCCTGGAAAAAAGTCTATTGTATGTTGTATTTCACGGAGAGGGGGAAAACCTTTTGGTTCCTCCACTATTTGGTTAAATTCTCCTAAAAGATTCTGAACTTCACTTGGAATAGTAGTAGTGGAATTAGCATTATCAAAATTTTTAATGACTAAACCAAGTATAGGAAGTTTTTCATGAAGAAAATTTTTTCCAGAAGATAGGGTAAAGAGTTGACCTTTCTTGTTTAAGTTGTTGTTTGTTACCGTTTACTTCAAAGGATTGATTGGCAAAAGGACTATTTTCTTCCCCATCCATAAGAACTCATATGTATTGTCTCTTCCTTTATTTGTTGCTTGAACATCATATTGCCATGGTCGCCCTAGGAGGATATGACATGCGTCCATATCTAGCACAACACAAATGATTTGATCTTTGTAGCTTGCTCCAATTGATAATGGTATAGTACTCGTGTGTGTTACTTGGGCTTCTCCACCTTTCTTTATCCAACAAACTTTATAAGGAGCTGGATGTGGATTTAATGGTAGATTTAAGGCTGAAACTAGTTTGCTAGCCACTACATTTTCTGTACTTCCACTATCAATAATAACGTTGCAGATTTTCCCATTAATTGTGCAACGGGTCTTGAATAATGCGTGTGGGTCTGTTTTTGGGGCCAAAAAAAGCCTTTGAATCACCAAGGACAATGGCTCACCTTCATCCGGTTCAAGAAAGTCAATTTGTTCTTCGTTGTCCGAATCTTCACTTTCTTCTTGAAATTCTGCATTATCAGCAATGGCAAGGGTTTTCCTTTGGGGGCATTCATTGGATAGATGCCCTAGGGTTGGTCTAGAATAGGTATTTGCACTCTTCTTTGGTAAAGGATCTTTGGATGTACCCATATCAGTTTGTTTGCCCTTTGATTCTGTAATTGTATTTTGTGAAAAACTTTTCTCAGTTGCATTATTTCTTGAGAATGTATTGCTCTGTTCTCCTACACTTCTTCTTGAATATTGTCTCTTATACCGGTTAGCAATTTGCTCCTGCACCGTGGCAGCTGCTGCAATAGCTTCATTTAAATAGGCTATCGGTTGTAAGGCTATGCGTTCTTGGATGTCTGTTCATAGTCCTCCCTTATAGTGAGCCACTAAATATTGTTGGTTTTCTCCAAGGTTTGTCCGAGCCCACAATCTATGAAATTCTTCAGTATATTCCATTACCGATCTTGTTCCTTGTCGACAATTTTGATATTGATTGTATAGGATTTGTTCAAAATTGGCTGGAAGGAATCTTTCTTTCATCATCTTTTTCATTCTTTCCCACCTTCGGATTGGTCTTTTCCCAAATCTTTGTCGGTTTAAATCCAATTGATCCCACCAAGCTTGAGCTCCTCCTTTTAATTTTAGTGCTACAAGCTTTACTTTCTCGTTGTCGGGTGTGTTCATGTAGTTAAAAAAAATTTCCACATGTCTTACCCATTCCAAGAATGCTTCAATCTCCATCTTCCCACTATAAGTTGGAATATCAATCTTCATTTTGAAGTCGTTCTCTGGTTGTTGATAGGGAATTCTATGGCTTCTTTGTCTTTCCAATTGGATGTCCACTGGTTCATCTTCATCATCACTTGAGGAGTCCGTCCACTCTTGCTGCCTTCTATATAAAGGGTTGTTATTGAAATCTTGATATCTTATTGGAGCCAAATCCCATTCTTGAACTGTTCTTTGCTCAATAATCTGTCTTTCTTGCTGCTGTTTTGCTCTACTATCTTCACTTTGATGATCTTGCTGATTTCTTCCCATGCTCATTTGTGCTGCCAAATGCTGATTGTGTTGGATTTATATTTGGTTGCTCGGTTTTGTTGCCCAAATGAGCATGGGAAGAAATATGCTGATTGTGTTGGATTTATCGTTTGTATCTTTGTTGATGTTAAACTTTTTCCTCTCCATAATATCCATTGGTGTCCTGTCTATGCGTGAAATATGCTCTTTTTGCAGCCCACTCCTATCTGTGTTGCAGATGCTAGTCTATGCAGAATTGCAGATGTAAATGTTGCAAAGGATACTGTTTTGTATTTGCACAGTATTTTTCGTGCCATTAAGAGGGTTGAGGATGCTGTGGATATCAAACATCACCTGTGAGCGTTTGTAGTAATTAATTTATAGCCGCCATTTGTTATCATACAATTTTATCAACTGAAAGGTTGTCTTTTCTTTTTTTATTTTAAAAAAAAATTCAGAAGTTGCACATCTTGGCGGACATTGGTCTCTCTTTTGTAACTACTCTAAATTCTTCTAGAGACTCCCTGTCATGTGCCCCAAAGCAGATTTTGCAGCCGTTATCACTATAAACAGGAAGTTCTGATCTTGAGTTGTGGCAAATACTGGGATCATCAGCCATGGCTATCTGATTCTTTACAGATGTTTCCTAGAATTTCTGGTGGATAAACTAAATTTAAAATTTTGATGTTTCTTTTATTCTCTTTGAAGAGAAACAATTGGATATTGCATTATAGATGATTTTGGATAACAATTGCAAACTTTCGCTTGTTCTTAAAAAAAAGCTGTGTTGAGTGATGATAATATGAATATGTTTGTATCTAATAAGTTTTCTGGCTCATTTTCAGGTTGTTGGAAGTGTCACATACGAGCATTTGCTGTCATGAGGTTCTGGTTTTCTAACAAAACCATTTTTTAGTGAGTTATGAAATGGTAGTGTGTTTGTTTGAACCCTTTCCCTATGTATATATTCTCCCCAACACTAGATAAAAATATCTTTGTATAGACAAAACTTTGTTTTAGACTAATTTTTTTAGTCCCAGGAACAATTGTGGAGAGTAACTGCATTATTGTTGAAGTATTGGCTTTGACCCATGTATCACAAATTACAGTATTTTTTCCTTGTTTATTTTTTCTTTTTCTTTTATTTGATTTTGATACACACATGTATTACGATGTCTCCAAAAAAAAAAAAAGTTGATTGGTTCCCAC

mRNA sequence

ATGGATGAGTCTTCGCTGCAGCTCATCCACGACGTCGGGACTAAATTGTGCAAACAGTCTCGCCCAACTAAGGATTACATCGTCAAATCCCTCCGGTCTGATCGCTCGCATTGTCGTCGGGGTGTTCTTCGCTGCTTACTGTCGACTGAGCAAGTTGATAATGGTCCTGTTTTCGTGGCTAATCTCCTGCTAGTGAAGAATGTGCGTAGTTCGTTCCAGTTGGTTGAACTTGGACCTTCCGGCACTAATAGCTCGTTCTCTCCATCTCAAGTTGTAGACGCTTTTGCATGTTTGGAACAGCCTTACGTCCCAGATGCTACAAGGAAGTCAGAATCAACTAAAATATTAGAGAGTTCTATAAAGCCTCTAAGGAAATCTATAATTAATGGTCTTCTACGAAATAGAGATAAAGATGATGTTTTTATACTTCTTTTGAGTTCTTTTTCAGAGCTAGCGGATATGACAAGTCCACTTTTCTCTCGGAGGGTTAAAATACTAGAGACAGTGGCACGATGTAAATGCTGTGTGATAATGCTTGACGTTGGATGCAATGACTTGGTGTTGGAGATGTTTAATACATTTTTCTCTGCTTTGAGGGACTACCACGAGCCTAGTTTGGTTAACAACATTTTGTCAATAATGACCCATATTCTAAGTGAGGATGCTTCTCTACCACTAGTAGATGTGGTTTTGCATAATCTTCTAAAGGAAGAAAAGGTTGAACCTACCGTTGCTTCTCGCCTAGCAGTTTCCATCATTGAAACTTGTGCCGAGACACTTGAACCATTTATTTGTGGATTCTTAACACTGGGGAGTGAACTCAAAGAATTTTACCATGAAATTATTTTTAGAATTTTCCAATGTGTCCCTCAAATGTTTCTTCCTGTGATTCCAAACTTGACTCTTGAGCTTTTGAAGTACCGAGGACTTTTTATGGAGTTTTTGAAAAGGTTTTGCGACAAGTTTGCAGAAGTTAGAATTCATGCCATCCAATGTGCCAAAGATTGTTATATGGCCAATCCTGCTTGTTCAGAATCTTTGGAAGTTCTGGGTGCAGTCGAAGAACGATTATTAGACTTAGATGATAGAGTGAGAACACAAGCAATAATTGTTGTTTGTAATATTGTCCGATCAAACATCAAATTTGTTCCAGTGACACTAATATCTCAAGCTGCTGAAAGACTACGAGATAAGAGGGATTCATCTGTTCATGATACGGATCATCCCACTCCTATCTGTGTTGCAGATGCTAGTCTATGCAGAATTGCAGATGTAAATGTTGCAAAGGATACTGTTTTGTATTTGCACAGTATTTTTCGTGCCATTAAGAGGGTTGAGGATGCTGTGGATATCAAACATCACCTGTTGTTGGAAGTGTCACATACGAGCATTTGCTGTCATGAGGTTCTGGTTTTCTAA

Coding sequence (CDS)

ATGGATGAGTCTTCGCTGCAGCTCATCCACGACGTCGGGACTAAATTGTGCAAACAGTCTCGCCCAACTAAGGATTACATCGTCAAATCCCTCCGGTCTGATCGCTCGCATTGTCGTCGGGGTGTTCTTCGCTGCTTACTGTCGACTGAGCAAGTTGATAATGGTCCTGTTTTCGTGGCTAATCTCCTGCTAGTGAAGAATGTGCGTAGTTCGTTCCAGTTGGTTGAACTTGGACCTTCCGGCACTAATAGCTCGTTCTCTCCATCTCAAGTTGTAGACGCTTTTGCATGTTTGGAACAGCCTTACGTCCCAGATGCTACAAGGAAGTCAGAATCAACTAAAATATTAGAGAGTTCTATAAAGCCTCTAAGGAAATCTATAATTAATGGTCTTCTACGAAATAGAGATAAAGATGATGTTTTTATACTTCTTTTGAGTTCTTTTTCAGAGCTAGCGGATATGACAAGTCCACTTTTCTCTCGGAGGGTTAAAATACTAGAGACAGTGGCACGATGTAAATGCTGTGTGATAATGCTTGACGTTGGATGCAATGACTTGGTGTTGGAGATGTTTAATACATTTTTCTCTGCTTTGAGGGACTACCACGAGCCTAGTTTGGTTAACAACATTTTGTCAATAATGACCCATATTCTAAGTGAGGATGCTTCTCTACCACTAGTAGATGTGGTTTTGCATAATCTTCTAAAGGAAGAAAAGGTTGAACCTACCGTTGCTTCTCGCCTAGCAGTTTCCATCATTGAAACTTGTGCCGAGACACTTGAACCATTTATTTGTGGATTCTTAACACTGGGGAGTGAACTCAAAGAATTTTACCATGAAATTATTTTTAGAATTTTCCAATGTGTCCCTCAAATGTTTCTTCCTGTGATTCCAAACTTGACTCTTGAGCTTTTGAAGTACCGAGGACTTTTTATGGAGTTTTTGAAAAGGTTTTGCGACAAGTTTGCAGAAGTTAGAATTCATGCCATCCAATGTGCCAAAGATTGTTATATGGCCAATCCTGCTTGTTCAGAATCTTTGGAAGTTCTGGGTGCAGTCGAAGAACGATTATTAGACTTAGATGATAGAGTGAGAACACAAGCAATAATTGTTGTTTGTAATATTGTCCGATCAAACATCAAATTTGTTCCAGTGACACTAATATCTCAAGCTGCTGAAAGACTACGAGATAAGAGGGATTCATCTGTTCATGATACGGATCATCCCACTCCTATCTGTGTTGCAGATGCTAGTCTATGCAGAATTGCAGATGTAAATGTTGCAAAGGATACTGTTTTGTATTTGCACAGTATTTTTCGTGCCATTAAGAGGGTTGAGGATGCTGTGGATATCAAACATCACCTGTTGTTGGAAGTGTCACATACGAGCATTTGCTGTCATGAGGTTCTGGTTTTCTAA

Protein sequence

MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVANLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSIKPLRKSIINGLLRNRDKDDVFILLLSSFSELADMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILSIMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLTLGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELLKYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERLLDLDDRVRTQAIIVVCNIVRSNIKFVPVTLISQAAERLRDKRDSSVHDTDHPTPICVADASLCRIADVNVAKDTVLYLHSIFRAIKRVEDAVDIKHHLLLEVSHTSICCHEVLVF

Homology

[Close]

BLAST of Spg016521 vs. NCBI nr
Match: XP_023536017.1 (sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Cucurbita pepo subsp. pepo] >XP_023536018.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.5 bits (1386), Expect = 5.8e-149
Identity = 311/464 (67.03%), Postives = 322/464 (69.40%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAAKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PLRKSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLRKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEIIFRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIIFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKLIGRLLS 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. NCBI nr
Match: XP_023536017.1 (sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Cucurbita pepo subsp. pepo] >XP_023536018.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 52.8 bits (125), Expect = 9.6e-03
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKR+EDAVD
Sbjct: 981  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRIEDAVD 1040

HSP 2 Score: 538.5 bits (1386), Expect = 5.8e-149
Identity = 311/464 (67.03%), Postives = 322/464 (69.40%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAAKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PLRKSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLRKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEIIFRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIIFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKLIGRLLS 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. NCBI nr
Match: XP_023536012.1 (sister chromatid cohesion protein PDS5 homolog A-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023536013.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 52.8 bits (125), Expect = 9.6e-03
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKR+EDAVD
Sbjct: 981  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRIEDAVD 1040

HSP 2 Score: 538.5 bits (1386), Expect = 5.8e-149
Identity = 311/464 (67.03%), Postives = 322/464 (69.40%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAAKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PLRKSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLRKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEIIFRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIIFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKLIGRLLS 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. NCBI nr
Match: XP_023536014.1 (sister chromatid cohesion protein PDS5 homolog A-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 52.8 bits (125), Expect = 9.6e-03
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKR+EDAVD
Sbjct: 971  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRIEDAVD 1030

HSP 2 Score: 538.5 bits (1386), Expect = 5.8e-149
Identity = 311/464 (67.03%), Postives = 322/464 (69.40%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAAKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PLRKSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLRKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEIIFRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIIFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKLIGRLLS 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. NCBI nr
Match: XP_023536015.1 (sister chromatid cohesion protein PDS5 homolog A-like isoform X4 [Cucurbita pepo subsp. pepo] >XP_023536016.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 52.8 bits (125), Expect = 9.6e-03
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKR+EDAVD
Sbjct: 981  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRIEDAVD 1040

HSP 2 Score: 538.5 bits (1386), Expect = 5.8e-149
Identity = 311/464 (67.03%), Postives = 322/464 (69.40%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAAKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PLRKSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLRKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEIIFRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIIFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKLIGRLLS 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. ExPASy TrEMBL
Match: A0A6J1IK50 (sister chromatid cohesion protein PDS5 homolog A-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111477004 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 8.2e-149
Identity = 310/464 (66.81%), Postives = 321/464 (69.18%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAPKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PL KSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLMKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEI+FRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIVFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKIIGRLLA 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. ExPASy TrEMBL
Match: A0A6J1IK50 (sister chromatid cohesion protein PDS5 homolog A-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111477004 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-03
Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKRVEDAVD
Sbjct: 981  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRVEDAVD 1040

HSP 2 Score: 537.0 bits (1382), Expect = 8.2e-149
Identity = 310/464 (66.81%), Postives = 321/464 (69.18%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAPKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PL KSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLMKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEI+FRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIVFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKIIGRLLA 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. ExPASy TrEMBL
Match: A0A6J1IHJ2 (sister chromatid cohesion protein PDS5 homolog A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477004 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-03
Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKRVEDAVD
Sbjct: 981  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRVEDAVD 1040

HSP 2 Score: 537.0 bits (1382), Expect = 8.2e-149
Identity = 310/464 (66.81%), Postives = 321/464 (69.18%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAPKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PL KSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLMKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEI+FRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIVFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKIIGRLLA 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. ExPASy TrEMBL
Match: A0A6J1IMW1 (sister chromatid cohesion protein PDS5 homolog A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477004 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-03
Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKRVEDAVD
Sbjct: 981  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRVEDAVD 1040

HSP 2 Score: 537.0 bits (1382), Expect = 8.2e-149
Identity = 310/464 (66.81%), Postives = 321/464 (69.18%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAPKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PL KSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLMKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRDYHEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEI+FRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIVFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKIIGRLLA 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. ExPASy TrEMBL
Match: A0A6J1IGF7 (sister chromatid cohesion protein PDS5 homolog A-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111477004 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-03
Identity = 35/73 (47.95%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 404  HDTDHPTPICVAD---ASLCR----------IADVNVAKDTVLYLHSIFRAIKRVEDAVD 460
            HD+D P   C  +   A  C            ADVN +K+TVLYLHSIFRAIKRVEDAVD
Sbjct: 981  HDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKETVLYLHSIFRAIKRVEDAVD 1040

HSP 2 Score: 537.0 bits (1382), Expect = 8.2e-149
Identity = 311/464 (67.03%), Postives = 322/464 (69.40%), Query Frame = 0


Query: 1   MDESSLQLIHDVGTKLCKQSRPTKDYIVKSLRSDRSHCRRGVLRCLLSTEQVDNGPVFVA 60
           MD+SSLQLIHDVGTKL KQSRPTKD+IVKSLR                            
Sbjct: 1   MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLR---------------------------- 60

Query: 61  NLLLVKNVRSSFQLVELGPSGTNSSFSPSQVVDAFACLEQPYVPDATRKSESTKILESSI 120
                                        QVVDAFACLEQ YVPDA+ KSE+ K +ESSI
Sbjct: 61  -----------------------------QVVDAFACLEQSYVPDASGKSEAAKKMESSI 120

Query: 121 KPLRKSIINGLLRNRDKD----------------------------DVFILLLSSFSELA 180
            PLRKSIINGLLRNRDKD                            DVFILLLSSFSELA
Sbjct: 121 NPLRKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFSELA 180

Query: 181 DMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNILS 240
           D TSPLFS RVKILETVARCKCCVIMLD+GCNDLVLEMFNTFFS LRD+HEPSLVNNILS
Sbjct: 181 DTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDHHEPSLVNNILS 240

Query: 241 IMTHILSEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--- 300
           IMTHILSEDASLPLVDVVLHNL+KEEK EPT ASRLAVSIIETCAETLEPFICGFLT   
Sbjct: 241 IMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLTSCI 300

Query: 301 -----LGSELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL------------------- 360
                +GSELKEFYHEIIFRIFQCVPQM LPVIPNL LEL+                   
Sbjct: 301 SERDVVGSELKEFYHEIIFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKIIGRLLA 360

Query: 361 --------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVEERL 402
                   KYRGLFMEFLKRFCDK AEVRIHAIQCAKDCY ANPA SESLEVL AVEERL
Sbjct: 361 LPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVEERL 407

[Close]

BLAST of Spg016521 vs. TAIR 10
Match: AT1G77600.1 (ARM repeat superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 7.7e-75
Identity = 167/387 (43.15%), Postives = 227/387 (58.66%), Query Frame = 0


Query: 104 PDATRKSESTKILESSIKPLRKSII-NGLLRNRDKD------------------------ 163
           P AT K +  K++E+ ++PL+KSII + LL+NRD D                        
Sbjct: 44  PSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLVTVCVSELFRILAPHLPFED 103

Query: 164 ----DVFILLLSSFSELADMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTF 223
               D+F L ++ FSEL+D  SP FS+R KILETV+R K C++MLD  C DLV EMFN F
Sbjct: 104 EYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDCQDLVHEMFNMF 163

Query: 224 FSALRDYHEPSLV----------------------NNILSIMTHILSEDASLPLVDVVLH 283
           FS +R++H+ SL+                      NNIL+IM+ +L E+A+   V V+L 
Sbjct: 164 FSLVREHHQQSLINQKSMKTQQRKANTQQTQHSLFNNILAIMSDVLEEEANSSFVVVILE 223

Query: 284 NLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--------LGSELKEFYHEIIFR 343
           NL+KE +   + A +LA S+IE CA+ LEP IC FLT        + + LK+ YHEIIF+
Sbjct: 224 NLVKEGEDTTSGADKLASSLIERCADRLEPLICSFLTSCFMEKDSIQTNLKDSYHEIIFK 283

Query: 344 IFQCVPQMFLPVIPNLTLELL------------------------------KYRGLFMEF 402
           I    PQM L VIP LT ELL                               Y+ L+ EF
Sbjct: 284 ISLIAPQMLLAVIPKLTQELLTDQVDVRIKALNLAGRIFAQPKHCLSSYVETYQDLYAEF 343

[Close]

BLAST of Spg016521 vs. TAIR 10
Match: AT1G77600.2 (ARM repeat superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 7.7e-75
Identity = 167/387 (43.15%), Postives = 227/387 (58.66%), Query Frame = 0


Query: 104 PDATRKSESTKILESSIKPLRKSII-NGLLRNRDKD------------------------ 163
           P AT K +  K++E+ ++PL+KSII + LL+NRD D                        
Sbjct: 44  PSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLVTVCVSELFRILAPHLPFED 103

Query: 164 ----DVFILLLSSFSELADMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTF 223
               D+F L ++ FSEL+D  SP FS+R KILETV+R K C++MLD  C DLV EMFN F
Sbjct: 104 EYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDCQDLVHEMFNMF 163

Query: 224 FSALRDYHEPSLV----------------------NNILSIMTHILSEDASLPLVDVVLH 283
           FS +R++H+ SL+                      NNIL+IM+ +L E+A+   V V+L 
Sbjct: 164 FSLVREHHQQSLINQKSMKTQQRKANTQQTQHSLFNNILAIMSDVLEEEANSSFVVVILE 223

Query: 284 NLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--------LGSELKEFYHEIIFR 343
           NL+KE +   + A +LA S+IE CA+ LEP IC FLT        + + LK+ YHEIIF+
Sbjct: 224 NLVKEGEDTTSGADKLASSLIERCADRLEPLICSFLTSCFMEKDSIQTNLKDSYHEIIFK 283

Query: 344 IFQCVPQMFLPVIPNLTLELL------------------------------KYRGLFMEF 402
           I    PQM L VIP LT ELL                               Y+ L+ EF
Sbjct: 284 ISLIAPQMLLAVIPKLTQELLTDQVDVRIKALNLAGRIFAQPKHCLSSYVETYQDLYAEF 343

[Close]

BLAST of Spg016521 vs. TAIR 10
Match: AT1G77600.3 (ARM repeat superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 7.7e-75
Identity = 167/387 (43.15%), Postives = 227/387 (58.66%), Query Frame = 0


Query: 104 PDATRKSESTKILESSIKPLRKSII-NGLLRNRDKD------------------------ 163
           P AT K +  K++E+ ++PL+KSII + LL+NRD D                        
Sbjct: 44  PSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLVTVCVSELFRILAPHLPFED 103

Query: 164 ----DVFILLLSSFSELADMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTF 223
               D+F L ++ FSEL+D  SP FS+R KILETV+R K C++MLD  C DLV EMFN F
Sbjct: 104 EYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDCQDLVHEMFNMF 163

Query: 224 FSALRDYHEPSLV----------------------NNILSIMTHILSEDASLPLVDVVLH 283
           FS +R++H+ SL+                      NNIL+IM+ +L E+A+   V V+L 
Sbjct: 164 FSLVREHHQQSLINQKSMKTQQRKANTQQTQHSLFNNILAIMSDVLEEEANSSFVVVILE 223

Query: 284 NLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFLT--------LGSELKEFYHEIIFR 343
           NL+KE +   + A +LA S+IE CA+ LEP IC FLT        + + LK+ YHEIIF+
Sbjct: 224 NLVKEGEDTTSGADKLASSLIERCADRLEPLICSFLTSCFMEKDSIQTNLKDSYHEIIFK 283

Query: 344 IFQCVPQMFLPVIPNLTLELL------------------------------KYRGLFMEF 402
           I    PQM L VIP LT ELL                               Y+ L+ EF
Sbjct: 284 ISLIAPQMLLAVIPKLTQELLTDQVDVRIKALNLAGRIFAQPKHCLSSYVETYQDLYAEF 343

[Close]

BLAST of Spg016521 vs. TAIR 10
Match: AT5G47690.1 (binding )

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-42
Identity = 115/344 (33.43%), Postives = 181/344 (52.62%), Query Frame = 0


Query: 100 QPYVPDATRKSESTKILESSIKPLRKSIINGLLR---------NRDKDDVFILLLSSFSE 159
           QP++ DA  K E     +  +K L  S ++ + R         +    D+F L++S+F+ 
Sbjct: 53  QPFL-DAVIKPEILNHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAG 112

Query: 160 LADMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNI 219
           L D++ P F RRV ILETVA+ + CV+MLD+ C+DLV E+F TF    RD H   + +++
Sbjct: 113 LNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSM 172

Query: 220 LSIMTHIL--SEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFL 279
            +IM  +L  SED    L+ ++L  L +        A RLA+ +IE CA  +E  I  FL
Sbjct: 173 QNIMIVLLEESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFL 232

Query: 280 TLG-------SELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL---------------- 339
                     S  +  YHE+I+ +++C PQ    V P LT ELL                
Sbjct: 233 ISSMSGDSRFSSSQIDYHEVIYDLYRCAPQALSGVAPYLTGELLADKLETRLKVVGLVGE 292

Query: 340 -----------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVE 399
                      ++  +F+EFLKR  D+  EVR+  +   KDC +++P  +E+ +++ A+ 
Sbjct: 293 LFSLPGRVISEEFDSIFLEFLKRLTDRVVEVRMAILDHIKDCLLSDPLRAEASQIISALC 352

[Close]

BLAST of Spg016521 vs. TAIR 10
Match: AT5G47690.2 (binding )

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-42
Identity = 115/344 (33.43%), Postives = 181/344 (52.62%), Query Frame = 0


Query: 100 QPYVPDATRKSESTKILESSIKPLRKSIINGLLR---------NRDKDDVFILLLSSFSE 159
           QP++ DA  K E     +  +K L  S ++ + R         +    D+F L++S+F+ 
Sbjct: 53  QPFL-DAVIKPEILNHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAG 112

Query: 160 LADMTSPLFSRRVKILETVARCKCCVIMLDVGCNDLVLEMFNTFFSALRDYHEPSLVNNI 219
           L D++ P F RRV ILETVA+ + CV+MLD+ C+DLV E+F TF    RD H   + +++
Sbjct: 113 LNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSM 172

Query: 220 LSIMTHIL--SEDASLPLVDVVLHNLLKEEKVEPTVASRLAVSIIETCAETLEPFICGFL 279
            +IM  +L  SED    L+ ++L  L +        A RLA+ +IE CA  +E  I  FL
Sbjct: 173 QNIMIVLLEESEDVQEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFL 232

Query: 280 TLG-------SELKEFYHEIIFRIFQCVPQMFLPVIPNLTLELL---------------- 339
                     S  +  YHE+I+ +++C PQ    V P LT ELL                
Sbjct: 233 ISSMSGDSRFSSSQIDYHEVIYDLYRCAPQALSGVAPYLTGELLADKLETRLKVVGLVGE 292

Query: 340 -----------KYRGLFMEFLKRFCDKFAEVRIHAIQCAKDCYMANPACSESLEVLGAVE 399
                      ++  +F+EFLKR  D+  EVR+  +   KDC +++P  +E+ +++ A+ 
Sbjct: 293 LFSLPGRVISEEFDSIFLEFLKRLTDRVVEVRMAILDHIKDCLLSDPLRAEASQIISALC 352

The following BLAST results are available for this feature:

BLAST of Spg016521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536017.1	5.8e-149	67.03	sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Cucurbita pepo...	[more]
XP_023536017.1	9.6e-03	46.58	sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Cucurbita pepo...	[more]
XP_023536012.1	9.6e-03	46.58	sister chromatid cohesion protein PDS5 homolog A-like isoform X2 [Cucurbita pepo...	[more]
XP_023536014.1	9.6e-03	46.58	sister chromatid cohesion protein PDS5 homolog A-like isoform X3 [Cucurbita pepo...	[more]
XP_023536015.1	9.6e-03	46.58	sister chromatid cohesion protein PDS5 homolog A-like isoform X4 [Cucurbita pepo...	[more]

Pages

BLAST of Spg016521 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg016521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IK50	8.2e-149	66.81	sister chromatid cohesion protein PDS5 homolog A-like isoform X4 OS=Cucurbita ma...	[more]
A0A6J1IK50	3.6e-03	47.95	sister chromatid cohesion protein PDS5 homolog A-like isoform X4 OS=Cucurbita ma...	[more]
A0A6J1IHJ2	3.6e-03	47.95	sister chromatid cohesion protein PDS5 homolog A-like isoform X2 OS=Cucurbita ma...	[more]
A0A6J1IMW1	3.6e-03	47.95	sister chromatid cohesion protein PDS5 homolog A-like isoform X1 OS=Cucurbita ma...	[more]
A0A6J1IGF7	3.6e-03	47.95	sister chromatid cohesion protein PDS5 homolog A-like isoform X5 OS=Cucurbita ma...	[more]

Pages

BLAST of Spg016521 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77600.1	7.7e-75	43.15	ARM repeat superfamily protein	[more]
AT1G77600.2	7.7e-75	43.15	ARM repeat superfamily protein	[more]
AT1G77600.3	7.7e-75	43.15	ARM repeat superfamily protein	[more]
AT5G47690.1	2.3e-42	33.43	binding	[more]
AT5G47690.2	2.3e-42	33.43	binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039776	Sister chromatid cohesion protein Pds5	PANTHER	PTHR12663	ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED	coord: 137..306
IPR039776	Sister chromatid cohesion protein Pds5	PANTHER	PTHR12663	ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED	coord: 306..399
None	No IPR available	PANTHER	PTHR12663:SF0	PRECOCIOUS DISSOCIATION OF SISTERS 5, ISOFORM A	coord: 306..399
None	No IPR available	PANTHER	PTHR12663:SF0	PRECOCIOUS DISSOCIATION OF SISTERS 5, ISOFORM A	coord: 137..306
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 24..395

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016521.1	Spg016521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007064	mitotic sister chromatid cohesion