Spg016455 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGTATTTTTTTCATTTCGGATTTACTCACACAAAAAACAAATTCCAAACCAAATTCTCCCTCAAAACTCTTAAAATATCCCTTTCTCTGTAAAGTTCACAGAGACCCCCCTTATCCCCTTCTCTCTTTCCCTCTCTCTCTTTCTACCAGAAAAGTCAGTACCAATCAGCCAACCGCCGCCGGTTAATGACAACGAGCCCTAATCCTTTGGCGTCGCCGGCGAGGAGAAGCACAGCGGAGGAAGGTCGGAAGCCCGCCCCGTCACCACTGCGACGGAATCGATCTTCCGCCAGTGACTGATGGAGGTTTTGTTCGGTCCTCCAACGTTCAGCATCGAAGTTCAGCCGCCCACGGCGTTCTCCGGCGTCTCTCTCCCGCCGGAGAATCCCGACGCCGCGGCGGAGACTAAGAATCAGGCCGGGTCGGGTTTTCGCGAGGCCGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGAGTTCCCGACGACGATTCCGACGAAGACGGCGGCGGCGATGAGGTGCAGAGCAAGCCAAAGGAAGGTGGATTATGCGGATTGGATTCTCTGGAAGACGCTCTTCCAATCAAGTGAGTCTCTCTATCCCTCTCTCTTAAATCTTCCCTCTCTTACAACCTAGAAACCGAAAATCGAAGGCTAATTAGCGATTGAACTCGAAAATTTTCCGATTAAACAAACAATTTCCGTCTCGAATTAGCGTTTCCAACTCTGTTATGTAACGAAACTTCCCGGGGGGGAAATTGGAACTGCAGAAGGGGATTATCGAGCCATTTCTCGGGGAAATCGAAGTCGTTCGCGAATTTATCAGAGGTGATTCAAGTGAAGGATTTAGAGAAGCCGGAGAATCCTTTCAACAAGAGAAGAAGGATTCTAATGGCGTCGAAATGGTCGAGAAAAGCTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGCTGGCCCTGAACGAAGACGAAGAAGAAGAAGAAGAAGAAAAAGCAGCGGCGGAGGGCTCCGATTCAGAGGACAGAGATCGAGACAGCGATGAAGAAAATGAAGAGAACGAACGAAGAAGACGAACCCTAGGGCAAAGATTCCACGATCGGAAGCTCGTTAATGGCTTCAAATCAAAGAGCTGTTTTGATCTGCAGGAATACGAACAGCAATGA ATGGAGGTTTTGTTCGGTCCTCCAACGTTCAGCATCGAAGTTCAGCCGCCCACGGCGTTCTCCGGCGTCTCTCTCCCGCCGGAGAATCCCGACGCCGCGGCGGAGACTAAGAATCAGGCCGGGTCGGGTTTTCGCGAGGCCGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGAGTTCCCGACGACGATTCCGACGAAGACGGCGGCGGCGATGAGGTGCAGAGCAAGCCAAAGGAAGGTGGATTATGCGGATTGGATTCTCTGGAAGACGCTCTTCCAATCAAAAGGGGATTATCGAGCCATTTCTCGGGGAAATCGAAGTCGTTCGCGAATTTATCAGAGGTGATTCAAGTGAAGGATTTAGAGAAGCCGGAGAATCCTTTCAACAAGAGAAGAAGGATTCTAATGGCGTCGAAATGGTCGAGAAAAGCTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGCTGGCCCTGAACGAAGACGAAGAAGAAGAAGAAGAAGAAAAAGCAGCGGCGGAGGGCTCCGATTCAGAGGACAGAGATCGAGACAGCGATGAAGAAAATGAAGAGAACGAACGAAGAAGACGAACCCTAGGGCAAAGATTCCACGATCGGAAGCTCGTTAATGGCTTCAAATCAAAGAGCTGTTTTGATCTGCAGGAATACGAACAGCAATGA ATGGAGGTTTTGTTCGGTCCTCCAACGTTCAGCATCGAAGTTCAGCCGCCCACGGCGTTCTCCGGCGTCTCTCTCCCGCCGGAGAATCCCGACGCCGCGGCGGAGACTAAGAATCAGGCCGGGTCGGGTTTTCGCGAGGCCGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGAGTTCCCGACGACGATTCCGACGAAGACGGCGGCGGCGATGAGGTGCAGAGCAAGCCAAAGGAAGGTGGATTATGCGGATTGGATTCTCTGGAAGACGCTCTTCCAATCAAAAGGGGATTATCGAGCCATTTCTCGGGGAAATCGAAGTCGTTCGCGAATTTATCAGAGGTGATTCAAGTGAAGGATTTAGAGAAGCCGGAGAATCCTTTCAACAAGAGAAGAAGGATTCTAATGGCGTCGAAATGGTCGAGAAAAGCTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGCTGGCCCTGAACGAAGACGAAGAAGAAGAAGAAGAAGAAAAAGCAGCGGCGGAGGGCTCCGATTCAGAGGACAGAGATCGAGACAGCGATGAAGAAAATGAAGAGAACGAACGAAGAAGACGAACCCTAGGGCAAAGATTCCACGATCGGAAGCTCGTTAATGGCTTCAAATCAAAGAGCTGTTTTGATCTGCAGGAATACGAACAGCAATGA MEVLFGPPTFSIEVQPPTAFSGVSLPPENPDAAAETKNQAGSGFREAGSGSSIGENSSESSSSIGVPDDDSDEDGGGDEVQSKPKEGGLCGLDSLEDALPIKRGLSSHFSGKSKSFANLSEVIQVKDLEKPENPFNKRRRILMASKWSRKASFYNWPNPKSMPLLALNEDEEEEEEEKAAAEGSDSEDRDRDSDEENEENERRRRTLGQRFHDRKLVNGFKSKSCFDLQEYEQQ Homology
BLAST of Spg016455 vs. NCBI nr
Match: XP_038898503.1 (uncharacterized protein LOC120086121 [Benincasa hispida]) HSP 1 Score: 358.6 bits (919), Expect = 4.1e-95 Identity = 200/234 (85.47%), Postives = 215/234 (91.88%), Query Frame = 0
BLAST of Spg016455 vs. NCBI nr
Match: XP_022937406.1 (uncharacterized protein LOC111443706 [Cucurbita moschata] >XP_023535797.1 uncharacterized protein LOC111797124 [Cucurbita pepo subsp. pepo] >KAG6591629.1 hypothetical protein SDJN03_13975, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 343.2 bits (879), Expect = 1.8e-90 Identity = 192/232 (82.76%), Postives = 205/232 (88.36%), Query Frame = 0
BLAST of Spg016455 vs. NCBI nr
Match: XP_022975769.1 (uncharacterized protein LOC111476326 [Cucurbita maxima]) HSP 1 Score: 342.4 bits (877), Expect = 3.0e-90 Identity = 191/235 (81.28%), Postives = 206/235 (87.66%), Query Frame = 0
BLAST of Spg016455 vs. NCBI nr
Match: XP_022137206.1 (transcription initiation factor TFIID subunit 7-like [Momordica charantia]) HSP 1 Score: 332.4 bits (851), Expect = 3.1e-87 Identity = 191/244 (78.28%), Postives = 205/244 (84.02%), Query Frame = 0
BLAST of Spg016455 vs. NCBI nr
Match: XP_008466301.1 (PREDICTED: uncharacterized protein LOC103503753 [Cucumis melo]) HSP 1 Score: 331.3 bits (848), Expect = 7.0e-87 Identity = 189/235 (80.43%), Postives = 203/235 (86.38%), Query Frame = 0
BLAST of Spg016455 vs. ExPASy TrEMBL
Match: A0A6J1FA94 (uncharacterized protein LOC111443706 OS=Cucurbita moschata OX=3662 GN=LOC111443706 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 8.6e-91 Identity = 192/232 (82.76%), Postives = 205/232 (88.36%), Query Frame = 0
BLAST of Spg016455 vs. ExPASy TrEMBL
Match: A0A6J1ILJ2 (uncharacterized protein LOC111476326 OS=Cucurbita maxima OX=3661 GN=LOC111476326 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.5e-90 Identity = 191/235 (81.28%), Postives = 206/235 (87.66%), Query Frame = 0
BLAST of Spg016455 vs. ExPASy TrEMBL
Match: A0A6J1C5V2 (transcription initiation factor TFIID subunit 7-like OS=Momordica charantia OX=3673 GN=LOC111008707 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.5e-87 Identity = 191/244 (78.28%), Postives = 205/244 (84.02%), Query Frame = 0
BLAST of Spg016455 vs. ExPASy TrEMBL
Match: A0A1S3CQX1 (uncharacterized protein LOC103503753 OS=Cucumis melo OX=3656 GN=LOC103503753 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 3.4e-87 Identity = 189/235 (80.43%), Postives = 203/235 (86.38%), Query Frame = 0
BLAST of Spg016455 vs. ExPASy TrEMBL
Match: A0A0A0LEH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881860 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.7e-84 Identity = 187/236 (79.24%), Postives = 199/236 (84.32%), Query Frame = 0
BLAST of Spg016455 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26 Identity = 96/236 (40.68%), Postives = 136/236 (57.63%), Query Frame = 0
BLAST of Spg016455 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 106.3 bits (264), Expect = 3.4e-23 Identity = 85/212 (40.09%), Postives = 122/212 (57.55%), Query Frame = 0
BLAST of Spg016455 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 5.1e-19 Identity = 73/180 (40.56%), Postives = 103/180 (57.22%), Query Frame = 0
BLAST of Spg016455 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 7.8e-12 Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 0
BLAST of Spg016455 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 52/133 (39.10%), Postives = 79/133 (59.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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