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Spg016448 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACCGCCGATCAGAAAAGCGCAATATGCTCTCTGTAATGACTTCAAACAACCACTGGATTCTATCCCTCAAGCTCCTACTTCTCTCCTCCGCCGCTCTATCCATGGCGGTGATGCTCAAATTCTCCGTTCCGGTGTTCGCCGACATCCTCGTCTCCGACGTTCCCGCCGTTTGGAGCTCCATCATTTTCTGGTTTAGGCCTCCTTACGTTTACTTGTTCGTCAATTTCATCATTATCAGTATTCTCGCCTCTTCCAAGCTCCATCAGGACCTAGTCGATCCTCCGCCGGCGAAGCTATCCGCTGATTCACGAGCAGATTACGCAGTTCGTAGAGTCGTCTGCGACGTTCTCGACAAGAGCGATCGCCATGCGAACGAAGACTTCACGGCGGATGTTTCGAAAAATGATGTGAAATCGGATGCGAAATCGGAGTACTCCACGGTTTCAGAGAGAGAAAACGATGAAAACGGCGAGGCAGATCGGAGCGGATTGCAAAAAGATGATTCGATGGAGATTGTATTGCAGAAATACGATAAGAAGCCGCCGATTTCTTCGAAGGTCGGTAATCGAAAAGTTGCAAAAGCTGCTAATACTACTCGCGCAGGTGCTACTCGTTAG ATGAACCGCCGATCAGAAAAGCGCAATATGCTCTCTGTAATGACTTCAAACAACCACTGGATTCTATCCCTCAAGCTCCTACTTCTCTCCTCCGCCGCTCTATCCATGGCGGTGATGCTCAAATTCTCCGTTCCGGTGTTCGCCGACATCCTCGTCTCCGACGTTCCCGCCGTTTGGAGCTCCATCATTTTCTGGTTTAGGCCTCCTTACGTTTACTTGTTCGTCAATTTCATCATTATCAGTATTCTCGCCTCTTCCAAGCTCCATCAGGACCTAGTCGATCCTCCGCCGGCGAAGCTATCCGCTGATTCACGAGCAGATTACGCAGTTCGTAGAGTCGTCTGCGACGTTCTCGACAAGAGCGATCGCCATGCGAACGAAGACTTCACGGCGGATGTTTCGAAAAATGATGTGAAATCGGATGCGAAATCGGAGTACTCCACGGTTTCAGAGAGAGAAAACGATGAAAACGGCGAGGCAGATCGGAGCGGATTGCAAAAAGATGATTCGATGGAGATTGTATTGCAGAAATACGATAAGAAGCCGCCGATTTCTTCGAAGGTCGGTAATCGAAAAGTTGCAAAAGCTGCTAATACTACTCGCGCAGGTGCTACTCGTTAG ATGAACCGCCGATCAGAAAAGCGCAATATGCTCTCTGTAATGACTTCAAACAACCACTGGATTCTATCCCTCAAGCTCCTACTTCTCTCCTCCGCCGCTCTATCCATGGCGGTGATGCTCAAATTCTCCGTTCCGGTGTTCGCCGACATCCTCGTCTCCGACGTTCCCGCCGTTTGGAGCTCCATCATTTTCTGGTTTAGGCCTCCTTACGTTTACTTGTTCGTCAATTTCATCATTATCAGTATTCTCGCCTCTTCCAAGCTCCATCAGGACCTAGTCGATCCTCCGCCGGCGAAGCTATCCGCTGATTCACGAGCAGATTACGCAGTTCGTAGAGTCGTCTGCGACGTTCTCGACAAGAGCGATCGCCATGCGAACGAAGACTTCACGGCGGATGTTTCGAAAAATGATGTGAAATCGGATGCGAAATCGGAGTACTCCACGGTTTCAGAGAGAGAAAACGATGAAAACGGCGAGGCAGATCGGAGCGGATTGCAAAAAGATGATTCGATGGAGATTGTATTGCAGAAATACGATAAGAAGCCGCCGATTTCTTCGAAGGTCGGTAATCGAAAAGTTGCAAAAGCTGCTAATACTACTCGCGCAGGTGCTACTCGTTAG MNRRSEKRNMLSVMTSNNHWILSLKLLLLSSAALSMAVMLKFSVPVFADILVSDVPAVWSSIIFWFRPPYVYLFVNFIIISILASSKLHQDLVDPPPAKLSADSRADYAVRRVVCDVLDKSDRHANEDFTADVSKNDVKSDAKSEYSTVSERENDENGEADRSGLQKDDSMEIVLQKYDKKPPISSKVGNRKVAKAANTTRAGATR Homology
BLAST of Spg016448 vs. NCBI nr
Match: XP_023535113.1 (uncharacterized protein LOC111796630 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60 Identity = 143/199 (71.86%), Postives = 163/199 (81.91%), Query Frame = 0
BLAST of Spg016448 vs. NCBI nr
Match: KAG6591991.1 (hypothetical protein SDJN03_14337, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024866.1 hypothetical protein SDJN02_13685 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 235.0 bits (598), Expect = 6.0e-58 Identity = 140/199 (70.35%), Postives = 160/199 (80.40%), Query Frame = 0
BLAST of Spg016448 vs. NCBI nr
Match: XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia]) HSP 1 Score: 228.0 bits (580), Expect = 7.3e-56 Identity = 136/196 (69.39%), Postives = 152/196 (77.55%), Query Frame = 0
BLAST of Spg016448 vs. NCBI nr
Match: XP_022975735.1 (uncharacterized protein LOC111475963 [Cucurbita maxima]) HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48 Identity = 119/176 (67.61%), Postives = 139/176 (78.98%), Query Frame = 0
BLAST of Spg016448 vs. NCBI nr
Match: XP_022936351.1 (uncharacterized protein LOC111442999 [Cucurbita moschata]) HSP 1 Score: 203.4 bits (516), Expect = 1.9e-48 Identity = 119/173 (68.79%), Postives = 137/173 (79.19%), Query Frame = 0
BLAST of Spg016448 vs. ExPASy TrEMBL
Match: A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 3.5e-56 Identity = 136/196 (69.39%), Postives = 152/196 (77.55%), Query Frame = 0
BLAST of Spg016448 vs. ExPASy TrEMBL
Match: A0A6J1IHJ9 (uncharacterized protein LOC111475963 OS=Cucurbita maxima OX=3661 GN=LOC111475963 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 5.5e-49 Identity = 119/176 (67.61%), Postives = 139/176 (78.98%), Query Frame = 0
BLAST of Spg016448 vs. ExPASy TrEMBL
Match: A0A6J1F789 (uncharacterized protein LOC111442999 OS=Cucurbita moschata OX=3662 GN=LOC111442999 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 9.3e-49 Identity = 119/173 (68.79%), Postives = 137/173 (79.19%), Query Frame = 0
BLAST of Spg016448 vs. ExPASy TrEMBL
Match: A0A6J1ITI6 (uncharacterized protein LOC111478509 OS=Cucurbita maxima OX=3661 GN=LOC111478509 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 8.2e-21 Identity = 85/212 (40.09%), Postives = 122/212 (57.55%), Query Frame = 0
BLAST of Spg016448 vs. ExPASy TrEMBL
Match: A0A0A0L2K5 (Fiber expressed protein OS=Cucumis sativus OX=3659 GN=Csa_3G099710 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.4e-20 Identity = 77/216 (35.65%), Postives = 120/216 (55.56%), Query Frame = 0
BLAST of Spg016448 vs. TAIR 10
Match: AT1G61260.1 (Protein of unknown function (DUF761) ) HSP 1 Score: 68.6 bits (166), Expect = 6.9e-12 Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Spg016448 vs. TAIR 10
Match: AT1G11220.1 (Protein of unknown function (DUF761) ) HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09 Identity = 48/188 (25.53%), Postives = 97/188 (51.60%), Query Frame = 0
BLAST of Spg016448 vs. TAIR 10
Match: AT5G54300.1 (Protein of unknown function (DUF761) ) HSP 1 Score: 42.7 bits (99), Expect = 4.1e-04 Identity = 56/194 (28.87%), Postives = 86/194 (44.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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