Spg016421 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016421
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed RNA polymerase subunit beta
Location	scaffold9: 43316765 .. 43319388 (-)
RNA-Seq Expression	Spg016421
Synteny	Spg016421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAAAACGCCAATCAATCATCAACCATCGATTTCATCAGAGAAGAAGAAGAAGAAGAAGGAAGGGAAGAGAAAGATTCTTCTCCGGTGGAAGAGGATGTCATGTTGTTCGTCGTTATCAGCGGCTCCTACATCCATGTCTCTGATCACCAAGCGCAAATTCACGAGTTCTGTCAATAAACCTGTGATCGTTTCCATGAATTCTCGCTTCAGAGCTTCTGCAGAAGTTCCCGATTTTCTTCCCGCGGATTGGTACGCACACGAACCTCGAGAATTCCGCTTTTCTCTGATTCACGAGTTGTTGCAGAGTATTATTGAATAGTAGAGTCTGATCTCGATAGGATTGGGGAAATGATTCTGTTCATGTTCGATTGCGAATTGACGTATCTGAGATTTTCAATTCATTTCGTGTTTTTATCGCAAGAATCTGGTGTGAGTGTGTTACTTATGACGTTGGAATTACCGAGTTCGAAAATTGAATGTTTGGCTTCTTTTCATCAGATTTCCTCTTTTGGCCAGGGGGCAAATTCCTTCTTCCTGTCTCGTTCATCGATGTTAAAGTTTATAGGAATGAACCTTTGCATAGAAATCAAATTCATTCTCCATAAGATTGTCCACGATTAGTTGATAGTTTTCCTGGTGTTGGAATTCATTTTCCTTCTCTATTCCGTCCTTTCTTCCTCGGGGCCAAACAGTTTGGTGAAAACTATGTGCCAGTTTGGTATGTTTAGGATGCAACACAGAGTCTGTTTATGAAATATACTATTTCATGTTGCAAACTCATTTCATTGTTGTTAAAACCAAAACATATACACATACTATAAATCAAATAGTATTGTAAAATAATAATGGTACAAAATTTGTTAACTTTGCTACCAAATTCATATTCGAATTGTTTTCAAATTTCTGTTTTTAGACCGCTCTAAATATTTTGGTCTCTTTGGCAGGCATGAGGCACACAAGAAGAATCCTTTAGGTCCAAGTTTACATGTAACTGTTCAACTATGCAAGTTAGTATTAAATGTTGTAATTCTTTATCTGTTAATAACTTTATCTTGAAACTTTCTATATAGTTCAATGCAGAAGAAGCTATTCAACACCAGCTAGATGCACTGAGATACAATGATCGGCCCCATCAAGATTATGGAATTGAAGTCATGTACCAGGTAGTGTGCGGTGTAAAGGGTCTTCATTTCTTCATATTGGTTGCTTATGTAATGACACGGTAGCTTTTAAATTGAATGCCTCTCTATATATATGACAGTTTGCTGGGTTTGATCCTCTTCGAAGGTCTACATATTTTGGTCCATTTTTTGATCTGGGACAGGTATCATTTGAAACTTCAACAATTTACACGAGCAACATTGTATCTGCTCATTCTTCTCTTGATTTGCAACATTTTGGACAGTGCAGTTTGAAAGATTCAGACGAGTATTCCACCATTCGACATATCGAGTGTTGCTTGGTCATAAAGAGAGAAAGATCTTGAGCAGTTTGTCTGTGGAGGAGGTACAGCAGGCTTCCTAATGAATTTGATTGATTCCTGAGCCTAGTAGTCAACTATTCTCGGATGTGATTAAGCTCTGCACTTTTCTCTACTTTCTGTTCCAGTAAATTTATCTACTGTAAAATAATATCCTGTGGATTTACAAATTCTGAAACAGAACCGATTCAAGCAGCGGGTATGGATACGAGGTTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGGTTAGACTATGTCGTTATGAATCGGTTGCAATCGTTGGTAGTCTGCAGCAAATCAAATGCTTATTTCATCGAACTCTATGATAAAGGAATTCTAATCATCATCGTCAGATTGATTATTATTCCCTCATCAAAGAACATCTCTGGAGAATTGAACACTTGAACCTGTAGATTGCCTTCCATTCCTCAACTGAATATGCTTGAATGATGAAGTGGGCTTCGAGCTAGTTGTCATTGTATGAGAATTAAAATTTCCTTAAAAACTAATGGGATGGGCCATGAGCTAATAGAGGGGTGGGGCTCTATACATAGTATTGTACCTATATTTATGACCATTGTTGAAAAGAGCCATACAGACATTCAGTGAGGATATGGACAGGCCAAAATACATGCTAGATAGCAGCCTTGTTTTAAGTTGAAAGTACTTGATGAGTTATAGATGTTCAGCCTTCAATAATTTCTGAAACTTGAGTGTTTATTGGCAGAGGGTTGGCGGCTCGTGGGATGGGTATTGGCTTACAGAAAGTTTACTTAACGATGGGGATGCATTTAGTGGAGGCTTAGCTTACTAAGGAAAAGGATGCTGTGCTCAAATTGGGTGGCTGGTTAGCAAACTTAGCATAACATTGCTCAATTTGTATATTTGAAATGTATATCAAAGAAAAAAAAATGTATATCATACGTCTGTATTAGTGTGTGAACCCTTGTAATTTGTGTAACTTAGAATTTGTATATATTATTTACATGGTTTCATTCTGCCCTTTGACAATCTCTCTCCCTCTCTCTTTTCCTCTCATGTTTATCGAGTTGGGTTGGTCGGGTTTTTAGAACGCCTCCTGATAAGATGCAGGCATGTACTAATTATTGGATATCGAAACAAACAAC

mRNA sequence

ATGTCATGTTGTTCGTCGTTATCAGCGGCTCCTACATCCATGTCTCTGATCACCAAGCGCAAATTCACGAGTTCTGTCAATAAACCTGTGATCGTTTCCATGAATTCTCGCTTCAGAGCTTCTGCAGAAGTTCCCGATTTTCTTCCCGCGGATTGGATTGGGGAAATGATTCTGTTCATGTTCGATTGCGAATTGACGTATCTGAGATTTTCAATTCATTTCGTGTTTTTATCGCAAGAATCTGGTGTGATTGATAGTTTTCCTGGTGTTGGAATTCATTTTCCTTCTCTATTCCGTCCTTTCTTCCTCGGGGCCAAACAGTTTGGTGAAAACTATGTGCCAGTTTGGCATGAGGCACACAAGAAGAATCCTTTAGGTCCAAGTTTACATTTCAATGCAGAAGAAGCTATTCAACACCAGCTAGATGCACTGAGATACAATGATCGGCCCCATCAAGATTATGGAATTGAAGTCATGTACCAGTTTGCTGGGTTTGATCCTCTTCGAAGGTCTACATATTTTGGTCCATTTTTTGATCTGGGACAGTTTGAAAGATTCAGACGAGTATTCCACCATTCGACATATCGAGTGTTGCTTGGTCATAAAGAGAGAAAGATCTTGAGCAGTTTGTCTGTGGAGGAGAACCGATTCAAGCAGCGGGTATGGATACGAGGTTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGCGGCTCGTGGGATGGGTATTGGCTTACAGAAAGTTTACTTAACGATGGGGATGCATTTAGTGGAGGCTTAGCTTACTAA

Coding sequence (CDS)

ATGTCATGTTGTTCGTCGTTATCAGCGGCTCCTACATCCATGTCTCTGATCACCAAGCGCAAATTCACGAGTTCTGTCAATAAACCTGTGATCGTTTCCATGAATTCTCGCTTCAGAGCTTCTGCAGAAGTTCCCGATTTTCTTCCCGCGGATTGGATTGGGGAAATGATTCTGTTCATGTTCGATTGCGAATTGACGTATCTGAGATTTTCAATTCATTTCGTGTTTTTATCGCAAGAATCTGGTGTGATTGATAGTTTTCCTGGTGTTGGAATTCATTTTCCTTCTCTATTCCGTCCTTTCTTCCTCGGGGCCAAACAGTTTGGTGAAAACTATGTGCCAGTTTGGCATGAGGCACACAAGAAGAATCCTTTAGGTCCAAGTTTACATTTCAATGCAGAAGAAGCTATTCAACACCAGCTAGATGCACTGAGATACAATGATCGGCCCCATCAAGATTATGGAATTGAAGTCATGTACCAGTTTGCTGGGTTTGATCCTCTTCGAAGGTCTACATATTTTGGTCCATTTTTTGATCTGGGACAGTTTGAAAGATTCAGACGAGTATTCCACCATTCGACATATCGAGTGTTGCTTGGTCATAAAGAGAGAAAGATCTTGAGCAGTTTGTCTGTGGAGGAGAACCGATTCAAGCAGCGGGTATGGATACGAGGTTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGCGGCTCGTGGGATGGGTATTGGCTTACAGAAAGTTTACTTAACGATGGGGATGCATTTAGTGGAGGCTTAGCTTACTAA

Protein sequence

MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFMFDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAHKKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGGSWDGYWLTESLLNDGDAFSGGLAY

Homology

[Close]

BLAST of Spg016421 vs. NCBI nr
Match: XP_004136341.2 (uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 9.7e-101
Identity = 195/268 (72.76%), Postives = 200/268 (74.63%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAP+SMSLIT RKFTSSVNKP+IVSMNSRFRASAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 61  -------------------------------------------------------WHDAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KK+P+GP LHF AEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 121 KKDPIGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. NCBI nr
Match: XP_008466381.1 (PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 uncharacterized protein E6C27_scaffold92G003520 [Cucumis melo var. makuwa] >TYK31418.1 uncharacterized protein E5676_scaffold455G007270 [Cucumis melo var. makuwa])

HSP 1 Score: 375.2 bits (962), Expect = 4.8e-100
Identity = 194/268 (72.39%), Postives = 198/268 (73.88%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAP+SMSLIT RKFTSSVNKPV VSMNSRFR SAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 61  -------------------------------------------------------WHDAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KK+P+GP LHF AEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 121 KKDPIGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. NCBI nr
Match: XP_038898556.1 (uncharacterized protein LOC120086152 [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 8.2e-100
Identity = 195/268 (72.76%), Postives = 198/268 (73.88%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAPTSMSLIT RKFTSSVNKPVIVSM SRFRASAEVPDFLPAD         
Sbjct: 48  MSCCSSLSAAPTSMSLITNRKFTSSVNKPVIVSMYSRFRASAEVPDFLPAD--------- 107

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 108 -------------------------------------------------------WHDAH 167

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KK+P+GP LHF AEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 168 KKDPIGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 227

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEEN FKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 228 GQFERFRRVFHHSTYRVLLGHKERKILSSLFVEENLFKQRVWIRGCRPKEEEIFQFTMVQ 251

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 288 RVGGSWDGYWLTESLLNDGDAFSGGLAY 251

[Close]

BLAST of Spg016421 vs. NCBI nr
Match: XP_022132533.1 (uncharacterized protein LOC111005365 isoform X1 [Momordica charantia])

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-99
Identity = 194/268 (72.39%), Postives = 198/268 (73.88%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAPTSMSLITKRKF  +V+KP IVSMNSRFRASAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  W+EAH
Sbjct: 61  -------------------------------------------------------WNEAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KKNPLGPSLHF AEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 121 KKNPLGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILS L VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. NCBI nr
Match: XP_022981205.1 (uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 4.1e-99
Identity = 194/268 (72.39%), Postives = 199/268 (74.25%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAPTSMSLI+KRKFT SVNK VIVSMNSRFRASAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 61  -------------------------------------------------------WHQAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KKNPLGPSLHF AEEAIQ QLDALRYNDRPHQDYGIEVMYQFAGF+PL+RSTYFGPFFDL
Sbjct: 121 KKNPLGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESVLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. ExPASy TrEMBL
Match: A0A0A0LED5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.7e-101
Identity = 195/268 (72.76%), Postives = 200/268 (74.63%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAP+SMSLIT RKFTSSVNKP+IVSMNSRFRASAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 61  -------------------------------------------------------WHDAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KK+P+GP LHF AEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 121 KKDPIGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. ExPASy TrEMBL
Match: A0A5D3E6H6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007270 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.3e-100
Identity = 194/268 (72.39%), Postives = 198/268 (73.88%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAP+SMSLIT RKFTSSVNKPV VSMNSRFR SAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 61  -------------------------------------------------------WHDAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KK+P+GP LHF AEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 121 KKDPIGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. ExPASy TrEMBL
Match: A0A1S3CR52 (uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.3e-100
Identity = 194/268 (72.39%), Postives = 198/268 (73.88%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAP+SMSLIT RKFTSSVNKPV VSMNSRFR SAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 61  -------------------------------------------------------WHDAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KK+P+GP LHF AEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 121 KKDPIGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. ExPASy TrEMBL
Match: A0A6J1BWI6 (uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005365 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.5e-99
Identity = 194/268 (72.39%), Postives = 198/268 (73.88%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAPTSMSLITKRKF  +V+KP IVSMNSRFRASAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  W+EAH
Sbjct: 61  -------------------------------------------------------WNEAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KKNPLGPSLHF AEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL
Sbjct: 121 KKNPLGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILS L VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. ExPASy TrEMBL
Match: A0A6J1IYU2 (uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480415 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.0e-99
Identity = 194/268 (72.39%), Postives = 199/268 (74.25%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFTSSVNKPVIVSMNSRFRASAEVPDFLPADWIGEMILFM 60
           MSCCSSLSAAPTSMSLI+KRKFT SVNK VIVSMNSRFRASAEVPDFLPAD         
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPAD--------- 60

Query: 61  FDCELTYLRFSIHFVFLSQESGVIDSFPGVGIHFPSLFRPFFLGAKQFGENYVPVWHEAH 120
                                                                  WH+AH
Sbjct: 61  -------------------------------------------------------WHQAH 120

Query: 121 KKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDL 180
           KKNPLGPSLHF AEEAIQ QLDALRYNDRPHQDYGIEVMYQFAGF+PL+RSTYFGPFFDL
Sbjct: 121 KKNPLGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDL 180

Query: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 240
           GQFERFRRVFHHSTYRVLLGHKERKILSSL VEENRFKQRVWIRGCRPKEEEIFQFTMVQ
Sbjct: 181 GQFERFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQ 204

Query: 241 RVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           RVGGSWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 241 RVGGSWDGYWLTESVLNDGDAFSGGLAY 204

[Close]

BLAST of Spg016421 vs. TAIR 10
Match: AT2G25605.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 75 Blast hits to 75 proteins in 20 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). )

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-72
Identity = 119/153 (77.78%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 116 WHEAHKKNPLGPSLHFNAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFG 175
           W E+ +K P GP L F+AE+A++HQLDAL+YND P  DYGIEVMY+FAGFDP  RSTYFG
Sbjct: 48  WLESRRKRPFGPRLDFSAEDAVRHQLDALKYNDHPRDDYGIEVMYRFAGFDPFERSTYFG 107

Query: 176 PFFDLGQFERFRRVFHHSTYRVLLGHKERKILSSLSVEENRFKQRVWIRGCRPKEEEIFQ 235
           PFFDLGQFERFRR+FHHS+YRVLLGHK+RK+LSSL VEENRFKQR+WI+G RP+EEEIF+
Sbjct: 108 PFFDLGQFERFRRIFHHSSYRVLLGHKDRKLLSSLFVEENRFKQRIWIQGNRPEEEEIFE 167

Query: 236 FTMVQRVGGSWDGYWLTESLLNDGDAFSGGLAY 269
           FTM QR+GGSWDGYWLTESLL+DGD FSGG+AY
Sbjct: 168 FTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 200

The following BLAST results are available for this feature:

BLAST of Spg016421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136341.2	9.7e-101	72.76	uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus]	[more]
XP_008466381.1	4.8e-100	72.39	PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 unc...	[more]
XP_038898556.1	8.2e-100	72.76	uncharacterized protein LOC120086152 [Benincasa hispida]	[more]
XP_022132533.1	3.1e-99	72.39	uncharacterized protein LOC111005365 isoform X1 [Momordica charantia]	[more]
XP_022981205.1	4.1e-99	72.39	uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima]	[more]

BLAST of Spg016421 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg016421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LED5	4.7e-101	72.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1	[more]
A0A5D3E6H6	2.3e-100	72.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CR52	2.3e-100	72.39	uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=...	[more]
A0A6J1BWI6	1.5e-99	72.39	uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IYU2	2.0e-99	72.39	uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Spg016421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25605.1	3.5e-72	77.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35716	OS05G0574700 PROTEIN-RELATED	coord: 115..268
None	No IPR available	PANTHER	PTHR35716:SF1	OS05G0574700 PROTEIN	coord: 115..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016421.1	Spg016421.1	mRNA