Spg016317 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATTACAGGTCATATGGAAATGGGTTCAATGGAGATAACAATACAGAGAGCAACTACGCAACGAACCCTCGAAACTCCTACGAATTGAGGTCTTATTCTGCATCTTATGCACAAACCCAGATGGAAATCAGGCAATCCCAGTTCAAGAAAGGCAAAAATCCTTCTGGGTCTGTTTCGAAATCTTGGAGCTTCTCGGACCCTGAATTCCAGAGGAAGAAAAGGGTTGCCAATTACAAGATGTATTCTGTCGAAGGCAAAATGAAGGGCTCTTTCAGAAACAGTTTCAGATGGCTGAAGCGCAAGTGTGAACAGGTCGTTTATGGCTGGTGGTGATGGGTGCGTCTAGTTCTCTCCCTGATCTTTTTTTAAGTGCTTTCTTGTAAGTATTTGTGAAAAGTTTCTGTTACAAGAAAGTTGGAAATGAATGGTATCATAGTTCTTGATGATACTTCTGTCTGCCTGTGATTTAATAGAGAGAGAGAGAGAGGAGTTTGAACAATTGTTAATGTTCATCTTGCTAAAATTTCGGTAAGAACTTTGAATTTTTTGTTACTGTTTAGGAAGGGGATTATAAAGGGAGCTTGTGTTGGAGGGAGAATACATTCGATTCTATGTATGGTTATCTTGTCAAGAACTGA ATGGAAGATTACAGGTCATATGGAAATGGGTTCAATGGAGATAACAATACAGAGAGCAACTACGCAACGAACCCTCGAAACTCCTACGAATTGAGGTCTTATTCTGCATCTTATGCACAAACCCAGATGGAAATCAGGCAATCCCAGTTCAAGAAAGGCAAAAATCCTTCTGGGTCTGTTTCGAAATCTTGGAGCTTCTCGGACCCTGAATTCCAGAGGAAGAAAAGGGTTGCCAATTACAAGATGTATTCTGTCGAAGGCAAAATGAAGGGCTCTTTCAGAAACAGTTTCAGATGGCTGAAGCGCAAGTGTGAACAGGAAGGGGATTATAAAGGGAGCTTGTGTTGGAGGGAGAATACATTCGATTCTATGTATGGTTATCTTGTCAAGAACTGA ATGGAAGATTACAGGTCATATGGAAATGGGTTCAATGGAGATAACAATACAGAGAGCAACTACGCAACGAACCCTCGAAACTCCTACGAATTGAGGTCTTATTCTGCATCTTATGCACAAACCCAGATGGAAATCAGGCAATCCCAGTTCAAGAAAGGCAAAAATCCTTCTGGGTCTGTTTCGAAATCTTGGAGCTTCTCGGACCCTGAATTCCAGAGGAAGAAAAGGGTTGCCAATTACAAGATGTATTCTGTCGAAGGCAAAATGAAGGGCTCTTTCAGAAACAGTTTCAGATGGCTGAAGCGCAAGTGTGAACAGGAAGGGGATTATAAAGGGAGCTTGTGTTGGAGGGAGAATACATTCGATTCTATGTATGGTTATCTTGTCAAGAACTGA MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQEGDYKGSLCWRENTFDSMYGYLVKN Homology
BLAST of Spg016317 vs. NCBI nr
Match: XP_022136638.1 (uncharacterized protein LOC111008293 [Momordica charantia] >XP_022158308.1 uncharacterized protein LOC111024820 [Momordica charantia]) HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45 Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Spg016317 vs. NCBI nr
Match: XP_038896667.1 (uncharacterized protein LOC120084929 [Benincasa hispida]) HSP 1 Score: 192.6 bits (488), Expect = 2.2e-45 Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of Spg016317 vs. NCBI nr
Match: KAA0064509.1 (uncharacterized protein E6C27_scaffold255G002260 [Cucumis melo var. makuwa] >TYK20081.1 uncharacterized protein E5676_scaffold134G002050 [Cucumis melo var. makuwa]) HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44 Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Spg016317 vs. NCBI nr
Match: XP_011654415.1 (uncharacterized protein LOC101210762 [Cucumis sativus] >KGN55347.1 hypothetical protein Csa_012203 [Cucumis sativus]) HSP 1 Score: 187.2 bits (474), Expect = 9.1e-44 Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 0
BLAST of Spg016317 vs. NCBI nr
Match: KAG7024353.1 (hypothetical protein SDJN02_13167, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35 Identity = 84/106 (79.25%), Postives = 89/106 (83.96%), Query Frame = 0
BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A6J1C841 (uncharacterized protein LOC111008293 OS=Momordica charantia OX=3673 GN=LOC111008293 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 8.0e-46 Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A5D3D951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002050 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 8.9e-45 Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A0A0L414 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646210 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44 Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 0
BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A6J1IF42 (uncharacterized protein LOC111476369 OS=Cucurbita maxima OX=3661 GN=LOC111476369 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.9e-35 Identity = 83/106 (78.30%), Postives = 88/106 (83.02%), Query Frame = 0
BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A6P3ZT47 (uncharacterized protein LOC107420071 OS=Ziziphus jujuba OX=326968 GN=LOC107420071 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 5.6e-23 Identity = 72/114 (63.16%), Postives = 82/114 (71.93%), Query Frame = 0
BLAST of Spg016317 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 82.0 bits (201), Expect = 3.8e-16 Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of Spg016317 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15 Identity = 53/109 (48.62%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Spg016317 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Spg016317 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 57.8 bits (138), Expect = 7.7e-09 Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of Spg016317 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06 Identity = 36/98 (36.73%), Postives = 50/98 (51.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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