Spg016317 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg016317
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein of unknown function (DUF3511)
Locationscaffold9: 44597270 .. 44597913 (-)
RNA-Seq ExpressionSpg016317
SyntenySpg016317
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATTACAGGTCATATGGAAATGGGTTCAATGGAGATAACAATACAGAGAGCAACTACGCAACGAACCCTCGAAACTCCTACGAATTGAGGTCTTATTCTGCATCTTATGCACAAACCCAGATGGAAATCAGGCAATCCCAGTTCAAGAAAGGCAAAAATCCTTCTGGGTCTGTTTCGAAATCTTGGAGCTTCTCGGACCCTGAATTCCAGAGGAAGAAAAGGGTTGCCAATTACAAGATGTATTCTGTCGAAGGCAAAATGAAGGGCTCTTTCAGAAACAGTTTCAGATGGCTGAAGCGCAAGTGTGAACAGGTCGTTTATGGCTGGTGGTGATGGGTGCGTCTAGTTCTCTCCCTGATCTTTTTTTAAGTGCTTTCTTGTAAGTATTTGTGAAAAGTTTCTGTTACAAGAAAGTTGGAAATGAATGGTATCATAGTTCTTGATGATACTTCTGTCTGCCTGTGATTTAATAGAGAGAGAGAGAGAGGAGTTTGAACAATTGTTAATGTTCATCTTGCTAAAATTTCGGTAAGAACTTTGAATTTTTTGTTACTGTTTAGGAAGGGGATTATAAAGGGAGCTTGTGTTGGAGGGAGAATACATTCGATTCTATGTATGGTTATCTTGTCAAGAACTGA

mRNA sequence

ATGGAAGATTACAGGTCATATGGAAATGGGTTCAATGGAGATAACAATACAGAGAGCAACTACGCAACGAACCCTCGAAACTCCTACGAATTGAGGTCTTATTCTGCATCTTATGCACAAACCCAGATGGAAATCAGGCAATCCCAGTTCAAGAAAGGCAAAAATCCTTCTGGGTCTGTTTCGAAATCTTGGAGCTTCTCGGACCCTGAATTCCAGAGGAAGAAAAGGGTTGCCAATTACAAGATGTATTCTGTCGAAGGCAAAATGAAGGGCTCTTTCAGAAACAGTTTCAGATGGCTGAAGCGCAAGTGTGAACAGGAAGGGGATTATAAAGGGAGCTTGTGTTGGAGGGAGAATACATTCGATTCTATGTATGGTTATCTTGTCAAGAACTGA

Coding sequence (CDS)

ATGGAAGATTACAGGTCATATGGAAATGGGTTCAATGGAGATAACAATACAGAGAGCAACTACGCAACGAACCCTCGAAACTCCTACGAATTGAGGTCTTATTCTGCATCTTATGCACAAACCCAGATGGAAATCAGGCAATCCCAGTTCAAGAAAGGCAAAAATCCTTCTGGGTCTGTTTCGAAATCTTGGAGCTTCTCGGACCCTGAATTCCAGAGGAAGAAAAGGGTTGCCAATTACAAGATGTATTCTGTCGAAGGCAAAATGAAGGGCTCTTTCAGAAACAGTTTCAGATGGCTGAAGCGCAAGTGTGAACAGGAAGGGGATTATAAAGGGAGCTTGTGTTGGAGGGAGAATACATTCGATTCTATGTATGGTTATCTTGTCAAGAACTGA

Protein sequence

MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQEGDYKGSLCWRENTFDSMYGYLVKN
Homology
BLAST of Spg016317 vs. NCBI nr
Match: XP_022136638.1 (uncharacterized protein LOC111008293 [Momordica charantia] >XP_022158308.1 uncharacterized protein LOC111024820 [Momordica charantia])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYRSYGNGF+GD NTE NYA  PRNSY+LRSYSASYAQTQMEI++SQFKK K PSGSV
Sbjct: 1   MEDYRSYGNGFSGDANTEGNYAAKPRNSYDLRSYSASYAQTQMEIKESQFKKAKTPSGSV 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
           SKSWSF+DPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ
Sbjct: 61  SKSWSFADPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 106

BLAST of Spg016317 vs. NCBI nr
Match: XP_038896667.1 (uncharacterized protein LOC120084929 [Benincasa hispida])

HSP 1 Score: 192.6 bits (488), Expect = 2.2e-45
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYRS GNGF G+NNTE NYA NPRN+YELRSYSASYAQTQMEIR SQFKKGK PS SV
Sbjct: 1   MEDYRSNGNGFTGENNTEFNYAPNPRNAYELRSYSASYAQTQMEIRDSQFKKGKTPSESV 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
           SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 106

BLAST of Spg016317 vs. NCBI nr
Match: KAA0064509.1 (uncharacterized protein E6C27_scaffold255G002260 [Cucumis melo var. makuwa] >TYK20081.1 uncharacterized protein E5676_scaffold134G002050 [Cucumis melo var. makuwa])

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44
Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYR +GNGF+G+NNTE NYATN RNSYELRSYSA+YAQTQMEIR SQFKKGK+ SGSV
Sbjct: 1   MEDYRYHGNGFSGENNTEFNYATNSRNSYELRSYSATYAQTQMEIRDSQFKKGKSHSGSV 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 106
           SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 105

BLAST of Spg016317 vs. NCBI nr
Match: XP_011654415.1 (uncharacterized protein LOC101210762 [Cucumis sativus] >KGN55347.1 hypothetical protein Csa_012203 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 9.1e-44
Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYR +GNGF+G NNTE NYATN RNSYELR+YSA+YAQTQMEIR SQFKKGK+ SGSV
Sbjct: 1   MEDYRYHGNGFSGGNNTEFNYATNSRNSYELRTYSATYAQTQMEIRDSQFKKGKSHSGSV 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 106
           SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 105

BLAST of Spg016317 vs. NCBI nr
Match: KAG7024353.1 (hypothetical protein SDJN02_13167, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 84/106 (79.25%), Postives = 89/106 (83.96%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYRS+GNGF GD NTES  ATNP +SYELRSYSASYAQTQME      KKG+   GS 
Sbjct: 1   MEDYRSHGNGFGGDINTESTSATNPGSSYELRSYSASYAQTQMET-----KKGEKGCGSF 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
            KSWS SDPEFQRKKRVA+YKMYSVEGKMKGSFRNSFRWLKR+CEQ
Sbjct: 61  PKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQ 101

BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A6J1C841 (uncharacterized protein LOC111008293 OS=Momordica charantia OX=3673 GN=LOC111008293 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.0e-46
Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYRSYGNGF+GD NTE NYA  PRNSY+LRSYSASYAQTQMEI++SQFKK K PSGSV
Sbjct: 1   MEDYRSYGNGFSGDANTEGNYAAKPRNSYDLRSYSASYAQTQMEIKESQFKKAKTPSGSV 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
           SKSWSF+DPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ
Sbjct: 61  SKSWSFADPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 106

BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A5D3D951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002050 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.9e-45
Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYR +GNGF+G+NNTE NYATN RNSYELRSYSA+YAQTQMEIR SQFKKGK+ SGSV
Sbjct: 1   MEDYRYHGNGFSGENNTEFNYATNSRNSYELRSYSATYAQTQMEIRDSQFKKGKSHSGSV 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 106
           SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 105

BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A0A0L414 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646210 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44
Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYR +GNGF+G NNTE NYATN RNSYELR+YSA+YAQTQMEIR SQFKKGK+ SGSV
Sbjct: 1   MEDYRYHGNGFSGGNNTEFNYATNSRNSYELRTYSATYAQTQMEIRDSQFKKGKSHSGSV 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 106
           SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCE 105

BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A6J1IF42 (uncharacterized protein LOC111476369 OS=Cucurbita maxima OX=3661 GN=LOC111476369 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.9e-35
Identity = 83/106 (78.30%), Postives = 88/106 (83.02%), Query Frame = 0

Query: 1   MEDYRSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPSGSV 60
           MEDYRS GNGF G  NTESNY TNP +SYELRSYSASYAQTQME+     KKG+   GS 
Sbjct: 1   MEDYRSRGNGFGGHINTESNYVTNPGSSYELRSYSASYAQTQMEM-----KKGEKGCGSF 60

Query: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
            KSWS SDPEFQRKKRVA+YKMYSVEGKMKGS RNSFRWLKR+CEQ
Sbjct: 61  PKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSIRNSFRWLKRRCEQ 101

BLAST of Spg016317 vs. ExPASy TrEMBL
Match: A0A6P3ZT47 (uncharacterized protein LOC107420071 OS=Ziziphus jujuba OX=326968 GN=LOC107420071 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.6e-23
Identity = 72/114 (63.16%), Postives = 82/114 (71.93%), Query Frame = 0

Query: 1   MEDY---RSYGNGFNGDNNTESNYATNP--RNSYELRSYSASYAQTQMEI---RQSQFKK 60
           MEDY   +SY  G  G    E+ Y   P    SY+LRSYSASY+QTQM     R  +FKK
Sbjct: 1   MEDYNRSKSYSYG-GGMMQMETYYGPPPGAPTSYDLRSYSASYSQTQMGYNTNRDIKFKK 60

Query: 61  GKNPSGSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
           GK+ SGS S+SW+F+DPEFQRKKRVA+YKMYSVEGKMKGSFR SFRWLK K  Q
Sbjct: 61  GKSTSGSSSRSWNFTDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ 113

BLAST of Spg016317 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-16
Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 0

Query: 1   MEDY--RSYGNG-------FNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQF- 60
           MEDY  RSYG+G       ++    ++   + +     +LRSYS SY      I + Q  
Sbjct: 1   MEDYRSRSYGDGRTSDLQQYSAHRRSDGPDSFSGNGMQDLRSYSTSYTDYPTRIPEDQNP 60

Query: 61  KKGKNPSGSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
           KKG++ S   S SW F DP+ QRKKRV +Y+ Y+VEGK+KGSFR SF+W+K KC +
Sbjct: 61  KKGRSSS---SSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNK 113

BLAST of Spg016317 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 53/109 (48.62%), Postives = 64/109 (58.72%), Query Frame = 0

Query: 1   MEDY---RSYGNGFNGDNNTESNYATNPRNSYELRSYSASYAQTQMEIRQSQFKKGKNPS 60
           MED+   R YG+G         N         + RSYSASY   +  I    +   K  S
Sbjct: 1   MEDFGRQRPYGDGGMQIQPYHGN------QGGDFRSYSASYGTRENNI----YDVKKEKS 60

Query: 61  GSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
            + SKSW  +DPE QRKKRVA+YKMY VEGK+KGSFRNSFRWLK++  Q
Sbjct: 61  IARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQ 99

BLAST of Spg016317 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0

Query: 40  QTQMEIRQSQFKKGK---NPSGSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNS 99
           Q+Q    Q + KK K   N   + S+SWSFSDPE +RK+RVA YK+YSVE KMKGS R S
Sbjct: 32  QSQTNDYQLKIKKSKSVPNADRAASRSWSFSDPESRRKRRVAGYKVYSVEQKMKGSIRKS 91

Query: 100 FRWLK 102
           F+W K
Sbjct: 92  FKWFK 96

BLAST of Spg016317 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.8 bits (138), Expect = 7.7e-09
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 53  GKNPSGSVSKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQ 107
           G++ + S  +    SD E +RKKR+A YK Y+VEGK+K + +N FRW+K KC Q
Sbjct: 52  GRSNASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQ 105

BLAST of Spg016317 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 36/98 (36.73%), Postives = 50/98 (51.02%), Query Frame = 0

Query: 11  FNGDNNTESNYATNPRNSYELRSYSAS---YAQTQMEIRQSQFKKGKNPSGSVSKSW-SF 70
           F+    +ES   TN +    +RSYS S     Q    +R     K K  +    K +   
Sbjct: 23  FSHGEKSESE-PTNQQPPVMMRSYSTSTYNAYQNPTIVRDDSNNKSKRSNKVKKKGFKGL 82

Query: 71  SDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKC 105
            + E QRKKRVA+Y +Y VEG++KGS + SF+W K  C
Sbjct: 83  CEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETC 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136638.11.7e-4589.62uncharacterized protein LOC111008293 [Momordica charantia] >XP_022158308.1 uncha... [more]
XP_038896667.12.2e-4591.51uncharacterized protein LOC120084929 [Benincasa hispida][more]
KAA0064509.11.8e-4490.48uncharacterized protein E6C27_scaffold255G002260 [Cucumis melo var. makuwa] >TYK... [more]
XP_011654415.19.1e-4489.52uncharacterized protein LOC101210762 [Cucumis sativus] >KGN55347.1 hypothetical ... [more]
KAG7024353.12.0e-3579.25hypothetical protein SDJN02_13167, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1C8418.0e-4689.62uncharacterized protein LOC111008293 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A5D3D9518.9e-4590.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L4144.4e-4489.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646210 PE=4 SV=1[more]
A0A6J1IF422.9e-3578.30uncharacterized protein LOC111476369 OS=Cucurbita maxima OX=3661 GN=LOC111476369... [more]
A0A6P3ZT475.6e-2363.16uncharacterized protein LOC107420071 OS=Ziziphus jujuba OX=326968 GN=LOC10742007... [more]
Match NameE-valueIdentityDescription
AT2G19460.13.8e-1643.97Protein of unknown function (DUF3511) [more]
AT5G11970.11.5e-1548.62Protein of unknown function (DUF3511) [more]
AT3G13910.12.0e-1256.92Protein of unknown function (DUF3511) [more]
AT2G47480.17.7e-0948.15Protein of unknown function (DUF3511) [more]
AT1G72720.11.2e-0636.73Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 66..106
e-value: 1.4E-23
score: 82.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 1..106
NoneNo IPR availablePANTHERPTHR33193:SF54DUF3511 DOMAIN PROTEINcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg016317.1Spg016317.1mRNA