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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCTAATGGAGACACAACTCCAGATTATATGGGATGATATCATAATATTACTAGACGCTTCATCACTCGAGAGGGGGCCTCATATGGTCACGCGGTAAAGTTTTACTTCGAGTTGTTAAATCTTATTATTTCATGTTTAAGTTTAATCTTATTTTATTCATTATTTCTTAGAGGTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGTACTAGTGGTGAGGCGAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGGCACCTCCTCCAGGTCCTAGGCGTAGATGACGTGCTCGAGAGGAGGACATTCCGGTTGTGCATGATGAAGTGCACCATAATGTTGAAGATGTACCTCCTCTCACTCAGACACAAGATGGTGGTACTCCTTCCACTCCACTTGTTTTGATCCAAACTCCTGGTATGCAGTATTTTCAAACTCCGATTCCACCATACTATGAGGCTGATCCATCATCATCACATGAGGCAGGTCCCTCATTGTCATATGCTCATAGAGAGGACGTCGTCGTCAACCACCTCGTAACAAGATCAGGCTGGTCCATCATCATCACATGA mRNA sequence ATGCTAATGGAGACACAACTCCAGATTATATGGGATGATATCATAATATTACTAGACGCTTCATCACTCGAGAGGGGGCCTCATATGGTCACGCGGTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGTACTAGTGGTGAGGCGAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGGCACCTCCTCCAGATGTACCTCCTCTCACTCAGACACAAGATGGTGGTACTCCTTCCACTCCACTTGTTTTGATCCAAACTCCTGGTATGCAGTATTTTCAAACTCCGATTCCACCATACTATGAGGCTGATCCATCATCATCACATGAGGCAGGTCCCTCATTGTCATATGCTCATAGAGAGGACGTCGTCGTCAACCACCTCGTAACAAGATCAGGCTGGTCCATCATCATCACATGA Coding sequence (CDS) ATGCTAATGGAGACACAACTCCAGATTATATGGGATGATATCATAATATTACTAGACGCTTCATCACTCGAGAGGGGGCCTCATATGGTCACGCGGTCATGTTTTCAACAAATCCGTGATATAAGTGAAGATCTAGACGTTCTTAATCTGTGTACTAGTGGTGAGGCGAGTATGGAACAACTTCAGCATATGTACCGCATACCTATGGCACCTCCTCCAGATGTACCTCCTCTCACTCAGACACAAGATGGTGGTACTCCTTCCACTCCACTTGTTTTGATCCAAACTCCTGGTATGCAGTATTTTCAAACTCCGATTCCACCATACTATGAGGCTGATCCATCATCATCACATGAGGCAGGTCCCTCATTGTCATATGCTCATAGAGAGGACGTCGTCGTCAACCACCTCGTAACAAGATCAGGCTGGTCCATCATCATCACATGA Protein sequence MLMETQLQIIWDDIIILLDASSLERGPHMVTRSCFQQIRDISEDLDVLNLCTSGEASMEQLQHMYRIPMAPPPDVPPLTQTQDGGTPSTPLVLIQTPGMQYFQTPIPPYYEADPSSSHEAGPSLSYAHREDVVVNHLVTRSGWSIIIT
Homology
BLAST of Spg016285 vs. ExPASy TrEMBL
Match: A0A5A7SMM2 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002820 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 5.0e-04 Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 0
Query: 32 RSCFQQIRDISED-LDVLNLCTSGEASMEQLQHMYRIPMAPPPDVPPLTQTQDGGTPSTP 91
RS ++RD+++D VL++C + E M+++ +MY +P+ PPP +QT G +P
Sbjct: 41 RSNNARLRDVTDDSQQVLDICNNNERYMDEIYNMYDLPIVPPPVHRGRSQTGYG----SP 100
Query: 92 LVLIQTPGMQYFQTPIPP-YYE--ADPSSSH-EAGPSLSYAHR 130
+ ++ T G Y + + YY+ PSSS+ + GPS SY HR
Sbjct: 101 MTMMPTIGAGYCDSEVDTGYYDTGVSPSSSYMDVGPSTSYMHR 139
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A5A7SMM2 | 5.0e-04 | 34.95 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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