Spg016220 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016220
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold9: 41996791 .. 42001235 (-)
RNA-Seq Expression	Spg016220
Synteny	Spg016220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAGGCCGAGCACATGGTCGACCTCGGCCATGGGCCGAGGCCAACCCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTTGGTCCCGTCTGGTCCCCACTGCCTCTGGATGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAAACCCTAAAAAGGCTAGGAGGATGAACAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAACTCTACTCTCTATTCTCTGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGTTTGCTGACTTAAGCATCGGAGCCGGTGTGGAGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTAGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAGTTGACCCGCCCTTCACAGAGGAAGTCATGAAAGCCGAGGTGCCACAGAAGTTCAAGGTACCTACATTCACACCGTACGATGGCAAGAAAGACCCTGTGCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCGGACGCAATCAGGTGCCGTGCCTTCTTTTTCACTTTGACAGGATCAGCCAAGCATTGGTTTGAAAGGCTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAACGCAAGCCCCACATCAACCTCTTAACAGTCAAGCAGCAGCCAGGAGAGAGCTTGCGCGATTACATAACGCGTTTTAACGACGAAGCACTGCAAGTTGAGGGATACAGTGAGGGAGCAGCCCTGGTAGCCATAACAGCCGGACTGGAAGACGAGAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTACGCAGAGTTTGTCTCCCGGGCACAGAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCATCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGGGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGGTATGTACTCTGTCCATCTATCAAAGGCGTCCCCCCCTTTGGAGTTCACCGAGGCTGAGGCAGCAAGCATTTATCAGCCACATAATGATGCTCTGGTGGTCACTCTAATTGTGGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCAGCCTTCAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGACCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATCAGTTACTGAAGTTTCCAACTCCGAACGGTGTGGGAGTCGTCAAGGGAGAACAGAAGGAATCAATGGAGTGTTACTGGACTGCACTAAAAGCTGTCAAGCCACAGAGGGCCGAGGCCGACCAGGCCGAGGCCGACCAGAGAATGAGCCGAGGTCGAGCAGCACACACTTGCACCAATACTGAATCTGAACTTATGGAGTTTTAGGGTTTTTCGTTTATTGCATTCTATCATGTAATTAGACATTGTTTACTTTGTTGCTGCTTCTAGTATAGGTTCAATGTTTTTTCTTCATTCAAAGTGTGAAAGTTTAATTAATAGCCTTACAGTTTCGCCATTAAAGTTCAGTATTCAGGAGTGTGCGCAAGGCAACCGACTCAAGCATCAAGACATGCGAGCCTGGACTATCGAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGTCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGTCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGCCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCACGTGAGCCTGGACCAACGAGTCTACCTCACCTCCTCTGGCCTGAGCATCCTTACACCGGGCGAGCCTGGACTGCCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAAAGTGAGACCATGTGAGCCTGGACCAACGAGTCTACCTCACCTCACCTGACATGAGTCAATACACTTCATCTAAGTCAAGCTCACCCTGCAGAAGCCAGGACCAAGCACCTCTTGCCAAGGCCGAGCACCTCTTGCCGAGGCCGAGCACAAACTCTAAAGGTATTCTCCTATTTACTCAACTATACTTTGTGTTTTAATAAAGTTTTTCTTGAGATTGGGGGCTGTAAAGGGGATATGCACTCCCTATTAAACAAAAAGCAAGTAACAGGGGATATGCACTCCCTATTAAACAAAAAGCACCCAAGTTTAGCATGTTCTACAAAAATTTACATGTTCGAACCTATTCTCTTGTTATTTCCCTACAAGGACTAACATATGGATGCAGGGAGCCAAATTTTAGGCTAGCGGGGGCTTGAGGCCGAGGCCGACCCTAGCCACTTCCCTCACTTTTCTTTTGTAGAAAACAACTTTTCTATGCAGGAGCTCGAAACCTTTTGTGCTTGCATATTTTCATGGACAAGCCCTGGATATGAAGCACTCCGAATGACCCGGTACGGGGGTCTTCCCGAGGCCGAGGCCGACCAGGCAAGCAGAAAGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGAGGCCGACCAGCACCACTTTTGTAATCTCTCACCCTTTTTCATTTCCATTACATCTAACCCCTATTCAGGGAGTGTCTACTTCTATCTTACTTTGCAGGATGACAACAAAGCTACACATAAGCCAGCCCAAGACAAGGGTCATTACTCTTAA

mRNA sequence

ATGGCCGAGGCCGAGCACATGGTCGACCTCGGCCATGGGCCGAGGCCAACCCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTTGGTCCCGTCTGGTCCCCACTGCCTCTGGATGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAAACCCTAAAAAGGCTAGGAGGATGAACAGGCCACGTCTTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTAGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAACGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCATCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGGGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGGAGTGTGCGCAAGGCAACCGACTCAAGCATCAAGACATGCGAGCCTGGACTATCGAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGTCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGTCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGCCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCACGTGAGCCTGGACCAACGAGTCTACCTCACCTCCTCTGGCCTGAGCATCCTTACACCGGGCGAGCCTGGACTGCCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAAATCAAGCTCACCCTGCAGAAGCCAGGACCAAGCACCTCTTGCCAAGGCCGAGCACCTCTTGCCGAGGCCGAGCACAAACTCTAAAGGAGCTCGAAACCTTTTGTGCTTGCATATTTTCATGGACAAGCCCTGGATATGAAGCACTCCGAATGACCCGGTACGGGGGTCTTCCCGAGGCCGAGGCCGACCAGGCAAGCAGAAAGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGAGGCCGACCAGCACCACTTTTGTAATCTCTCACCCTTTTTCATTTCCATTACATCTAACCCCTATTCAGGGAGTGTCTACTTCTATCTTACTTTGCAGGATGACAACAAAGCTACACATAAGCCAGCCCAAGACAAGGGTCATTACTCTTAA

Coding sequence (CDS)

ATGGCCGAGGCCGAGCACATGGTCGACCTCGGCCATGGGCCGAGGCCAACCCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTTGGTCCCGTCTGGTCCCCACTGCCTCTGGATGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAAACCCTAAAAAGGCTAGGAGGATGAACAGGCCACGTCTTCCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTAGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAACGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCATCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGGGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGGAGTGTGCGCAAGGCAACCGACTCAAGCATCAAGACATGCGAGCCTGGACTATCGAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGTCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGTCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGTGAGCCTGGACCGACGAGTCTACCTCACATCCTCTGGCTTGAGCATCTTTACACCGGGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCACGTGAGCCTGGACCAACGAGTCTACCTCACCTCCTCTGGCCTGAGCATCCTTACACCGGGCGAGCCTGGACTGCCGAAGTCTACCTCGCCTCATCCAGAGTGAGACCATGCGAGCCTGGACTGTCGAAGTCTACCTCGCCTCATCCAAATCAAGCTCACCCTGCAGAAGCCAGGACCAAGCACCTCTTGCCAAGGCCGAGCACCTCTTGCCGAGGCCGAGCACAAACTCTAAAGGAGCTCGAAACCTTTTGTGCTTGCATATTTTCATGGACAAGCCCTGGATATGAAGCACTCCGAATGACCCGGTACGGGGGTCTTCCCGAGGCCGAGGCCGACCAGGCAAGCAGAAAGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGAGGCCGACCAGCACCACTTTTGTAATCTCTCACCCTTTTTCATTTCCATTACATCTAACCCCTATTCAGGGAGTGTCTACTTCTATCTTACTTTGCAGGATGACAACAAAGCTACACATAAGCCAGCCCAAGACAAGGGTCATTACTCTTAA

Protein sequence

MAEAEHMVDLGHGPRPTLGPLARAEPVWSRLVPTASGCPGFAWFDLKRLRNPKKARRMNRPRLPPSSTNLPLVAREGQVRSSGQNRPSTVGAVCGEESLPNLHIGHSMSKGMEKGNQDINTENSDGDRHQRRSRAESPRPRSPLPSSREKQTDLKFAALENKVSAMDQNLSRILRILDKPGPSTRTLDERLVRDPRKGKEPLERTAESETRSKGKKTSSMTSKVRGLKPTDRTILRSPESSTLKGHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNALKELGNPQGELPNAEELLKSKKSEREHKRSSTSDHDSRKDKKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGVCARQPTQASRHASLDYRVYLASSRVRPCESGPTSLPHILWLEHLYTGRAWTVEVYLASSRVRPCESGPTSLPHILWLEHLYTGRAWTVEVYLASSRVRPCEPGPTSLPHILWLEHLYTGRAWTVEVYLASSRVRPREPGPTSLPHLLWPEHPYTGRAWTAEVYLASSRVRPCEPGLSKSTSPHPNQAHPAEARTKHLLPRPSTSCRGRAQTLKELETFCACIFSWTSPGYEALRMTRYGGLPEAEADQASRKGDSCARPLPEAEADQHHFCNLSPFFISITSNPYSGSVYFYLTLQDDNKATHKPAQDKGHYS

Homology

[Close]

BLAST of Spg016220 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 4.2e-33
Identity = 85/166 (51.20%), Postives = 106/166 (63.86%), Query Frame = 0


Query: 363 KKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 422
           K+ R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+
Sbjct: 368 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKA 427

Query: 423 SPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRL 482
           S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           
Sbjct: 428 SSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA----------- 487

Query: 483 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGV 529
           T++G   + P REIRTI GGP    S RKRKA  REAR   E   V
Sbjct: 488 TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEV 522

[Close]

BLAST of Spg016220 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 144.4 bits (363), Expect = 4.3e-30
Identity = 83/175 (47.43%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 363 KKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 422
           K+ R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK 
Sbjct: 152 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKV 211

Query: 423 SPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRL 482
              +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           
Sbjct: 212 PSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA----------- 271

Query: 483 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGVCARQPTQAS 538
           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E   V     T  S
Sbjct: 272 TQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRS 315

[Close]

BLAST of Spg016220 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-29
Identity = 85/178 (47.75%), Postives = 105/178 (58.99%), Query Frame = 0


Query: 352 SSTSDHDSRKD-KKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRN 411
           S    +  R D K+ R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N
Sbjct: 181 SKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKN 240

Query: 412 TGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPK 471
             LLK+P RM +S  +R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPK
Sbjct: 241 QRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPK 300

Query: 472 AEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGV 529
           A           T++G   + P REIRTI GGP    S RKRK   REAR   E   V
Sbjct: 301 A-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKPDVREARASREQNEV 347

[Close]

BLAST of Spg016220 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 136.7 bits (343), Expect = 9.0e-28
Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 340 LKSKKSEREHKRSSTSDHDSRKDKKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAV 399
           L+ K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT V
Sbjct: 44  LEGKRADQKRERSGEKPLSSKWEKQDRV----VGQKDLPR----------KFEKYTPTTV 103

Query: 400 PQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN 459
           P EQVLMEI++  LLK+P  MK+ P++R K +YCLFHRDHGH+T +C  LK+E+E LI+ 
Sbjct: 104 PLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGLIRK 163

Query: 460 GYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREA 519
           GYLKE+V + KA  ++            D + P REIRTI GG     S RKRKA  REA
Sbjct: 164 GYLKEYVDDLKATPNR----------ENDNKSPTREIRTIMGGSTEQESDRKRKASVREA 203

Query: 520 RFEP 524
           R  P
Sbjct: 224 RDGP 203

[Close]

BLAST of Spg016220 vs. NCBI nr
Match: XP_022148920.1 (uncharacterized protein LOC111017470 [Momordica charantia])

HSP 1 Score: 124.4 bits (311), Expect = 4.6e-24
Identity = 81/228 (35.53%), Postives = 130/228 (57.02%), Query Frame = 0


Query: 298 EAEARLAEAEAKKDNLPWKTELLNALKELGNPQGELPNAEELLKSKKSEREHKRSSTSDH 357
           EA A  AE   K   +    ELL    + G P+ ++   +   + KK++ +++   +S  
Sbjct: 43  EAPATFAEVLQKAKKVIDGQELLRT--KTGRPEKQIDQKKLSQEKKKADSKYRDKGSSSS 102

Query: 358 DSRKDKKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTG---LL 417
            SR +  +R  E G          P R+ P   +E+YTPT +P  ++L  I  +G   LL
Sbjct: 103 ASRTE--YRRLESG----------PSRSRP---YERYTPTTIPISEILTNIEESGMEKLL 162

Query: 418 KFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEAD 477
           K P +++  P++R+K +YC FHRDH H+T +C +LK +IE LIQ+GY K+FVG+P++ + 
Sbjct: 163 KRPEKLQGDPEKRNKDKYCRFHRDHDHNTTSCWELKRQIEGLIQDGYFKKFVGKPRSNSV 222

Query: 478 QGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFE 523
           +   + + ++    +++    I TIFGGP+GG S  KRK +AREAR E
Sbjct: 223 EKKEKRKRSRTPPCRDDRPAVINTIFGGPSGGQSGNKRKELAREARRE 253

[Close]

BLAST of Spg016220 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-33
Identity = 85/166 (51.20%), Postives = 106/166 (63.86%), Query Frame = 0


Query: 363 KKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 422
           K+ R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+
Sbjct: 368 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKA 427

Query: 423 SPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRL 482
           S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           
Sbjct: 428 SSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA----------- 487

Query: 483 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGV 529
           T++G   + P REIRTI GGP    S RKRKA  REAR   E   V
Sbjct: 488 TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEV 522

[Close]

BLAST of Spg016220 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-30
Identity = 83/175 (47.43%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 363 KKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 422
           K+ R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK 
Sbjct: 152 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKV 211

Query: 423 SPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRL 482
              +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           
Sbjct: 212 PSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA----------- 271

Query: 483 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGVCARQPTQAS 538
           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E   V     T  S
Sbjct: 272 TQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRS 315

[Close]

BLAST of Spg016220 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-29
Identity = 85/178 (47.75%), Postives = 105/178 (58.99%), Query Frame = 0


Query: 352 SSTSDHDSRKD-KKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRN 411
           S    +  R D K+ R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N
Sbjct: 181 SKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKN 240

Query: 412 TGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPK 471
             LLK+P RM +S  +R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPK
Sbjct: 241 QRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPK 300

Query: 472 AEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRGV 529
           A           T++G   + P REIRTI GGP    S RKRK   REAR   E   V
Sbjct: 301 A-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKPDVREARASREQNEV 347

[Close]

BLAST of Spg016220 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-28
Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 340 LKSKKSEREHKRSSTSDHDSRKDKKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAV 399
           L+ K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT V
Sbjct: 44  LEGKRADQKRERSGEKPLSSKWEKQDRV----VGQKDLPR----------KFEKYTPTTV 103

Query: 400 PQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN 459
           P EQVLMEI++  LLK+P  MK+ P++R K +YCLFHRDHGH+T +C  LK+E+E LI+ 
Sbjct: 104 PLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGLIRK 163

Query: 460 GYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREA 519
           GYLKE+V + KA  ++            D + P REIRTI GG     S RKRKA  REA
Sbjct: 164 GYLKEYVDDLKATPNR----------ENDNKSPTREIRTIMGGSTEQESDRKRKASVREA 203

Query: 520 RFEP 524
           R  P
Sbjct: 224 RDGP 203

[Close]

BLAST of Spg016220 vs. ExPASy TrEMBL
Match: A0A6J1D4A4 (uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017470 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.2e-24
Identity = 81/228 (35.53%), Postives = 130/228 (57.02%), Query Frame = 0


Query: 298 EAEARLAEAEAKKDNLPWKTELLNALKELGNPQGELPNAEELLKSKKSEREHKRSSTSDH 357
           EA A  AE   K   +    ELL    + G P+ ++   +   + KK++ +++   +S  
Sbjct: 43  EAPATFAEVLQKAKKVIDGQELLRT--KTGRPEKQIDQKKLSQEKKKADSKYRDKGSSSS 102

Query: 358 DSRKDKKHRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTG---LL 417
            SR +  +R  E G          P R+ P   +E+YTPT +P  ++L  I  +G   LL
Sbjct: 103 ASRTE--YRRLESG----------PSRSRP---YERYTPTTIPISEILTNIEESGMEKLL 162

Query: 418 KFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEAD 477
           K P +++  P++R+K +YC FHRDH H+T +C +LK +IE LIQ+GY K+FVG+P++ + 
Sbjct: 163 KRPEKLQGDPEKRNKDKYCRFHRDHDHNTTSCWELKRQIEGLIQDGYFKKFVGKPRSNSV 222

Query: 478 QGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFE 523
           +   + + ++    +++    I TIFGGP+GG S  KRK +AREAR E
Sbjct: 223 EKKEKRKRSRTPPCRDDRPAVINTIFGGPSGGQSGNKRKELAREARRE 253

The following BLAST results are available for this feature:

BLAST of Spg016220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	4.2e-33	51.20	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	4.3e-30	47.43	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_022142767.1	2.2e-29	47.75	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022159192.1	9.0e-28	45.11	uncharacterized protein LOC111025612 [Momordica charantia]	[more]
XP_022148920.1	4.6e-24	35.53	uncharacterized protein LOC111017470 [Momordica charantia]	[more]

BLAST of Spg016220 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg016220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	2.0e-33	51.20	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	2.1e-30	47.43	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	1.0e-29	47.75	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DZ52	4.4e-28	45.11	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D4A4	2.2e-24	35.53	uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Spg016220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 259..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 702..731
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016220.1	Spg016220.1	mRNA