Spg016207 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016207
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PRA1 family protein
Location	scaffold9: 37923962 .. 37928808 (-)
RNA-Seq Expression	Spg016207
Synteny	Spg016207

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACACTTTTTTGGGTCAAAAGAAACCCAATTCCCCGAACTCCGGGCCCGCCGGGAACCTTAACCGTGGCATCGGTGATTTGATTGGCGAGACGAAGGAGAAAGAATCAGCCACCTCCATCTGTCTGCAACAGAATAAAACAACAATCTCAAATCAACAATCTTCAACCACAATCCAATTCAATTACAATTAGTCTTTGTAAATAACCCTTTTGTCTCTTTCGATTCTGAGTCCCCTGTTCGTCTGTTGTTCGGATTACGAATGAGTTTCTCATCCAATCCACTCTCCCTCAGCGTCCCTGACGGTGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCCATTCCTCCTCCGCCGCCGCTGCCGCTGCTCCCACCACACCCACCTCCGCCCCCACCGCCCCTTTAGCCACCGGTTTCTTTATCTCCCTCTTCTCTCGTATCGGGACCCTTCTTTCTATTTTTACTCTTAACCCCTTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGGCCGACCCCCTCCTGGACCTCTGGGTTTGTTGGGTTTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTGAGAGTCCACGAGAATGCTAAACGCTATGCTCGCAATTACGCATCCCTGTTTGTTCTCTTCTTTGTCTGTACGCTGTATGTTCTTCTTTCTCTTTCTTTATTTGTCTTTATTGATGGGGTGTGTGCTGGAGATTCTGTTCTTCAAGGAATTGGGTTCTGTTCGGTTTTTCATGAAGGGATAGAGAAGAGTAGAAGCTATGGAAATTCGATTTGTTAAATGCATTTGCAAATACGATGACGGGTTTAGTGGTTTGATTGGATTTTTGAAGCTCATGGGGTCAAAAGCTTTTGGAGCCCACTCGAATGCTAATTCTAGTGTCTAACATACAGAAAGAATTACGAGCATGCCTTTTAAATTCTGTGCAACAGAAATTGTGACTTGCCTTTGAACTATTCGAAACGGTTGGATTAAATGAAACTATCAGGCTGTTGCATTTTTCTTCTCATGTATTCCTTTTGTTGATTCAAGTGGTTTAACCGAACAGAGAGCCACTGTTGCCTTTGTCGGTCATTTAACTGGAACACTATTACTGGGTTATGATATTCTTTTCATTCTCTCTTATTTGGGACGAATGAGCGTTTGCATGGAATGAAAATAAAAACTAAGTTGGTTAGAGATTTATGGAAAATTTACGACCTCTATTTTATCAATTCCTTGTCTCTTAAGTTTAAATTCTCTTGTGAATGATTTCAGGTACCAGATGCCTCTTGCCCTCCTTGGATTGGTATCATGTTTAGCACTTTGGGACCTTGTTAAGTTTTGCGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGTCTGGTTCGCATTGCTCAATGTGGTAAATTATTAACGTTTTAAGTGAGAGCATGTTCATTTACACATCTGAGAAGTTCCTCCCAAGTATTCTCTTTAAACATGTATTAATTCACTGGTAAAATTTTTCCTTGTCGCATTCTTCAATATGATAATATGATATACATCTAGTGTTAGACCTCAATTTTTCTTGAGTGTTATCGCATAGATCACTAGGGTGGATGTGGTCTGGATATCAGATTCTCCGATTAAACGCATGAATTGGATTTCTCATTTTTTGACTGAGCATACTATGTTAGGGAATAACGGATACCCACATATGTCCATAATGGTATGATATTGTCCACTTTGAGCAAGAGCTCTCATGGGTTTGCTTGTGGTTCTTCCCAAAGGCGTCATTCTAATGGAGATACTTATCCTCCCTTATATATTCATGATTTTTCCCTTATCTAGTCGATGTAGGACTTTGGTCGCACTTCCAACAATCCTACTCTCAAACAAAGTACCATTGAGCCTCCCCTCAAAGAGTCATTTATCTGTCAAACTCTCTAGGCTTTACCGCTTTACCGAGGCTTTGCTCTTATCTAGAACAACTCTTCTCCGGAGTATAATGCTTGCCCAGAGCCCAACCACGGACCTCCATCATGACTATTAAGGCTCACAACTTCTTTGTTTGGCATCGAGGATTCTACCCAACATGGCTACGTCAGGGGCATGGCTCTAATACCACTTGTTAGACCAAAAGTGGAGAGAACAAATATAATAGAGGAATAAAGTGAAGAATGAAGTGGTGTTAAATTCCATTAAGAGTAGGGTCTTGTATAGGCTCCAAAAAACATTAAATTCAGTACAAGTCTTCGTTCAACCCAAAGAATAGGAACAACTCATAAGAATAGCTATTGACTTTGAAAACAAAATCATTCAACTAAACTAAACCTATTCAACTTTTAACACCCTCCCTTAAAGTAAAACGATGCAATTAGTATTTAATTTAAAGTAGAGGAGGAAACCACCCCAAACAAATTTCGAAGCTTCACAAATGTTGCTAATTTGAGAGGCTTGGTTAAAATATCTGCAACCTGATCTTCACTCTTAGTCTCTTACAATAGCTCAGTTTGATAATTTCATCATTTGTAAGATCTCTTAAGTAATGTTATCTTACATCGATGTGTTTACTTCGTTCTAGTTGCAAGACACGATATCATTTGAATGGTGCTAGCATTGGCAACAAATAATTGGAAAATTCTTCGAATGGATGTGAAATTAGCCTTTCTGCATGGAAACTTGAATGAAGAAGTTTTCATAGATCAACCCCCTGGCTATGCCCAATAGAGCAATGTAGGAAAGGTATATTGATTAAAGAAAGCTTTATATGGGTTGAGGGCTCGGTATAGTCGAATTGAGGCCTACTTTATTAAAGTGGGATTTGAAAAATATCCATATGAACCTACTTTATTAAAGTAGGCCTATACCAAGCCCTATGAGTTTGCTTCAACCCATATAAAGCTTTCTTCAATCGATATACCATTTTTTCATGGCTCTGTTAAACATAGTCAGAGGGTTGATCTATGAAAACTTCTTCATTCAAATTTCCATGCAGAAAGGCTAATTTCACATCCATTTGAAGAATTTTCCAATTTTTTTGTGCTGCCAATGCTACCACCATTCAAATGGTATCGTGTCTTGCAACTAAAGCGAAGTAAACACATCGATGTAAGATATCATTACTTAAGGGATCTTACAAATAATGAAAGTATCAAACTGAGCTATTGTAGGAGTGAAGATTAGGTTGTAGATATTTTAACCAAGCTTCTCAAAGTAGCAACATTTGTGAAGCTTTGAAATTTGCTTGGGGTGGTTGCCTCTTTTACTTTAAACTAAATACTAATTGCATCCTTTTAGTTTAAGGAAGTGTGTTAAAAGTTGAATATAAGTTTAGTTTACTTGAATGAGTTTGTTTTCAAAGTAAAAATAGCTATTCTTATGGGGTTTTCCTATTCTTTGGATGGCATGAAGACTTGTACTAAATTTAGTGTATTTTGGTACCTATATAAGGTCTTACTCTTAATGGAATTTAACACCATTTCATTCTTCACTTTCTTCCTCTATTACATTTGTTCTCTCCACTTTTGGTCTGACAAGTGGTGTCGAACAAAGAAGTTGTGAGCTATAGTCATAGTAGAGGTCTATGGTTGAGCTCTTTGCAGGCGGTATACTCCGAAGAAGAGGAGTTTTCCTAGATAAGAGCAGCCTAGAGAGTTAAACGGATAAATGACTATTTGAGGGAAAGCTCGGTGGTACTTTATTCAAGAGGAGAATTGTTGGAAGTGCGACCAAAATCTCACATTAGCTAGATAAGGGGAAGATCATGGGTATATAAAGGAGGACAGGTATCTCCATTGGAATAAGGCCTTTTGGAAAAACCAAAAGCAGAGCCATGAGGGTATGCCCAAAGTGGACAATATCATACATATGTAGATATGTGGGTGTCTATTGTTCCCTAACAGCATATACATATAGTAGTCGTTGAATGGTTATTGTTGCCAGTTCCCTTCGGTGAAATTAATCAATTCCTATGGCTTTCATTTTCTCAATTTAAGATGCCTGAGAACTTAAGCTCAGTTGTCCTGAGTTCTGAGAAATCGAGCCAATGTGTTGGCTAAGTGGGTAGGACAAGCATAATGCACGATTGATCTTGTAAAAGTTTTTTACGTACTACTTCAAATTGCTATGCGGAACCTTTGAGATTTGTTTCGAAACTTAGCTTGTTTTTGAGAAAGCTTTTGGGAATTCTTGGACGTAAAATTCTTTCTGCTTGACCTTACTTGCGTGCATATATCAATCAATTCTATGTAAATTACCATGCATGAGCTCACAATTGTTTGAGCTGCTACTGTGAGTTAATTACATCAGTAATCTTAATTAATCCATCTTTTCTTCCAAATACTTAGCAAGTGCAACGTTTTGCAGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCACTTGGCATTGGATATACAGGTGACTCCAAAACTTTTCTATGATGTTATAGAGCTCATCTTGATCAGTTGTTCTTATTATTTGAAGTTTTGGCAGGCATGATTCTGCATGCTGCATTTCGGAAGCTGACTCTCGCTAAGCCCCCATCTACAGGAAGTCGAAAATAGCCAGCTACAGACAATGATATTTTTACTCTTGTATGTGAGTTATGTTTGAGGCTTTGAGCAAGTTTACTGCAAGGTACCGACATCTGATTCTGTGATAAGACGAAAAGTGCTGGTAATTCTGAATGCTATACCTCCGCATTCTGCTTGCTTGAAAGCATGGCTCATGTCCTGCATGGGACACCGTACCTTTGCTAGAAAATTCACATTATGGCATGGGGTTCTCTGA

mRNA sequence

ATGAGTTTCTCATCCAATCCACTCTCCCTCAGCGTCCCTGACGGTGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCCATTCCTCCTCCGCCGCCGCTGCCGCTGCTCCCACCACACCCACCTCCGCCCCCACCGCCCCTTTAGCCACCGGTTTCTTTATCTCCCTCTTCTCTCGTATCGGGACCCTTCTTTCTATTTTTACTCTTAACCCCTTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGGCCGACCCCCTCCTGGACCTCTGGGTTTGTTGGGTTTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTGAGAGTCCACGAGAATGCTAAACGCTATGCTCGCAATTACGCATCCCTGTTTGTTCTCTTCTTTGTCTGTACGCTGTACCAGATGCCTCTTGCCCTCCTTGGATTGGTATCATGTTTAGCACTTTGGGACCTTGTTAAGTTTTGCGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGTCTGGTTCGCATTGCTCAATGTGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCACTTGGCATTGGATATACAGGCTTTGAGCAAGTTTACTGCAAGGTACCGACATCTGATTCTGTGATAAGACGAAAAGTGCTGGTAATTCTGAATGCTATACCTCCGCATTCTGCTTGCTTGAAAGCATGGCTCATGTCCTGCATGGGACACCGTACCTTTGCTAGAAAATTCACATTATGGCATGGGGTTCTCTGA

Coding sequence (CDS)

ATGAGTTTCTCATCCAATCCACTCTCCCTCAGCGTCCCTGACGGTGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCCATTCCTCCTCCGCCGCCGCTGCCGCTGCTCCCACCACACCCACCTCCGCCCCCACCGCCCCTTTAGCCACCGGTTTCTTTATCTCCCTCTTCTCTCGTATCGGGACCCTTCTTTCTATTTTTACTCTTAACCCCTTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGGCCGACCCCCTCCTGGACCTCTGGGTTTGTTGGGTTTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTGAGAGTCCACGAGAATGCTAAACGCTATGCTCGCAATTACGCATCCCTGTTTGTTCTCTTCTTTGTCTGTACGCTGTACCAGATGCCTCTTGCCCTCCTTGGATTGGTATCATGTTTAGCACTTTGGGACCTTGTTAAGTTTTGCGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGTCTGGTTCGCATTGCTCAATGTGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCACTTGGCATTGGATATACAGGCTTTGAGCAAGTTTACTGCAAGGTACCGACATCTGATTCTGTGATAAGACGAAAAGTGCTGGTAATTCTGAATGCTATACCTCCGCATTCTGCTTGCTTGAAAGCATGGCTCATGTCCTGCATGGGACACCGTACCTTTGCTAGAAAATTCACATTATGGCATGGGGTTCTCTGA

Protein sequence

MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAPLATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGFEQVYCKVPTSDSVIRRKVLVILNAIPPHSACLKAWLMSCMGHRTFARKFTLWHGVL

Homology

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BLAST of Spg016207 vs. NCBI nr
Match: KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 3.8e-108
Identity = 203/217 (93.55%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRH SSA AAAAPT PT    AP
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRH-SSATAAAAPTRPTPIAVAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFIS FSRIGTLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWD+VKFCGDRWGLDKYP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVRIAQCVTVIILLFSNFQMAIFCALG+GYTG
Sbjct: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTG 216

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BLAST of Spg016207 vs. NCBI nr
Match: XP_038898448.1 (PRA1 family protein H [Benincasa hispida])

HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107
Identity = 203/217 (93.55%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFS NPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRH SSA AAAAPT PT A  AP
Sbjct: 1   MSFSPNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRH-SSAPAAAAPTRPTPAAAAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFISLFSR+GTLLSIFTLNPF+KLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRMGTLLSIFTLNPFAKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWD+VKFCGDRWGLDKYP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCGDRWGLDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           V+WQCLVRIAQCVTVIILLF NFQMAIFCALGIGYTG
Sbjct: 181 VLWQCLVRIAQCVTVIILLFCNFQMAIFCALGIGYTG 216

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BLAST of Spg016207 vs. NCBI nr
Match: XP_022935725.1 (PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935727.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935728.1 PRA1 family protein H-like [Cucurbita moschata])

HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-107
Identity = 201/217 (92.63%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRH SSA AA APT PT    AP
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRH-SSATAATAPTRPTPIAVAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFIS FSRIGTLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWD+VKFCGDRWGLD+YP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVRIAQCVTVIILLFSNFQMAIFCALG+GYTG
Sbjct: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTG 216

[Close]

BLAST of Spg016207 vs. NCBI nr
Match: XP_023535020.1 (PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535023.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 4.2e-107
Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRH SSA AA APT PT    AP
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRH-SSATAATAPTRPTPTAVAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFIS FSRIGTLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWD+VKFCGDRWGLDKYP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVRIAQCVTVIILLFSNFQMAIFCAL +GYTG
Sbjct: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALAVGYTG 216

[Close]

BLAST of Spg016207 vs. NCBI nr
Match: XP_022976569.1 (PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976572.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976573.1 PRA1 family protein H-like [Cucurbita maxima])

HSP 1 Score: 398.7 bits (1023), Expect = 4.2e-107
Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRH SSA AA APT PT    AP
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRH-SSATAATAPTRPTPTAVAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFIS FSRIGTLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWD+VKFCGDRW LDKYP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVRIAQCVTVIILLFSNFQMAIFCALG+GYTG
Sbjct: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTG 216

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BLAST of Spg016207 vs. ExPASy Swiss-Prot
Match: Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.5e-64
Identity = 126/220 (57.27%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPT-- 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RTS     +SS+A+ ++    TSA +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  --APLATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPFSKLSA DFSG T  WT+GF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW+L K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYT 217
           D++P + +  + I QC T ++L F N QMA+F AL I Y+
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYS 220

[Close]

BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.5e-107
Identity = 201/217 (92.63%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRH SSA AA APT PT    AP
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRH-SSATAATAPTRPTPIAVAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFIS FSRIGTLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWD+VKFCGDRWGLD+YP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVRIAQCVTVIILLFSNFQMAIFCALG+GYTG
Sbjct: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTG 216

[Close]

BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.0e-107
Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRH SSA AA APT PT    AP
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRH-SSATAATAPTRPTPTAVAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFIS FSRIGTLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWD+VKFCGDRW LDKYP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVRIAQCVTVIILLFSNFQMAIFCALG+GYTG
Sbjct: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTG 216

[Close]

BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1FMA4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111446689 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.4e-107
Identity = 198/217 (91.24%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFS NPLSLSVPDGAFDSWLRDSGYLEI+DQRTSD+HRHSS+AAAAAAP T TSAPT P
Sbjct: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFISLFSRI TLLSIFTLNPF+KLSAADFSGPTPSWTSGF+G FESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLR HENAKRYARNYASLFVLFFVCTLYQMP+ALLGL+SC+ALWD+VKFC +RWGLDKYP
Sbjct: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVR+AQCVTVIILLFSNFQMAIFCALGIGYTG
Sbjct: 181 VVWQCLVRVAQCVTVIILLFSNFQMAIFCALGIGYTG 217

[Close]

BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.2e-105
Identity = 198/217 (91.24%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHRHSS    AA PT PT    AP
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS----AAPPTRPTPTAAAP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFISLFSRI TLLS+FTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWD+VKFC DRWGLDKYP
Sbjct: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           V+WQCLVRIAQC T IILLFSNFQMAIFCALGIGYTG
Sbjct: 181 VLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTG 213

[Close]

BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1J379 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111480937 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.5e-105
Identity = 194/217 (89.40%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAP 60
           MSFS NPLSLSVPD AFDSWLRDSGYLEI+DQRTSD+HRHSS+AAAAAAP T TSAPT P
Sbjct: 1   MSFSPNPLSLSVPDSAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTP 60

Query: 61  LATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
           LATGFFISLFSRI TL SIFTLNPF+KLSAADFSGP PSWTSGF+G FESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRIVTLFSIFTLNPFAKLSAADFSGPAPSWTSGFIGSFESYSFPSSPAQA 120

Query: 121 RLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYP 180
           RLR HENAKRYARNYASLFVLFFVCTLYQMP+ALLGL+SC+ALWD+VKFC +RWGLDKYP
Sbjct: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYP 180

Query: 181 VVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTG 218
           VVWQCLVR+AQCVTVIILLFSNFQ+AIFCALGIGYTG
Sbjct: 181 VVWQCLVRVAQCVTVIILLFSNFQIAIFCALGIGYTG 217

[Close]

BLAST of Spg016207 vs. TAIR 10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H )

HSP 1 Score: 246.1 bits (627), Expect = 3.2e-65
Identity = 126/220 (57.27%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPT-- 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RTS     +SS+A+ ++    TSA +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  --APLATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPFSKLSA DFSG T  WT+GF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW+L K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYT 217
           D++P + +  + I QC T ++L F N QMA+F AL I Y+
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYS 220

The following BLAST results are available for this feature:

BLAST of Spg016207 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591944.1	3.8e-108	93.55	PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG70248...	[more]
XP_038898448.1	1.4e-107	93.55	PRA1 family protein H [Benincasa hispida]	[more]
XP_022935725.1	3.2e-107	92.63	PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family prot...	[more]
XP_023535020.1	4.2e-107	92.63	PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 fam...	[more]
XP_022976569.1	4.2e-107	92.63	PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protei...	[more]

BLAST of Spg016207 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP1	4.5e-64	57.27	PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1	[more]

BLAST of Spg016207 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5I6	1.5e-107	92.63	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1	[more]
A0A6J1IMK5	2.0e-107	92.63	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1	[more]
A0A6J1FMA4	3.4e-107	91.24	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111446689 PE=3 SV=1	[more]
A0A1S3CLE4	3.2e-105	91.24	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1	[more]
A0A6J1J379	5.5e-105	89.40	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111480937 PE=3 SV=1	[more]

BLAST of Spg016207 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27540.1	3.2e-65	57.27	prenylated RAB acceptor 1.H	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 107..215 e-value: 2.3E-10 score: 40.3
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..217
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN H	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016207.1	Spg016207.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane