Spg016006 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg016006
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box domain-containing protein
Locationscaffold6: 42864906 .. 42866078 (+)
RNA-Seq ExpressionSpg016006
SyntenySpg016006
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTGTTCCGACTACTTTCGAGATTGGGCAGCACTTGAATATGGTATTCTTGGTCTGATTCTCAACAAAACGGTGTCGCTCTACGATTATCTTCACTTCAGCCTCGTTTGTAAGTCTTGGAATTTCATTGCATCACACTACAAACACCAAATATCCATAATTACTTCCAAGGTTCCTCAACTTCCCATGCTCATTGTCCCCTCGAAAGATGGTATCGAAAAACAACATTGTTTGTATGATCTGACAAGGAATGAAATTCGTCCGGTTGACTTCAAATTTCGCTTCAACAAAAAGTGTTGTGGTTCATCTTTTGGTTGGTTGATCATGCTCGAAGAGACACTTGATATTACTGTATTCAACCCTTTTTCTGGGAGTGTGGTTCATCTTCCTCCGATTATTATAGATGAAGAACCCGATTATTCTCTTGGACGCATAGTTAAAGCTATACTAACCAAAGATCCATCGTTATATCCAAATGATTACATGGTTGTAGCCATCTACAGTTCACTTTTTAGATTGTGTCTCATGAAAGCAAATGATAAATCTTGGACTTATTATTGCTGCCCAGACAAGAACATTCCTTTTGGAGATGTTAACGTTTGTAGCGGTACTTTATACGGATTGGATCTCAATATGAAACTTTATAAAATTGAAGTTGAGAATAGAGATGATGATATTCCATCCTTTTCAATTTCTTCAAGGATGATCACATCTATTTCTTCAAATTTGCAAGGTCAAACGTATGTTGTTGAGTCTTCCAAAGGAGAGCTTTTATTGGTTCAAAGATCATTGTGTAAAGAGGAGGAAGAACAACAAACGACTATCGAATTCGTAGTCTACAAACTTACTCATGTATGTGAAGATGGGACCCAAAGGCTTATAGAGGTGGAGAGTTTAGATGGTGATGCTATGTTTCTCGGTGACAGTCAGTCGACGTGCGTTTCAACTAAGGATTTTCCTCAATGTTTACCAAATCGAATATATTTTACAGATAGTTTTCAGTTCTTGACACGTACTCCTTTTTTAAATGGACCTCAAGATGCAGGTATATTCAACTTAGAAGATGGAAGTATTGGCGAACATTACATAACGGATCCCGCCCACAAAAAGTTGCCCCATCCCATATGGATCGTCCCCACAATATGCTCCGAGGGAAAGGAAAGTAAGTAG

mRNA sequence

ATGGATTGTTCCGACTACTTTCGAGATTGGGCAGCACTTGAATATGGTATTCTTGGTCTGATTCTCAACAAAACGGTGTCGCTCTACGATTATCTTCACTTCAGCCTCGTTTGTAAGTCTTGGAATTTCATTGCATCACACTACAAACACCAAATATCCATAATTACTTCCAAGGTTCCTCAACTTCCCATGCTCATTGTCCCCTCGAAAGATGGTATCGAAAAACAACATTGTTTGTATGATCTGACAAGGAATGAAATTCGTCCGGTTGACTTCAAATTTCGCTTCAACAAAAAGTGTTGTGGTTCATCTTTTGGTTGGTTGATCATGCTCGAAGAGACACTTGATATTACTGTATTCAACCCTTTTTCTGGGAGTGTGGTTCATCTTCCTCCGATTATTATAGATGAAGAACCCGATTATTCTCTTGGACGCATAGTTAAAGCTATACTAACCAAAGATCCATCGTTATATCCAAATGATTACATGGTTGTAGCCATCTACAGTTCACTTTTTAGATTGTGTCTCATGAAAGCAAATGATAAATCTTGGACTTATTATTGCTGCCCAGACAAGAACATTCCTTTTGGAGATGTTAACGTTTGTAGCGGTACTTTATACGGATTGGATCTCAATATGAAACTTTATAAAATTGAAGTTGAGAATAGAGATGATGATATTCCATCCTTTTCAATTTCTTCAAGGATGATCACATCTATTTCTTCAAATTTGCAAGGTCAAACGTATGTTGTTGAGTCTTCCAAAGGAGAGCTTTTATTGGTTCAAAGATCATTGTGTAAAGAGGAGGAAGAACAACAAACGACTATCGAATTCGTAGTCTACAAACTTACTCATGTATGTGAAGATGGGACCCAAAGGCTTATAGAGGTGGAGAGTTTAGATGGTGATGCTATGTTTCTCGGTGACAGTCAGTCGACGTGCGTTTCAACTAAGGATTTTCCTCAATGTTTACCAAATCGAATATATTTTACAGATAGTTTTCAGTTCTTGACACGTACTCCTTTTTTAAATGGACCTCAAGATGCAGGTATATTCAACTTAGAAGATGGAAGTATTGGCGAACATTACATAACGGATCCCGCCCACAAAAAGTTGCCCCATCCCATATGGATCGTCCCCACAATATGCTCCGAGGGAAAGGAAAGTAAGTAG

Coding sequence (CDS)

ATGGATTGTTCCGACTACTTTCGAGATTGGGCAGCACTTGAATATGGTATTCTTGGTCTGATTCTCAACAAAACGGTGTCGCTCTACGATTATCTTCACTTCAGCCTCGTTTGTAAGTCTTGGAATTTCATTGCATCACACTACAAACACCAAATATCCATAATTACTTCCAAGGTTCCTCAACTTCCCATGCTCATTGTCCCCTCGAAAGATGGTATCGAAAAACAACATTGTTTGTATGATCTGACAAGGAATGAAATTCGTCCGGTTGACTTCAAATTTCGCTTCAACAAAAAGTGTTGTGGTTCATCTTTTGGTTGGTTGATCATGCTCGAAGAGACACTTGATATTACTGTATTCAACCCTTTTTCTGGGAGTGTGGTTCATCTTCCTCCGATTATTATAGATGAAGAACCCGATTATTCTCTTGGACGCATAGTTAAAGCTATACTAACCAAAGATCCATCGTTATATCCAAATGATTACATGGTTGTAGCCATCTACAGTTCACTTTTTAGATTGTGTCTCATGAAAGCAAATGATAAATCTTGGACTTATTATTGCTGCCCAGACAAGAACATTCCTTTTGGAGATGTTAACGTTTGTAGCGGTACTTTATACGGATTGGATCTCAATATGAAACTTTATAAAATTGAAGTTGAGAATAGAGATGATGATATTCCATCCTTTTCAATTTCTTCAAGGATGATCACATCTATTTCTTCAAATTTGCAAGGTCAAACGTATGTTGTTGAGTCTTCCAAAGGAGAGCTTTTATTGGTTCAAAGATCATTGTGTAAAGAGGAGGAAGAACAACAAACGACTATCGAATTCGTAGTCTACAAACTTACTCATGTATGTGAAGATGGGACCCAAAGGCTTATAGAGGTGGAGAGTTTAGATGGTGATGCTATGTTTCTCGGTGACAGTCAGTCGACGTGCGTTTCAACTAAGGATTTTCCTCAATGTTTACCAAATCGAATATATTTTACAGATAGTTTTCAGTTCTTGACACGTACTCCTTTTTTAAATGGACCTCAAGATGCAGGTATATTCAACTTAGAAGATGGAAGTATTGGCGAACATTACATAACGGATCCCGCCCACAAAAAGTTGCCCCATCCCATATGGATCGTCCCCACAATATGCTCCGAGGGAAAGGAAAGTAAGTAG

Protein sequence

MDCSDYFRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIVPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSVVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYYCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDPAHKKLPHPIWIVPTICSEGKESK
Homology
BLAST of Spg016006 vs. NCBI nr
Match: KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 507.7 bits (1306), Expect = 9.0e-140
Identity = 248/382 (64.92%), Postives = 297/382 (77.75%), Query Frame = 0

Query: 7   FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
           FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A  +KHQ SIITSK PQLPMLI
Sbjct: 6   FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65

Query: 67  VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
           VPSKDG+E QHCLYD  +N  RPVDFKF FNK+CCGSSFGWLIM EETL++T+FNPFSG+
Sbjct: 66  VPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGT 125

Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
           V+ LP I ID+EPDY+  RIVKAILTKDPSLYPNDYMVVAIYSS  RLCLM+ANDKSWT 
Sbjct: 126 VICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185

Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
           Y  P+ NIPF D+NV S TLY  + NM ++K+EV+NRDD+  S SIS +M+ +  +N   
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245

Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
            +Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL   CE+   R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305

Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
           +GDSQS CVSTK FP+CLPN IYF + +         N  QD+GIFNLED     HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365

Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
           PAHK LP PIWI+PTICS+  E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381

BLAST of Spg016006 vs. NCBI nr
Match: XP_022923266.1 (probable F-box protein At1g65740 [Cucurbita moschata])

HSP 1 Score: 507.7 bits (1306), Expect = 9.0e-140
Identity = 248/382 (64.92%), Postives = 298/382 (78.01%), Query Frame = 0

Query: 7   FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
           FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A  +KHQ SIITSK PQLPMLI
Sbjct: 6   FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65

Query: 67  VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
           VPSK+G+EKQHCLYD  +N  RPVDFKF FNK+CCGSSFGWLIM EETL++T+FNPFSG+
Sbjct: 66  VPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGT 125

Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
           V+ LP I ID+EPDY+  RIVKAILTKDPSLYPNDYMVVAIYSS  RLCLM+ANDKSWT 
Sbjct: 126 VICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185

Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
           Y  P+ NIPF D+NV S TLY  + NM ++K+EV+NRDD+  S SIS +M+ +  +N   
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245

Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
            +Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL   CE+   R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305

Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
           +GDSQS CVSTK FP+CLPN IYF + +         N  QD+GIFNLED     HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365

Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
           PAHK LP PIWI+PTICS+  E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381

BLAST of Spg016006 vs. NCBI nr
Match: XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507.3 bits (1305), Expect = 1.2e-139
Identity = 248/382 (64.92%), Postives = 297/382 (77.75%), Query Frame = 0

Query: 7   FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
           FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A  +KHQ SIITSK PQLPMLI
Sbjct: 6   FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65

Query: 67  VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
           VPSKDG+EKQHCLYD  +N  RPVDFKF FNK+CCGSSFGWLIM EETLD+T+FNPFSG+
Sbjct: 66  VPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGT 125

Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
           V+ LP I I++EPDY+  RIVKAILTKDP LYPNDYMVVAIYSS  RLCLM+ANDKSWT 
Sbjct: 126 VICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185

Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
           Y  P+ NIPF D+NV S TLY  + NM ++K+EV+NRDD+  S SIS +M+ +  +N   
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245

Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
            +Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL   CE+   R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305

Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
           +GDSQS CVSTK FP+CLPN IYF + +         N  QD+GIFNLED     HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365

Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
           PAHK LP PIWI+PTICS+  E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381

BLAST of Spg016006 vs. NCBI nr
Match: XP_023552958.1 (probable F-box protein At4g22165 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-136
Identity = 237/378 (62.70%), Postives = 291/378 (76.98%), Query Frame = 0

Query: 8   RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
           RDW AL+Y +LG+ILNK VSLYDYL FSLVCKSW F+A  +KH+ SIITSKV QLPMLIV
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALRHKHERSIITSKVTQLPMLIV 66

Query: 68  PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
           PSKDG+EKQHCLYDLTRN +RPVDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67  PSKDGLEKQHCLYDLTRNIVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGTV 126

Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
           ++LPP+   ++ ++  G I+KAILTKDPSLYPNDYMVVAI+ +  RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKTWTYY 186

Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
             P  NIPF D+N+C  TLY  +  + ++K+EVEN +D+  S  IS +M+ +I       
Sbjct: 187 -YPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHWVT 246

Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
           +Y+ ESSKGELL+V R L    EEQ  T++F VYKL H  ED  +R +EV+SLDGDA+F+
Sbjct: 247 SYITESSKGELLVVLRIL-DSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGDAIFI 306

Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
           GDSQS CVSTK+FP+CLPNRIYFTD+         L+G QD G FN EDGS  + YI DP
Sbjct: 307 GDSQSICVSTKEFPECLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFEDGSFEDQYIADP 366

Query: 368 AHKKLPHPIWIVPTICSE 386
           A K LP PIWI+PTICS+
Sbjct: 367 AQKNLPSPIWIIPTICSK 382

BLAST of Spg016006 vs. NCBI nr
Match: XP_022923267.1 (probable F-box protein At1g65740 [Cucurbita moschata])

HSP 1 Score: 493.8 bits (1270), Expect = 1.4e-135
Identity = 233/378 (61.64%), Postives = 290/378 (76.72%), Query Frame = 0

Query: 8   RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
           RDW AL+Y +LG+ILNK VSLYDYL FSLVCKSW F+A H+KHQ SII SKVPQLPMLIV
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQLPMLIV 66

Query: 68  PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
           PSKDG+EKQHCLYDLT N +R VDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67  PSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGAV 126

Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
           ++LPP+   ++ ++  G I+KAILTKDPSLYPNDYMVV I+ +  RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWTYY 186

Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
             P  NIPF D+N+C  T+Y  + ++ ++K+EV+N +D+  S SIS +M+ +      G 
Sbjct: 187 -YPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRYIGT 246

Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
            Y+ ESSKGELL+V R +    EEQ  T++F VYKL H  ED  +R +EV+SLDGDA+F+
Sbjct: 247 AYITESSKGELLVVLR-IFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGDAIFI 306

Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
           GDSQS CVSTK+F  CLPNRIYFTD+         L+G QD G+FN EDGS  +HYI DP
Sbjct: 307 GDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIADP 366

Query: 368 AHKKLPHPIWIVPTICSE 386
           A K LP P+WI+PTICS+
Sbjct: 367 AQKNLPSPMWIIPTICSK 382

BLAST of Spg016006 vs. ExPASy Swiss-Prot
Match: Q3EBY8 (F-box protein At2g17690 OS=Arabidopsis thaliana OX=3702 GN=SDC PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.5e-04
Identity = 32/95 (33.68%), Postives = 46/95 (48.42%), Query Frame = 0

Query: 266 CKE-EEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCL 325
           CK  E +   TI F VYK     ++   + +EV+SL   A+ +       VS  +F  CL
Sbjct: 323 CKPFERDPPKTIGFKVYK----NDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCL 382

Query: 326 PNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSI 360
           PN IYFTD  +           ++  +F L+DGSI
Sbjct: 383 PNSIYFTDKKE-----------EEVKVFKLDDGSI 402

BLAST of Spg016006 vs. ExPASy TrEMBL
Match: A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 4.4e-140
Identity = 248/382 (64.92%), Postives = 298/382 (78.01%), Query Frame = 0

Query: 7   FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
           FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A  +KHQ SIITSK PQLPMLI
Sbjct: 6   FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65

Query: 67  VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
           VPSK+G+EKQHCLYD  +N  RPVDFKF FNK+CCGSSFGWLIM EETL++T+FNPFSG+
Sbjct: 66  VPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGT 125

Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
           V+ LP I ID+EPDY+  RIVKAILTKDPSLYPNDYMVVAIYSS  RLCLM+ANDKSWT 
Sbjct: 126 VICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185

Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
           Y  P+ NIPF D+NV S TLY  + NM ++K+EV+NRDD+  S SIS +M+ +  +N   
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245

Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
            +Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL   CE+   R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305

Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
           +GDSQS CVSTK FP+CLPN IYF + +         N  QD+GIFNLED     HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365

Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
           PAHK LP PIWI+PTICS+  E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381

BLAST of Spg016006 vs. ExPASy TrEMBL
Match: A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 6.5e-136
Identity = 233/378 (61.64%), Postives = 290/378 (76.72%), Query Frame = 0

Query: 8   RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
           RDW AL+Y +LG+ILNK VSLYDYL FSLVCKSW F+A H+KHQ SII SKVPQLPMLIV
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQLPMLIV 66

Query: 68  PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
           PSKDG+EKQHCLYDLT N +R VDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67  PSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGAV 126

Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
           ++LPP+   ++ ++  G I+KAILTKDPSLYPNDYMVV I+ +  RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWTYY 186

Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
             P  NIPF D+N+C  T+Y  + ++ ++K+EV+N +D+  S SIS +M+ +      G 
Sbjct: 187 -YPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRYIGT 246

Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
            Y+ ESSKGELL+V R +    EEQ  T++F VYKL H  ED  +R +EV+SLDGDA+F+
Sbjct: 247 AYITESSKGELLVVLR-IFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGDAIFI 306

Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
           GDSQS CVSTK+F  CLPNRIYFTD+         L+G QD G+FN EDGS  +HYI DP
Sbjct: 307 GDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIADP 366

Query: 368 AHKKLPHPIWIVPTICSE 386
           A K LP P+WI+PTICS+
Sbjct: 367 AQKNLPSPMWIIPTICSK 382

BLAST of Spg016006 vs. ExPASy TrEMBL
Match: A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 1.1e-135
Identity = 235/378 (62.17%), Postives = 290/378 (76.72%), Query Frame = 0

Query: 8   RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
           RDW AL+Y +LG+ILNK VSLYDYL F+LVCKSW F+A  +KH+ SIITSKV QLPMLIV
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQLPMLIV 66

Query: 68  PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
           PSKDG+EKQHCLYDLTRN +RPVDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67  PSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGTV 126

Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
           ++LPP+   ++ ++  G I+KAILTKDPSLYPNDYMVVAI+ +  RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKTWTYY 186

Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
             P  NIPF D+N+C  TLY  +  + ++K+EVEN +D+  S  IS +M+ +I       
Sbjct: 187 -YPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHLVT 246

Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
           +Y+ ESSKGELL+V R L    EEQ  T++F VYKL H  ED  +R +EV+SLDGDA+F+
Sbjct: 247 SYITESSKGELLVVLRIL-DSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGDAIFI 306

Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
           GDSQS CVSTK+FP CLPNRIYFTD+         L+G QD G FN E+GS  + YI DP
Sbjct: 307 GDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQYIADP 366

Query: 368 AHKKLPHPIWIVPTICSE 386
           A K LP PIWI+PTICS+
Sbjct: 367 AQKNLPSPIWIIPTICSK 382

BLAST of Spg016006 vs. ExPASy TrEMBL
Match: A0A6J1E6A0 (uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC111431103 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 8.0e-126
Identity = 227/360 (63.06%), Postives = 276/360 (76.67%), Query Frame = 0

Query: 26  VSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIVPSKDGIEKQHCLYDLTRN 85
           VSLYDYL FSLVCKSW F+A  +KHQ SIITSK PQLPMLIVPSKDG+EKQHCLYD  +N
Sbjct: 2   VSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRKN 61

Query: 86  EIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSVVHLPPIIIDEEPDYSLGR 145
             RPVDFKF FNK+CCGSSFGWLIM EETLD+T+FNPFSG+V+ LP I I++EPDY+  R
Sbjct: 62  RTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPDR 121

Query: 146 IVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYYCCPDKNIPFGDVNVCSGT 205
           IVKAILTKDPSLYPNDYMVVAIY S  +LCLM++NDKSWTYY  P+ NIPF DVNV   T
Sbjct: 122 IVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYY-YPEPNIPFSDVNVYGDT 181

Query: 206 LYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQTYVVESSKGELLLVQRSL 265
           +Y   ++M ++K+EV+ R+D+    SIS R + + S +   ++ +  SSKGELLLV RS+
Sbjct: 182 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 241

Query: 266 CKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCLP 325
             EE + +T  +F VYKLT   E+G ++ I+V+SLDGDAMF+GDSQS CVSTKDF +CLP
Sbjct: 242 SVEETQLETN-KFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLP 301

Query: 326 NRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDPAHKKLPHPIWIVPTICSE 385
           N IYF +   +       N  QD+GIF LED   G+HYI DP H+ LP PIWI+PTICS+
Sbjct: 302 NCIYFMNGCNYCVP----NLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSK 355

BLAST of Spg016006 vs. ExPASy TrEMBL
Match: A0A1S3BM31 (uncharacterized protein LOC103491129 OS=Cucumis melo OX=3656 GN=LOC103491129 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 1.4e-125
Identity = 238/399 (59.65%), Postives = 294/399 (73.68%), Query Frame = 0

Query: 1   MDCSDYFRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVP 60
           MDCS+  RDW  LEY ILG+ILNK +SLYDYL FSLVCKSWNF+A  +KHQ S+ITS+ P
Sbjct: 1   MDCSE-SRDWTTLEYDILGVILNKMMSLYDYLQFSLVCKSWNFVALRHKHQRSVITSEFP 60

Query: 61  QLPMLIVPS-KDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITV 120
           QLPMLIVPS KDGIEKQHCLYD+T N+IR  DFKF FNK+CCGSSFGWLIM EET D+T+
Sbjct: 61  QLPMLIVPSIKDGIEKQHCLYDVTNNKIRTADFKFCFNKRCCGSSFGWLIMHEETFDVTL 120

Query: 121 FNPFSGSVVHLPPIIID-EEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMK 180
           FNPFSG+V+ LPP+  + E+ DY    I+KAILTKDPSLYPNDYMVVAIY    +LCL++
Sbjct: 121 FNPFSGTVIRLPPLPKEHEDDDYYPWYILKAILTKDPSLYPNDYMVVAIYGISTKLCLIE 180

Query: 181 ANDKSWTYYCCP---DKNIPFGDVNVCSGTLYGL---DLNMKLYKIEVENRDDDIPSFSI 240
           A  K W  Y  P   D N PF DV VC+ TLY     D+ + L+K+EV+  +  I    +
Sbjct: 181 AKSKIWKKYDIPPGQDYN-PFEDVYVCNDTLYASHLDDVQLNLWKVEVD-ENSPISLQRV 240

Query: 241 SSRMITSISSNLQGQTYVVESSKGELLLVQRSLCKEEEEQQ---------TTIEFVVYKL 300
           +  +  S+S++  G  ++VESSK ELLL++R L  E+ EQ           TI+FV YK 
Sbjct: 241 AIILQPSLSTHDFGPMFIVESSKKELLLIRRILSVEDHEQPDSDITTTLVKTIKFVAYKH 300

Query: 301 THVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFL 360
           TH C DGTQR  EV+SLD DA+F+G+ QS C+STK+FP+CLPN IY+TD+ ++ +  PF+
Sbjct: 301 THTCNDGTQRFEEVKSLDDDAVFIGE-QSICISTKNFPKCLPNCIYYTDN-RYYSHDPFV 360

Query: 361 NGPQDAGIFNLEDGSIGEHYITDPAHKKLPHPIWIVPTI 383
           NGPQD GI+NLEDGS GEHYI + AH+ LP PIWIVPTI
Sbjct: 361 NGPQDIGIYNLEDGSFGEHYIPNIAHQNLPSPIWIVPTI 394

BLAST of Spg016006 vs. TAIR 10
Match: AT2G17690.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 46.6 bits (109), Expect = 5.3e-05
Identity = 32/95 (33.68%), Postives = 46/95 (48.42%), Query Frame = 0

Query: 266 CKE-EEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCL 325
           CK  E +   TI F VYK     ++   + +EV+SL   A+ +       VS  +F  CL
Sbjct: 323 CKPFERDPPKTIGFKVYK----NDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCL 382

Query: 326 PNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSI 360
           PN IYFTD  +           ++  +F L+DGSI
Sbjct: 383 PNSIYFTDKKE-----------EEVKVFKLDDGSI 402

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6577578.19.0e-14064.92putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022923266.19.0e-14064.92probable F-box protein At1g65740 [Cucurbita moschata][more]
XP_023552957.11.2e-13964.92probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo][more]
XP_023552958.11.2e-13662.70probable F-box protein At4g22165 [Cucurbita pepo subsp. pepo][more]
XP_022923267.11.4e-13561.64probable F-box protein At1g65740 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q3EBY87.5e-0433.68F-box protein At2g17690 OS=Arabidopsis thaliana OX=3702 GN=SDC PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1E6C74.4e-14064.92probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... [more]
A0A6J1E5P56.5e-13661.64probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... [more]
A0A6J1E9231.1e-13562.17probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... [more]
A0A6J1E6A08.0e-12663.06uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A1S3BM311.4e-12559.65uncharacterized protein LOC103491129 OS=Cucumis melo OX=3656 GN=LOC103491129 PE=... [more]
Match NameE-valueIdentityDescription
AT2G17690.15.3e-0533.68F-box family protein with a domain of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 296..354
e-value: 5.2E-13
score: 48.4
NoneNo IPR availablePANTHERPTHR44259OS07G0183000 PROTEIN-RELATEDcoord: 8..380
NoneNo IPR availablePANTHERPTHR44259:SF18UBIQUITIN-PROTEIN LIGASEcoord: 8..380

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg016006.1Spg016006.1mRNA