Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTGTTCCGACTACTTTCGAGATTGGGCAGCACTTGAATATGGTATTCTTGGTCTGATTCTCAACAAAACGGTGTCGCTCTACGATTATCTTCACTTCAGCCTCGTTTGTAAGTCTTGGAATTTCATTGCATCACACTACAAACACCAAATATCCATAATTACTTCCAAGGTTCCTCAACTTCCCATGCTCATTGTCCCCTCGAAAGATGGTATCGAAAAACAACATTGTTTGTATGATCTGACAAGGAATGAAATTCGTCCGGTTGACTTCAAATTTCGCTTCAACAAAAAGTGTTGTGGTTCATCTTTTGGTTGGTTGATCATGCTCGAAGAGACACTTGATATTACTGTATTCAACCCTTTTTCTGGGAGTGTGGTTCATCTTCCTCCGATTATTATAGATGAAGAACCCGATTATTCTCTTGGACGCATAGTTAAAGCTATACTAACCAAAGATCCATCGTTATATCCAAATGATTACATGGTTGTAGCCATCTACAGTTCACTTTTTAGATTGTGTCTCATGAAAGCAAATGATAAATCTTGGACTTATTATTGCTGCCCAGACAAGAACATTCCTTTTGGAGATGTTAACGTTTGTAGCGGTACTTTATACGGATTGGATCTCAATATGAAACTTTATAAAATTGAAGTTGAGAATAGAGATGATGATATTCCATCCTTTTCAATTTCTTCAAGGATGATCACATCTATTTCTTCAAATTTGCAAGGTCAAACGTATGTTGTTGAGTCTTCCAAAGGAGAGCTTTTATTGGTTCAAAGATCATTGTGTAAAGAGGAGGAAGAACAACAAACGACTATCGAATTCGTAGTCTACAAACTTACTCATGTATGTGAAGATGGGACCCAAAGGCTTATAGAGGTGGAGAGTTTAGATGGTGATGCTATGTTTCTCGGTGACAGTCAGTCGACGTGCGTTTCAACTAAGGATTTTCCTCAATGTTTACCAAATCGAATATATTTTACAGATAGTTTTCAGTTCTTGACACGTACTCCTTTTTTAAATGGACCTCAAGATGCAGGTATATTCAACTTAGAAGATGGAAGTATTGGCGAACATTACATAACGGATCCCGCCCACAAAAAGTTGCCCCATCCCATATGGATCGTCCCCACAATATGCTCCGAGGGAAAGGAAAGTAAGTAG
mRNA sequence
ATGGATTGTTCCGACTACTTTCGAGATTGGGCAGCACTTGAATATGGTATTCTTGGTCTGATTCTCAACAAAACGGTGTCGCTCTACGATTATCTTCACTTCAGCCTCGTTTGTAAGTCTTGGAATTTCATTGCATCACACTACAAACACCAAATATCCATAATTACTTCCAAGGTTCCTCAACTTCCCATGCTCATTGTCCCCTCGAAAGATGGTATCGAAAAACAACATTGTTTGTATGATCTGACAAGGAATGAAATTCGTCCGGTTGACTTCAAATTTCGCTTCAACAAAAAGTGTTGTGGTTCATCTTTTGGTTGGTTGATCATGCTCGAAGAGACACTTGATATTACTGTATTCAACCCTTTTTCTGGGAGTGTGGTTCATCTTCCTCCGATTATTATAGATGAAGAACCCGATTATTCTCTTGGACGCATAGTTAAAGCTATACTAACCAAAGATCCATCGTTATATCCAAATGATTACATGGTTGTAGCCATCTACAGTTCACTTTTTAGATTGTGTCTCATGAAAGCAAATGATAAATCTTGGACTTATTATTGCTGCCCAGACAAGAACATTCCTTTTGGAGATGTTAACGTTTGTAGCGGTACTTTATACGGATTGGATCTCAATATGAAACTTTATAAAATTGAAGTTGAGAATAGAGATGATGATATTCCATCCTTTTCAATTTCTTCAAGGATGATCACATCTATTTCTTCAAATTTGCAAGGTCAAACGTATGTTGTTGAGTCTTCCAAAGGAGAGCTTTTATTGGTTCAAAGATCATTGTGTAAAGAGGAGGAAGAACAACAAACGACTATCGAATTCGTAGTCTACAAACTTACTCATGTATGTGAAGATGGGACCCAAAGGCTTATAGAGGTGGAGAGTTTAGATGGTGATGCTATGTTTCTCGGTGACAGTCAGTCGACGTGCGTTTCAACTAAGGATTTTCCTCAATGTTTACCAAATCGAATATATTTTACAGATAGTTTTCAGTTCTTGACACGTACTCCTTTTTTAAATGGACCTCAAGATGCAGGTATATTCAACTTAGAAGATGGAAGTATTGGCGAACATTACATAACGGATCCCGCCCACAAAAAGTTGCCCCATCCCATATGGATCGTCCCCACAATATGCTCCGAGGGAAAGGAAAGTAAGTAG
Coding sequence (CDS)
ATGGATTGTTCCGACTACTTTCGAGATTGGGCAGCACTTGAATATGGTATTCTTGGTCTGATTCTCAACAAAACGGTGTCGCTCTACGATTATCTTCACTTCAGCCTCGTTTGTAAGTCTTGGAATTTCATTGCATCACACTACAAACACCAAATATCCATAATTACTTCCAAGGTTCCTCAACTTCCCATGCTCATTGTCCCCTCGAAAGATGGTATCGAAAAACAACATTGTTTGTATGATCTGACAAGGAATGAAATTCGTCCGGTTGACTTCAAATTTCGCTTCAACAAAAAGTGTTGTGGTTCATCTTTTGGTTGGTTGATCATGCTCGAAGAGACACTTGATATTACTGTATTCAACCCTTTTTCTGGGAGTGTGGTTCATCTTCCTCCGATTATTATAGATGAAGAACCCGATTATTCTCTTGGACGCATAGTTAAAGCTATACTAACCAAAGATCCATCGTTATATCCAAATGATTACATGGTTGTAGCCATCTACAGTTCACTTTTTAGATTGTGTCTCATGAAAGCAAATGATAAATCTTGGACTTATTATTGCTGCCCAGACAAGAACATTCCTTTTGGAGATGTTAACGTTTGTAGCGGTACTTTATACGGATTGGATCTCAATATGAAACTTTATAAAATTGAAGTTGAGAATAGAGATGATGATATTCCATCCTTTTCAATTTCTTCAAGGATGATCACATCTATTTCTTCAAATTTGCAAGGTCAAACGTATGTTGTTGAGTCTTCCAAAGGAGAGCTTTTATTGGTTCAAAGATCATTGTGTAAAGAGGAGGAAGAACAACAAACGACTATCGAATTCGTAGTCTACAAACTTACTCATGTATGTGAAGATGGGACCCAAAGGCTTATAGAGGTGGAGAGTTTAGATGGTGATGCTATGTTTCTCGGTGACAGTCAGTCGACGTGCGTTTCAACTAAGGATTTTCCTCAATGTTTACCAAATCGAATATATTTTACAGATAGTTTTCAGTTCTTGACACGTACTCCTTTTTTAAATGGACCTCAAGATGCAGGTATATTCAACTTAGAAGATGGAAGTATTGGCGAACATTACATAACGGATCCCGCCCACAAAAAGTTGCCCCATCCCATATGGATCGTCCCCACAATATGCTCCGAGGGAAAGGAAAGTAAGTAG
Protein sequence
MDCSDYFRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIVPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSVVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYYCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDPAHKKLPHPIWIVPTICSEGKESK
Homology
BLAST of Spg016006 vs. NCBI nr
Match:
KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 507.7 bits (1306), Expect = 9.0e-140
Identity = 248/382 (64.92%), Postives = 297/382 (77.75%), Query Frame = 0
Query: 7 FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A +KHQ SIITSK PQLPMLI
Sbjct: 6 FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65
Query: 67 VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
VPSKDG+E QHCLYD +N RPVDFKF FNK+CCGSSFGWLIM EETL++T+FNPFSG+
Sbjct: 66 VPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGT 125
Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
V+ LP I ID+EPDY+ RIVKAILTKDPSLYPNDYMVVAIYSS RLCLM+ANDKSWT
Sbjct: 126 VICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185
Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
Y P+ NIPF D+NV S TLY + NM ++K+EV+NRDD+ S SIS +M+ + +N
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245
Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
+Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL CE+ R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305
Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
+GDSQS CVSTK FP+CLPN IYF + + N QD+GIFNLED HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365
Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
PAHK LP PIWI+PTICS+ E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381
BLAST of Spg016006 vs. NCBI nr
Match:
XP_022923266.1 (probable F-box protein At1g65740 [Cucurbita moschata])
HSP 1 Score: 507.7 bits (1306), Expect = 9.0e-140
Identity = 248/382 (64.92%), Postives = 298/382 (78.01%), Query Frame = 0
Query: 7 FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A +KHQ SIITSK PQLPMLI
Sbjct: 6 FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65
Query: 67 VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
VPSK+G+EKQHCLYD +N RPVDFKF FNK+CCGSSFGWLIM EETL++T+FNPFSG+
Sbjct: 66 VPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGT 125
Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
V+ LP I ID+EPDY+ RIVKAILTKDPSLYPNDYMVVAIYSS RLCLM+ANDKSWT
Sbjct: 126 VICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185
Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
Y P+ NIPF D+NV S TLY + NM ++K+EV+NRDD+ S SIS +M+ + +N
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245
Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
+Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL CE+ R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305
Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
+GDSQS CVSTK FP+CLPN IYF + + N QD+GIFNLED HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365
Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
PAHK LP PIWI+PTICS+ E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381
BLAST of Spg016006 vs. NCBI nr
Match:
XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 507.3 bits (1305), Expect = 1.2e-139
Identity = 248/382 (64.92%), Postives = 297/382 (77.75%), Query Frame = 0
Query: 7 FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A +KHQ SIITSK PQLPMLI
Sbjct: 6 FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65
Query: 67 VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
VPSKDG+EKQHCLYD +N RPVDFKF FNK+CCGSSFGWLIM EETLD+T+FNPFSG+
Sbjct: 66 VPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGT 125
Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
V+ LP I I++EPDY+ RIVKAILTKDP LYPNDYMVVAIYSS RLCLM+ANDKSWT
Sbjct: 126 VICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185
Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
Y P+ NIPF D+NV S TLY + NM ++K+EV+NRDD+ S SIS +M+ + +N
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245
Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
+Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL CE+ R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305
Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
+GDSQS CVSTK FP+CLPN IYF + + N QD+GIFNLED HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365
Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
PAHK LP PIWI+PTICS+ E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381
BLAST of Spg016006 vs. NCBI nr
Match:
XP_023552958.1 (probable F-box protein At4g22165 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-136
Identity = 237/378 (62.70%), Postives = 291/378 (76.98%), Query Frame = 0
Query: 8 RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
RDW AL+Y +LG+ILNK VSLYDYL FSLVCKSW F+A +KH+ SIITSKV QLPMLIV
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALRHKHERSIITSKVTQLPMLIV 66
Query: 68 PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
PSKDG+EKQHCLYDLTRN +RPVDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67 PSKDGLEKQHCLYDLTRNIVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGTV 126
Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
++LPP+ ++ ++ G I+KAILTKDPSLYPNDYMVVAI+ + RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKTWTYY 186
Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
P NIPF D+N+C TLY + + ++K+EVEN +D+ S IS +M+ +I
Sbjct: 187 -YPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHWVT 246
Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
+Y+ ESSKGELL+V R L EEQ T++F VYKL H ED +R +EV+SLDGDA+F+
Sbjct: 247 SYITESSKGELLVVLRIL-DSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGDAIFI 306
Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
GDSQS CVSTK+FP+CLPNRIYFTD+ L+G QD G FN EDGS + YI DP
Sbjct: 307 GDSQSICVSTKEFPECLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFEDGSFEDQYIADP 366
Query: 368 AHKKLPHPIWIVPTICSE 386
A K LP PIWI+PTICS+
Sbjct: 367 AQKNLPSPIWIIPTICSK 382
BLAST of Spg016006 vs. NCBI nr
Match:
XP_022923267.1 (probable F-box protein At1g65740 [Cucurbita moschata])
HSP 1 Score: 493.8 bits (1270), Expect = 1.4e-135
Identity = 233/378 (61.64%), Postives = 290/378 (76.72%), Query Frame = 0
Query: 8 RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
RDW AL+Y +LG+ILNK VSLYDYL FSLVCKSW F+A H+KHQ SII SKVPQLPMLIV
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQLPMLIV 66
Query: 68 PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
PSKDG+EKQHCLYDLT N +R VDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67 PSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGAV 126
Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
++LPP+ ++ ++ G I+KAILTKDPSLYPNDYMVV I+ + RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWTYY 186
Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
P NIPF D+N+C T+Y + ++ ++K+EV+N +D+ S SIS +M+ + G
Sbjct: 187 -YPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRYIGT 246
Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
Y+ ESSKGELL+V R + EEQ T++F VYKL H ED +R +EV+SLDGDA+F+
Sbjct: 247 AYITESSKGELLVVLR-IFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGDAIFI 306
Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
GDSQS CVSTK+F CLPNRIYFTD+ L+G QD G+FN EDGS +HYI DP
Sbjct: 307 GDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIADP 366
Query: 368 AHKKLPHPIWIVPTICSE 386
A K LP P+WI+PTICS+
Sbjct: 367 AQKNLPSPMWIIPTICSK 382
BLAST of Spg016006 vs. ExPASy Swiss-Prot
Match:
Q3EBY8 (F-box protein At2g17690 OS=Arabidopsis thaliana OX=3702 GN=SDC PE=2 SV=1)
HSP 1 Score: 46.6 bits (109), Expect = 7.5e-04
Identity = 32/95 (33.68%), Postives = 46/95 (48.42%), Query Frame = 0
Query: 266 CKE-EEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCL 325
CK E + TI F VYK ++ + +EV+SL A+ + VS +F CL
Sbjct: 323 CKPFERDPPKTIGFKVYK----NDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCL 382
Query: 326 PNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSI 360
PN IYFTD + ++ +F L+DGSI
Sbjct: 383 PNSIYFTDKKE-----------EEVKVFKLDDGSI 402
BLAST of Spg016006 vs. ExPASy TrEMBL
Match:
A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)
HSP 1 Score: 507.7 bits (1306), Expect = 4.4e-140
Identity = 248/382 (64.92%), Postives = 298/382 (78.01%), Query Frame = 0
Query: 7 FRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLI 66
FRDW AL+Y +LG+ILNK VSLYDYL FS+VCKSW F+A +KHQ SIITSK PQLPMLI
Sbjct: 6 FRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLI 65
Query: 67 VPSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGS 126
VPSK+G+EKQHCLYD +N RPVDFKF FNK+CCGSSFGWLIM EETL++T+FNPFSG+
Sbjct: 66 VPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGT 125
Query: 127 VVHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTY 186
V+ LP I ID+EPDY+ RIVKAILTKDPSLYPNDYMVVAIYSS RLCLM+ANDKSWT
Sbjct: 126 VICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT- 185
Query: 187 YCCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQG 246
Y P+ NIPF D+NV S TLY + NM ++K+EV+NRDD+ S SIS +M+ + +N
Sbjct: 186 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 245
Query: 247 QTYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMF 306
+Y+ ESSKGELLLV RS+ +E+ + +TT +F VYKL CE+ R ++++SLDGDAMF
Sbjct: 246 VSYITESSKGELLLVLRSISEEDSQLETT-KFKVYKLIDECENDMLRAVKLKSLDGDAMF 305
Query: 307 LGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITD 366
+GDSQS CVSTK FP+CLPN IYF + + N QD+GIFNLED HYI D
Sbjct: 306 IGDSQSICVSTKYFPKCLPNCIYFINGYY----NYIPNLEQDSGIFNLEDKRFANHYIRD 365
Query: 367 PAHKKLPHPIWIVPTICSEGKE 389
PAHK LP PIWI+PTICS+ E
Sbjct: 366 PAHKNLPQPIWIIPTICSKDFE 381
BLAST of Spg016006 vs. ExPASy TrEMBL
Match:
A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)
HSP 1 Score: 493.8 bits (1270), Expect = 6.5e-136
Identity = 233/378 (61.64%), Postives = 290/378 (76.72%), Query Frame = 0
Query: 8 RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
RDW AL+Y +LG+ILNK VSLYDYL FSLVCKSW F+A H+KHQ SII SKVPQLPMLIV
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQLPMLIV 66
Query: 68 PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
PSKDG+EKQHCLYDLT N +R VDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67 PSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGAV 126
Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
++LPP+ ++ ++ G I+KAILTKDPSLYPNDYMVV I+ + RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWTYY 186
Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
P NIPF D+N+C T+Y + ++ ++K+EV+N +D+ S SIS +M+ + G
Sbjct: 187 -YPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRYIGT 246
Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
Y+ ESSKGELL+V R + EEQ T++F VYKL H ED +R +EV+SLDGDA+F+
Sbjct: 247 AYITESSKGELLVVLR-IFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGDAIFI 306
Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
GDSQS CVSTK+F CLPNRIYFTD+ L+G QD G+FN EDGS +HYI DP
Sbjct: 307 GDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIADP 366
Query: 368 AHKKLPHPIWIVPTICSE 386
A K LP P+WI+PTICS+
Sbjct: 367 AQKNLPSPMWIIPTICSK 382
BLAST of Spg016006 vs. ExPASy TrEMBL
Match:
A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)
HSP 1 Score: 493.0 bits (1268), Expect = 1.1e-135
Identity = 235/378 (62.17%), Postives = 290/378 (76.72%), Query Frame = 0
Query: 8 RDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIV 67
RDW AL+Y +LG+ILNK VSLYDYL F+LVCKSW F+A +KH+ SIITSKV QLPMLIV
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQLPMLIV 66
Query: 68 PSKDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSV 127
PSKDG+EKQHCLYDLTRN +RPVDFKF FNK+CCGSSFGWLIM +ETL I +FNPFSG+V
Sbjct: 67 PSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGTV 126
Query: 128 VHLPPIIIDEEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYY 187
++LPP+ ++ ++ G I+KAILTKDPSLYPNDYMVVAI+ + RLCL++ANDK+WTYY
Sbjct: 127 IYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKTWTYY 186
Query: 188 CCPDKNIPFGDVNVCSGTLYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQ 247
P NIPF D+N+C TLY + + ++K+EVEN +D+ S IS +M+ +I
Sbjct: 187 -YPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHLVT 246
Query: 248 TYVVESSKGELLLVQRSLCKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFL 307
+Y+ ESSKGELL+V R L EEQ T++F VYKL H ED +R +EV+SLDGDA+F+
Sbjct: 247 SYITESSKGELLVVLRIL-DSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGDAIFI 306
Query: 308 GDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDP 367
GDSQS CVSTK+FP CLPNRIYFTD+ L+G QD G FN E+GS + YI DP
Sbjct: 307 GDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQYIADP 366
Query: 368 AHKKLPHPIWIVPTICSE 386
A K LP PIWI+PTICS+
Sbjct: 367 AQKNLPSPIWIIPTICSK 382
BLAST of Spg016006 vs. ExPASy TrEMBL
Match:
A0A6J1E6A0 (uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC111431103 PE=4 SV=1)
HSP 1 Score: 460.3 bits (1183), Expect = 8.0e-126
Identity = 227/360 (63.06%), Postives = 276/360 (76.67%), Query Frame = 0
Query: 26 VSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVPQLPMLIVPSKDGIEKQHCLYDLTRN 85
VSLYDYL FSLVCKSW F+A +KHQ SIITSK PQLPMLIVPSKDG+EKQHCLYD +N
Sbjct: 2 VSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRKN 61
Query: 86 EIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITVFNPFSGSVVHLPPIIIDEEPDYSLGR 145
RPVDFKF FNK+CCGSSFGWLIM EETLD+T+FNPFSG+V+ LP I I++EPDY+ R
Sbjct: 62 RTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPDR 121
Query: 146 IVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMKANDKSWTYYCCPDKNIPFGDVNVCSGT 205
IVKAILTKDPSLYPNDYMVVAIY S +LCLM++NDKSWTYY P+ NIPF DVNV T
Sbjct: 122 IVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYY-YPEPNIPFSDVNVYGDT 181
Query: 206 LYGLDLNMKLYKIEVENRDDDIPSFSISSRMITSISSNLQGQTYVVESSKGELLLVQRSL 265
+Y ++M ++K+EV+ R+D+ SIS R + + S + ++ + SSKGELLLV RS+
Sbjct: 182 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 241
Query: 266 CKEEEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCLP 325
EE + +T +F VYKLT E+G ++ I+V+SLDGDAMF+GDSQS CVSTKDF +CLP
Sbjct: 242 SVEETQLETN-KFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLP 301
Query: 326 NRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSIGEHYITDPAHKKLPHPIWIVPTICSE 385
N IYF + + N QD+GIF LED G+HYI DP H+ LP PIWI+PTICS+
Sbjct: 302 NCIYFMNGCNYCVP----NLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSK 355
BLAST of Spg016006 vs. ExPASy TrEMBL
Match:
A0A1S3BM31 (uncharacterized protein LOC103491129 OS=Cucumis melo OX=3656 GN=LOC103491129 PE=4 SV=1)
HSP 1 Score: 459.5 bits (1181), Expect = 1.4e-125
Identity = 238/399 (59.65%), Postives = 294/399 (73.68%), Query Frame = 0
Query: 1 MDCSDYFRDWAALEYGILGLILNKTVSLYDYLHFSLVCKSWNFIASHYKHQISIITSKVP 60
MDCS+ RDW LEY ILG+ILNK +SLYDYL FSLVCKSWNF+A +KHQ S+ITS+ P
Sbjct: 1 MDCSE-SRDWTTLEYDILGVILNKMMSLYDYLQFSLVCKSWNFVALRHKHQRSVITSEFP 60
Query: 61 QLPMLIVPS-KDGIEKQHCLYDLTRNEIRPVDFKFRFNKKCCGSSFGWLIMLEETLDITV 120
QLPMLIVPS KDGIEKQHCLYD+T N+IR DFKF FNK+CCGSSFGWLIM EET D+T+
Sbjct: 61 QLPMLIVPSIKDGIEKQHCLYDVTNNKIRTADFKFCFNKRCCGSSFGWLIMHEETFDVTL 120
Query: 121 FNPFSGSVVHLPPIIID-EEPDYSLGRIVKAILTKDPSLYPNDYMVVAIYSSLFRLCLMK 180
FNPFSG+V+ LPP+ + E+ DY I+KAILTKDPSLYPNDYMVVAIY +LCL++
Sbjct: 121 FNPFSGTVIRLPPLPKEHEDDDYYPWYILKAILTKDPSLYPNDYMVVAIYGISTKLCLIE 180
Query: 181 ANDKSWTYYCCP---DKNIPFGDVNVCSGTLYGL---DLNMKLYKIEVENRDDDIPSFSI 240
A K W Y P D N PF DV VC+ TLY D+ + L+K+EV+ + I +
Sbjct: 181 AKSKIWKKYDIPPGQDYN-PFEDVYVCNDTLYASHLDDVQLNLWKVEVD-ENSPISLQRV 240
Query: 241 SSRMITSISSNLQGQTYVVESSKGELLLVQRSLCKEEEEQQ---------TTIEFVVYKL 300
+ + S+S++ G ++VESSK ELLL++R L E+ EQ TI+FV YK
Sbjct: 241 AIILQPSLSTHDFGPMFIVESSKKELLLIRRILSVEDHEQPDSDITTTLVKTIKFVAYKH 300
Query: 301 THVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCLPNRIYFTDSFQFLTRTPFL 360
TH C DGTQR EV+SLD DA+F+G+ QS C+STK+FP+CLPN IY+TD+ ++ + PF+
Sbjct: 301 THTCNDGTQRFEEVKSLDDDAVFIGE-QSICISTKNFPKCLPNCIYYTDN-RYYSHDPFV 360
Query: 361 NGPQDAGIFNLEDGSIGEHYITDPAHKKLPHPIWIVPTI 383
NGPQD GI+NLEDGS GEHYI + AH+ LP PIWIVPTI
Sbjct: 361 NGPQDIGIYNLEDGSFGEHYIPNIAHQNLPSPIWIVPTI 394
BLAST of Spg016006 vs. TAIR 10
Match:
AT2G17690.1 (F-box family protein with a domain of unknown function (DUF295) )
HSP 1 Score: 46.6 bits (109), Expect = 5.3e-05
Identity = 32/95 (33.68%), Postives = 46/95 (48.42%), Query Frame = 0
Query: 266 CKE-EEEQQTTIEFVVYKLTHVCEDGTQRLIEVESLDGDAMFLGDSQSTCVSTKDFPQCL 325
CK E + TI F VYK ++ + +EV+SL A+ + VS +F CL
Sbjct: 323 CKPFERDPPKTIGFKVYK----NDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCL 382
Query: 326 PNRIYFTDSFQFLTRTPFLNGPQDAGIFNLEDGSI 360
PN IYFTD + ++ +F L+DGSI
Sbjct: 383 PNSIYFTDKKE-----------EEVKVFKLDDGSI 402
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6577578.1 | 9.0e-140 | 64.92 | putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022923266.1 | 9.0e-140 | 64.92 | probable F-box protein At1g65740 [Cucurbita moschata] | [more] |
XP_023552957.1 | 1.2e-139 | 64.92 | probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo] | [more] |
XP_023552958.1 | 1.2e-136 | 62.70 | probable F-box protein At4g22165 [Cucurbita pepo subsp. pepo] | [more] |
XP_022923267.1 | 1.4e-135 | 61.64 | probable F-box protein At1g65740 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q3EBY8 | 7.5e-04 | 33.68 | F-box protein At2g17690 OS=Arabidopsis thaliana OX=3702 GN=SDC PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E6C7 | 4.4e-140 | 64.92 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... | [more] |
A0A6J1E5P5 | 6.5e-136 | 61.64 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... | [more] |
A0A6J1E923 | 1.1e-135 | 62.17 | probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... | [more] |
A0A6J1E6A0 | 8.0e-126 | 63.06 | uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC1114311... | [more] |
A0A1S3BM31 | 1.4e-125 | 59.65 | uncharacterized protein LOC103491129 OS=Cucumis melo OX=3656 GN=LOC103491129 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT2G17690.1 | 5.3e-05 | 33.68 | F-box family protein with a domain of unknown function (DUF295) | [more] |