Spg015898 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015898
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold6: 43164589 .. 43167610 (-)
RNA-Seq Expression	Spg015898
Synteny	Spg015898

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAATTTTGGACCACTCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTGGGAAACCGACCCAGAGGAGGAACCAACCAAAGGGCCAGGCCAACTTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGAGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCACCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAAACCCTAGGAGCACGAGCAGGTATTTATACCCCTCTTCGCCACTAAAGAAGGGGACCCGAACTCAATTCTCGACTCTCATCCCTTGCTCTCTAGCTCTCCCTTCCGATTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCATCACACCGGTGTGCAGGTTTTCTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTCCTCTGACCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGTTACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAGTTGACCCGCCCTTCACAGAGGAAGTCATGAAAGCCGAGGTGCCACAGAAGTTCAAGGTACCTACATTCACACCGTACGATGGCAAGAAAGACCCTGTGCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGACGTCTCGGATGCAATCAGGTGCCGTGCCTTCTTTTTCACTTTGACAGGATCAGCCAAGCATTGGTTTGAAAGGCTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAACGCAAGCCCCACATCAACCTCCTAACAGTCAAGCAGCAGCCAGGAGAGAGCTTGCGCGATTACATAACGCGTTTTAACGACGAAGCACTGCAAGTTGAGGGATACAGTGAGGGAGCAGCCCTGGTAGCCATAACAGCCGGACTGGAAGACGAGAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTACGCAGAGTTTGTCTCCCGGGCACAGAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGGTATGTACTCTGTCCATCTATCAAAGGCGTCCCCCCCTTTGGAGTTCACCGAGGCTGAGGCAGCAAGCATTTATCAGCCACATAATGATGCTCTGGTGGTCACTCTAATTGTGGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCAGCCTTCAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCCAGAAGGTAGCATAGAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTGTCAAAGGAGAACAGAAAGAATCAAGAGAGTGTTACTGGACCGCGCTGAAAGCCGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG

mRNA sequence

ATGGGCAATTTTGGACCACTCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTGGGAAACCGACCCAGAGGAGGAACCAACCAAAGGGCCAGGCCAACTTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGAGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCACCCCGGTTTCGCCTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGTTACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGCCGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG

Coding sequence (CDS)

ATGGGCAATTTTGGACCACTCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTGGGAAACCGACCCAGAGGAGGAACCAACCAAAGGGCCAGGCCAACTTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGAGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCACCCCGGTTTCGCCTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGTTACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGCCGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG

Protein sequence

MGNFGPLDAQGADEDVRAKIGLGNRPRGGTNQRARPTWPDPNGRPRPKAEADHSARLSGPSSVTSSRSPMSLATPVSPVGAVCGEESLPNLHIGHSMSKGMEKGNQDINTENSDGDRYQRRSRAESPRPRSPLPSSREKQTDLKFAALENKVSAMDQNLSRILRILDKPGPSTRTLDERLVRDPRKGKEPLERTAESETRSKGKKTSSMTSKVRGLKPTDRTILRSPESSTLKGHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNALKELGNPQGELPKLKDSGAQDLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAVKPQRAEADQRMSRGRAGHTSTDTESELMEF

Homology

[Close]

BLAST of Spg015898 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 5.7e-34
Identity = 96/198 (48.48%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 339 QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGK 398
           Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  K
Sbjct: 345 QRYMSAGEFFYSKR-EPDGKRTD--------PKRERSGDKPQGSRWEKRDRSSQKDPPRK 404

Query: 399 FEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLK 458
           FEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K +YCLFHRDHGH+T++C  LK
Sbjct: 405 FEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLK 464

Query: 459 DEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSR 518
           +E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S R
Sbjct: 465 EEVEGLIRRGYLKEYVEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGR 522

Query: 519 KRKAIAREARFEPEYRAV 537
           KRKA  REAR   E   V
Sbjct: 525 KRKADVREARTSREQNEV 522

[Close]

BLAST of Spg015898 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 4.5e-31
Identity = 92/198 (46.46%), Postives = 120/198 (60.61%), Query Frame = 0


Query: 339 QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGK 398
           Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  K
Sbjct: 129 QRYMSAGEFFYSKR-EPDGKRTD--------QKRERSGDKPQGSRWEKRDRSSQKDPPRK 188

Query: 399 FEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLK 458
           FEKYTPT VP EQVLMEI++  LLK+P RMK    +R K +YCLFHRDH H+T++   LK
Sbjct: 189 FEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLK 248

Query: 459 DEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSR 518
           +E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+R
Sbjct: 249 EEVEGLIRRGYLQEYVEEPKA-----------TQNGESEKSPAREIRTIMGGPIERESAR 306

Query: 519 KRKAIAREARFEPEYRAV 537
           KRKA  REAR   E   V
Sbjct: 309 KRKADVREARPSREQNEV 306

[Close]

BLAST of Spg015898 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 4.5e-31
Identity = 93/198 (46.97%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 339 QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGK 398
           Q+YMSA E   SK+ E   KR+          K++R+ +  +G     R R  +  P  K
Sbjct: 170 QRYMSAGEFFYSKR-ESNGKRTD--------QKRERSGDKPQGSRWEKRDRSCQKDPPQK 229

Query: 399 FEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLK 458
           FEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K +YCLFH DHGH+T++C  LK
Sbjct: 230 FEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLK 289

Query: 459 DEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSR 518
           +E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S R
Sbjct: 290 EEVEGLILRGYLKEYVEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGR 347

Query: 519 KRKAIAREARFEPEYRAV 537
           KRK   REAR   E   V
Sbjct: 350 KRKPDVREARASREQNEV 347

[Close]

BLAST of Spg015898 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 5.0e-30
Identity = 91/199 (45.73%), Postives = 119/199 (59.80%), Query Frame = 0


Query: 339 QKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDR 398
           QKYMSAEE       L+ K+++++ +RS      S+ +K+ R      G+ D  R     
Sbjct: 29  QKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV----VGQKDLPR----- 88

Query: 399 AHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTR 458
                KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P++R K +YCLFHRDHGH+T 
Sbjct: 89  -----KFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATL 148

Query: 459 NCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPA 518
           +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG  
Sbjct: 149 DCFDLKEEVEGLIRKGYLKEYVDDLKATPNR----------ENDNKSPTREIRTIMGGST 203

Query: 519 GGSSSRKRKAIAREARFEP 532
              S RKRKA  REAR  P
Sbjct: 209 EQESDRKRKASVREARDGP 203

[Close]

BLAST of Spg015898 vs. NCBI nr
Match: XP_022152370.1 (uncharacterized protein LOC111020115 [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 6.3e-25
Identity = 80/203 (39.41%), Postives = 117/203 (57.64%), Query Frame = 0


Query: 332 DLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPD 391
           D +ELI  K    E+ +   ++ ++ +++ +   D         D+  R    H R RP 
Sbjct: 37  DGQELIRIKTGRPEKKIDKGRAGKDKEKTDSKSKDKGPSSSSSRDDYRRSDSTHNRSRP- 96

Query: 392 RAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHG 451
                  +E+YTPT +P  ++L  I  +    LLK P +++  P++R+K +YCLFHRDHG
Sbjct: 97  -------YERYTPTTIPISEILTNIEESEMEKLLKRPEKLRGDPEKRNKDKYCLFHRDHG 156

Query: 452 HSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTI 511
           HST NC +LK +IE LIQ+ Y K+FVG+P++  A++   R R     R K+ P   I TI
Sbjct: 157 HSTSNCWELKRQIEDLIQDDYFKKFVGKPRSNSAEKKDERKRSRLPPRRKDRP-AVINTI 216

Query: 512 FGGPAGGSSSRKRKAIAREARFE 531
           FGGP+GG S  KRK +AREAR E
Sbjct: 217 FGGPSGGQSGNKRKELAREARRE 230

[Close]

BLAST of Spg015898 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-34
Identity = 96/198 (48.48%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 339 QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGK 398
           Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  K
Sbjct: 345 QRYMSAGEFFYSKR-EPDGKRTD--------PKRERSGDKPQGSRWEKRDRSSQKDPPRK 404

Query: 399 FEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLK 458
           FEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K +YCLFHRDHGH+T++C  LK
Sbjct: 405 FEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLK 464

Query: 459 DEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSR 518
           +E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S R
Sbjct: 465 EEVEGLIRRGYLKEYVEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGR 522

Query: 519 KRKAIAREARFEPEYRAV 537
           KRKA  REAR   E   V
Sbjct: 525 KRKADVREARTSREQNEV 522

[Close]

BLAST of Spg015898 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-31
Identity = 92/198 (46.46%), Postives = 120/198 (60.61%), Query Frame = 0


Query: 339 QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGK 398
           Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  K
Sbjct: 129 QRYMSAGEFFYSKR-EPDGKRTD--------QKRERSGDKPQGSRWEKRDRSSQKDPPRK 188

Query: 399 FEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLK 458
           FEKYTPT VP EQVLMEI++  LLK+P RMK    +R K +YCLFHRDH H+T++   LK
Sbjct: 189 FEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLK 248

Query: 459 DEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSR 518
           +E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+R
Sbjct: 249 EEVEGLIRRGYLQEYVEEPKA-----------TQNGESEKSPAREIRTIMGGPIERESAR 306

Query: 519 KRKAIAREARFEPEYRAV 537
           KRKA  REAR   E   V
Sbjct: 309 KRKADVREARPSREQNEV 306

[Close]

BLAST of Spg015898 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-31
Identity = 93/198 (46.97%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 339 QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGK 398
           Q+YMSA E   SK+ E   KR+          K++R+ +  +G     R R  +  P  K
Sbjct: 170 QRYMSAGEFFYSKR-ESNGKRTD--------QKRERSGDKPQGSRWEKRDRSCQKDPPQK 229

Query: 399 FEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLK 458
           FEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K +YCLFH DHGH+T++C  LK
Sbjct: 230 FEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLK 289

Query: 459 DEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSR 518
           +E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S R
Sbjct: 290 EEVEGLILRGYLKEYVEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGR 347

Query: 519 KRKAIAREARFEPEYRAV 537
           KRK   REAR   E   V
Sbjct: 350 KRKPDVREARASREQNEV 347

[Close]

BLAST of Spg015898 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-30
Identity = 91/199 (45.73%), Postives = 119/199 (59.80%), Query Frame = 0


Query: 339 QKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDR 398
           QKYMSAEE       L+ K+++++ +RS      S+ +K+ R      G+ D  R     
Sbjct: 29  QKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV----VGQKDLPR----- 88

Query: 399 AHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTR 458
                KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P++R K +YCLFHRDHGH+T 
Sbjct: 89  -----KFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATL 148

Query: 459 NCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPA 518
           +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG  
Sbjct: 149 DCFDLKEEVEGLIRKGYLKEYVDDLKATPNR----------ENDNKSPTREIRTIMGGST 203

Query: 519 GGSSSRKRKAIAREARFEP 532
              S RKRKA  REAR  P
Sbjct: 209 EQESDRKRKASVREARDGP 203

[Close]

BLAST of Spg015898 vs. ExPASy TrEMBL
Match: A0A6J1DDR5 (uncharacterized protein LOC111020115 OS=Momordica charantia OX=3673 GN=LOC111020115 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-25
Identity = 80/203 (39.41%), Postives = 117/203 (57.64%), Query Frame = 0


Query: 332 DLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPD 391
           D +ELI  K    E+ +   ++ ++ +++ +   D         D+  R    H R RP 
Sbjct: 37  DGQELIRIKTGRPEKKIDKGRAGKDKEKTDSKSKDKGPSSSSSRDDYRRSDSTHNRSRP- 96

Query: 392 RAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHG 451
                  +E+YTPT +P  ++L  I  +    LLK P +++  P++R+K +YCLFHRDHG
Sbjct: 97  -------YERYTPTTIPISEILTNIEESEMEKLLKRPEKLRGDPEKRNKDKYCLFHRDHG 156

Query: 452 HSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTI 511
           HST NC +LK +IE LIQ+ Y K+FVG+P++  A++   R R     R K+ P   I TI
Sbjct: 157 HSTSNCWELKRQIEDLIQDDYFKKFVGKPRSNSAEKKDERKRSRLPPRRKDRP-AVINTI 216

Query: 512 FGGPAGGSSSRKRKAIAREARFE 531
           FGGP+GG S  KRK +AREAR E
Sbjct: 217 FGGPSGGQSGNKRKELAREARRE 230

The following BLAST results are available for this feature:

BLAST of Spg015898 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	5.7e-34	48.48	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	4.5e-31	46.46	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_022142767.1	4.5e-31	46.97	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022159192.1	5.0e-30	45.73	uncharacterized protein LOC111025612 [Momordica charantia]	[more]
XP_022152370.1	6.3e-25	39.41	uncharacterized protein LOC111020115 [Momordica charantia]	[more]

BLAST of Spg015898 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	2.8e-34	48.48	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	2.2e-31	46.46	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	2.2e-31	46.97	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DZ52	2.4e-30	45.73	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDR5	3.0e-25	39.41	uncharacterized protein LOC111020115 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Spg015898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 248..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 519..566
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..566
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015898.1	Spg015898.1	mRNA