Spg015889 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015889
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	BEST Arabidopsis thaliana protein match is: embryo defective 1303 .
Location	scaffold6: 39762699 .. 39771104 (-)
RNA-Seq Expression	Spg015889
Synteny	Spg015889

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTTGACGATTCCATTAGGGTTCTTGAGTTTTCAAAGTCTCTAAGTGTTAAAGAAGTGAAAGATTGTTTTATTGCAGCCTATCCACTTTCTTATACACAAAGAAAAGTGCCACTTCATTTTGTTCTTCCAATCCTCGAGTCTGATACTGTGAACCCAAATATAGTTGAAAATATCTCAAGTCTGTTGGTTTTCTCCGTCAAGCAAGCAACCACTTCAAATTTTTCATCAACTGATCCTTCTTGTCCTCTCTCCTCTCCAACAACATCTGAGAGTTGTCTAACCAAAGGCATCATTCTTTTGGAAAAAGACCCCACATCTTCTCGAACTCCTTGTGTTGATGATACTAATGTTGAATCTGAAGTCAGTCTAAGTAGCTTGGATTCCATCCTTTCGCCCATGGAAAATAAAGTTGATGATATTGAGATTGAAGATTCATTACTAGAAGACCTAGGTTCTTTATTTAAAAAATGTGACAAGGAGACTCTTCATCCTCCATCCTTAGTGCCTAGCAAATTTGCTTCTTTTATTGAAGTTTGTGGTCTTGAGTTACATGCGTTTGCTAGGACTATCTATAAATATTGTGGAGCTACATATGCATATGACTCTAAGAGAAACGAGACAACAAATATGAAAAGACACTTAGAGAAATGTAAGGAGTATATAAGTGAGAGGATTATGTTGAAGGAGAGAGGGATTCTGAATGTAACTTGATAGCCACATCGTTCACTCAAGAGAATTGTAGAACGATGCTTGCCTATATGGTCATATTGGATGATTGGCATTTAAGATTGTAGAAAGTGAAGGATTTTCATGAGTCACTCTTGCAAAAGATTGTTTTCAATTGTACATGAGAGAGAAAAAGAGGTTGAAGAGTGCCATAACTAGAAGTGGCCAAAGTTTGTTTAACAACTAATACATGGACTTCTCAATGAGAGTTGGATCTTTATAAAAAAAAGAAAACAAAGATATTTGATATTTGAAACTTATTTTTACTATACTTTTGGGAGCTTCATTTAGTGTAAACTTTGATTTTTGAAACTTTGTTAGCTCTTTTCTTATAGCTTTTTTTTTTTTTTTTTTTTGAAAAATTGGAGCTTATTGTTGTGTGTGTATATATATACAGGTATTATTTGAAATTTGTTGATGTAGTTTAAAATGTTAGTTTTGTTGAACATTTATTAGATTTATTTAAAAAAAAAAACATTTATTAGATATGGTATCGATTATCAAGAAATTGATGAAGTATCAAAAGGGGGTTTAATATAGAATTGATAACGTTCTGACAATGGTTTTAATTTGAAGTATCAAAGGGGTTCAGTATGGCATTGATAGAGTGGCATTACTTAAAAAAAGGGATTAGCTCGAACCGACCTGGTTCGGGTCGGTTGTTCGTACAATTGACCCTGAACCAACTTTTTTACACCCCTAATCAATATCATCAACAAGCCATAATAGTTTGAATTACCCCTATCCTAGCCTTTTATGAATGGAAAAGAATCCAAAAAAATACCGTGATGTTTTCTTATCACACACCCTCCCTGTTGATACTCCTTGACCCCCTTTGTCGTCGTTGATTTCTCTCTTCCCACCGTTCTAGCCTCCCATGGAGTCTTCTTTAGAATCCATTCTAATATCATCCTCTCAATTCCCTGTTCGTTCTTGCTAGTTGCCGCTGTTGCGCCACCATTGTTGGTGTTGTTGGTTGCCGCCACACTTCGCCTCTAGTCGTCTCTCAGTATTTCTAGCTGTAAGGTAAGTAACCTTCACTCTCTTCCTCAATTGTTGCCTTTGCTTTTCAAAATTGAAAAGCCAAAGCGATGGATCAATTGGTTAATTCATTTCAGTCTGGTTTGGACAGAAGCTTGTTTCTTATGCACATATTTGATGAAGTTTTTCAGCTATAGAATGTAGGTCTACGAGGCTTATTGCAGCGATGAGATTGATCGGTGTCTAATACAAAGTGTTTTGTTTTGGATAAGAAATAGGGTACCTCTATTAAATTAAAACCCTTTATTAAATTAAAACCCTATCAAACAACCTAAACGCCATAAGGAGAGAAGGCGTCTCCAAGTGTCTAATACATAGTTATAATATACATAAATTGCTAAGTTATTTGTGAATCCAATCATAGCGTGCACTCAAGGACTATTGCACACTTGCATTCATTTGCAAAATATGGACTACTTCAGAATCACATTTCATTTGAAGCTCATAACTCAACAAGGTGACTTTCTTTCTCTTTTGCTGTAACATGTTTTTGAGACCATAACTATTTCAGTTTACAGTAGGAGCAAGTACTGCTTATATGTGGTCTTAATGAGATCAGTAGAAGGAGGCTATTTGGCCTTTGGAGGTCCTTGTGGATTGGAATTTTAAAGGCAAGGCTAAGGTTTTTAGGAATTGTGCGGGTAGAGCCCTTTTGATAGGAGATAGAAGAAGACTTTTGAAGATAGAATCTCTATGTTTGAGTTTTTGTAATAGTGGTACGACATACCACTTTATGGTGATGTTCCCATGAGTGAAAATTCTTTTGTAATTATAGTTTTGTTATTGTTATTAATGTTTGTCAGGCTCTTATTTTGTAGTCCTTTTCGGGTGGGTCCAGTGTTTTAAAAGGCTCAAGGCGCACTAAGGCGCAATGGCCTCCTGGGGCCTAGGCGCAAGGCGCACAAAAAGGCGCGGGCTTTTTTCTCTAAGGCGCACTATATAGAAAAAAAACTTACAAAAATATATACATGTATATAAAACACTTTCATGACAAGTAATGAAGTTTTTAACCAAGAAAAATAGATAAAAGATAAATAAGGTTCAAATATTAGTCTTCCAACATAGAGTCAAATGTCAATACTCCACTAAAAACAGTGAGTTTAGTATTGTTAATATGCCTTCTGACTCTCCGAATGACAAAGTATGATGATGTCAATACTCCACAAAAAATATATGCCTTGAATATGATATTTGACACTCCGAACGACCAAGTACGGGGGTCTCGCTGCCCGGTCAGCGAGTTGGGGTCCAGGGGCGAAGCGCCCGGTTTTGGGGGTTCGGGGGCAACGCCCCAGAAGCTAAATTTAAAATTAGCTTCATAACAAGTATTTTGGTTTCGAGGCGCCTAAGGCGCACGCCTCGGGGGCTTCGAGGAAGGCGCGCGTTGCGACTTGTGCCTAGGCGGCGCGCGCCTTTTAAAACACTGGGTGGGTCTTCTTCTACCCCTGTCCTTCTACCCTTTCACTAGAAGTAGGAGAGGTTTATGTGGTGTGCTGGGAATTTGTAGTTTTGTGGGGCCTTTGGGGTGGGAGGAATAATAGAACCTTTAAAGGACTTGAGAGGACTTCGAGTGATGTACGGTCCATTTCATTCAAAGGGGAGGTTTCTGTGGTGAGCTGGGCAATGTGTAGTTTTATGGGGCCTTTGGGGTGGGAGGAACAATAGAACCTTTAAAGGGCCTGAGAGGACTTCGAGTAATTTTTGGTCCTTTGTAAGGTTCTATGTTTTTCTCTATGCTTCATTTTGGCCGAGTCTTTTTGTAATTATCTTTTAGGTCTTATTTTGATTGGAGCCCTTTTTCTAGTTTGGCCTCTTTGCCGTGGGTTGTGTTTTTGTACGTCCTTGTATTCTCTCTCTCTTTTTTTTTTTTCTTTAAGAGAAGTTCGGTTAACCCTAGAAAAAAAATCTTGGAGAATGCAAAAAGTGACTACAATGAGTTATATTAGAAACAAGCATCAATGCCATCAACAAGCCAGAATAAAACACCTTAAATACTTTCTTTCCTTGTTTCTTACCTTTTATTTATTTATTTATTTTATTTTTTTTAATATTTGTGAGTGTCTGAACAACCATTTTGCCTTTTCCTCCTGTACAATCTAAATAAAAGGGATAGGCCAAACACACCTGGATATTTGCCGAAATAAACAATAATGATAATCTAATTAGCTTTACCTGCTGTTCATATATAGCTTCTCAAACTCCCTACTTCCGCAGGTAAGGAAACCCCTTACAGTATTGATATTCAGGGAGAGAAACAGCTCTAAGGCAATACAAAACTTCCAGCAAGTTTAAGAGTGCTGGTTACTCTCCTCGCTCTTACCACACTCAGCAGAAAATCAACATAAAAACTCTAATAGATAAAAGACATCATATGTATGCTACCCAGCTCCCAACATGGACTCTCCAGACCCTCTCTTGGGACCACAGTGGTCCCCAATTGCTTTCAGCGCCCTCAGCACAATCTCCCATATAACTAACTCTCTTCTGCATTCTCCATTCTACACCTCCTATAAACTTTCGTTATTGGTGGCCTAACATCAGCCAAATCGGGGCCTCATTGTATTCAATTAGCTCCCTTTATTTATTTTTATTTTTTTAAAGTATTCAGTTGGGTCACTTTGTTTTAGGGTCCATCCTTATCAAAGCCACCCTCTATAGGGTTTCTCGGTGGCTTTTGAAAAAAAAAATATCCTGTTTGGAAAAGAGTATCTAGAAGATCTTCCAGCTTGACGTCAACAATTTCAGTTTGAATTCTAGCATGCCTTTCAACACCAGCTCTAGAGTTTACAGATTTGATTCGTATCTTGTATTTTTCATTGAAGCAATGGAAGTCTATAGAAACAGATAATTCTTATCCACTTTTCTCATATAGCTTCTTCTTCTTCTTCCTTTTTTCTGTGTGATTTTTAAACTTCCTTAACTGTGCAACACGTATGGTTTGATAATCAATTTTTTATGCTGTTTTATCATTTCATTCCTCTTTTCATGTTCTTAAATCTTAATTACGTTGTATACAGTCTGGGTTGCAACGTGTAATTAGGAAATTCATTTTTTTTCTCATTTTATTGGTGCTTTGATCTCAGAAATTATTGTTTACAGTGTCAGGTTGTCATCCACCCTCGCCTGGAGATGCTTACTACAAATTCTGGTGCCCTGCTACCTCTTCTACCCCCAGGTACAAGCAACTACTTTCCAAATCGTTTTATTGATTTGATGTAAGGGGAAATGAGTAGATTTAATTATAATAGAAAAGAATCAGTACAAGAGAAGGAAAGAAGGATAAGGCATTTCCCTTACCTCAGAAAGGAACTTGTAAGAAGCAACCATATCTAATTTGATTCGAGAAGTAACGTAATGCCAGAATTCCTACTATAGTCACTCCAACCTGAGGTGCTGTACTGTATACAATCCAAAAAATTGTCAAAGTTTTAGAGATATCTTGGAGGAATCTATTTTCTTTTCAATCTAATATTAGCCATGTAATTGCTTTGTAAGGATTTCCATATAGAACTCTAACTTTATCTTTCAGCTACCAGCCCACAAAAACTTCTGAACCTGGGATCTCATATCCTTCAGGAAGCTTAAGAATCCCTAATCCAACATGATGACAATTCCAGCTTTTAGTGGTAACTTGGTATAGAAAGAGATGGTTTATATTGAGGAAAGTTGACTTCTGTTTAGATCCCTTCCTAATCAGGTTAGTTATGTTGGTAACTGAGGTTGGGGTTTTTGGTAGTTAGGTAGACTAGAGCAGACTTGCAAGAGTATGCCCCTGAATTATCAAAATTCCAATTGCAAAGAGATGTTACATTCTTTCATACTAATATCTATCATGGGTTATTAAGTTTGGGATAAAATAATTTAGCTGGTATAGATCCACTCAAGCAGTCTGATTGGTTGAGATAACGTTTCTGTGCTCTGTGTTTATATGAAAGGTCTTTTTCCTTCTTGGAAGTAATACATTAACTATTGTAGAAGTAATTGTTTCTGGTGTAATGGTGTTTGAAGCTGGCTTGTCTTACATGGACACACATATGTGGTACAACCCAGTCATAGCTTTCAATGGTTTTGAGGTCTCAATATTTAATTAGTCGGCTGAGCAAGGTGGAATATTGATGGACCATAACATCTTCATCATTCTTTGAAATGTATATTTATTTACACTCGGTTGAATGGAGCATTCAATTTTCACTAATGACTGCTAATTTTGATAAATTAAGATTTGTCAAAGGTCTCTATCTCCGTAACATGATATATGAACTTTTCTTGTGGCCTTGTGTTATCCTCCATGCTTTTAAGTTTCAATATATTTCTGCTCGGGCTAAAAAATGGAACTAATTAGCTTATGTAATCTTTTTTAATTTGAAGACCATTATATTTACTTTGGTACTTTATTCAGTTAAAAATTAGTGGTTTCTTGTTTAAATTATTGTTCTATTACCATTAATTTGACAAATTTTTTGATATTTAGTTGTAATCTTGTCTTGGTAAAATAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGATTTCCATCTTAGAAGGGATACTTTCCAACTTCAAACTCCTAATGAGAGGAGACAACCAGTGATTGCTAAAGCAGAACCACTTTTTCTCAAACCAATTCCATCTACTGGGACGAGAGGAGGCGTTCTATATTCTAGTAGAAAGAACAATGCTTTCATGTGTTTTGCTGCTTTGGTAAATTGGTTCTTTTTCTATTTGTTTATTTCTTTTAATGGTTGCTTATTTTCTTTTGGCATTGAGTTCAACTGTTTTTTTTTTTACTTGAAAGTTCCCCTCTTATTTTTGGTAGTTGGTAATAATTTTTTTTTATTAGAAACATTACGTTAGAATTTAATGTATAAATTTAAGCTTAGATGCCAAGGGAGATTATCAGAAGGCTTCACAATTTGTTAAAATGAGTTGGTGGGACATTTGGCTTGTGAGGAATCATAGAATTCTTAGAGAGGGGTGAGAGGTATGTAGAGGAGTTGTGGGAGGTTATTAGGTTTAATTCCTCGGCTTGGGCCTTGATGCCTAAGGGTTTTTTTTTTTATTTTTTTTTTTTTGTAATTATCAGTTGGGTCTTATTCTTTTGGATTAAAGCCCCTTTTTATACTTTGAGCGTTTTTTTTTGTTTGACTTGTATAATCTTTCATTTTTTTTGTTTCAAAAAAAGTTTGGTCGCTTGTCAAAAAAAAAGGGAAAAAGAAAAAAGGAAGTTGAAATGAGCAATAGTTGAAGCCACATTTTTCTCTTTTACCTAATCAGTTAGTACCTATTTCAACCGTGTTTGAAGGCATATATTAAGGCTGTAGTAGACTGGGTGGTGGATTTTCAAATGGATTTGAGTTTTTGTTAAATAATCAATTCTAAAGAATAAAATAGGTTTTTAGGCATAGTTAAAAACAGGATATTTGAAAGAGAGATTAAAATAAATTAAAAAAAAAAATTAATGGTGCCATTTCTCTGCAGAATGCTAGATGTGCAGCGGAGCAGACCCAGACTGTTACGAGAGAGGCTCCTACAATCACTGTTCTTCCTGGTAACAATCACTCGCAGATTTTATGAATAATAGTAACTTTTAACATCAATCTTCCTAGTAGTAAGTTGCATATGCACATGTTATCGCTGCTCAACTAGAACACCATAATCTGTTACTCTTTTAAAATAACTTGCATCACTATGTTCTTACCGATTTGTCTCCCTAGCATACACACAAGGCGTTGTCCTAGGCTATCATAATTTTGGCTGTTGTTAAGCCTTATTTTTATAATTTTAACCAATACACTGTTATTACCTAAAACTAAAATTGTAGGCAAGGAAAAGTCACCGCAACTGGATGATGGTGATTCTGGATTCCCACCTCGTGATGATGGTGATGGTGGCGGTGGCGGCGGAGGCGGCGGAGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCCTTCCTTGGGTTCTTAAAAGATAAAGAAAGTGAAGGGCCTTATCAGAATGATCGGAGAAGATAAATATACTTTGATCAAATATATAATGTAGATTCTATATTCATACTTCGATACAATCTCAAAATAAATGTTTGTTTCAAGTCAAGTTAATTTCATTAAATTCATTTCATCCAGTAGTTTGCTTTTAATTCCGTAATCCGTATGGACTGACTGACTGGAGTAAGAGCATAAAGTTTTGAAGAAATCTCATTTGGATTTTCCGTACTCAGAGATATAAATGGTGGAGAGGAAATCTAATGAGTTCCATGTTGATAGAATGGTTGCTGATTTGAGGGTATTTGGAGTTTTGTGATTTTTAAGAGTTCTTTAAGCAGAGGCTGAGGGTTTATGTTTAAATTTTAGTTCTGAGGATCCCCAGTTGTGAAGCCTATGCCATTTCCTTTTGTTTTATTTAGTTTACATATTCTTGAGTTGGGTTAATTTAATTGGGTTTCTATCACTAGGTCCATTGCTGATACTTGTGGTAAATCATTCAGTTGAACGATTGATGTTTTTAGGCTAAATGGATAGCTGGAACAATTTAATAAAATGTTACAAGATTATTGACTAATTAACAATGTTAATATTGTACATTAGTGATTATTAGTCAAATAATCTGTAAATCTTCTTTGATTGCG

mRNA sequence

ATGCCATTTGACGATTCCATTAGGGTTCTTGAGTTTTCAAAGTCTCTAAGTGTTAAAGAAGTGAAAGATTGTTTTATTGCAGCCTATCCACTTTCTTATACACAAAGAAAAGTGCCACTTCATTTTGTTCTTCCAATCCTCGAGTCTGATACTGTGAACCCAAATATAGTTGAAAATATCTCAAGTCTGTTGGTTTTCTCCGTCAAGCAAGCAACCACTTCAAATTTTTCATCAACTGATCCTTCTTGTCCTCTCTCCTCTCCAACAACATCTGAGAGTTGTCTAACCAAAGGCATCATTCTTTTGGAAAAAGACCCCACATCTTCTCGAACTCCTTGTGTTGATGATACTAATGTTGAATCTGAAGTCAGTCTAAGTAGCTTGGATTCCATCCTTTCGCCCATGGAAAATAAAGTTGATGATATTGAGATTGAAGATTCATTACTAGAAGACCTAGGTTCTTTATTTAAAAAATGTGACAAGGAGACTCTTCATCCTCCATCCTTAGTGCCTAGCAAATTTGCTTCTTTTATTGAAGTTTGTGGTCTTGAGTTACATGCGTTTGCTAGGACTATCTATAAATATTGTGGAGCTACATATGCATATGACTCTAAGAGAAACGAGACAACAAATATGAAAAGACACTTAGAGAAATGTAAGGAGTATATAAGTGAGAGGATTATGTTGAAGGAGAGAGGGATTCTGAATTTGCCGCTGTTGCGCCACCATTGTTGGTGTTGTTGGTTGCCGCCACACTTCGCCTCTAGTCGTCTCTCAGTATTTCTAGCTGTAAGCGTGCACTCAAGGACTATTGCACACTTGCATTCATTTGCAAAATATGGACTACTTCAGAATCACATTTCATTTGAAGCTCATAACTCAACAAGAAGGAGGCTATTTGGCCTTTGGAGGTCCTTGTGGATTGGAATTTTAAAGGCAAGGCTAAGGTTTTTAGGAATTGTGCGGTGTCAGGTTGTCATCCACCCTCGCCTGGAGATGCTTACTACAAATTCTGGTGCCCTGCTACCTCTTCTACCCCCAGGTAGACTAGAGCAGACTTGCAAGATGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGATTTCCATCTTAGAAGGGATACTTTCCAACTTCAAACTCCTAATGAGAGGAGACAACCAGTGATTGCTAAAGCAGAACCACTTTTTCTCAAACCAATTCCATCTACTGGGACGAGAGGAGGCGTTCTATATTCTAGTAGAAAGAACAATGCTTTCATGTGTTTTGCTGCTTTGAATGCTAGATGTGCAGCGGAGCAGACCCAGACTGTTACGAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAAAAGTCACCGCAACTGGATGATGGTGATTCTGGATTCCCACCTCGTGATGATGGTGATGGTGGCGGTGGCGGCGGAGGCGGCGGAGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCCTTCCTTGGGTTCTTAAAAGATAAAGAAAGTGAAGGGCCTTATCAGAATGATCGGAGAAGATAA

Coding sequence (CDS)

ATGCCATTTGACGATTCCATTAGGGTTCTTGAGTTTTCAAAGTCTCTAAGTGTTAAAGAAGTGAAAGATTGTTTTATTGCAGCCTATCCACTTTCTTATACACAAAGAAAAGTGCCACTTCATTTTGTTCTTCCAATCCTCGAGTCTGATACTGTGAACCCAAATATAGTTGAAAATATCTCAAGTCTGTTGGTTTTCTCCGTCAAGCAAGCAACCACTTCAAATTTTTCATCAACTGATCCTTCTTGTCCTCTCTCCTCTCCAACAACATCTGAGAGTTGTCTAACCAAAGGCATCATTCTTTTGGAAAAAGACCCCACATCTTCTCGAACTCCTTGTGTTGATGATACTAATGTTGAATCTGAAGTCAGTCTAAGTAGCTTGGATTCCATCCTTTCGCCCATGGAAAATAAAGTTGATGATATTGAGATTGAAGATTCATTACTAGAAGACCTAGGTTCTTTATTTAAAAAATGTGACAAGGAGACTCTTCATCCTCCATCCTTAGTGCCTAGCAAATTTGCTTCTTTTATTGAAGTTTGTGGTCTTGAGTTACATGCGTTTGCTAGGACTATCTATAAATATTGTGGAGCTACATATGCATATGACTCTAAGAGAAACGAGACAACAAATATGAAAAGACACTTAGAGAAATGTAAGGAGTATATAAGTGAGAGGATTATGTTGAAGGAGAGAGGGATTCTGAATTTGCCGCTGTTGCGCCACCATTGTTGGTGTTGTTGGTTGCCGCCACACTTCGCCTCTAGTCGTCTCTCAGTATTTCTAGCTGTAAGCGTGCACTCAAGGACTATTGCACACTTGCATTCATTTGCAAAATATGGACTACTTCAGAATCACATTTCATTTGAAGCTCATAACTCAACAAGAAGGAGGCTATTTGGCCTTTGGAGGTCCTTGTGGATTGGAATTTTAAAGGCAAGGCTAAGGTTTTTAGGAATTGTGCGGTGTCAGGTTGTCATCCACCCTCGCCTGGAGATGCTTACTACAAATTCTGGTGCCCTGCTACCTCTTCTACCCCCAGGTAGACTAGAGCAGACTTGCAAGATGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGATTTCCATCTTAGAAGGGATACTTTCCAACTTCAAACTCCTAATGAGAGGAGACAACCAGTGATTGCTAAAGCAGAACCACTTTTTCTCAAACCAATTCCATCTACTGGGACGAGAGGAGGCGTTCTATATTCTAGTAGAAAGAACAATGCTTTCATGTGTTTTGCTGCTTTGAATGCTAGATGTGCAGCGGAGCAGACCCAGACTGTTACGAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAAAAGTCACCGCAACTGGATGATGGTGATTCTGGATTCCCACCTCGTGATGATGGTGATGGTGGCGGTGGCGGCGGAGGCGGCGGAGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCCTTCCTTGGGTTCTTAAAAGATAAAGAAAGTGAAGGGCCTTATCAGAATGATCGGAGAAGATAA

Protein sequence

MPFDDSIRVLEFSKSLSVKEVKDCFIAAYPLSYTQRKVPLHFVLPILESDTVNPNIVENISSLLVFSVKQATTSNFSSTDPSCPLSSPTTSESCLTKGIILLEKDPTSSRTPCVDDTNVESEVSLSSLDSILSPMENKVDDIEIEDSLLEDLGSLFKKCDKETLHPPSLVPSKFASFIEVCGLELHAFARTIYKYCGATYAYDSKRNETTNMKRHLEKCKEYISERIMLKERGILNLPLLRHHCWCCWLPPHFASSRLSVFLAVSVHSRTIAHLHSFAKYGLLQNHISFEAHNSTRRRLFGLWRSLWIGILKARLRFLGIVRCQVVIHPRLEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAKAEPLFLKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR

Homology

[Close]

BLAST of Spg015889 vs. NCBI nr
Match: XP_023540533.1 (uncharacterized protein LOC111800870 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 8.1e-80
Identity = 157/182 (86.26%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTTNSGA+LPLLPP        +GQHWGRM+A +FHL RD+FQ+QT N RRQPVIAK
Sbjct: 1   MEMLTTNSGAMLPLLPP--------VGQHWGRMEAMNFHLSRDSFQVQTSNGRRQPVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKE 450
           A PL++KPI STGTRGGVLYSSRKNNAF+CFAALNARCAAEQTQTVTREAPTITVLPGKE
Sbjct: 61  AGPLYVKPILSTGTRGGVLYSSRKNNAFVCFAALNARCAAEQTQTVTREAPTITVLPGKE 120

Query: 451 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR 510
           KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE PYQNDR
Sbjct: 121 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEEPYQNDR 174

Query: 511 RR 513
           RR
Sbjct: 181 RR 174

[Close]

BLAST of Spg015889 vs. NCBI nr
Match: XP_023005574.1 (uncharacterized protein LOC111498519 isoform X1 [Cucurbita maxima] >XP_023005575.1 uncharacterized protein LOC111498519 isoform X1 [Cucurbita maxima] >XP_023005577.1 uncharacterized protein LOC111498519 isoform X2 [Cucurbita maxima])

HSP 1 Score: 305.4 bits (781), Expect = 8.9e-79
Identity = 156/182 (85.71%), Postives = 166/182 (91.21%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTTNSGA+LPLLPP        +GQHWGRMKA +FHL RD+FQ++T N RRQPVIAK
Sbjct: 1   MEMLTTNSGAMLPLLPP--------VGQHWGRMKAINFHLSRDSFQVKTSNGRRQPVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKE 450
           A PL++KPI STGT GGVLYSSRKNNAF+CFAALNARCAAEQTQTVTREAPTITVLPGKE
Sbjct: 61  AGPLYVKPILSTGTGGGVLYSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKE 120

Query: 451 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR 510
           KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE PYQNDR
Sbjct: 121 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEEPYQNDR 174

Query: 511 RR 513
           RR
Sbjct: 181 RR 174

[Close]

BLAST of Spg015889 vs. NCBI nr
Match: KAG6596785.1 (Protein YELLOW LEAF 1, choloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.4 bits (768), Expect = 2.9e-77
Identity = 154/182 (84.62%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTT SGA+L LLPP        +GQHWGRMKA +FHL RD+FQ++T N RRQPVIAK
Sbjct: 1   MEMLTTTSGAMLSLLPP--------VGQHWGRMKAINFHLSRDSFQVRTSNGRRQPVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKE 450
           A PL++KPI STG RGGVLYSSRKNNAF+CFAALNARCAAEQTQTVTREAPTITVLPGKE
Sbjct: 61  AGPLYVKPILSTGKRGGVLYSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKE 120

Query: 451 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR 510
           KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE PYQNDR
Sbjct: 121 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEEPYQNDR 174

Query: 511 RR 513
           RR
Sbjct: 181 RR 174

[Close]

BLAST of Spg015889 vs. NCBI nr
Match: XP_023553392.1 (uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553393.1 uncharacterized protein LOC111810820 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023553394.1 uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.1 bits (767), Expect = 3.8e-77
Identity = 155/183 (84.70%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTT+SGA+L LLPP        +GQHWG+MKAKDF LRRD+ QLQTPN RRQ VIAK
Sbjct: 1   MEMLTTSSGAMLTLLPP--------VGQHWGKMKAKDFLLRRDSVQLQTPNGRRQSVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRK-NNAFMCFAALNARCAAEQTQTVTREAPTITVLPGK 450
           A P+FLKPIPSTGT+GGVLYS+RK NNAF+CFAALNARCAAEQTQTVTREAPTITVLPGK
Sbjct: 61  AGPVFLKPIPSTGTKGGVLYSTRKNNNAFICFAALNARCAAEQTQTVTREAPTITVLPGK 120

Query: 451 EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQND 510
           EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG Y++D
Sbjct: 121 EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGAYEDD 175

Query: 511 RRR 513
           RRR
Sbjct: 181 RRR 175

[Close]

BLAST of Spg015889 vs. NCBI nr
Match: KAG6577548.1 (Protein YELLOW LEAF 1, choloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 299.3 bits (765), Expect = 6.4e-77
Identity = 154/184 (83.70%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 330 RLEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIA 389
           ++EMLTT+SGA+L LLPP        +GQHWG+MK KDF LRRD+ QLQTPN RRQ VIA
Sbjct: 43  KMEMLTTSSGAMLTLLPP--------VGQHWGKMKGKDFLLRRDSVQLQTPNGRRQSVIA 102

Query: 390 KAEPLFLKPIPSTGTRGGVLYSSRK-NNAFMCFAALNARCAAEQTQTVTREAPTITVLPG 449
           KA P+FLKPIPSTGT+GGVLYS+RK NNAF+CFAALNARCAAEQTQTVTREAPTITVLPG
Sbjct: 103 KAGPVFLKPIPSTGTKGGVLYSTRKNNNAFICFAALNARCAAEQTQTVTREAPTITVLPG 162

Query: 450 KEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQN 509
           KEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG Y++
Sbjct: 163 KEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGAYED 218

Query: 510 DRRR 513
           DRRR
Sbjct: 223 DRRR 218

[Close]

BLAST of Spg015889 vs. ExPASy Swiss-Prot
Match: Q0E3V2 (Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=YL1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.0e-08
Identity = 44/99 (44.44%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 420 CFAALNARCAAEQTQTVTRE------APTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGG 479
           C A++   C A QTQT  R+      +P    +  K +SP+LDDG +GFPP   G GGGG
Sbjct: 58  CEASMRITCCANQTQTARRKSFSGPTSPPSGSVKEKVRSPKLDDGGTGFPPFRFGGGGGG 117

Query: 480 GGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 513
           GGGGG N +GGF  F  +  L +L  +E E   QN  RR
Sbjct: 118 GGGGGSNSAGGFILFVIVLLLDYL--REFERNLQNGTRR 154

[Close]

BLAST of Spg015889 vs. ExPASy Swiss-Prot
Match: F1SZ44 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-07
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 425 NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG- 484
           + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP   G GGGGGGGGGG 
Sbjct: 49  SVRCNATQTQSAQRKSSTATVKRSDPKGKTQGPKLDDGSGGFPPFRFGKGGGGGGGGGGG 108

Query: 485 -NWSGGFFFFGFLAFLGFLKDKE 502
            N+ GGF  F  +  L +LK+ E
Sbjct: 109 SNYFGGFLLFTCVLLLDYLKEFE 131

[Close]

BLAST of Spg015889 vs. ExPASy Swiss-Prot
Match: F1SZ42 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.5e-07
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 425 NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG- 484
           + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP   G GGGGGGGGGG 
Sbjct: 49  SVRCNATQTQSAQRKSSTATVKRSDPKGKIQGPKLDDGSGGFPPFRFGKGGGGGGGGGGG 108

Query: 485 -NWSGGFFFFGFLAFLGFLKDKE 502
            N+ GGF  F  +  L +LK+ E
Sbjct: 109 SNYFGGFLLFTCVLLLDYLKEFE 131

[Close]

BLAST of Spg015889 vs. ExPASy Swiss-Prot
Match: F1SZ41 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RF2 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.5e-07
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 425 NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG- 484
           + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP   G GGGGGGGGGG 
Sbjct: 49  SVRCNATQTQSAQRKSSTATVKRSDPKGKIQGPKLDDGSGGFPPFRFGKGGGGGGGGGGG 108

Query: 485 -NWSGGFFFFGFLAFLGFLKDKE 502
            N+ GGF  F  +  L +LK+ E
Sbjct: 109 SNYFGGFLLFTCVLLLDYLKEFE 131

[Close]

BLAST of Spg015889 vs. ExPASy TrEMBL
Match: A0A6J1KZM4 (uncharacterized protein LOC111498519 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498519 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.3e-79
Identity = 156/182 (85.71%), Postives = 166/182 (91.21%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTTNSGA+LPLLPP        +GQHWGRMKA +FHL RD+FQ++T N RRQPVIAK
Sbjct: 1   MEMLTTNSGAMLPLLPP--------VGQHWGRMKAINFHLSRDSFQVKTSNGRRQPVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKE 450
           A PL++KPI STGT GGVLYSSRKNNAF+CFAALNARCAAEQTQTVTREAPTITVLPGKE
Sbjct: 61  AGPLYVKPILSTGTGGGVLYSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKE 120

Query: 451 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR 510
           KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE PYQNDR
Sbjct: 121 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEEPYQNDR 174

Query: 511 RR 513
           RR
Sbjct: 181 RR 174

[Close]

BLAST of Spg015889 vs. ExPASy TrEMBL
Match: A0A6J1HQC3 (uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.3e-77
Identity = 154/183 (84.15%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTTNSGA+L LLPP        +GQHWG+MK KDF LRRD+ QLQTPN RRQ VIAK
Sbjct: 1   MEMLTTNSGAMLTLLPP--------VGQHWGKMKVKDFLLRRDSVQLQTPNGRRQSVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRK-NNAFMCFAALNARCAAEQTQTVTREAPTITVLPGK 450
           A P+FLKPIPSTGT+GG LYS+RK NNAF+CFAALNARCAAEQTQTVTREAPTITVLPGK
Sbjct: 61  AGPVFLKPIPSTGTKGGFLYSTRKNNNAFICFAALNARCAAEQTQTVTREAPTITVLPGK 120

Query: 451 EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQND 510
           EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG Y++D
Sbjct: 121 EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYEDD 175

Query: 511 RRR 513
           RRR
Sbjct: 181 RRR 175

[Close]

BLAST of Spg015889 vs. ExPASy TrEMBL
Match: A0A6J1F258 (uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC111438781 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.3e-77
Identity = 154/183 (84.15%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTT+SGA+L LLPP        +GQHWG+MK KDF LRRD+ QLQTPN RRQ VIAK
Sbjct: 1   MEMLTTSSGAMLTLLPP--------VGQHWGKMKGKDFLLRRDSVQLQTPNGRRQSVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRK-NNAFMCFAALNARCAAEQTQTVTREAPTITVLPGK 450
           A P+FLKPIPSTGT+GGVLYS+RK NNAF+CFAALNARCAAEQTQTVTREAPTITVLPGK
Sbjct: 61  AGPVFLKPIPSTGTKGGVLYSTRKNNNAFICFAALNARCAAEQTQTVTREAPTITVLPGK 120

Query: 451 EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQND 510
           EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG Y++D
Sbjct: 121 EKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGAYEDD 175

Query: 511 RRR 513
           RRR
Sbjct: 181 RRR 175

[Close]

BLAST of Spg015889 vs. ExPASy TrEMBL
Match: A0A6J1GD79 (uncharacterized protein LOC111453117 OS=Cucurbita moschata OX=3662 GN=LOC111453117 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 9.0e-77
Identity = 153/182 (84.07%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTT SGA+L LLPP        +GQHWGRMKA +FHL  D+FQ++T N RRQPVIAK
Sbjct: 1   MEMLTTTSGAMLSLLPP--------VGQHWGRMKAINFHLSGDSFQVRTSNGRRQPVIAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKE 450
           A PL++KPI STG RGGVLYSSRKNNAF+CFAALNARCAAEQTQTVTREAPTITVLPGKE
Sbjct: 61  AGPLYVKPILSTGKRGGVLYSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKE 120

Query: 451 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR 510
           KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE PYQNDR
Sbjct: 121 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEEPYQNDR 174

Query: 511 RR 513
           RR
Sbjct: 181 RR 174

[Close]

BLAST of Spg015889 vs. ExPASy TrEMBL
Match: A0A6J1CP11 (uncharacterized protein LOC111013392 OS=Momordica charantia OX=3673 GN=LOC111013392 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.5e-76
Identity = 153/182 (84.07%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 331 LEMLTTNSGALLPLLPPGRLEQTCKMGQHWGRMKAKDFHLRRDTFQLQTPNERRQPVIAK 390
           +EMLTTNSGA+LPLLPP        +G+HWGR KAK+FHL RD+FQLQ  N R Q V+AK
Sbjct: 1   MEMLTTNSGAMLPLLPP--------VGRHWGRTKAKNFHLGRDSFQLQPLNGRIQQVVAK 60

Query: 391 AEPLFLKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKE 450
             PLFLKPIPS GTR  VLYSSRK NAF CFAALNARCAAEQTQTVTREAPTITVLPGKE
Sbjct: 61  VGPLFLKPIPSIGTRESVLYSSRKTNAFTCFAALNARCAAEQTQTVTREAPTITVLPGKE 120

Query: 451 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR 510
           KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR
Sbjct: 121 KSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDR 174

Query: 511 RR 513
           RR
Sbjct: 181 RR 174

[Close]

BLAST of Spg015889 vs. TAIR 10
Match: AT1G56200.1 (embryo defective 1303 )

HSP 1 Score: 139.8 bits (351), Expect = 6.1e-33
Identity = 76/119 (63.87%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 396 LKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLP--GKEKSP 455
           + P+ + G   G+   SR+ +  +C +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP
Sbjct: 39  VSPLSAVGLSSGL--GSRRKSLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSP 98

Query: 456 QLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 513
            LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAFLG LKDKE E  Y+  RRR
Sbjct: 99  SLDDGGDGFPPRDDGD-GGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 154

[Close]

BLAST of Spg015889 vs. TAIR 10
Match: AT1G56200.2 (embryo defective 1303 )

HSP 1 Score: 139.8 bits (351), Expect = 6.1e-33
Identity = 76/119 (63.87%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 396 LKPIPSTGTRGGVLYSSRKNNAFMCFAALNARCAAEQTQTVTREAPTITVLP--GKEKSP 455
           + P+ + G   G+   SR+ +  +C +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP
Sbjct: 36  VSPLSAVGLSSGL--GSRRKSLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSP 95

Query: 456 QLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 513
            LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAFLG LKDKE E  Y+  RRR
Sbjct: 96  SLDDGGDGFPPRDDGD-GGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 151

[Close]

BLAST of Spg015889 vs. TAIR 10
Match: AT1G30475.1 (BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 148 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 14; Metazoa - 63; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-25
Identity = 73/138 (52.90%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 371 RRDTFQLQTPNERRQP--VIAKAEPLFLKPIPS-TGTRGGVLYSSRKNNAFMCFAALNAR 430
           R  +F     ++RR P  V  + +P      PS       V+ S  K   F C +ALN++
Sbjct: 50  REKSFTSNGNSQRRYPTSVSMQRQPWSQSKFPSLQDAVQPVVVSKNKRPVFACNSALNSK 109

Query: 431 CAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGF 490
           C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG GGGGGGGGGG+ SGGF
Sbjct: 110 CSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPRDDG-GGGGGGGGGGSSSGGF 169

Query: 491 FFFGFLAFLGFLKDKESE 504
           F FGFL F+G+LKD E E
Sbjct: 170 FLFGFLLFMGYLKDLEGE 186

[Close]

BLAST of Spg015889 vs. TAIR 10
Match: AT1G30475.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-25
Identity = 73/138 (52.90%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 371 RRDTFQLQTPNERRQP--VIAKAEPLFLKPIPS-TGTRGGVLYSSRKNNAFMCFAALNAR 430
           R  +F     ++RR P  V  + +P      PS       V+ S  K   F C +ALN++
Sbjct: 21  REKSFTSNGNSQRRYPTSVSMQRQPWSQSKFPSLQDAVQPVVVSKNKRPVFACNSALNSK 80

Query: 431 CAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGF 490
           C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG GGGGGGGGGG+ SGGF
Sbjct: 81  CSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPRDDG-GGGGGGGGGGSSSGGF 140

Query: 491 FFFGFLAFLGFLKDKESE 504
           F FGFL F+G+LKD E E
Sbjct: 141 FLFGFLLFMGYLKDLEGE 157

[Close]

BLAST of Spg015889 vs. TAIR 10
Match: AT1G30475.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-25
Identity = 73/138 (52.90%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 371 RRDTFQLQTPNERRQP--VIAKAEPLFLKPIPS-TGTRGGVLYSSRKNNAFMCFAALNAR 430
           R  +F     ++RR P  V  + +P      PS       V+ S  K   F C +ALN++
Sbjct: 21  REKSFTSNGNSQRRYPTSVSMQRQPWSQSKFPSLQDAVQPVVVSKNKRPVFACNSALNSK 80

Query: 431 CAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGF 490
           C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG GGGGGGGGGG+ SGGF
Sbjct: 81  CSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPRDDG-GGGGGGGGGGSSSGGF 140

Query: 491 FFFGFLAFLGFLKDKESE 504
           F FGFL F+G+LKD E E
Sbjct: 141 FLFGFLLFMGYLKDLEGE 157

The following BLAST results are available for this feature:

BLAST of Spg015889 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540533.1	8.1e-80	86.26	uncharacterized protein LOC111800870 [Cucurbita pepo subsp. pepo]	[more]
XP_023005574.1	8.9e-79	85.71	uncharacterized protein LOC111498519 isoform X1 [Cucurbita maxima] >XP_023005575...	[more]
KAG6596785.1	2.9e-77	84.62	Protein YELLOW LEAF 1, choloroplastic, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023553392.1	3.8e-77	84.70	uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6577548.1	6.4e-77	83.70	Protein YELLOW LEAF 1, choloroplastic, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Spg015889 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0E3V2	5.0e-08	44.44	Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
F1SZ44	1.5e-07	49.40	Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX...	[more]
F1SZ42	2.5e-07	49.40	Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX...	[more]
F1SZ41	2.5e-07	49.40	Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=3...	[more]

BLAST of Spg015889 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZM4	4.3e-79	85.71	uncharacterized protein LOC111498519 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HQC3	5.3e-77	84.15	uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127...	[more]
A0A6J1F258	5.3e-77	84.15	uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC1114387...	[more]
A0A6J1GD79	9.0e-77	84.07	uncharacterized protein LOC111453117 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1CP11	1.5e-76	84.07	uncharacterized protein LOC111013392 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Spg015889 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56200.1	6.1e-33	63.87	embryo defective 1303	[more]
AT1G56200.2	6.1e-33	63.87	embryo defective 1303	[more]
AT1G30475.1	1.6e-25	52.90	BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G5620...	[more]
AT1G30475.2	1.6e-25	52.90	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G30475.3	1.6e-25	52.90	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..476
None	No IPR available	PANTHER	PTHR34938:SF1	PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL	coord: 391..511
IPR040299	Protein FERTILITY RESTORER RF2-like	PANTHER	PTHR34938	PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL	coord: 391..511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015889.1	Spg015889.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009507	chloroplast