Spg015873 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015873
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsignal recognition particle 14 kDa protein
Locationscaffold6: 43183732 .. 43189811 (+)
RNA-Seq ExpressionSpg015873
SyntenySpg015873
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACCTCTCTCTCAAATCCCAACTATTTTTTCTTCGCCTCAGACTCTTAAAGCCCGCATCTTGCTTCCAACCCGCCATGAGCCATCGAAGGATTCTACTGGGAACTCTTGGCCGGCAGCTTTAGGTAACCCTCGTTCTATATCCTTTTAGGACGAATGAAAATGTGAGAGAGAACGAAACCTGGGAGAGGATAAGAGGGATAAGAGAGATAAGAGAGAATTCTTACTTCTTTACTTAGTTTTTGTATGCATGTAGTGTAGAGAAATTTATACTGGACATATTGAAGAGATGGGCAATCGAGGTTTAGATATGAATTGGGTATTTTAATGATCCAACAAACTGTGAAATAGAATGTTAAGAGAAGAAATTTAGATAATGTTGTTAACAATATACTAAATGATTAAATATATACCAGTTAACAGGTTAAGCTTTTGGATTTTGTAGGATTTAACAACCTATATCAATACTGGGTGGAAAAAACCGAACCGAATCTCGAACCGGTTCGGTTCAGGTTTTTTTCTGACCGAACCGAACCGATTCACGTATTCTTTACCCGAACCGAACTTTCCTGGCGTTTTTTTTTTTTTTTTCGATAGTCTAACAATCGTTTGTTTCCACTTCCATTCGCAATCTCTATTCTCACTTTCGCAGTTCGTCTCTTCATCGCCTGCGTAATCACCTTCAAAATCCACCGCCGTCAACCTCTTCTGAAGGATTTGTTGAGGCTTGACGACAATGGGCTGCTGAAATCAAACAGGTCAGTGGGTTTTTCTTCCACTCCAGAACAAGCTATGGAATTTCCCTTTTTTTTCCTCGACAAAACTTCCATTCGTCAATCTCTCTTCTCACTTTTACTCGATTCAATTTCTCCTCGCATCTTCTTTGCCCGTGCTTGTCGCCATCGCCGAGCAGCTTGCTGTAGTGTTCTCTGGGTTTCCGCCGCCGTCGAAGCTGTGCCGTCTGGGTTTATTCGCCATTGCCGCCGCCGCTGAAACTTGCTGTCGAGTAAGGATTTCAAAATTCTTTATGATTATATGCTTGAATTTATCTTCTACATCAAATGTTGGCTTTTCAAGTTATGAGGTCTGATGTTCTGAATTGTGTGTTTGTTATGGCTGCTGCTTTGAGCTTTTTGGTTCTCTTTCCTGAGTTTTTGCATATTGTTTGACAATCGACGTCGTTATTTGAAGAGGACATTATCTATTTAAATGTTATGGAAGAGCTTTTTGTCCTTAGCTCGGAGTTCGGGTTCATCCCGGTTTGTGATTTTATATCAGTTATGAAGTTGTTTGACTTCTTATAGAGGGGAAAAAAAAAAGACACTCTGTCTGTCCTGTTTCTGAAACAACCATTGACATGGGATAACTCATTTAAAAAGAAAAAGCCATTTTGTAGCTTGGATTTCCCTTTTTCTTTCCCCTTTAACTTGGAAACTTTAGATGAATAGTTTGTTTATATTATTGGGTATTGTATTGCGATATTCCCAAATCCCATGGTCGTATTTTTAGCTTTGTAAGTTGAAAAAACAATCTATAGTACTGAGATCTCAGTGCTCTACTTGTGAAGCCCATGGAGAATTTTTCTGTTTTTAGGGCAAGTGGGTTTTTGTTGAGGTTCGTTTAAGTTTGAATTGTTCTGGTCTTTTGAATTTCAAGTTACTGAAAGTTCTAAAAGAATAGCCGATATTATTATGGTATATTATATGAATGGAAGCTGTAGAATTAAAGGCAATGTATCCTGTATTGTAAACGGATAGATGCATCTACTAAAGAAATTCAAAACCTACCTTCAGGGTACCCATTTCTTAGTACAAGGTGCAAAAAAGAGATGAGTAGAAGCCTACCATTACCAAAAGAAACCATAAAAGTAATACAAATGAATTGAAACTCAAAAGAAAGCCAAAATAAATTCATGTACCCATTCCCCAATACTAAATTAGAGAGCCAATAAAAGCAACATTAGTTGGACCAAAATGTCAAGAGGAAATATAGAGTAGAAACGAAGTTGAGTTTATAGTTATTAATGTTTGAGTTTATAGTTATTATTGGTTTTGCAATAGCTTGGTCTTGTTTTGTGAATTTTGGTTTGACTTTTATCCCAGGATGACTTCGTCTTTTACAAACCATTTTATAGTTATTAATGTTTGAGTTTATAGTTATTAATTTTGGTTTGAGTAACTGTAATCTAGTGGATGAAACTGCAAGTTCTTGATCTTAGTGTAAACCATTTTGTTGTCTCTAAAGGTTGCAGTTGCTGGAGATCGATGGAGATCTTCAGGCTCTTATGGATGATTTCTGTGAAACCAACTTAACTTGTGCTGCAAAAGCTGCTTAGGACCAAAACAAAACTTCTCTGCCTGAATTGGATGTTGTTTGTTTTGATATTTTTGAACTTGGCTTGGGTTTGGATCTGTCTTCTCATATCTTGTCAATTCTGATCTGGGTTCTATGTATTGTTCTCGTTTGAACTGGTTCAATGTTTCTTTTTCTTAATTTGAGTTGGGTTTGTTTCGTTCATGTACTTTGCCACTCAAGTGAAAGAGAGAAAATGGGGGATTTTTTCTTCTTATGTTTTGGCTCTAAATGGTGGAATTTGATATGTTTTGGCTCTAAAGGTTGCAAATGGAAGACAAGTACATTAAGAAATTTTACACCCCTACTCACTGCTTCGTCTCACTCCGTTGAAGGTTGAACAGACGTCCATTGACTCGGTTGCTCATATATCTCAAGATCTGCATCACTACTATCGCCATGGTAATTTCATTTTCTCTTCGTCTTTCTCATCTCTTGTTTGAATCATTCTATCCATTCATGTTACAGCATCTGCATTTTGATTTTTCATCTTTATCTCATAATTTGACCTGATTAAGGAATATCTATGTCTCGTTGTTGGTTTTGATGAATTTTTTTTTTTTTAGATTTTGCTTTTTGATTACTGCAATTGTGGATTTGTCTTTTAGCGTTGTGCATATGAATGAAATTCAAGTTGCGTGTACTGCATTATTGCATCTTTTCTCCAGTTCCACCACTCGGCTCGATCTTATTTTCAATGGTTGCTTTTCTATTTAAGCGGAGGAAATTGGGCCTAGTGGTGTTTTTTATTCTAATTATGATATAATATCTGATTGATCACATTTTTTAATCTCTATTGGTTGGAAGTCTTGGTGGAAATTCATTCTGTTGCAGGAGTTTTAGTTCTTTCATTCAAATTTGGCAAAAAGAATTGCTGAATTTGCCAAGTACAGACTCTTCGATGGCAGTTAGGTCTGTAAAAATCGACCAATTAATGGACTTACTCCCTTATGGTAGAAAATAATGATTAAAGAAAAATCTAACGACAGATGGTATTGGCCAAACTATAAGAGAAGGAATTGAAATGCTATATCACCTCATTTGCCCCCAGGAACATTGGATTGGCCCTTGAGTTTATTTGGCCAACTTGGATTCAAATGGGGCGTGGTTCTTTGGTAAGTCTTGAGTAGCCAAACTATAAAAATATGAAAGTTATTTGGTATTTGAATTTCTAACCATAACCCATAGTTTGTTATAAGTTCCAATTAAACTAGATGTACCATCGTTTCTCTCGAAATTGCTTAGTGCAGCTTCTGCATATTTTGCATTAGTCTTACAAAGTTTTTTCTTCCAACACTTCCTCATGCAACCTAGTAATTTTCTCTGCCAATGGTCCAAGAGAAAGCATTTAGGATCCCTCTCACTCGGGACTTCATATATGGACTTAATTTTCATGTTATTAAATTTGAATTTGTATGGAGACAAGTATAAGTCCTGATGTTGTGGTGTGTCTGTCTTAAGCATCTTAATAGGTTCCCCAATGTTTTCTTTCTAACTTTGTTTGATAGAAAAGTCAGCTTCCATTGGGTTGGAAAACCTGATCAACCCTAAAGTAATGAACAGTACAGATTCTTTCTTCAAAAGAGAAGTCCACTATTATATGTTGTCACCAAGGCATATAGCTTTTGATGATACGTACTCCAACATTTCCTAGGCTCACTAAGCTTCTCAGTTTTCACTAAGCAAACCAAATTCTGGAAGTTCCTGTTTCAGGGTTTCAAAACCTTGCTGCTGTATTCGACTTGCTGAAATTTGCATCTAGAGCTAACCTATTGGCACATATGAAAGGAAAGAAGCAACGGAATCTTCAATGACAAGTGTAGACCATGTAAATTTTATGATCTTATTCAGTTTACGACTAGAGTACCTAGAGTCTTTTACAGTGTTTTTCTTTGGCTGGTAGATGAACAATGATTTTTATAATTACTCCACTTTTTTGATCAATGAGGGTATTTTTTTTTTTAAAATAAAAAGACCTCCCCTTTCAAGCAAGGAGTGTGTGCATTAACTCACTATGCAAGCACATGTAGTCGTAGGTAGTAATTTGTGAATCAAGGTTGATCCTACAAGGACTAATTTATGTAAATTTGATAAAATTGAGTCCCAACCAAAATGTTAGAGGTTTGAATCCCCCCTTCCACATATTGAACTGAAAAAAGTGACAACTCAACTCCTAAAAAAATCTTCAACAGAAAATGCAAAAATGAAGAACAAATGATGCATTTCACTCCATTTAATTCAAAACTAAGTAAAGAAAGATGTTAAATTAAGCCCATTTTATGGCATTATCAAAAACTGTCTCTTGCCTCCTTGGCCTTGATTTTCTATGGTTGATTCTTTAATGGACGTATCTGTTCCTTGTCAACTACTGGAAAAGATGTCAGATTGCGAGCAGGAGTTCACTCATGAGTTTCCTACAAAGAGAGGATGAACTGTTGTTATTGAGTAGAGTTGCAAAAAATTCACTGCAGATAGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAAGAACACAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTATTTGGACGACAGTACTTAAATTGACTTGATTTATGCAATTTATCAGTCCGAATAATGAGATATGCACATTACCATTTTATTTGTCTCACTGATATTTGGACTATACTAAGTTACTTGATTTATGGAATTTATCGATCCAAATTCTGAGATGTGCACAATTAGCATTAAACGTTTCATTCAAGATTAGAATTCTTTGGCTTGATTATGATGTTGATAAGTTCCTTTTCTTTTGATTTAGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATGTATGTATATCAGCTTGTTGATTAGTTTCGTGAATCTTTATGATAAACTTTAGAACTCTGATTAGAAACTATACTGTATCTCATATTGTTGCAGCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCGGTAAGTATTGACTCATCTTTTAGCCTCTCTCTCTCTCTTTTTTTACTCATCGTTTTTATTTCGAGGGTTTCTAACTTTCTTGAATCCGAAGCATTTGTAACACTTTCTCCTGAACTGGCTAGGTTGGAGCAAAAGATCACCTGAAATTTCTAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGAAGTTAAATGCAGAGGAAAGAAGAGGAGAGGTAGGATTTTGGAATTTCAGGATTTGAAAGATACCATTTTGTCATTTGTTTAGCCATTTTTTCCCTCAAAAAAGGATTAACATGTACATGTGATTTTACCATGGGATTATCTGGAAGTTTTGCATACTCTCTTCCTAAGTTATTAAAAAAAAAAACCTTGCTTAAACGTGGGATCACAAGCTTTTTATTGTTTGTGATTCATCTGGGAACTTGTGGATGGAAATTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGATTCAAACTACAGATCTCGTGGTCAATAGTACAACGTTATGCCAGTTGAGCTATGCTCTTGTTAGCTTTTAG

mRNA sequence

GCACCTCTCTCTCAAATCCCAACTATTTTTTCTTCGCCTCAGACTCTTAAAGCCCGCATCTTGCTTCCAACCCGCCATGAGCCATCGAAGGATTCTACTGGGAACTCTTGGCCGGCAGCTTTAGTTCGTCTCTTCATCGCCTGCGTAATCACCTTCAAAATCCACCGCCGTCAACCTCTTCTGAAGGATTTGTTGAGGCTTGACGACAATGGGCTGCTGAAATCAAACAGGTCAGTGGGTTTTTCTTCCACTCCAGAACAAGCTATGGAATTTCCCTTTTTTTTCCTCGACAAAACTTCCATTCGTCAATCTCTCTTCTCACTTTTACTCGATTCAATTTCTCCTCGCATCTTCTTTGCCCGTGCTTGTCGCCATCGCCGAGCAGCTTGCTGTAGTGTTCTCTGGGTTTCCGCCGCCGTCGAAGCTGTGCCGTCTGGGTTGCAGTTGCTGGAGATCGATGGAGATCTTCAGGCTCTTATGGATGATTTCTATAGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAAGAACACAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCGGTTGGAGCAAAAGATCACCTGAAATTTCTAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGA

Coding sequence (CDS)

GCACCTCTCTCTCAAATCCCAACTATTTTTTCTTCGCCTCAGACTCTTAAAGCCCGCATCTTGCTTCCAACCCGCCATGAGCCATCGAAGGATTCTACTGGGAACTCTTGGCCGGCAGCTTTAGTTCGTCTCTTCATCGCCTGCGTAATCACCTTCAAAATCCACCGCCGTCAACCTCTTCTGAAGGATTTGTTGAGGCTTGACGACAATGGGCTGCTGAAATCAAACAGGTCAGTGGGTTTTTCTTCCACTCCAGAACAAGCTATGGAATTTCCCTTTTTTTTCCTCGACAAAACTTCCATTCGTCAATCTCTCTTCTCACTTTTACTCGATTCAATTTCTCCTCGCATCTTCTTTGCCCGTGCTTGTCGCCATCGCCGAGCAGCTTGCTGTAGTGTTCTCTGGGTTTCCGCCGCCGTCGAAGCTGTGCCGTCTGGGTTGCAGTTGCTGGAGATCGATGGAGATCTTCAGGCTCTTATGGATGATTTCTATAGGAATGTTGTTGCCAACACCTTGCAGATTCTACTTAAGAACAAGAACACAATTGCTATATCAAGTTTAGTCGTTGTCTCACTGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCATCACTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGACAATTTCAACTTCGGTTGGAGCAAAAGATCACCTGAAATTTCTAGCTTCCTATTCAACCATTCTTAAAGCTCACATGACTGCTCTTAAAAAGAGAGAGAGGAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGATCTGAAGAAAAAACCCAGGAAAGGATGA

Protein sequence

APLSQIPTIFSSPQTLKARILLPTRHEPSKDSTGNSWPAALVRLFIACVITFKIHRRQPLLKDLLRLDDNGLLKSNRSVGFSSTPEQAMEFPFFFLDKTSIRQSLFSLLLDSISPRIFFARACRHRRAACCSVLWVSAAVEAVPSGLQLLEIDGDLQALMDDFYRNVVANTLQILLKNKNTIAISSLVVVSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRKG
Homology
[Close]
BLAST of Spg015873 vs. NCBI nr
Match: XP_038893990.1 (signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-50
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKAPEAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRK 117

[Close]
BLAST of Spg015873 vs. NCBI nr
Match: XP_038893989.1 (signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 209.9 bits (533), Expect = 3.1e-50
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 193 VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 252
           VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD
Sbjct: 9   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 68

Query: 253 GKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           GKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKAPEAEK LKKKPRK
Sbjct: 69  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRK 124

[Close]
BLAST of Spg015873 vs. NCBI nr
Match: XP_022954536.1 (signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022954537.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022994924.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_022994925.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023541199.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023541200.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo] >KAG6573374.1 Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012543.1 Signal recognition particle 14 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 4.0e-50
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]
BLAST of Spg015873 vs. NCBI nr
Match: KGN66307.2 (hypothetical protein Csa_023187 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 9.0e-50
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 190 VSLVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR 249
           +++VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR
Sbjct: 82  IAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIR 141

Query: 250 ATDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           ATDGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 142 ATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 200

[Close]
BLAST of Spg015873 vs. NCBI nr
Match: XP_004145229.1 (signal recognition particle 14 kDa protein [Cucumis sativus] >XP_008444601.1 PREDICTED: signal recognition particle 14 kDa protein [Cucumis melo] >XP_023001491.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023001492.1 signal recognition particle 14 kDa protein-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-49
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]
BLAST of Spg015873 vs. ExPASy Swiss-Prot
Match: O04421 (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 301
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of Spg015873 vs. ExPASy Swiss-Prot
Match: O04433 (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 79/117 (67.52%), Postives = 98/117 (83.76%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +V+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + +  KM   G+ +EYRCL+RAT
Sbjct: 1   MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKK I T++ AK++LKF ASY+T+LKAHM ALKKRERKDKKKA E EK  +K P+K
Sbjct: 61  DGKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAEVEKIPEKAPKK 117

[Close]
BLAST of Spg015873 vs. ExPASy Swiss-Prot
Match: P37108 (Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-16
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 251
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 252 TDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEA 299
           TDGKK IST V +K+  KF  +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of Spg015873 vs. ExPASy Swiss-Prot
Match: Q4R5C7 (Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-16
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 251
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 252 TDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEA 299
           TDGKK IST V +K+  KF  +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of Spg015873 vs. ExPASy Swiss-Prot
Match: Q5RBX7 (Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-16
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 251
           +VLL+ + FL ELT +F++    GSV++TLK+   ++K    K T  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRA 60

Query: 252 TDGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEA 299
           TDGKK IST V +K+  KF  +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of Spg015873 vs. ExPASy TrEMBL
Match: A0A6J1K2P1 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490504 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-50
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]
BLAST of Spg015873 vs. ExPASy TrEMBL
Match: A0A6J1GR82 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456777 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-50
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKD+KKAPEAEKD KKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRK 117

[Close]
BLAST of Spg015873 vs. ExPASy TrEMBL
Match: A0A6J1KGP7 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495612 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 9.7e-50
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]
BLAST of Spg015873 vs. ExPASy TrEMBL
Match: A0A0A0LYE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 9.7e-50
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]
BLAST of Spg015873 vs. ExPASy TrEMBL
Match: A0A1S3BBI8 (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 9.7e-50
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEKDLKKKPRK 309
           DGKKTISTSVGAKDHL+F ASYSTILKAHMTALKKRERKDKKKA EAEK LKKKPRK
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRK 117

[Close]
BLAST of Spg015873 vs. TAIR 10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-43
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 301
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of Spg015873 vs. TAIR 10
Match: AT2G43640.2 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-43
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 301
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of Spg015873 vs. TAIR 10
Match: AT2G43640.3 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-35
Identity = 80/109 (73.39%), Postives = 93/109 (85.32%), Query Frame = 0 

Query: 192 LVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 251
           +VLLQLDPFLNELTSMFE+S EK         +SLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEK---------ASLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 252 DGKKTISTSVGAKDHLKFLASYSTILKAHMTALKKRERKDKKKAPEAEK 301
           DGKKT+STSVGAKDH +F ASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 100

The following BLAST results are available for this feature:
BLAST of Spg015873 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893990.12.4e-5096.58signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida][more]
XP_038893989.13.1e-5097.41signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida][more]
XP_022954536.14.0e-5095.73signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] ... [more]
KGN66307.29.0e-5094.12hypothetical protein Csa_023187 [Cucumis sativus][more]
XP_004145229.12.0e-4995.73signal recognition particle 14 kDa protein [Cucumis sativus] >XP_008444601.1 PRE... [more]
BLAST of Spg015873 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O044211.4e-4282.57Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
O044332.2e-3567.52Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39... [more]
P371086.7e-1645.37Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1... [more]
Q4R5C76.7e-1645.37Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP... [more]
Q5RBX76.7e-1645.37Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2... [more]
BLAST of Spg015873 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K2P12.0e-5095.73signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1GR822.0e-5095.73signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata... [more]
A0A6J1KGP79.7e-5095.73signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O... [more]
A0A0A0LYE09.7e-5095.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1[more]
A0A1S3BBI89.7e-5095.73signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034878... [more]
BLAST of Spg015873 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43640.11.0e-4382.57Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.21.0e-4382.57Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.31.8e-3573.39Signal recognition particle, SRP9/SRP14 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 192..308
e-value: 1.0E-36
score: 128.3
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 193..287
IPR003210Signal recognition particle, SRP14 subunitPFAMPF02290SRP14coord: 195..284
e-value: 1.6E-21
score: 76.7
IPR003210Signal recognition particle, SRP14 subunitPANTHERPTHR12013SIGNAL RECOGNITION PARTICLE 14 KD PROTEINcoord: 138..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..309
NoneNo IPR availablePANTHERPTHR12013:SF3SUBFAMILY NOT NAMEDcoord: 138..300

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015873.1Spg015873.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G protein-coupled receptor signaling pathway
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding