Spg015836 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCCAACAAATCAATCCAACACAAGCATAATTTCAAACAGCAGAGATCAAAAGTCGAAGAAGCACTCACCGAAACTCACTCAGGCATTTCGTCGAACGTCTTCTCGGCACGCACCAGCGCCAAATCGAAACATGAATCGATCTCACCGATTCCGCCTCAGATCAACAACAACAAACATCAAGACGATTACGAACCTCAGATTCTCTGCTGCGGATGCGATCGGCCGATGATGTTGATCGGAGTGGAGAACTCGACTCTGTGCTACATTTGCAAGGCGACGCCATCGACGTACGTGTGTGCGCCATGTTCGAGCGGATTGATAAACTTTTTCGACAGAGGATGTGCGGAACTGCCGAGAGAGATCGATTATCCGTATCACCACCACGCTCTGAGGCTGAGATATCGAAAAAATTCTTACTGCTCCGCCTGTCTCCGGCGATCCGACGGCTTCAATTTTGGTTGCGAGAAATGTAAGTTCATTGTCGATGTTAAATGTGCTCTCAGAGAAGGCAAAGGCAAAGGCAAACCATATATGTAA ATGGACTCCAACAAATCAATCCAACACAAGCATAATTTCAAACAGCAGAGATCAAAAGTCGAAGAAGCACTCACCGAAACTCACTCAGGCATTTCGTCGAACGTCTTCTCGGCACGCACCAGCGCCAAATCGAAACATGAATCGATCTCACCGATTCCGCCTCAGATCAACAACAACAAACATCAAGACGATTACGAACCTCAGATTCTCTGCTGCGGATGCGATCGGCCGATGATGTTGATCGGAGTGGAGAACTCGACTCTGTGCTACATTTGCAAGGCGACGCCATCGACGTACGTGTGTGCGCCATGTTCGAGCGGATTGATAAACTTTTTCGACAGAGGATGTGCGGAACTGCCGAGAGAGATCGATTATCCGTATCACCACCACGCTCTGAGGCTGAGATATCGAAAAAATTCTTACTGCTCCGCCTGTCTCCGGCGATCCGACGGCTTCAATTTTGGTTGCGAGAAATGTAAGTTCATTGTCGATGTTAAATGTGCTCTCAGAGAAGGCAAAGGCAAAGGCAAACCATATATGTAA ATGGACTCCAACAAATCAATCCAACACAAGCATAATTTCAAACAGCAGAGATCAAAAGTCGAAGAAGCACTCACCGAAACTCACTCAGGCATTTCGTCGAACGTCTTCTCGGCACGCACCAGCGCCAAATCGAAACATGAATCGATCTCACCGATTCCGCCTCAGATCAACAACAACAAACATCAAGACGATTACGAACCTCAGATTCTCTGCTGCGGATGCGATCGGCCGATGATGTTGATCGGAGTGGAGAACTCGACTCTGTGCTACATTTGCAAGGCGACGCCATCGACGTACGTGTGTGCGCCATGTTCGAGCGGATTGATAAACTTTTTCGACAGAGGATGTGCGGAACTGCCGAGAGAGATCGATTATCCGTATCACCACCACGCTCTGAGGCTGAGATATCGAAAAAATTCTTACTGCTCCGCCTGTCTCCGGCGATCCGACGGCTTCAATTTTGGTTGCGAGAAATGTAAGTTCATTGTCGATGTTAAATGTGCTCTCAGAGAAGGCAAAGGCAAAGGCAAACCATATATGTAA MDSNKSIQHKHNFKQQRSKVEEALTETHSGISSNVFSARTSAKSKHESISPIPPQINNNKHQDDYEPQILCCGCDRPMMLIGVENSTLCYICKATPSTYVCAPCSSGLINFFDRGCAELPREIDYPYHHHALRLRYRKNSYCSACLRRSDGFNFGCEKCKFIVDVKCALREGKGKGKPYM Homology
BLAST of Spg015836 vs. NCBI nr
Match: KAG6579395.1 (hypothetical protein SDJN03_23843, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.4 bits (376), Expect = 2.9e-32 Identity = 71/163 (43.56%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of Spg015836 vs. NCBI nr
Match: XP_028056396.1 (uncharacterized protein LOC114260456 [Camellia sinensis] >THG20191.1 hypothetical protein TEA_005576 [Camellia sinensis var. sinensis]) HSP 1 Score: 71.6 bits (174), Expect = 7.6e-09 Identity = 47/127 (37.01%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Spg015836 vs. NCBI nr
Match: XP_035551576.1 (uncharacterized protein LOC109008056 [Juglans regia] >KAF5454028.1 hypothetical protein F2P56_023726 [Juglans regia]) HSP 1 Score: 70.1 bits (170), Expect = 2.2e-08 Identity = 34/91 (37.36%), Postives = 45/91 (49.45%), Query Frame = 0
BLAST of Spg015836 vs. NCBI nr
Match: XP_023897934.1 (uncharacterized protein LOC112009826 [Quercus suber]) HSP 1 Score: 69.7 bits (169), Expect = 2.9e-08 Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of Spg015836 vs. NCBI nr
Match: XP_023898489.1 (uncharacterized protein LOC112010378 [Quercus suber]) HSP 1 Score: 69.7 bits (169), Expect = 2.9e-08 Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of Spg015836 vs. ExPASy TrEMBL
Match: A0A4S4ETH4 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_005576 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.7e-09 Identity = 47/127 (37.01%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Spg015836 vs. ExPASy TrEMBL
Match: A0A6P9EWE7 (uncharacterized protein LOC109008056 OS=Juglans regia OX=51240 GN=LOC109008056 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08 Identity = 34/91 (37.36%), Postives = 45/91 (49.45%), Query Frame = 0
BLAST of Spg015836 vs. ExPASy TrEMBL
Match: A0A4S4ETF5 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_005558 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-08 Identity = 46/134 (34.33%), Postives = 62/134 (46.27%), Query Frame = 0
BLAST of Spg015836 vs. ExPASy TrEMBL
Match: A0A7N2L4C4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-08 Identity = 49/158 (31.01%), Postives = 71/158 (44.94%), Query Frame = 0
BLAST of Spg015836 vs. ExPASy TrEMBL
Match: A0A2N9I7B7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48057 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.1e-08 Identity = 39/124 (31.45%), Postives = 61/124 (49.19%), Query Frame = 0
BLAST of Spg015836 vs. TAIR 10
Match: AT2G21840.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05 Identity = 33/102 (32.35%), Postives = 48/102 (47.06%), Query Frame = 0
BLAST of Spg015836 vs. TAIR 10
Match: AT4G01910.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04 Identity = 26/83 (31.33%), Postives = 40/83 (48.19%), Query Frame = 0
BLAST of Spg015836 vs. TAIR 10
Match: AT2G21830.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 42.7 bits (99), Expect = 3.5e-04 Identity = 30/105 (28.57%), Postives = 47/105 (44.76%), Query Frame = 0
BLAST of Spg015836 vs. TAIR 10
Match: AT4G16015.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 42.7 bits (99), Expect = 3.5e-04 Identity = 26/87 (29.89%), Postives = 44/87 (50.57%), Query Frame = 0
BLAST of Spg015836 vs. TAIR 10
Match: AT5G42840.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 42.7 bits (99), Expect = 3.5e-04 Identity = 28/105 (26.67%), Postives = 45/105 (42.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|