Spg015764 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015764
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-asp_proteas domain-containing protein
Locationscaffold10: 18060008 .. 18063952 (-)
RNA-Seq ExpressionSpg015764
SyntenySpg015764
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCACCCGATAGTCGGAGGTCGACGGTAGCGCCTGGTAGTCAGAGATCAACAGTGGCGGTCCGTCAGCGGAGGTCGGCGGCGACCGATAATCAGAGGTCGACGGTAGCGGTTGGTCGCGACCAGGAGTCAGAGGTCGACGATGGCGGCCACTCGACCGACCAGTAGTCGTAGGTCGAAGGTGGCGGTCGGTCGGCAACGACTGATAGTTAGAGGTCGACGGTGGCAACCGGTCGATAGAGGTCGATGGCGGCGAGTAGTTTAAGGTCAACAGTGGCAGTTGGTCAGCGGAGGTCGACAGCGACAGGTCGTTGGAGGTCAACGACAACCGGTAGTCGAAGCGATGGTAACAATCTGCCGTGATTGTTAATCAGAGGTCGACGGAGGTCAATGATGACCGGTAGTCAGAGGTCGATGATGGTGGCAGGTCGACGACTGGTAGTCAGAGGTGGACGGTGGCGGTCGATCGGCGGGGGTTGATAAGAGCCGATAGTCGGAGGTCTACGGTGGTGGTCGGTTGGTGGAGTCGACAGCGGCCGGTCGTCGGAGGTCGACAGTAGCGATCGATCGCGGCCGGTATTCGGAGGACGACGGATGTTGGCGACGACCGGTAGTCCGAGGTCGATGGAAGTCGGCGACGGTCGGTAGTTCGAGGTCGATGGTGGCGGTCGATCGGGAGCAGTCAATAGTCAAAGGTCGACAGAGGCGGTCGGTTGGCGACGACCGATAGTCGGAGGTTGATTGTGGCGACTGGTCGACGGCGACCTCTGGTCAGAAGTCAACAATGGTGGCCAATCAATGGAGGTCAGCAGCGGCCGATAGTCAGAGATCGTTGGAGGTGATAAAAAAAGGAAAAAATTTAAGAAATAACATAAATAATAAAAAAAAATGAAAGAGAAAGAAATAACGAAAAAAAGAAAAAAATTAAAAAAAGACGAGGAAATGGTTAAAAAAATAGAGGAAGAGAAGAGATTGGTGTAGGAATGGGAGGGAGAGATGGATACATGTCTTAAAGATAGAAAAAAAACAGAAACAGAATTTGAGAAACAACTTTTTGTAGTTTCTCAAATTTGTCCTCTTTTTTAGAAACGTTTCTAGAAATTTAGAAAGAAGAAACAGGGCTGAGTTATCAAACAAGTCTGTTTCTTAAAAAATGAGAAACGGGAACAAGAAACAGGAAACAGGAACGTTATCAAACGAGCCCTAAGCTTATAAATCCTACTTCCACCAACAAGTTTCTTTGTTTTTCTAATACCTTTCTTTCTTTCTTTTTAAAAAAAAAAACCAATCAAATTTTGAAAACTAAAAAAAGTAGTTTTCAAAAACTTATTTTTGTTTTTAGAATTTGGTTAGGCATTCAAATGTGTCATTGACAAAGATGAAAACATGGTAGGAAAATTGGGAGAAAACAAGCCTAATTTTCAAAAACCAAAAACCAAAACCAAATGGTTATCAAATGGGGCCTAAATTTTCAAAATTGTGAATTTGAGACTTCATTGAAAATCTCTCATTCATATAATTCAAAAATTTAATCACCTAAACTTCAAACAATAACTATTATGACCACCTTTTTCTTCTTCATAGCGTCATCGGCATGACCACCTCGTCAGCATGTCCTTCGCACTGCGACACTAGTTCACTTCGGTGCTCACTTCAAATTATGATGAATTATCTAAGAATATATCGTTGTTATGCATTAATACAAGTATAAATTAAGCACTATCAAGTAATACTTGAATACTCCAGGGTCAGAACACAGGGAAGGGGAATGAAGCAAATGAACACTTTTAACTCACTATACTCAAAGGCATGGAGCTGTGTTGAACATTGAGATAAAGAGATTGATCGTGCAATAAATATGATAGCACCTAATTCGTGTTATCTTATTACTGCTAATCTAAGCTTGTTAGAAGAATTTTATGCCTTAATTGTCTTATTTTCAAATAATTCGAGCATATGTAGCATTGGGAGCCAACCACACAAATTGGTGCTAATTCGGACCAATTAGAGTGTTTTTGAGCCATCTTGAAGTTCTTGGATGACGAGGAGGTGAAGAGACCTGAGCGGAATGAAGCGGGCCTGAAGAATAGTGCCACGGAGTCAAAGGTTCAAGCCCCAAGTCGAGAAAGACCGAGATAAAATCAAGAAAAAGGCAGCAAGCTGGAAAAGGAGTCACCGTCGAGACGCTGACGCGAATTCAAACGGAAGACATATCCGTAGCATCTCGACGCTGTTTCCTAGCATCTCGACGCTACGACGATTAGTATAAATAATAGGGTTTGGTTTAGTCTGTCGTTAGGTCAGATTTTACGAATTCTTCTATTCTTAGTTCGTTTTTCTTTCATCTTTTATTGTTTCTTTGATTCCTAGACTGATTAGGATGTATTCCTTGATTAGTTTTGGATTGTATTCTTCTATTATGTTAGCTTAAACCCTTTTTCATTGGATTCTTGGGATGTAGTTGGATTGAATTGATATATCATTTGGTTTGCGGGCGCATTTTGATCGCATATCCCACATCCTCAAGTCCAGATGCAGCCGCAAATCTCCAACTTCACCTCATTTGCTCCACTAGCCTTTAATCTCCTCTTGCGGGTGCATCTTCCTCGTAAAGTCCTCTGCACAAAAACATTAACTTGGATCAATTCTTACAAAAATATCTCTTTTTTTTACACTTTAAACTTAAATTTTACATTTCTAAGATTTTCTTCATGATTCTACAACTTTTGCTAAAATGACTTGAAATGATAAGATTTTAAACACAAAGCCTTTGTTTTCCAAACAATAACCTAGGTTTTTAAGGCTAAATAACACACATAAATGAGCGTTATCAAGTGCCATCTCAAAATGGGGAGTAGAACCATAATGGAAATCAATAGGCGCTGCCTAACAATCCCCAAAATCCAATTCTTATTGCAGAGGAGAGAAATCAGGCCATTTGAGATTACGTTGCGTCCGCATTTCATAATTTAAATCCTTGGATCAAGGATCCAACCGTGGATGCTACTCATTTCGAATTAAAAAGCGTTATGTTATAGATGCTTCTAACAGTTGGATAGTTTTCTGGGTTTCCCAACGAGGATCCACACAAACATTTGAAACTCTTTCTTCGAATTTGAAATTCTTTTAAGATTACTGGTGTATCTAGTGAGACGTTAAAGCTAAAATTATTTCCTTTTTCTCTACAGGGAAGCGCTGAAGCGTGGCTAGATTCATTCCCTCCAGACTCAATCACCACATGGGAGGAGTGGGCTCAAAAATTCCCGACAAAGTATTTTTCACCCAATAAAAATGCCCATTATGGAAGCGAGATTGTAACGTTCAAACAGGATACAAATGAAACAGTAGGAGCTGCGTGGGAGAGGTTCAAGAAGTTAGTAAGGAAATGTCCACATCACGTATTGCCTGCGTGCATCATGATTGAGAAATTATAATGGGTTAACCCAGGCCTCAAGAACCTTGGTTGATACCTCAGCTAGCGGATCACTCCTCAAGAAATTATACAATGAAGCTAATGATATCCTGGATATGATTGTAACCAACAACTGTCATTGGAGAGATGAAGATTTTGCACCCCTAAGGAAAACCGCATGAATCATGCAACTCAATGAAATCACAGAACTGAAGGCTCAAATGGCGACAATGAACAACTCATCTACTGAAATGAGAGTCCAGATGACCAGCATGAACAATATGCTCACAACTCTTACTTCGGGGAACCAGGCCCCTCTTGCTTTTGTTAATCAAATTACTTCACCGACTTGTGTATATTGTTGTGAGGAGCATTTATTTGATGACTGCCCTTATAATCCTACTTTTGCATGTTATATAGGTCAAGGACAAGGTAGTCAGAATAGGCCTAACAACCCTTATTATTCTAATACCTACAATCCAGGATGGAGGCAACATCCCTGTTGGGTTTTATGCCCTAAAACTCGTAGA

mRNA sequence

ATGGCGGCACCCGATAGTCGGAGGTCGACGGTAGCGCCTGGTAGTCAGAGATCAACAGTGGCGGTCCGTCAGCGGAGGTCGGCGGCGACCGATAATCAGAGGTCGACGGTAGCGGTTGGTCGCGACCAGGAGTCAGAGTTCTTGGATGACGAGGAGGTGAAGAGACCTGAGCGGAATGAAGCGGGCCTGAAGAATAGTGCCACGGAGTCAAAGGCCCCTCTTGCTTTTGTTAATCAAATTACTTCACCGACTTGTGTATATTGTTGTGAGGAGCATTTATTTGATGACTGCCCTTATAATCCTACTTTTGCATGTTATATAGGTCAAGGACAAGGTAGTCAGAATAGGCCTAACAACCCTTATTATTCTAATACCTACAATCCAGGATGGAGGCAACATCCCTGTTGGGTTTTATGCCCTAAAACTCGTAGA

Coding sequence (CDS)

ATGGCGGCACCCGATAGTCGGAGGTCGACGGTAGCGCCTGGTAGTCAGAGATCAACAGTGGCGGTCCGTCAGCGGAGGTCGGCGGCGACCGATAATCAGAGGTCGACGGTAGCGGTTGGTCGCGACCAGGAGTCAGAGTTCTTGGATGACGAGGAGGTGAAGAGACCTGAGCGGAATGAAGCGGGCCTGAAGAATAGTGCCACGGAGTCAAAGGCCCCTCTTGCTTTTGTTAATCAAATTACTTCACCGACTTGTGTATATTGTTGTGAGGAGCATTTATTTGATGACTGCCCTTATAATCCTACTTTTGCATGTTATATAGGTCAAGGACAAGGTAGTCAGAATAGGCCTAACAACCCTTATTATTCTAATACCTACAATCCAGGATGGAGGCAACATCCCTGTTGGGTTTTATGCCCTAAAACTCGTAGA

Protein sequence

MAAPDSRRSTVAPGSQRSTVAVRQRRSAATDNQRSTVAVGRDQESEFLDDEEVKRPERNEAGLKNSATESKAPLAFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYNPGWRQHPCWVLCPKTRR
Homology
[Close]
BLAST of Spg015764 vs. NCBI nr
Match: XP_022926214.1 (uncharacterized protein LOC111433394 [Cucurbita moschata])

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-11
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0 

Query: 71  KAP---LAFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYN 130
           KAP   +A +NQ  + +CVYC EEH FD CP NP    Y+G  Q SQ  P N  +SNTYN
Sbjct: 304 KAPVHTVAVINQTAAESCVYCGEEHTFDQCPSNPASIFYVG-NQASQGNPKNNPFSNTYN 363

Query: 131 PGWRQHP 135
           PGWR HP
Sbjct: 364 PGWRNHP 369

[Close]
BLAST of Spg015764 vs. NCBI nr
Match: XP_022929949.1 (uncharacterized protein LOC111436411 [Cucurbita moschata])

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-10
Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 0 

Query: 71  KAPL---AFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYN 130
           KAP+   A +NQ  + +CVYC EEH FD CP NP    Y+G      N  NNP +SNTYN
Sbjct: 333 KAPVHTAAAINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGNLKNNP-FSNTYN 392

Query: 131 PGWRQHP 135
           PGWR HP
Sbjct: 393 PGWRNHP 398

[Close]
BLAST of Spg015764 vs. NCBI nr
Match: XP_015387726.1 (uncharacterized protein LOC107177802 [Citrus sinensis] >XP_015387727.1 uncharacterized protein LOC107177803 [Citrus sinensis])

HSP 1 Score: 75.1 bits (183), Expect = 5.5e-10
Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 75  AFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPN--NPYYSNTYNPGWRQ 134
           A VNQI   +CVYC E HLFD+CP NPT   Y+    GS NR N  NP YSNTYNPGWRQ
Sbjct: 298 ATVNQIYDMSCVYCGEGHLFDNCPGNPTSVNYV----GSFNRQNQDNP-YSNTYNPGWRQ 354

[Close]
BLAST of Spg015764 vs. NCBI nr
Match: XP_024020121.1 (uncharacterized protein LOC112091245 [Morus notabilis])

HSP 1 Score: 74.7 bits (182), Expect = 7.2e-10
Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 79  QITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYNPGWRQHP 135
           Q  + +C YC E HLFD CP NP  ACY+    G+ NR NNP YSNTYNPGWRQHP
Sbjct: 260 QFIAVSCTYCGEGHLFDSCPSNPESACYM----GNFNRNNNP-YSNTYNPGWRQHP 310

[Close]
BLAST of Spg015764 vs. NCBI nr
Match: XP_024035568.1 (uncharacterized protein LOC112096370 [Citrus clementina])

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 75  AFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPN--NPYYSNTYNPGWRQ 134
           A VNQI   +CVYC E HLFD+CP NPT   Y+    GS N+ N  NP YSNTYNPGWRQ
Sbjct: 10  ATVNQILEISCVYCGEGHLFDNCPGNPTSVNYM----GSFNKQNHDNP-YSNTYNPGWRQ 66

[Close]
BLAST of Spg015764 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 0 

Query: 71  KAP---LAFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYN 130
           KAP   +A +NQ  + +CVYC EEH FD CP NP    Y+G  Q SQ  P N  +SNTYN
Sbjct: 304 KAPVHTVAVINQTAAESCVYCGEEHTFDQCPSNPASIFYVG-NQASQGNPKNNPFSNTYN 363

Query: 131 PGWRQHP 135
           PGWR HP
Sbjct: 364 PGWRNHP 369

[Close]
BLAST of Spg015764 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 9.2e-11
Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 0 

Query: 71  KAPL---AFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYN 130
           KAP+   A +NQ  + +CVYC EEH FD CP NP    Y+G      N  NNP +SNTYN
Sbjct: 333 KAPVHTAAAINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGNLKNNP-FSNTYN 392

Query: 131 PGWRQHP 135
           PGWR HP
Sbjct: 393 PGWRNHP 398

[Close]
BLAST of Spg015764 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08
Identity = 35/70 (50.00%), Postives = 40/70 (57.14%), Query Frame = 0 

Query: 68  TESKAP---LAFVNQITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSN 127
           T  KAP    A + Q  + +CVYC EEH FD CP NP    Y+       N+ NNP  SN
Sbjct: 292 TMIKAPAHTAAVMTQTATESCVYCGEEHTFDQCPRNPASILYVRNQASQGNQKNNP-SSN 351

Query: 128 TYNPGWRQHP 135
           TYNPGWR HP
Sbjct: 352 TYNPGWRNHP 360

[Close]
BLAST of Spg015764 vs. ExPASy TrEMBL
Match: A0A1U8JJE2 (uncharacterized protein LOC107907506 OS=Gossypium hirsutum OX=3635 GN=LOC107907506 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.3e-08
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 79  QITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYNPGWRQHP 135
           ++    CVYC E+H+FD+CP NP    Y+G    S N P    YSNTYNPGW+Q+P
Sbjct: 213 KVAELACVYCGEDHVFDECPSNPASVYYMGNFDRSNNNP----YSNTYNPGWKQYP 264

[Close]
BLAST of Spg015764 vs. ExPASy TrEMBL
Match: A0A6J1DYY9 (uncharacterized protein LOC111025557 OS=Momordica charantia OX=3673 GN=LOC111025557 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.3e-08
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0 

Query: 79  QITSPTCVYCCEEHLFDDCPYNPTFACYIGQGQGSQNRPNNPYYSNTYNPGWRQHP 135
           QI+  +CVYC + HL+++C  NP F  Y+GQG     R  NP YSNTYNPGWR HP
Sbjct: 229 QISDISCVYCVDNHLYENCHANPAFIFYVGQG---VQRNFNP-YSNTYNPGWRDHP 280

The following BLAST results are available for this feature:
BLAST of Spg015764 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022926214.13.8e-1155.22uncharacterized protein LOC111433394 [Cucurbita moschata][more]
XP_022929949.11.9e-1053.73uncharacterized protein LOC111436411 [Cucurbita moschata][more]
XP_015387726.15.5e-1064.52uncharacterized protein LOC107177802 [Citrus sinensis] >XP_015387727.1 uncharact... [more]
XP_024020121.17.2e-1062.50uncharacterized protein LOC112091245 [Morus notabilis][more]
XP_024035568.12.1e-0962.90uncharacterized protein LOC112096370 [Citrus clementina][more]
BLAST of Spg015764 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg015764 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EEI21.9e-1155.22uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... [more]
A0A6J1EQ909.2e-1153.73uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
A0A6J1H7E41.1e-0850.00uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A1U8JJE27.3e-0850.00uncharacterized protein LOC107907506 OS=Gossypium hirsutum OX=3635 GN=LOC1079075... [more]
A0A6J1DYY97.3e-0855.36uncharacterized protein LOC111025557 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Spg015764 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015764.1Spg015764.1mRNA