Spg015667 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015667
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 19114564 .. 19118356 (-)
RNA-Seq Expression	Spg015667
Synteny	Spg015667

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACACTTCTCAGCTAATTCTAATTCCGGAATAACTCATATTCCTATAGGCATTAGCCACCGTTATTTGGTCAAGGATTTGTTAACAACACTTAACTCATCCTTGTAAGTGTAACCCTCCCACTTTCAGATCCCAGAGGCACGCACCAACAGGCCACCGAAGGGAAAGACAACTGTTGGTAATTAGCCTAAGTGACCCTATCCTTTCCAGGAGTTCACGGTGTTACGAATCTTATGATCAGACCCTCTGAAGGGATGGTTGCTCCAGGACAACACGCAGGCGGATCATAAGACTCTCACGGTGTGACCTATGGGTGGAGACCGAGGGATACGTTGACACGTGTCCCGCTCCCACTTACTATGGGCACTTTCCCCATTCACCTTGTTATTGACTCATGCAAACACTTTCCGAAGGGAGGTCGCGCTAAAACGACACGAAGCCGAGCATGGATCTCACGTTGCAAATATAGGGACGTAGGAGCAAAAACTCGATTTAAATCAAGTTTTGATTTTACCTCCCACTAAAGTGACCTACCGTATATTTTAGGGTTTATTAACCTAGATAAATCCGGCTAATTCAATTTATCTAAGTCTAATCCTATTATAACTATTATAATGAGAATTGTAATGTTCTAGGTGAATTAAACTCTTTTAACAAACCTAGCAACACCGTATGCTAACATGACTATGGTCATTTCAACTCAGGTTCCGGGTTTGTTCCCAGGTAGCAGGTGTTCCGTAAACCGTCAGCTTAAATACCTCCAGCCTTAGACAGAACGTAACCGGGAGAGTTCCCTTTTAACCATAGTAATGTAAAGTCTTTACTCTAAAGATCTAGGTGTATTAAACTCTTTTAATAAACCTAGTGACATTGCATGCTAACATTTAACCATGATTAATTCAACTCCGGTATTCCGGGTCAGTTCCCAGGTAGGAGGTGTTCCGTAAACCGTCAACTTAAGTACCCCCAACCTTAGACAGAACTTTACCGGTAGAGTTCCCTTATAATCATAGTAATGTTTGTCCTACTTAGTAAGTTAAAACTATTTTTTAAAAAACTAAGCAAGACTTAATTCTAATCCTATTAGAATTAACGAGATCTTAGGTCTAATTAATTTTAAACATTTTAAAATTAATACATTTACCTATGATCCTATGTTTGCATGCAATTTTTATTATAGGTTGACGGTTTCTAATCATCAATTTTAAACTATTCAAAATTTTAATGATTAGCCCTATAATCATGCATACGATAGTTTTAAAATAATTAACAATCATATTCAAATTAATATAATAAAACTATATATATTGCCTTGCATTGCATGAAATTAATATAACAATTATATTAAACTATGGATGTTTCATGCCCAATGCAACTTTGATTTCCATTATTAATAAATTAACAATTAAAATATTACCAAAAATGGTAAATCAAAGTAGCATACTGCAAACAATTTTATTAAATATAATTATATATATTTAACTAGGTAATTGTATGCATCATGCTTATCATTTTTCATGATTTTAATATAACTCAACTATATATTAAAAACTCATGAAAATAAACCATGCATTTCAATCCATTCATTATAACTAATTATAATATATATAAAATGCATGAGCATGCTTTATAACCTAAGGTGGGATTTTAGATCTAAATGACATCCATAAAGCATTTAAATAGCGTATAAACCGATTAATTGGCCCCTAGGATAAAATAAAGCACATAAATTACAATAATTGAGCTATTTTATCCTATTACAGTCAACTGCAGCTCCGAACCGGACCAAAACCGCTCCAAACGTGCCAAAACCGTCCAAACCGGGTCAAAACCGCCAAAAAATGGGTCAAAACCGCTTGAACCAGCTGGAAAACCACTGCCCAGTCAACGAACCGGTCAATTCTCGCTTGAACCGGATGAACCGGTCAAAGACCAACGAACCGCGCCTCTAAAACCTCTGGACCGGACCGCTCCAGCGAACCACACGCGTGAAAAAAATGAGATCATATATGCACAAGTCACAACTCGAACCTGTGACCTCGACGAGACTAACCCAACGATCAAACCACCAAGCTGCATCCATGTTTTGAGTCTTGAATTACGCGGTTTGTATTTACCTTATATTTGTTTATTTAATAATTCGAATTTCTGCACTGTTCCAGCCGCTGTTCTTCGTCGTTTTCCGCCGTTTTTGGAAAAATTTGGTCCCGATCTTCATCGTTCTTCAATCTAAACTAGACCCGAACTTACAGAGACTCGATTTACATATTATGCCCAAAAAACGCAGGGGCCTTTACATTGAACCATTCAAGAAAACGTAAATCTATGGCCAAATTAATCGAAACCATTTATACGCAAACCATAACATTCATAATGCATAAATCCCACCAAGAACAAATTGCAAATTCCAATTTAAAATCAAGAACAACTGATTTGGCTCTGATACCAATTGAAGGGATAAAAGCCCCACGCAGCGGAAAGTATTACCAAACCTACTCAGAGTCTTAGATTCTAATTGAAATACCAATACAATTTGCAAAATATTACAGCAATAAATCTATATTTAATGGGCTGTACATAGGCTATAAACATGCTAAAGATCAACTAGATTGATCCTAGTGATCAAGGATTTCATAGAAAACTTACTTTTGTAGAAAGCCTTGATCAATTCCCCTTTTCTTGCCAATAAGATTGAAAATGCAGCAACCCTCTTGTGCGAACACCACCAATCGGCTACACCGGTATATCTCTAAGACTTCTTGAGGCAGGAGACTTGTGGGAGTCTTTTGGGAGAGATCTCTGAGAGAAGGAGAGACAATGAGATGCCTTTCACCCCACCCCAGGGGTCCTATATATAGGTAAAGGCCAAGACCTTTTCCTAATAGGAAAAGGTCTAGGAATAAGTTCAAATCTATTATCTGAACAATATCTAATTTTAATAATTAATTAATTCCATAATTAATTAATTACCCAATTAAATATCACATATTTAATCTTAGGGATTTTATTAAAATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTTTCCTAATAGGAAAAGGTCTCTAATTTTAATAATTAATTAATTCCATGATTAATTAATTACCCAATTAAATATCATATATTTAATCTTAGGGATTTTATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTCTCAAGAATTAATTTTTGAAATTAATTCAAAAATTATATTATAAAGTTTCATAAACTTTATATTATAATGCATCAATATACATTATACGATTCCCCAAATAAATTGAGCACTTTCAATTTACAATTTATATTTGTTTGCTTCTAGTCTTTTTACGAGCTACCAGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAACCAAGTTAGTCTCCATTCGTTAACTGTGGGTCATTCCACTAAAGACCCTCAGCTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAGTCCTTCACATGTGTTCGTATCCCAGTTGGGTCAAATTACCGTTTTACCCCTGGTTTACATCTTTGTCCTTAAGTCCCCAGTGCTCCTCTAATGAACAACCTGTTTGAGGTCCAACCAACAAACAGAAGTCCCTCTCGTGCCATAGAGAGGGTTGGGCCCATTGTTCAAGTCCCGGAGACACCACTTAAGGGAACACACCTCTACTTACCCTAG

mRNA sequence

ATGAGACACTTCTCAGCTAATTCTAATTCCGGAATAACTCATATTCCTATAGGCATTAGCCACCGTTATTTGGTCAAGGATTTGTTAACAACACTTAACTCATCCTTGTTCCGGGTTTGTTCCCAGGTTGACGTCAACTGCAGCTCCGAACCGGACCAAAACCGCTCCAAACGTGCCAAAACCGTCCAAACCGGGTCAAAACCGCCAAAAAATGGGTCAAAACCGCTTGAACCAGCTGGAAAACCACTGCCCAGTCAACGAACCGGTCAATTCTCGCTTGAACCGGATGAACCGGTCAAAGACCAACGAACCGCGCCTCTAAAACCTCTGGACCGGACCGCTCCAGCGAACCACACGCGTGAAAAAAATGAGATCATATATGCACAAGTCACAACTCGAACCTGTGACCTCGACGAGACTAACCCAACGATCAAACCACCAAGCTGCATCCATGTTTTGAGTCTTGAATTACGCGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAACCAAGTTAGTCTCCATTCGTTAACTGTGGGTCATTCCACTAAAGACCCTCAGCTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAATCCCCAGTGCTCCTCTAATGAACAACCTGTTTGAGGTCCAACCAACAAACAGAAGTCCCTCTCGTGCCATAGAGAGGGTTGGGCCCATTGTTCAAGTCCCGGAGACACCACTTAAGGGAACACACCTCTACTTACCCTAG

Coding sequence (CDS)

ATGAGACACTTCTCAGCTAATTCTAATTCCGGAATAACTCATATTCCTATAGGCATTAGCCACCGTTATTTGGTCAAGGATTTGTTAACAACACTTAACTCATCCTTGTTCCGGGTTTGTTCCCAGGTTGACGTCAACTGCAGCTCCGAACCGGACCAAAACCGCTCCAAACGTGCCAAAACCGTCCAAACCGGGTCAAAACCGCCAAAAAATGGGTCAAAACCGCTTGAACCAGCTGGAAAACCACTGCCCAGTCAACGAACCGGTCAATTCTCGCTTGAACCGGATGAACCGGTCAAAGACCAACGAACCGCGCCTCTAAAACCTCTGGACCGGACCGCTCCAGCGAACCACACGCGTGAAAAAAATGAGATCATATATGCACAAGTCACAACTCGAACCTGTGACCTCGACGAGACTAACCCAACGATCAAACCACCAAGCTGCATCCATGTTTTGAGTCTTGAATTACGCGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAACCAAGTTAGTCTCCATTCGTTAACTGTGGGTCATTCCACTAAAGACCCTCAGCTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAATCCCCAGTGCTCCTCTAATGAACAACCTGTTTGAGGTCCAACCAACAAACAGAAGTCCCTCTCGTGCCATAGAGAGGGTTGGGCCCATTGTTCAAGTCCCGGAGACACCACTTAAGGGAACACACCTCTACTTACCCTAG

Protein sequence

MRHFSANSNSGITHIPIGISHRYLVKDLLTTLNSSLFRVCSQVDVNCSSEPDQNRSKRAKTVQTGSKPPKNGSKPLEPAGKPLPSQRTGQFSLEPDEPVKDQRTAPLKPLDRTAPANHTREKNEIIYAQVTTRTCDLDETNPTIKPPSCIHVLSLELRVGPNGPTDQKLQRYETNRLKLINQVSLHSLTVGHSTKDPQLHSSHCRIFLCPRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTHLYLP

Homology

[Close]

BLAST of Spg015667 vs. ExPASy TrEMBL
Match: A0A5D3C4A5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00090 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-04
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 210 PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGT 259
           P I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ LKGT
Sbjct: 22  PEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLVQDLDSVLKGT 70

[Close]

BLAST of Spg015667 vs. ExPASy TrEMBL
Match: A0A5D3CZK8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00670 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-04
Identity = 25/49 (51.02%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 210 PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGT 259
           P+I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ +KGT
Sbjct: 103 PKITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLVQDLDSVIKGT 151

[Close]

BLAST of Spg015667 vs. ExPASy TrEMBL
Match: A0A5A7SHV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00110 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-04
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 210 PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGT 259
           P I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ LKGT
Sbjct: 22  PEITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLVQDLDSVLKGT 70

[Close]

BLAST of Spg015667 vs. ExPASy TrEMBL
Match: A0A5A7UI79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00740 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-04
Identity = 25/49 (51.02%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 210 PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGT 259
           P+I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ +KGT
Sbjct: 103 PKITSCSLRPTDPLLNNWFKVQPINQNPSRANEKVGPLVQDLDSVIKGT 151

[Close]

BLAST of Spg015667 vs. ExPASy TrEMBL
Match: A0A5D3D539 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00150 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.8e-04
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 210 PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTHLYL 263
           P I++ +  P+ PL+N+ F+VQPTN +PSRA E+VGP+VQ  ++ LKGT   L
Sbjct: 32  PEITSCSLRPTDPLLNSWFKVQPTNLNPSRANEKVGPLVQDFDSVLKGTSYLL 84

The following BLAST results are available for this feature:

BLAST of Spg015667 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015667 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4A5	5.2e-04	53.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CZK8	5.2e-04	51.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SHV1	5.2e-04	53.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UI79	5.2e-04	51.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D539	6.8e-04	50.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg015667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015667.1	Spg015667.1	mRNA