Spg015625 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015625
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Locationscaffold10: 17078093 .. 17082592 (-)
RNA-Seq ExpressionSpg015625
SyntenySpg015625
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACAAAAGCAGAAGAGAAAGACAAAAGGTTTAAGAAAACCAAAACTAGTTGTCGTAGAGAATCAGGATTTTGTTCTATCTCGACATCCAGTAACCCTTAAAGATTTCTTCCCAAAGAACCTTCTTAATGACGATCATAAGGATATCCCTGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGGTGATGACAAGGCCAGAAGATTCGCCTTCATTCACAATAGATGATTTGTTGTCACTTCCTCAAGCAACCAAAGATGCTATTGTTGAAACATTGAAAAGTTCTAATGTTTCAGACGTTCCAGACTTGCAAGAACAAAAATGTGCCTCATGTTATATGTCCATTAGCTTCATAGATGAAGACTTGATGTTGGGATCGAAGCCTCATAATAGGCCCTAATTCGTCTCAGGATATATTCGAGAGCAAAAAGTTGGCCAAATTCTTATCGATGATGGATCTGCGGTGAATATAATGCCTAAGTCAACCATGACACAGATAGGGATTTCAATGGATGAACTATCAAACAGTAGGTTGGTTATTCAAGGCTTCAACCAAGGCGGCCAACGAGCAATCGACATGATTCGTTTGGAGCTTGTTATTGGAGATTTGAAGGCCAACACTTTATTCCATATCATAGATTCCAAGACCACTTACAAGTTATTGTTAGGTCGTCCTTGGATTCATGGAAATGGAGTAATATCTTCTACACTTCATCAATGTTTCAAGTTCTATCAAGACGGTGTCAAGAAAGTTGAAGCCGGCACTAATCCATTCTCAGAGGTAGAATCCCACTTTGCAGATGCAAAGTTTTATATGTAGAATGATAAAGCAGGGTAGATCATACCAGTTGAGATTCCTCTGATTGAAAGTCACAAAGTAGAGCATCCAAAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGCAAAATCAAAAGCTCCAAAAGAGGCGTCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAGGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTAACAACAATTACCAGGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAATGATTTTGCCGGAAAGACGAACGAAGGATGGATTTGACCCAAATGCATACAAACTCTTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAAAAATCTTCGATGGGAGATCTAAGCTTTCTCCGACACAGAAGAAGCTCGAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGAATAGGGTACAATCCCCTAGAGCCAGTTCGTATAATCAGAAAATGGAAAGTTGCAGAGGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGTCTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGAAACAAATTAATCGATCTCAATAAAGTGTTATTTGAGTGATTCAGTAATTTAGTTATTGAATAATCAAGTTTGCATTAATAAACCCAAAATCCAATAAACTAAGATCCAAGGTTGTTTAAATGAAACTTGAACTAGTATGTGGGGACATACGGGGATCGGTATTCAAGTAACAACCTAAAAGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCATGGTGACACTATGTAATACGACCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCAGGTGGGGGTATTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGAAACAAATTAATCGATCTCTATAAGTCGTTATATGAGTGATTCAGTAATTTGGTTATTGAATAAATCGAGTTTGCATTAATAAACCCTAAATCCAATAAACTAAGATCCAAGGTTGTTTAAATGAAACTTGGACTAGTATGTAGGGACATACGGGGATCAGTGTCCAAGTAACAACCTAAATGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTATCCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGGGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTAGATGTAACGCCGTTAACTAGTTTAGGTTTCTATTTCAATAGGATGACCTAGGTAACTCAATCTCAATCCTGAGTCTGTTATGAACTCCTTTTCAGGAGGGATTGTCCTTAGATTTGTATGGGTGAGAGTGGCCAGTTCGCCGACTCAATATTCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGGCAAGTAGATGTGTGTTCCCTTAAGGACTGATTCCGGGGCTTGAACAAAAGCGCGCTGTCCTCTCCTGGCCCGAGGGGAATTTCTGTTTAGTGGTTGGACCCTAAACAGGTTGTTCATTAGAGGGATCAGTGGTACTTAAGGATCTAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGTATTGGTCGATATCCGTGGACACAGAAATATTCTACAGTGAGAAGAGTGCAGTTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGTTGATTAACTTGGTTAATGAGTTTAGCCAGTTAATCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCACCTGCTAGCTCGTAACGGGTATTGAGATTAATTAGTCTTGAATGTTAAAGGGAATTTTAGTTAATTGTATTTGATACAATTAATATAATGTATGGAGATACATTATGGTATAAGTTTAATTAGTGAATTAAACTTTATAATAAAATTAATTTTGGATGTGATTCAAAATTAATTAATGAGAGAATTATATATTTGAAAGAGTTCAAATATTAAATATGAATTAGATTCATATTGAACTATAGGTTAAAATTAATATGAATAGTGATTCATATTAAAACTATAGTATAAGAGAGAAAATGAAATTAATTATATATGTGATATTTAATTAATTTATGAATTAATTAATTTAATTCAATTTGGTTAAATATGATTTAATCGAAATTAAAACTATAGCTTATAATTAATGTACATTTGATGCACATTAAAACTATAGGTTAAAAGAGAGAGATGCAATTAATTTAATATATGATATTCAATTAATAAATTTGCCTAGTTAGTACAATTAAATATGATTTAGTTGGATTAAATAAAGAAACTATATGTTGAATTTAATTTAATTGAAATGGTTTTGATTAAATAAATTCAATTTTATATTATATAGTTTTTTTTTATATTAATTTAATATTATTATTATTAAATTAATAACTCCCCAGCAGTTATGCTGAGGAGTGGGTATGTGGCAGATGAGGGAGTTACACATCGTAACTCCCAACGTGCAGCACGATGAAAAACACTTCTCTCTGGATCTCTCTGCAGGATTAGAAAAAAAAGTTTCTACTCTCTCAAAAATTCCGGTTCTCTCACACACAAGAACACAACATCATTCTTGCTGTTGTTCTTCTTCATAAAATTCCCTTCAAGACCGAGTTCCCACAAGCTCTATCTCAAGAACCCAAGAGGATAGCAGGTGTTCACTTGTGGTAGTGTCATTTGGAAGCTTACTGTACGCAAAAATTCAAGAGGAGCATTGTGTTGTTCTTCGGCTATACATGTAAGTCCTCAGTTCTAAATAGTTTAGAATCATTAATGCATGCTTAATCGATAGAATTTGTAGAATTAGTTCTTAAATTCTTGTTGCCCAATGTATCGGTGCTTTCTGTAAAACCAAATTAAGAACGTAAGGTCTGATATACGCTTCCGCTGCGAGGATTTTCATTCTTTCAATTGGTATCAGAGCCCAATCGTTGCTTTAATTTTGTTTCTACGAAACTTGCATTGGGTTTTGGTGGGTAATTTTGCATTGTGAATGTAGAATTTTGCTAATAGGCTGTTTAGGTATTTTTGGCCCTAGATTTGCAATTTCAATGATTTGATCATGTAAAGGCCTATGTTTTTTGGGCAAAAGTTGTAAATCGAGTCATGTAAGTCCGTGTCTAGTGAAATAGGATTTCAATTTGATGAAATATGCTCGAATCGGAGTAAAAAATGGCGATTTACGGCTGCTAGAAACGAAGAAAACCCAGAAAACAGAGCAGAAAACAGAGGAATCGGAGAATTGGAGTTTTCTGGAAATTTTCCCGGCCAGGATCCCGACCAGGATCGAGACCGGGAAATTCCCGACCGGGATCGGGACCGGGAACCAAGGCAAATTAACGAAGACGCGCAAAAATAA

mRNA sequence

ATGTCACAAAAGCAGAAGAGAAAGACAAAAGGTTTAAGAAAACCAAAACTAGTTGTCGTAGAGAATCAGGATTTTGTTCTATCTCGACATCCAGTAACCCTTAAAGATTTCTTCCCAAAGAACCTTCTTAATGACGATCATAAGGATATCCCTGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGCAAAATCAAAAGCTCCAAAAGAGGCGTCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAGGAAGAAGCTCGAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGAATAGGGTACAATCCCCTAGAGCCAGTTCGTATAATCAGAAAATGGAAAGTTGCAGAGGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGTCTTGGGTTTTATGCCCTAAAACTCGTAGATAACCGAGTTCCCACAAGCTCTATCTCAAGAACCCAAGAGGATAGCAGGTGTTCACTTGTGGTAGTGTCATTTGGAAGCTTACTGTACGCAAAAATTCAAGAGGAGCATTGTGTTGTTCTTCGGCTATACATTGAAATAGGATTTCAATTTGATGAAATATGCTCGAATCGGAGTAAAAAATGGCGATTTACGGCTGCTAGAAACGAAGAAAACCCAGAAAACAGAGCAGAAAACAGAGGAATCGGAGAATTGGAGTTTTCTGGAAATTTTCCCGGCCAGGATCCCGACCAGGATCGAGACCGGGAAATTCCCGACCGGGATCGGGACCGGGAACCAAGGCAAATTAACGAAGACGCGCAAAAATAA

Coding sequence (CDS)

ATGTCACAAAAGCAGAAGAGAAAGACAAAAGGTTTAAGAAAACCAAAACTAGTTGTCGTAGAGAATCAGGATTTTGTTCTATCTCGACATCCAGTAACCCTTAAAGATTTCTTCCCAAAGAACCTTCTTAATGACGATCATAAGGATATCCCTGAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCATCCGCTCACCCTGCAAAATCAAAAGCTCCAAAAGAGGCGTCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAGGAAGAAGCTCGAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGAATAGGGTACAATCCCCTAGAGCCAGTTCGTATAATCAGAAAATGGAAAGTTGCAGAGGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGTCTTGGGTTTTATGCCCTAAAACTCGTAGATAACCGAGTTCCCACAAGCTCTATCTCAAGAACCCAAGAGGATAGCAGGTGTTCACTTGTGGTAGTGTCATTTGGAAGCTTACTGTACGCAAAAATTCAAGAGGAGCATTGTGTTGTTCTTCGGCTATACATTGAAATAGGATTTCAATTTGATGAAATATGCTCGAATCGGAGTAAAAAATGGCGATTTACGGCTGCTAGAAACGAAGAAAACCCAGAAAACAGAGCAGAAAACAGAGGAATCGGAGAATTGGAGTTTTCTGGAAATTTTCCCGGCCAGGATCCCGACCAGGATCGAGACCGGGAAATTCCCGACCGGGATCGGGACCGGGAACCAAGGCAAATTAACGAAGACGCGCAAAAATAA

Protein sequence

MSQKQKRKTKGLRKPKLVVVENQDFVLSRHPVTLKDFFPKNLLNDDHKDIPEIVACHAVNAFEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSKAPKEASSNVPILRYVPLSRRKKGESPFTECSGILRKKLEKEGYAIPSSRAGIGYNPLEPVRIIRKWKVAEAHHITIEEMSDPEDKKNDDSLGFYALKLVDNRVPTSSISRTQEDSRCSLVVVSFGSLLYAKIQEEHCVVLRLYIEIGFQFDEICSNRSKKWRFTAARNEENPENRAENRGIGELEFSGNFPGQDPDQDRDREIPDRDRDREPRQINEDAQK
Homology
[Close]
BLAST of Spg015625 vs. NCBI nr
Match: KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-10
Identity = 60/162 (37.04%), Postives = 77/162 (47.53%), Query Frame = 0 

Query: 75  AKKESIEEVDACEVQSKEASAHPAKSK-APKEASSNVPILRYVPLSRRKKGESPFTEC-S 134
           A KE  + +        EAS + AKS     E +SN PILRYVPLSRRKKGESPF E   
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247

Query: 135 GILR------------------------------------------KKLEKEGYAIPSSR 191
           G+ R                                          KKL +EG+ IP SR
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307

[Close]
BLAST of Spg015625 vs. NCBI nr
Match: KAA0043405.1 (hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 2.5e-10
Identity = 53/129 (41.09%), Postives = 72/129 (55.81%), Query Frame = 0 

Query: 75  AKKESIEEVDACEVQSKEASAHPAKSK-APKEASSNVPILRYVPLSRRKKGESPFTECS- 134
           A KE  + +     +  EAS    KS     E +SN  ILRYVPLSRR+KGESPF +   
Sbjct: 56  ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115

Query: 135 ------------GILRKKLEKEGYAIPSSRAGIGYNPLEPVRII--RKWKVAEAHHITIE 188
                        +++KKL +EG+ IP SR G GY   EP+ II  RK KV +++HIT+ 
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175

[Close]
BLAST of Spg015625 vs. NCBI nr
Match: TYK02262.1 (uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 5.6e-10
Identity = 62/204 (30.39%), Postives = 78/204 (38.24%), Query Frame = 0 

Query: 108 SNVPILRYVPLSRRKKGESPFTECS----------------------------------- 167
           SN P+LRY+PLSRRKKGESPF ECS                                   
Sbjct: 302 SNPPVLRYIPLSRRKKGESPFAECSKNPTVKNTEILKENFTPPLTKIEKGEAKKIEKKEL 361

Query: 168 ----------------------------------------------GILRKKLEKEGYAI 220
                                                            +KKL+K+GY+I
Sbjct: 362 EAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQKQGYSI 421

[Close]
BLAST of Spg015625 vs. NCBI nr
Match: KAA0053731.1 (uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-10
Identity = 71/236 (30.08%), Postives = 89/236 (37.71%), Query Frame = 0 

Query: 84   DACEVQSKEASAHPAKSKAP--------KEASSNVPILRYVPLSRRKKGESPFTECSGIL 143
            DA   Q    S    K +AP        ++  SN P+LRY+PLSRRKKGESPF ECS  L
Sbjct: 780  DALNSQQNGESTTETKLRAPEAEKIATLRKEVSNFPVLRYIPLSRRKKGESPFAECSKNL 839

Query: 144  ------------------------------------------------------------ 203
                                                                        
Sbjct: 840  TVKNTEILKENFIAPLTKIEKGEAKKIEKKDLEAYLPERRTVEGFNPKAYKLMAKAGYDF 899

Query: 204  ---------------------RKKLEKEGYAIPSSRAGIGYNPLEPVRII--RKWKVAEA 220
                                 + KL+K+GY+IP+SRAGIGY   EPVRI    K KVA  
Sbjct: 900  TTRTELKSVKIFDERPELSPTQTKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKTKVANT 959

[Close]
BLAST of Spg015625 vs. NCBI nr
Match: TYK28162.1 (uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 9.5e-10
Identity = 59/172 (34.30%), Postives = 77/172 (44.77%), Query Frame = 0 

Query: 75  AKKESIEEVDACEVQSKEASAHPAKSK-APKEASSNVPILRYVPLSRRKKGESPFTECSG 134
           A KE  + +        EAS + AKS     E +SN PILRYVPLSRRKKGESPF E   
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211

Query: 135 ILR-----------------------------------------------------KKLE 191
            L+                                                     KKL 
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271

[Close]
BLAST of Spg015625 vs. ExPASy TrEMBL
Match: A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.4e-11
Identity = 60/162 (37.04%), Postives = 77/162 (47.53%), Query Frame = 0 

Query: 75  AKKESIEEVDACEVQSKEASAHPAKSK-APKEASSNVPILRYVPLSRRKKGESPFTEC-S 134
           A KE  + +        EAS + AKS     E +SN PILRYVPLSRRKKGESPF E   
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247

Query: 135 GILR------------------------------------------KKLEKEGYAIPSSR 191
           G+ R                                          KKL +EG+ IP SR
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307

[Close]
BLAST of Spg015625 vs. ExPASy TrEMBL
Match: A0A5A7TPR5 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00040 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-10
Identity = 53/129 (41.09%), Postives = 72/129 (55.81%), Query Frame = 0 

Query: 75  AKKESIEEVDACEVQSKEASAHPAKSK-APKEASSNVPILRYVPLSRRKKGESPFTECS- 134
           A KE  + +     +  EAS    KS     E +SN  ILRYVPLSRR+KGESPF +   
Sbjct: 56  ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115

Query: 135 ------------GILRKKLEKEGYAIPSSRAGIGYNPLEPVRII--RKWKVAEAHHITIE 188
                        +++KKL +EG+ IP SR G GY   EP+ II  RK KV +++HIT+ 
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175

[Close]
BLAST of Spg015625 vs. ExPASy TrEMBL
Match: A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-10
Identity = 59/172 (34.30%), Postives = 77/172 (44.77%), Query Frame = 0 

Query: 75  AKKESIEEVDACEVQSKEASAHPAKSK-APKEASSNVPILRYVPLSRRKKGESPFTECSG 134
           A KE  + +        EAS + AKS     E +SN PILRYVPLSRRKKGESPF E   
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211

Query: 135 ILR-----------------------------------------------------KKLE 191
            L+                                                     KKL 
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271

[Close]
BLAST of Spg015625 vs. ExPASy TrEMBL
Match: A0A5D3C5A6 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001350 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.0e-10
Identity = 84/310 (27.10%), Postives = 118/310 (38.06%), Query Frame = 0 

Query: 10  KGLRKPKLVVVENQDFVLSRHPVTLKDFFPKNLLNDDHKDIPEIVACHAVNAFEEGDSSS 69
           +G+RK   V  +++ F  +        F+ K+      +D+ EI++   +    +G   +
Sbjct: 571 QGIRK---VDADSRPFTKAESHFADAKFYTKS------EDVSEIISTEVL--VTKGTFKN 630

Query: 70  SPSQNAKKESIEEVDACEVQSKEASAHPAKSKAP--------KEASSNVPILRYVPLSRR 129
                  K+S  + DA   Q    S    K +AP        ++  SN P+LRY+PLSRR
Sbjct: 631 EKEMITSKKS-NKGDALNSQQNGESTTETKLRAPEAEKIATLQKKVSNPPVLRYIPLSRR 690

Query: 130 KKGESPFTECSGIL---------------------------------------------- 189
           KKGESPF ECS  L                                              
Sbjct: 691 KKGESPFAECSKNLTVKNTEILKENFTAPLTKIEKGEAKKIKKKNLEAYLLERRTVEGFD 750

Query: 190 -----------------------------------RKKLEKEGYAIPSSRAGIGYNPLEP 220
                                              +KKL+K+GY+IP+SR  IGY   EP
Sbjct: 751 PKAYKLMAKTGYDFTNRTELKSVKIFDERPELSPTQKKLQKQGYSIPNSRVEIGYQSFEP 810

[Close]
BLAST of Spg015625 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 74/269 (27.51%), Postives = 105/269 (39.03%), Query Frame = 0 

Query: 48   KDIPEIVACH---AVNAFEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSKAP- 107
            +D+ EI++         F+      +  +++K +++      E+ ++     P   K   
Sbjct: 883  EDVSEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNGELTTETKLRAPEAEKIAT 942

Query: 108  -KEASSNVPILRYVPLSRRKKGESPFTECSGIL--------------------------- 167
             ++  SN P+LRY+PLSRRKKGESPFTECS  L                           
Sbjct: 943  LQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKI 1002

Query: 168  ------------------------------------------------------RKKLEK 220
                                                                  +KKL+K
Sbjct: 1003 EKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQK 1062

The following BLAST results are available for this feature:
BLAST of Spg015625 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0055957.11.1e-1037.04uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa][more]
KAA0043405.12.5e-1041.09hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa][more]
TYK02262.15.6e-1030.39uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa][more]
KAA0053731.17.2e-1030.08uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa][more]
TYK28162.19.5e-1034.30uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa][more]
BLAST of Spg015625 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg015625 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UMY25.4e-1137.04Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7TPR51.2e-1041.09RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DXC74.6e-1034.30Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3C5A66.0e-1027.10RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TZU91.3e-0927.51Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]
BLAST of Spg015625 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015625.1Spg015625.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process