Spg015620 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015620
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Eukaryotic translation initiation factor 3 subunit I
Location	scaffold10: 16875384 .. 16881227 (+)
RNA-Seq Expression	Spg015620
Synteny	Spg015620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAACACGCCGAAATCATCCTCATCTCGCAAGATTACTCGATCTCAGAGTAATCAACGTGCACAAAGTGCTGAACCAAGTGCTCGACGTAAAGAAGAGCAACCCGAAGCTACGATGCACGGAACGAGAGGAGTGAGACCCACGGGTTTCTCGTCAGCGGTTGTGGACCAAAGAACCAGCGTCCAAACTCCTTCTTCCTCAACAATGCCGGCCACTTCGAGGGAGAATCCGAGTACTTCTCGTCCATGAAGGTCCACACAAACTGATTCCCTCCACAAAACCCAAAAACCCGCGGGCCAACAGCTGAGGAAACGCTCGAGGGGATGGTTTGCGATGATTAGAGAGATGGGAGCCCAAAGGCGTGTGTCTCTTGAAGAAGAAGCCAGATTACGTGATGCTGAAGTAGCTGCAAAAATCAGAGAAAGCTCTCGGCAAGGAGAGACTCCAACGGGTAAGGTTTCTAACCCTTCTACTAACCCATCATCTTCTTGCAGGGATAGGCCCTTCGTGACTTACAGTGCAAGATAGAAGGATTCAAAGAAGGCTGCACTCGAAAAGCCCATAATTTTCGGTGCATTCTAGCCCCTTAAAGTGGCTCGAAAACCCTCATTATTGTTGGAGGTTATAGGACTGAGCAAGATGCACTAAGGGAGATTCGGGTTGAAAAAGAGAGGGAAAATCAGAGCATGAGGGAAGAAGATGAGTGTAACGCCCCAGGATTTTAAAACTAATCCTAGCACATTACTAACTCCTAAACCAAACTTAACCGAATGCACCGAAAATTTCGGCAGCATAACTGCATACATAGGACTAAACCAAAATTTTTATAACACCTGTTAAACATAAAATCACACTTCTATATAACAATCAACCCATATCTTCAGATTCTCAACACACAGATTCATGACAGAACTTCAACCTCCAATTTTACAACTACAATACGAGCCAGATCTCGCATCCACAACCGACGTCAGATACACAACTTACTAGGTAAAAGCATGCAACTCAATTGCTATAACAACTTAACTTTATTAAAAATAAGGGTTCGAACTTCAAATAAAACTACTCAAAAGCTAAACCTAACTTCTCGAAATAAAACAACTAAACAAGCCCTTGAATGAAGAAACATAACACTATCCTATACAACCAGAAGAGTAAAATAACTTTATAACATAATCTAGATAACAAAAACGTCTAGGCCGGTGGAGTCACTCCTCGTGTGCCTCCTCGTCTGCATCACCAGGCTCATAACACCCATCAACACCTGCATAATCTAAAAATGTTGGGGGGAGAAAGGGGAGGGGGTCAGTACAACCACGGTACTGGTAAGCAGCTCACACCCGGTGATCCATCAAGCAACAAACAACAAAATCAACATGCTAGGCACACGCATAAAACATACTCTTAAGCAAAAAACACATAATCATGCTTCTTAAAACGAGAACTCAACAACAAGACTCATGCTGACTCAACAGGATGCATTCATGCATACACACAACATGCTATGCAACCCCACATGGTTTCCGCGCCATGCTCGCTTTCTTAGCACATGATTTACGCGTCATGCCAAGCACCAAAACACATGAATTTTGGGCCATGCAACGCAACTTAACATGTGATTTTCGCGTCACGCTCAGCACCAAAACATGATTTCCGCGTCATGTAACGCACTTACACCCAGCACATGAATTATGCGCCATGCGCAGCGCACACTCACACGTGATTTACGCGTCACGTTCCGCACCAATAATATGATTTTAGCGTCATGTAGCACACTCTTAACACGTGATTTCCGCGTCACGCTCTGCACACACACCCAGCTCACCTCTCTATGAGCACACATGACTATGCAACTTGACTCTCATGCAACATAGCCAAAATCAATAAAACAACATGCTTAACAAGAATCAACAGTTCGTCATGCTTGCCAACATAACAAGTCAACACGCTTCAGTCTCATCAAAACATATATTTAAAGCAAGTAAACAAGCATCATATATCATGCAGTCAAACAGACTCACACGAGTAGAAACTACTTACCAAAAGTACTTCTAAAGCAACTTCAACAACCCAAGGTAGTCCAAGAAAGCTCCTAAATAACCAAGACAACCTCTACTAAATTAGAACCAACTTACAGATACTTTAAACATACTAGAAAGGCCTAAATCAACTGAGGAAAGTCTATTTCCTTGCTGGACAGCCACTCAAAATTCCCCAAAATAAAAACCCAAAACCTTTAGACCATGGGCAACCATGTCTAAGGCACAACGGGCAATGGGTATTCACCGAATGGCTATAATCAAGGCTTTTCAGCCGTTGGACAGCAAGTAAATAACACGTAAATAGCATTCTAAGGACTCCTAGCGATTGGGCAATTCTTCTAAGGCGTAGATAATAAATAGGTATCAATTAGCATGCTTTTTAAACCATAACCAGCAAGCAAAACCCATTTATTTTACATTTTAAGGACCTATAAAGGTTGGGCAACGCTTTAAAAGCCTAAACAACTAATGGGTATCGATTAAAACATGATTTTAAGGCTTTAATCTCTAATGGGTATCAAACACTTAAGCTATAAAACTAAAAACAGCATTGAACCTTACCCAATGGACCCGATTCCACGCAAGACGGGTTATATTAACCTCGAACAACGCACTAGAACGACCCTTGGGCAGTGGGTATTCAAGTTTATAGTGATTCGAACTCAATCAATCACTTAGACGGCGCTGCAGAATAGAAAATCCAATTCCAACTTAAATTTCCAGCACATAAACAAGTGGGTATTCTAATTTAAGCTCTAACCAAGAATGGGTAAGGCTTAAACTTACCGAACAGAGCGATTCTAGGCCAAATTAACCGCTGGACAGAGACGAATCTGACTGAACAAGGCGAAGGGAGATTAGATCGAGCCTAAAATCAACTAGAACAAGGGAAGAGAGGCTTACCTAAAGAATTTACCTCGCTAATCAACACACGAAAGGGAGATCAGAATAGCGACAAAACCCACCGAAACGAGCCTAAAATCGCAGATCAGAATAGCAGCTCGGATTGGCGAAGAAGCGGCGGCGGCGACACACCTGCTGCAGCGGTGGCAGCGCGTTTAGGCAGCGGTGGCTGGCTTCACAGCAAGGGGAAGAAACCGAGAGGGGGAAGGAGAGAACCACAAGAGAGATCTGCAAAGAAGATGAAGAAAAAGACCCGCGCGAGAGAGAGAGACCTGTGAAGAACACCCAATCGGCGGCGGCGCGACTCAGACGGCGGCAGCTGGAACTCCGGCGATTCGTGGGTGTTGGCCGGCAAGAAGCAAAAACGCAGGGGGGGCTCTTTTGTGAAGGTGAAGAGGAAAGAGAGAGGAAGAGATGAATTAAGGCTTGATTTTCTATTTCCTTTTCTTTTCTTTAAAATAAACTTTAAGAAAGGAAAACCCATTTTAAAAAAGAATTAGATTTTATCTAGGATTTCAATTGAAATCCCCAATTTGAATTTTAAACCCAATCTTAGCTCCTAAAGAATTTGGGATTTAAAACCAATTAAGAGAAGTTTGGGTCTTTTGATATTTAAAATAAATATCGAATATTAAACCTCTAAACTTTAGGAAATTAAAGATTTAATTAAAAACCTCTTTTCCCTAAATTATAGAAATTTAATTTAACGACCCAAGGCTAAGCTTAAATTCTAATTATCCAAATTAGAATAATAACGCTCAACAATTCTCCAAATTCTAACCCATCATCTTCTTGCAGGGATAGGCCCTTCGTGACTTACAGTGCAAGAAAGAAGGATTCAAAGAAGGCTGCACCCGAAAAGCCCATGATTGTTGAGCCCTTTAAAGTGGCTAGAATGCCACTGGATATTTTCGAAGAGATGATCCGACAAGTCGTGGCACAAACCCTCATTATTGTTGAAGGTTATAGGACTGAGCAAGATGCACTAAGGGAGATTCGGGTTGAAAAAGAGAGGGAAAATCAGAGCATGAGGGAAGAATATGAGTTTGCAAGAAAAAGGGATTTAGAAGAAGAAAGTGAAGCTAAGAAAAAGAAGGAAGAAGAAAAGCAAGATGCCGAGAGGGCTATACAAGCTGAAAAAGAGAGAAAACAAGATGAAGAACTTAGGAGAGTAGCTGCTGAACTTCACATCCTCGAGCAAGAAAAAGAAAGAAGAGAAAATTTGAGAGAAGAATAAGCTAGAAGAAAAGAGGCTGAAGATTTCCTTGCAGCCTTTGAGCCACTGCACAAGGCTCAAAGTGAGGTGGAACAGTTGCAGGAAGTTGAAGGAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGTCAGAAAAAGAAAAATATGAAGAAAATGAAGGCCAGAATGCGACCGCATTTGGGTCGCATTCTAAAGAAGGCCAAGAAAAGGCCACTCAAGAAGACCAAGCTGACGAGGCCCTTGACCCACTGTTTGAGTATGACATTAGGGGACCTCCACCAACTGCTGATAGTACCTCTTCGGGAGAGAAGAAAGAAGAAGAGGAAATTGAAAAAGAAGAGGCCGAGACCTCCAGTGATTCAGAAACTGAGTCAGATTCTGAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTACAGCTTTGAGGAAGAGAAGAAGAAGAGAACTTAGGGCCGAGAGGAGGACCAAGAACAAAAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTTCTGCAGTTCCTCCTACCTCCACACCTGTCCAACCGAAAGCCAAATCACCTAAAGCTCCAAAGAATCTGTTTCCTGAAGTCTTCAGGGATGTCAATTTCCAGGAGAAGGATGAGATCATGAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAGAGCAGGGACCTTGCCAGACTTTGTAACTAAAGTCATTACCCAGTACAAGTGGTAGGAGTTCTGTGCTCACCCTCAGGAGGCCGTGGTGCCTTTAGTTCGAGAATTCTATGCTGGACTGAGGGAAGAGAGCATGAGCATAGCAGTGGTGAGAGGTAAAATGGTCAGTTTCTCTTCTATTGACATTAACAGGGTGTACAGGATCCCAAACAAGGGAGTTCAATGGAAGGAGTCCCAAACAAAAGTGAAGACATTAGTGCCAAGCTATCTCAAGCTTGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGATTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGCTCCTCTACAACATCGTGAAAGGGTTGGAGATAAACATTGGGAGCATCATCAGTGAGGAGATTCTTTCTTGTGGAAGGAAGAAAGCAGGGAAGCTGTTCTTTGGGTCACTGATCACCCAGCTATGTTAGAAGGTAAAGATAGTTCCTGGGAAAGATGAGGAACGTCACTTTTTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAGCAGAACAACGCCCAGAGAAAAGACAAAGCTTCCACTTCCCAAGCTACTCCACCACCAGGGTTGACACCTGTTTCACCTTCTCAACAGCATATTCCAATCTTAGGGCCTACACCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGTTGGACCGGATTGAAGATAAGTTGAAGGCTTACTGGGTCTATGCCAAAGAGAGAGATGAAGTTGTTAGAGAGTTTTACCTCTCTATCGCCCCCAGCATCGCCCCCGTGTCTCCTGACTTCCCTCAATCGCTGCTGCCTCAAGAAGAGAAAGAATCTGATGATGAAGATGAAGATGAAAGAGAGAGTTCCTTAGATGAGGACTATGGGAGTTTTCTGATCCCCTTTTATCTTCTATTTTGTGAATATTTTGCATAA

mRNA sequence

ATGAAAAACACGCCGAAATCATCCTCATCTCGCAAGATTACTCGATCTCAGAGTAATCAACGTGCACAAAGTGCTGAACCAAGTGCTCGACGTAAAGAAGAGCAACCCGAAGCTACGATGCACGGAACGAGAGGAGTGAGACCCACGGGTTTCTCGTCAGCGGTTGTGGACCAAAGAACCAGCGTCCAAACTCCTTCTTCCTCAACAATGCCGGCCACTTCGAGGGAGAATCCGAAGATGGGAGCCCAAAGGCGTGTGTCTCTTGAAGAAGAAGCCAGATTACGTGATGCTGAAGTAGCTGCAAAAATCAGAGAAAGCTCTCGGCAAGGAGAGACTCCAACGGGTAAGGCCGGTGGAGTCACTCCTCGTGTGCCTCCTCGTCTGCATCACCAGGCTCATAACACCCATCAACACCTGCATAATCTAAAAATGTTGGGGGGAGAAAGGGGAGGGGGTCAGTACAACCACGGTACTGGTAAGCAGCTCACACCCGCCGTTGGACAGCAAGGAGATCAGAATAGCGACAAAACCCACCGAAACGAGCCTAAAATCGCAGATCAGAATAGCAGCTCGGATTGGCGAAGAAGCGGCGGCGGCGACACACCTGCTGCAGCGGTGGCAGCGCGTTTAGGCAGCGGTGGCTGGCTTCACAGCAAGGGGAAGAAACCGAGAGGGGGAAGGAGAGAACCACAAGAGAGATCTGCAAAGAAGATGAAGAAAAAGACCCGCGCGAGAGAGAGAGACCTGGATAGGCCCTTCGTGACTTACAGTGCAAGAAAGAAGGATTCAAAGAAGGCTGCACCCGAAAAGCCCATGATTGTTGAGCCCTTTAAAGTGGCTAGAATGCCACTGGATATTTTCGAAGAGATGATCCGACAAGTCGTGGCACAAACCCTCATTATTGTTGAAGGTTATAGGACTGAGCAAGATGCACTAAGGGAGATTCGGGTTGAAAAAGAGAGGGAAAATCAGAGCATGAGGGAAGAATATGAGTTTGCAAGAAAAAGGGATTTAGAAGAAGAAAGTGAAGCTAAGAAAAAGAAGGAAGAAGAAAAGCAAGATGCCGAGAGGGCTATACAAGCTGAAAAAGAGAGAAAACAAGATGAAGAACTTAGGAGACCACTGCACAAGGCTCAAAGTGAGGTGGAACAGTTGCAGGAAGTTGAAGGAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGTCAGAAAAAGAAAAATATGAAGAAAATGAAGGCCAGAATGCGACCGCATTTGGGTCGCATTCTAAAGAAGGCCAAGAAAAGGCCACTCAAGAAGACCAAGCTGACGAGGCCCTTGACCCACTGTTTGAGTATGACATTAGGGGACCTCCACCAACTGCTGATAGTACCTCTTCGGGAGAGAAGAAAGAAGAAGAGGAAATTGAAAAAGAAGAGGCCGAGACCTCCAGTGATTCAGAAACTGAGTCAGATTCTGAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTACAGCTTTGAGGAAGAGAAGAAGAAGAGAACTTAGGGCCGAGAGGAGGACCAAGAACAAAAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTTCTGCAGTTCCTCCTACCTCCACACCTGTCCAACCGAAAGCCAAATCACCTAAAGCTCCAAAGAATCTGTTTCCTGAAGTCTTCAGGGATGTCAATTTCCAGGAGAAGGATGAGATCATGAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAGAGCAGGGACCTTGCCAGACTTTGAGGCCGTGGTGCCTTTAGTTCGAGAATTCTATGCTGGACTGAGGGAAGAGAGCATGAGCATAGCAGTGGTGAGAGGTAAAATGGTCAGTTTCTCTTCTATTGACATTAACAGGGTGTACAGGATCCCAAACAAGGGAGTTCAATGGAAGGAGTCCCAAACAAAAGTGAAGACATTAGTGCCAAGCTATCTCAAGCTTGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGATTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGCTCCTCTACAACATCGTGAAAGGGTTGGAGATAAACATTGGGAGCATCATCAGTGAGGAGATTCTTTCTTTTCCTGGGAAAGATGAGGAACGTCACTTTTTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAGCAGAACAACGCCCAGAGAAAAGACAAAGCTTCCACTTCCCAAGCTACTCCACCACCAGGGTTGACACCTGTTTCACCTTCTCAACAGCATATTCCAATCTTAGGGCCTACACCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGTTGGACCGGATTGAAGATAAGTTGAAGGCTTACTGGGTCTATGCCAAAGAGAGAGATGAAGTTGTTAGAGAGTTTTACCTCTCTATCGCCCCCAGCATCGCCCCCGTGTCTCCTGACTTCCCTCAATCGCTGCTGCCTCAAGAAGAGAAAGAATCTGATGATGAAGATGAAGATGAAAGAGAGAGTTCCTTAGATGAGGACTATGGGAGTTTTCTGATCCCCTTTTATCTTCTATTTTGTGAATATTTTGCATAA

Coding sequence (CDS)

ATGAAAAACACGCCGAAATCATCCTCATCTCGCAAGATTACTCGATCTCAGAGTAATCAACGTGCACAAAGTGCTGAACCAAGTGCTCGACGTAAAGAAGAGCAACCCGAAGCTACGATGCACGGAACGAGAGGAGTGAGACCCACGGGTTTCTCGTCAGCGGTTGTGGACCAAAGAACCAGCGTCCAAACTCCTTCTTCCTCAACAATGCCGGCCACTTCGAGGGAGAATCCGAAGATGGGAGCCCAAAGGCGTGTGTCTCTTGAAGAAGAAGCCAGATTACGTGATGCTGAAGTAGCTGCAAAAATCAGAGAAAGCTCTCGGCAAGGAGAGACTCCAACGGGTAAGGCCGGTGGAGTCACTCCTCGTGTGCCTCCTCGTCTGCATCACCAGGCTCATAACACCCATCAACACCTGCATAATCTAAAAATGTTGGGGGGAGAAAGGGGAGGGGGTCAGTACAACCACGGTACTGGTAAGCAGCTCACACCCGCCGTTGGACAGCAAGGAGATCAGAATAGCGACAAAACCCACCGAAACGAGCCTAAAATCGCAGATCAGAATAGCAGCTCGGATTGGCGAAGAAGCGGCGGCGGCGACACACCTGCTGCAGCGGTGGCAGCGCGTTTAGGCAGCGGTGGCTGGCTTCACAGCAAGGGGAAGAAACCGAGAGGGGGAAGGAGAGAACCACAAGAGAGATCTGCAAAGAAGATGAAGAAAAAGACCCGCGCGAGAGAGAGAGACCTGGATAGGCCCTTCGTGACTTACAGTGCAAGAAAGAAGGATTCAAAGAAGGCTGCACCCGAAAAGCCCATGATTGTTGAGCCCTTTAAAGTGGCTAGAATGCCACTGGATATTTTCGAAGAGATGATCCGACAAGTCGTGGCACAAACCCTCATTATTGTTGAAGGTTATAGGACTGAGCAAGATGCACTAAGGGAGATTCGGGTTGAAAAAGAGAGGGAAAATCAGAGCATGAGGGAAGAATATGAGTTTGCAAGAAAAAGGGATTTAGAAGAAGAAAGTGAAGCTAAGAAAAAGAAGGAAGAAGAAAAGCAAGATGCCGAGAGGGCTATACAAGCTGAAAAAGAGAGAAAACAAGATGAAGAACTTAGGAGACCACTGCACAAGGCTCAAAGTGAGGTGGAACAGTTGCAGGAAGTTGAAGGAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGTCAGAAAAAGAAAAATATGAAGAAAATGAAGGCCAGAATGCGACCGCATTTGGGTCGCATTCTAAAGAAGGCCAAGAAAAGGCCACTCAAGAAGACCAAGCTGACGAGGCCCTTGACCCACTGTTTGAGTATGACATTAGGGGACCTCCACCAACTGCTGATAGTACCTCTTCGGGAGAGAAGAAAGAAGAAGAGGAAATTGAAAAAGAAGAGGCCGAGACCTCCAGTGATTCAGAAACTGAGTCAGATTCTGAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTACAGCTTTGAGGAAGAGAAGAAGAAGAGAACTTAGGGCCGAGAGGAGGACCAAGAACAAAAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTTCTGCAGTTCCTCCTACCTCCACACCTGTCCAACCGAAAGCCAAATCACCTAAAGCTCCAAAGAATCTGTTTCCTGAAGTCTTCAGGGATGTCAATTTCCAGGAGAAGGATGAGATCATGAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAGAGCAGGGACCTTGCCAGACTTTGAGGCCGTGGTGCCTTTAGTTCGAGAATTCTATGCTGGACTGAGGGAAGAGAGCATGAGCATAGCAGTGGTGAGAGGTAAAATGGTCAGTTTCTCTTCTATTGACATTAACAGGGTGTACAGGATCCCAAACAAGGGAGTTCAATGGAAGGAGTCCCAAACAAAAGTGAAGACATTAGTGCCAAGCTATCTCAAGCTTGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGATTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGCTCCTCTACAACATCGTGAAAGGGTTGGAGATAAACATTGGGAGCATCATCAGTGAGGAGATTCTTTCTTTTCCTGGGAAAGATGAGGAACGTCACTTTTTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAGCAGAACAACGCCCAGAGAAAAGACAAAGCTTCCACTTCCCAAGCTACTCCACCACCAGGGTTGACACCTGTTTCACCTTCTCAACAGCATATTCCAATCTTAGGGCCTACACCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGTTGGACCGGATTGAAGATAAGTTGAAGGCTTACTGGGTCTATGCCAAAGAGAGAGATGAAGTTGTTAGAGAGTTTTACCTCTCTATCGCCCCCAGCATCGCCCCCGTGTCTCCTGACTTCCCTCAATCGCTGCTGCCTCAAGAAGAGAAAGAATCTGATGATGAAGATGAAGATGAAAGAGAGAGTTCCTTAGATGAGGACTATGGGAGTTTTCTGATCCCCTTTTATCTTCTATTTTGTGAATATTTTGCATAA

Protein sequence

MKNTPKSSSSRKITRSQSNQRAQSAEPSARRKEEQPEATMHGTRGVRPTGFSSAVVDQRTSVQTPSSSTMPATSRENPKMGAQRRVSLEEEARLRDAEVAAKIRESSRQGETPTGKAGGVTPRVPPRLHHQAHNTHQHLHNLKMLGGERGGGQYNHGTGKQLTPAVGQQGDQNSDKTHRNEPKIADQNSSSDWRRSGGGDTPAAAVAARLGSGGWLHSKGKKPRGGRREPQERSAKKMKKKTRARERDLDRPFVTYSARKKDSKKAAPEKPMIVEPFKVARMPLDIFEEMIRQVVAQTLIIVEGYRTEQDALREIRVEKERENQSMREEYEFARKRDLEEESEAKKKKEEEKQDAERAIQAEKERKQDEELRRPLHKAQSEVEQLQEVEGEALEGPSEEKSEKEKYEENEGQNATAFGSHSKEGQEKATQEDQADEALDPLFEYDIRGPPPTADSTSSGEKKEEEEIEKEEAETSSDSETESDSEIKELDDDQIPISTALRKRRRRELRAERRTKNKNDPIFAKRPRTRSMDASSAVPPTSTPVQPKAKSPKAPKNLFPEVFRDVNFQEKDEIMRKRDFLNEKGFSNRAGTLPDFEAVVPLVREFYAGLREESMSIAVVRGKMVSFSSIDINRVYRIPNKGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVMLLYNIVKGLEINIGSIISEEILSFPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASTSQATPPPGLTPVSPSQQHIPILGPTPSSEALAFAFRQLDRIEDKLKAYWVYAKERDEVVREFYLSIAPSIAPVSPDFPQSLLPQEEKESDDEDEDERESSLDEDYGSFLIPFYLLFCEYFA

Homology

[Close]

BLAST of Spg015620 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-14
Identity = 83/299 (27.76%), Postives = 131/299 (43.81%), Query Frame = 0


Query: 599 VPLVREFYAGLREESMSIAVVRGKMVSFSSIDINRVY----------------------- 658
           +PLVREFYA L +   +   VRG  VS+S   IN V+                       
Sbjct: 14  LPLVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELIT 73

Query: 659 ---RIPNKGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVMLLY 718
               +   G +W  S     T + S L   + VW HF+K+RL+PTTH   +S +R++LL+
Sbjct: 74  VLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLH 133

Query: 719 NIVKGLEINIGSIISEEILSFPGKDEERHFFKPTI-----DLP-LIGKLQQNNAQRKDKA 778
           +++ G  IN+G +I  EI +   +     FF   I     + P L+ + + +N    D  
Sbjct: 134 SMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHNTGEIDAI 193

Query: 779 STSQATPPPGLTPVSPSQQHIPILGPTPSSEALAFAFR-------QLDRIEDKL------ 838
           + ++ T      P   +QQ      P+ S  A A + R       QL  +E +L      
Sbjct: 194 AVARITQE---GPTESTQQ------PSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHT 253

Query: 839 ----KAYWVYAKERDEVVREFYLSIAPSIAPVSPDFPQSLLP----QEEKESDDEDEDE 845
               + +W Y+KERD  +++   +      P  P FPQ +L     + E ESD +  +E
Sbjct: 254 HKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDLDYEYEAESDKDGSNE 303

[Close]

BLAST of Spg015620 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 87.8 bits (216), Expect = 5.0e-13
Identity = 81/306 (26.47%), Postives = 126/306 (41.18%), Query Frame = 0


Query: 596 EAVVPLVREFYAGLREESMSIAVVRGKMVSFSSIDINRVY-------------------- 655
           + +VPLVREFYA L +   +   VRG  VS+S   IN V+                    
Sbjct: 81  DPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQD 140

Query: 656 ------RIPNKGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVM 715
                  +   G +W  S     T + S L   + VW HF+K+RL+PTTH  T+S +R++
Sbjct: 141 LITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRML 200

Query: 716 LLYNIVKGLEINIGSIISEEI----------LSFPG--------------KDEERHFFKP 775
           LL++++ G  IN+G +I  EI          L FP                +EE+     
Sbjct: 201 LLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTG 260

Query: 776 TIDLPLIGKLQQN--NAQRKDKASTSQATPPPGLTPVSPSQQHIPILGPTPSSEALAFAF 835
            ID   + ++ Q       +  +S+  AT     T     QQ   +       E   +  
Sbjct: 261 EIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHM 320

Query: 836 RQ-LDRIEDKLKAYWVYAKERDEVVREFYLSIAPSIAPVSPDFPQSLLP----QEEKESD 845
              L     + + +W Y+KERD  +++   +      P  P FPQ +L     + E ESD
Sbjct: 321 MSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEILKDLDYEYEAESD 380

[Close]

BLAST of Spg015620 vs. NCBI nr
Match: KAE8718449.1 (hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus])

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-12
Identity = 74/285 (25.96%), Postives = 123/285 (43.16%), Query Frame = 0


Query: 601 LVREFYAGLREESMSIAVVRGKMVSFSSIDINRVYRIPN--------------------- 660
           LV+EFYA + + +     VRGK + F+SI INR + +                       
Sbjct: 77  LVKEFYANISKPNQHSIFVRGKQIRFTSIAINRYFHLQEVVDGHAMFEEEADSNKYDGVL 136

Query: 661 -----KGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVMLLYNI 720
                +  +W   QT   ++    L+  + +W HF+K++LMPT+H++T+S+ R++LL+++
Sbjct: 137 EDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSM 196

Query: 721 VKGLEINIGSIISEEILSFPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASTSQATPP 780
           +    I++G II +++    GK      F   I      K  + NA  +     S  T  
Sbjct: 197 IVSRPIDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEILPGLSGITRD 256

Query: 781 P-----GL-TPVSPSQQHIPILGPTPSS---------EALAFAFRQLDRIEDKLKAYWVY 840
                 GL  P S    H   +G T S+         EA+     QL  +   ++ ++ Y
Sbjct: 257 RLPLLLGLENPKSKDPVHEQSVGTTESNAEVRLLALEEAVTQTQAQLHALHGDIRNFFGY 316

Query: 841 AKERDEVVREFYLSIAPSIAPVSPDFPQSLLPQEEKESDDEDEDE 845
            K RD +V   +  I P      P FP  +LP    E+  E E +
Sbjct: 317 VKHRDVMVESLFQEIIPYGQRNFPGFPDEILPAFNAEASPEPEHD 361

[Close]

BLAST of Spg015620 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 84.3 bits (207), Expect = 5.5e-12
Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 0


Query: 598 VVPLVREFYAGLREESMSIAVVRGKMVSFSSIDINRVYRIPN------------------ 657
           VV +VREFYA + E    +A VRGK V F S  IN + R PN                  
Sbjct: 73  VVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDEYGQYLGDHQDCNE 132

Query: 658 -------KGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVMLLY 712
                  +G QWK S  +  +   S +K E  VWLHF+  RL+P+TH S ++ +R +L+Y
Sbjct: 133 IISTLCIEGAQWKTSHGEPVSFKRSVMKKELKVWLHFVAARLLPSTHISDVTKDRAVLIY 192

[Close]

BLAST of Spg015620 vs. NCBI nr
Match: KAE8707640.1 (hypothetical protein F3Y22_tig00110378pilonHSYRG00039 [Hibiscus syriacus])

HSP 1 Score: 77.8 bits (190), Expect = 5.1e-10
Identity = 72/283 (25.44%), Postives = 118/283 (41.70%), Query Frame = 0


Query: 601 LVREFYAGLREESMSIAVVRGKMVSFSSIDINRVYRIPN--------------------- 660
           LV+EFYA + + +     VRGK + F+S  IN  + +                       
Sbjct: 72  LVKEFYANISKPNQHSIFVRGKQIHFTSTAINCYFHLQEVVDGHAMLEEEADSNTYDGVL 131

Query: 661 -----KGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVMLLYNI 720
                +  +W   QT   ++    L+  + +W HF+K++LMPT+H++ +S+ R++LL+++
Sbjct: 132 EDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTIVSLSRLLLLHSM 191

Query: 721 VKGLEINIGSIISEEILSFPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASTSQATPP 780
           +    I++G II +++    GK      F   I      K  + NA  +     S  T  
Sbjct: 192 IVSRPIDVGRIIVQQVHDCLGKKASALVFPNLITALCHKKKVEENAFDEILPGLSGITRA 251

Query: 781 P-----GL-TPVSPSQQHIPILGPTPS-SEALAFAFR--------QLDRIEDKLKAYWVY 840
                 GL  P S    H    G T S +EA   A          QL  +   ++ ++ Y
Sbjct: 252 RLPLLLGLENPKSKDPVHEQSAGTTESNAEARLLALEEDVTQTQAQLHALHGDIRNFFGY 311

Query: 841 AKERDEVVREFYLSIAPSIAPVSPDFPQSLLPQEEKESDDEDE 843
            K RD +V   +  I P      P FP  +LP    E+  E E
Sbjct: 312 VKHRDAMVESLFQEIIPHGQRNFPGFPDEILPAFNAEASPEPE 354

[Close]

BLAST of Spg015620 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-14
Identity = 83/299 (27.76%), Postives = 131/299 (43.81%), Query Frame = 0


Query: 599 VPLVREFYAGLREESMSIAVVRGKMVSFSSIDINRVY----------------------- 658
           +PLVREFYA L +   +   VRG  VS+S   IN V+                       
Sbjct: 14  LPLVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELIT 73

Query: 659 ---RIPNKGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVMLLY 718
               +   G +W  S     T + S L   + VW HF+K+RL+PTTH   +S +R++LL+
Sbjct: 74  VLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLH 133

Query: 719 NIVKGLEINIGSIISEEILSFPGKDEERHFFKPTI-----DLP-LIGKLQQNNAQRKDKA 778
           +++ G  IN+G +I  EI +   +     FF   I     + P L+ + + +N    D  
Sbjct: 134 SMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHNTGEIDAI 193

Query: 779 STSQATPPPGLTPVSPSQQHIPILGPTPSSEALAFAFR-------QLDRIEDKL------ 838
           + ++ T      P   +QQ      P+ S  A A + R       QL  +E +L      
Sbjct: 194 AVARITQE---GPTESTQQ------PSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHT 253

Query: 839 ----KAYWVYAKERDEVVREFYLSIAPSIAPVSPDFPQSLLP----QEEKESDDEDEDE 845
               + +W Y+KERD  +++   +      P  P FPQ +L     + E ESD +  +E
Sbjct: 254 HKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDLDYEYEAESDKDGSNE 303

[Close]

BLAST of Spg015620 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-13
Identity = 81/306 (26.47%), Postives = 126/306 (41.18%), Query Frame = 0


Query: 596 EAVVPLVREFYAGLREESMSIAVVRGKMVSFSSIDINRVY-------------------- 655
           + +VPLVREFYA L +   +   VRG  VS+S   IN V+                    
Sbjct: 81  DPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQD 140

Query: 656 ------RIPNKGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVM 715
                  +   G +W  S     T + S L   + VW HF+K+RL+PTTH  T+S +R++
Sbjct: 141 LITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRML 200

Query: 716 LLYNIVKGLEINIGSIISEEI----------LSFPG--------------KDEERHFFKP 775
           LL++++ G  IN+G +I  EI          L FP                +EE+     
Sbjct: 201 LLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTG 260

Query: 776 TIDLPLIGKLQQN--NAQRKDKASTSQATPPPGLTPVSPSQQHIPILGPTPSSEALAFAF 835
            ID   + ++ Q       +  +S+  AT     T     QQ   +       E   +  
Sbjct: 261 EIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHM 320

Query: 836 RQ-LDRIEDKLKAYWVYAKERDEVVREFYLSIAPSIAPVSPDFPQSLLP----QEEKESD 845
              L     + + +W Y+KERD  +++   +      P  P FPQ +L     + E ESD
Sbjct: 321 MSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEILKDLDYEYEAESD 380

[Close]

BLAST of Spg015620 vs. ExPASy TrEMBL
Match: A0A6A3BU96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00240 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-13
Identity = 74/285 (25.96%), Postives = 123/285 (43.16%), Query Frame = 0


Query: 601 LVREFYAGLREESMSIAVVRGKMVSFSSIDINRVYRIPN--------------------- 660
           LV+EFYA + + +     VRGK + F+SI INR + +                       
Sbjct: 77  LVKEFYANISKPNQHSIFVRGKQIRFTSIAINRYFHLQEVVDGHAMFEEEADSNKYDGVL 136

Query: 661 -----KGVQWKESQTKVKTLVPSYLKLESTVWLHFIKNRLMPTTHDSTISVERVMLLYNI 720
                +  +W   QT   ++    L+  + +W HF+K++LMPT+H++T+S+ R++LL+++
Sbjct: 137 EDLCFENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSM 196

Query: 721 VKGLEINIGSIISEEILSFPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASTSQATPP 780
           +    I++G II +++    GK      F   I      K  + NA  +     S  T  
Sbjct: 197 IVSRPIDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEILPGLSGITRD 256

Query: 781 P-----GL-TPVSPSQQHIPILGPTPSS---------EALAFAFRQLDRIEDKLKAYWVY 840
                 GL  P S    H   +G T S+         EA+     QL  +   ++ ++ Y
Sbjct: 257 RLPLLLGLENPKSKDPVHEQSVGTTESNAEVRLLALEEAVTQTQAQLHALHGDIRNFFGY 316

Query: 841 AKERDEVVREFYLSIAPSIAPVSPDFPQSLLPQEEKESDDEDEDE 845
            K RD +V   +  I P      P FP  +LP    E+  E E +
Sbjct: 317 VKHRDVMVESLFQEIIPYGQRNFPGFPDEILPAFNAEASPEPEHD 361

The following BLAST results are available for this feature:

BLAST of Spg015620 vs. NCBI nr


Match Name	E-value	Identity	Description
PON78020.1	5.9e-14	27.76	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON46472.1	5.0e-13	26.47	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
KAE8718449.1	1.4e-12	25.96	hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]	[more]
EOY13933.1	5.5e-12	37.41	Uncharacterized protein TCM_032752 [Theobroma cacao]	[more]
KAE8707640.1	5.1e-10	25.44	hypothetical protein F3Y22_tig00110378pilonHSYRG00039 [Hibiscus syriacus]	[more]

BLAST of Spg015620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5DXM3	2.8e-14	27.76	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5BCG4	2.4e-13	26.47	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A6A3BU96	7.0e-13	25.96	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilon...	[more]

BLAST of Spg015620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 309..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 738..769
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 533..547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 738..754
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..555
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..526
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 823..851
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 834..849

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015620.1	Spg015620.1	mRNA