Spg015577 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015577
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA/RNA polymerases superfamily protein
Location	scaffold10: 15075870 .. 15080581 (-)
RNA-Seq Expression	Spg015577
Synteny	Spg015577

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTAAAAACTAAGAAGAATGGTGGAAAGGGGGAGAGAGATGGACTACAATGTTGTAGTGAATTGTGTGTTGAGGGATGATTCTAAACCTACACCAAAGGCCTCTATTTATAGAGTTTCTTGGCCTTCAATTCGTGGTACAATGGTGCTGAATTGGGTCTTCAAACAAGGAAAAATTCTGGCCAAAATTGGAAAAAATCGATTCTGGTAAATTGCCTAGCGTCGCGACACTAGGACAGCGTCGCGACGCTATGCCTTCAATATGGAAAAAATCTGCGAATCACTCGTAGCGTCGCGACGCTCTTGCTGAAACTTCACGCCCAGGCTTTTTCCTAATTTGAGCGGCGTCCCGACCCTTCAACGCAAGCGTCTCGACGCTGGGATGGCTCCAAGGGCAGAATGGTCATTTAACGCTCTGGTTTCGCTCGTTTAAGCCCCGAATCGCTTCCAAAGCTCCAGTGAGGACCTATAGACATATTATACTCATTTTAAAGCATTTTTCGCAAGGAATTCAACTAAGATAAGCAAATTGGGAGATTCTAAGTGTATAATAAATTAGACCTATCAGATTGATGTAGTCTTTTTAGTTTATGGATTGACTTATGGGTTGAATTGTGCAATTGTTTTATGTTTGCATTCTTAATTTAATGCTTTCAATTAATTGGCCACTAGTTGAATGATCTAAGTGTTGAGTCTTGCTCGGGAGAGGGGATTTAGCGTAGACTTAATTAAGATTGCATGACTAGAGTAGAAATTCTGAACTCGTGACGGAAATTAGAGTAACTTTAGAATTGGTCAAAAAGAACTAAATGCCTTGCATGTTAAAGAACTTAGATAGGGATATCAAGTTAGTTAATTTGCATGAGAATCAATTATACTTGGGAGTGGTAGTTGTGATTAAAGGTTCTTAGACTCATAAAACCATTGTGCGTTATAATTCATTCCCTAAAATCAATCCTAGATTAAATTGACGAAATCAATTCCCTAAGTATTCTCTCAATTGAATTTCACATCTTTAATTTGCATTACCTTAGTTTCTAAAATTCACTACTTTTTGGTCCCTAAATAAAATTGAACAAGAATATTCATGGTAGTTAATCTAACTTAAAAATCCGATCCAGAGGACGACACTCGATTTCACAATCACTTTACTATTACTTGACCCGTGCGCTTGCGGTAGGAAAATTCCACATCAATTCTTTATTCATTATTTCAACGGAAAGTTGTTCATTTGCATTATATTCCATCATGCGTAGCTAAATTCCATTGAGGGGTTTGATATAGTGAATTCCCTTATGGTGTAAATGGCTTGAAAGTGCTTATTTGCCTAGGTTTTATTTATAACCTGTCACTCTTTATTGAATATCATTTTGAATCTTGCTGAGTTTAACTTGATCACTTAGACTTTGCATGCTATGTGAGTTTGATCCTGAAAGGGACAAGCAATATCAGTTTTCATAAAGGTGATATAGGAGAAAGGGCTCGAAAGAGTGTATTCGGTGTTATAAGGGAAGGTCACCTTATAACAACTATAGGGTTATAGGTTGCATGCATGAACTATCTATGTCGGAGTCGAGTCACAGAAATGTGCATAACGGTACTCGCTTAGCCTTCTAACGGTTCTTGGAAGCAAGGCCAAATAGAAGTTAAATCTGACCCAATGCATGAATAGACTTAGGTTAAATAAACCATGATTAGAGTTATTTGCCTTAGGGTTGAAGCTATATTGAATACCTCGCTTATTTATTATTGTTTTCCTTTACTTGTTTATTTCTTTGCTTTACAAAACCCAACATCAACTATTTCATTTGGATACCTTTCAAAAGCAATCTTTGGGCAGTTTCTTCTTCAAATCTGTGTCTCCAAATTAGTCCATGTGGGATCGATACCTTTGGAATATTTCCAGAGATTTTATTACTATATGCGATAGTGTATACTTGCACTTGGTTGGCTGAAACTATTCTTATTCTTTATTTATCATCTTTTCGTAACATCCACATTCAGTCTAACACGCATCACCCAACTACTGGGGTTATGATATGCAAACACATACAACATGGTTCATGCTTTTCTAGTGATCATGTTTCATGCATTTCTAGTGGGACCCTATTCCTCTATCCTCTTAATTATGTGTAACTGTTGGGTTTCCAGAGTAGGTAAAAATAAGGTAAAAATAGACTCTAGAACACTGTGCAAGCATACACAATCCGCAGCAAGTAATAAGTATTTATCGAATCCAGGGTCTGAATAGCTCTCACTACCATATAGCCTTGGGCTCAATATCTCAGTCATGTAGTCAATAAAAGTCTCAGAAAACCACATGAAAACATTAAAACATGTCTGCTTATCTTTATCTTTCGTAAAACTCAATGTAAACTCGAGACTTTCTTTGGGATCATTTCCTCTTGTATTGTGGTTTCATGGTTGATTTTAAGTTGTTGGGATTCTCTAATTTAAAAGAAGAAGAAAAGAATGGAAAAATGGAAGAAAAGAAAAGGAAAAGAAAAGGAAAAGGGAAAAAGAAAAAAAAAAAAAAAGGAAATGGGAACTAACCCATTCGGTGGGTAGTGGATTTGGGAAGAACCCACCACCGACAGCTTTTTTTTACCAGCCCATTACCAGCCATTTTTCCATCATTTTCGATCCAAAGCTTCAGAGCACTTGAGGGAGAGAGTGAAGGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGATCAACCTGTCAACCGGTTTTTTATTCGGTTTAAGCTACACAGAAGGAACTAAGAGGTGAGGTTTGATTTTCTTGAAATTTAGTTCATTTTCTAACAAATTTCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTTGTATGGTTGGAAAGTTTATTCAATTTCCTACAACTTTCATGAAGAATTCATGAGCCCAAAATGACTTGAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAGCAGAAAACCTCGAATCTGTCTTGTCTGTGTTCGGGGCGTTTCTGGGCCAATTGGTTGACTCTTCATGTATAGTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGAGTGTTGGAAGTTGTGGTGTAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAGAAATTCATGAGCATGGAAAGACAAAGCTAATTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGCTAAGACAGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTAGATGTTTTACATGCTTTCCTATGAATGATTCATGATTTCTATTAACGGTTTCAAGCATGAGTCTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGCTAATGACTTTATGAAAAGTAGTTGAAACGATATCTTTTAAAGTAAAGTATGTGTTAGCAAGTATTGTTTAATGATTTAAAGTTTTTCATGAGCAAGCCGAGTAAGCTTGAGTTTTACGAAAGATAACGATAAGCAGACATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGATTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACCTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACATAGATCGGTCATGTTAGTTAAAACATTTGATGTACTTAATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATGTTTTGGAAAGCCTTTATCCTTACACGTTTATGTTAAACACTTTGGTTTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCGAATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGTAATGTTTTGTAAGGGTTGGATAATTTACGGTTTAATTTAGGTTCTAGAGGTCGTGGTTGTATAAACCCCAGTTGAATATGTTTTGGGTTGTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGCTGCACCTCGCGTATGTTAAAAGGTTTCCAGGGATTCCGCTGTGTTGTGTTTCATGTAGAATATTTTATATCTAAGATTAGTATGTTTATCAGGTTCTACGTTCCAGGAGGGTCATCGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGCGGTCCGGGAGGGGGTGTGACACTCAAGCTTACTCAGCTTGCTCATGAAAAACTGAAAATTTTTTAA

mRNA sequence

ATGGTGGAAAGGGGGAGAGAGATGGACTACAATGTTGTAGTGAATTGTGTGTTGAGGGATGATTCTAAACCTACACCAAAGGCCTCTATTTATAGAGTTTCTTGGCCTTCAATTCGTGGTACAATGGTGCTGAATTGGGTCTTCAAACAAGGAAAAATTCTGGCCAAAATTGGAAAAAATCGATTCTGGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGATCAACCTGTCAACCGGTTTTTTATTCGGTTTAAGCTACACAGAAGGAACTAAGAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTTATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACCTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGTTATTTTCCAAACCGAGTTATGTCAGGGCTGCACCTCGCGTTCTACGTTCCAGGAGGGTCATCGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGCGGTCCGGGAGGGGGTGTGACACTCAAGCTTACTCAGCTTGCTCATGAAAAACTGAAAATTTTTTAA

Coding sequence (CDS)

ATGGTGGAAAGGGGGAGAGAGATGGACTACAATGTTGTAGTGAATTGTGTGTTGAGGGATGATTCTAAACCTACACCAAAGGCCTCTATTTATAGAGTTTCTTGGCCTTCAATTCGTGGTACAATGGTGCTGAATTGGGTCTTCAAACAAGGAAAAATTCTGGCCAAAATTGGAAAAAATCGATTCTGGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGATCAACCTGTCAACCGGTTTTTTATTCGGTTTAAGCTACACAGAAGGAACTAAGAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTTATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACCTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGTTATTTTCCAAACCGAGTTATGTCAGGGCTGCACCTCGCGTTCTACGTTCCAGGAGGGTCATCGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGCGGTCCGGGAGGGGGTGTGACACTCAAGCTTACTCAGCTTGCTCATGAAAAACTGAAAATTTTTTAA

Protein sequence

MVERGREMDYNVVVNCVLRDDSKPTPKASIYRVSWPSIRGTMVLNWVFKQGKILAKIGKNRFWRKKKKIFVVLRLKKIGKAHAKPAIAESEINLSTGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRAFWGVQVESEALFYIEPEAIWYRVHTGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSLEEDDVRWLHAIFRTKLAGGPGGGVTLKLTQLAHEKLKIF

Homology

[Close]

BLAST of Spg015577 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 5.1e-25
Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 136 ESEALFYIEPEAIWYR-----VHTGYI------PLLTLSVLRDNDAVVEIELPVPDTLPT 195
           +S    Y+E +  W R     + TG +      PL TLSVLRDNDAVVEIELP+PDTLPT
Sbjct: 289 KSNQKLYLEIDKEWPRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPT 348

Query: 196 SAESSRSSSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSLEEDDVRWLHAIFR 255
           SAESS S+SSTW+ELY ESVH+ +   +      +     EG    +  DDV WLHAIFR
Sbjct: 349 SAESSGSNSSTWLELYFESVHVEMLFYKPSDARAASYVCWEGSAGIVRGDDVCWLHAIFR 408

Query: 256 TKLAGGPGGGVT 257
            K AGGPGGGVT
Sbjct: 409 AKTAGGPGGGVT 420

[Close]

BLAST of Spg015577 vs. NCBI nr
Match: KAA0040194.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 5.1e-25
Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 136 ESEALFYIEPEAIWYR-----VHTGYI------PLLTLSVLRDNDAVVEIELPVPDTLPT 195
           +S    Y+E +  W R     + TG +      PL TLSVLRDNDAVVEIELP+PDTLPT
Sbjct: 289 KSNQKLYLEIDKEWPRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPT 348

Query: 196 SAESSRSSSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSLEEDDVRWLHAIFR 255
           SAESS S+SSTW+ELY ESVH+ +   +      +     EG    +  DDV WLHAIFR
Sbjct: 349 SAESSGSNSSTWLELYFESVHVEMLFYKPSDARAASYVCWEGSAGIVRGDDVCWLHAIFR 408

Query: 256 TKLAGGPGGGVT 257
            K AGGPGGGVT
Sbjct: 409 AKTAGGPGGGVT 420

[Close]

BLAST of Spg015577 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-24
Identity = 68/126 (53.97%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 132  GVQVESEALFYIEPEAIWYRVHTGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRS 191
            G  V  + L  +E      +++     L TLSVLRDNDAVVEIELPVPDTLPTSAES  S
Sbjct: 1390 GFMVFYDTLSILEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLES 1449

Query: 192  SSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSL-EEDDVRWLHAIFRTKLAGG 251
            +SSTW+ELY ESVH+ +F     QG +          V +   DDV WLHA+FR K AGG
Sbjct: 1450 NSSTWLELYFESVHVEMFCYFTNQGMSGLHLMLNVGSVGIVRGDDVCWLHAVFRAKTAGG 1509

Query: 252  PGGGVT 257
            PGGGVT
Sbjct: 1510 PGGGVT 1515

[Close]

BLAST of Spg015577 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-24
Identity = 68/126 (53.97%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 132  GVQVESEALFYIEPEAIWYRVHTGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRS 191
            G  V  + L  +E      +++     L TLSVLRDNDAVVEIELPVPDTLPTSAES  S
Sbjct: 1390 GFMVFYDTLSILEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLES 1449

Query: 192  SSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSL-EEDDVRWLHAIFRTKLAGG 251
            +SSTW+ELY ESVH+ +F     QG +          V +   DDV WLHA+FR K AGG
Sbjct: 1450 NSSTWLELYFESVHVEMFCYFTNQGMSGLHLMLNVGSVGIVRGDDVCWLHAVFRAKTAGG 1509

Query: 252  PGGGVT 257
            PGGGVT
Sbjct: 1510 PGGGVT 1515

[Close]

BLAST of Spg015577 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-23
Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 154 TGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHIVI---FQ 213
           T   PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY ESVH+ +   F 
Sbjct: 76  TVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFT 135

Query: 214 TELCQGCTSRSTFQEGHRVSLEEDDVRWLHAIFRTKLAGGPGGGVT 257
            ++        +   G    +  DDV WLHA+FR K  GGPGGGVT
Sbjct: 136 NQVMSRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]

BLAST of Spg015577 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-25
Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 136 ESEALFYIEPEAIWYR-----VHTGYI------PLLTLSVLRDNDAVVEIELPVPDTLPT 195
           +S    Y+E +  W R     + TG +      PL TLSVLRDNDAVVEIELP+PDTLPT
Sbjct: 289 KSNQKLYLEIDKEWPRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPT 348

Query: 196 SAESSRSSSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSLEEDDVRWLHAIFR 255
           SAESS S+SSTW+ELY ESVH+ +   +      +     EG    +  DDV WLHAIFR
Sbjct: 349 SAESSGSNSSTWLELYFESVHVEMLFYKPSDARAASYVCWEGSAGIVRGDDVCWLHAIFR 408

Query: 256 TKLAGGPGGGVT 257
            K AGGPGGGVT
Sbjct: 409 AKTAGGPGGGVT 420

[Close]

BLAST of Spg015577 vs. ExPASy TrEMBL
Match: A0A5D3DR18 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00320 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-25
Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 136 ESEALFYIEPEAIWYR-----VHTGYI------PLLTLSVLRDNDAVVEIELPVPDTLPT 195
           +S    Y+E +  W R     + TG +      PL TLSVLRDNDAVVEIELP+PDTLPT
Sbjct: 289 KSNQKLYLEIDKEWPRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIELPLPDTLPT 348

Query: 196 SAESSRSSSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSLEEDDVRWLHAIFR 255
           SAESS S+SSTW+ELY ESVH+ +   +      +     EG    +  DDV WLHAIFR
Sbjct: 349 SAESSGSNSSTWLELYFESVHVEMLFYKPSDARAASYVCWEGSAGIVRGDDVCWLHAIFR 408

Query: 256 TKLAGGPGGGVT 257
            K AGGPGGGVT
Sbjct: 409 AKTAGGPGGGVT 420

[Close]

BLAST of Spg015577 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-24
Identity = 68/126 (53.97%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 132  GVQVESEALFYIEPEAIWYRVHTGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRS 191
            G  V  + L  +E      +++     L TLSVLRDNDAVVEIELPVPDTLPTSAES  S
Sbjct: 1390 GFMVFYDTLSILEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLES 1449

Query: 192  SSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSL-EEDDVRWLHAIFRTKLAGG 251
            +SSTW+ELY ESVH+ +F     QG +          V +   DDV WLHA+FR K AGG
Sbjct: 1450 NSSTWLELYFESVHVEMFCYFTNQGMSGLHLMLNVGSVGIVRGDDVCWLHAVFRAKTAGG 1509

Query: 252  PGGGVT 257
            PGGGVT
Sbjct: 1510 PGGGVT 1515

[Close]

BLAST of Spg015577 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-24
Identity = 68/126 (53.97%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 132  GVQVESEALFYIEPEAIWYRVHTGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRS 191
            G  V  + L  +E      +++     L TLSVLRDNDAVVEIELPVPDTLPTSAES  S
Sbjct: 1390 GFMVFYDTLSILEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLES 1449

Query: 192  SSSTWVELYIESVHIVIFQTELCQGCTSRSTFQEGHRVSL-EEDDVRWLHAIFRTKLAGG 251
            +SSTW+ELY ESVH+ +F     QG +          V +   DDV WLHA+FR K AGG
Sbjct: 1450 NSSTWLELYFESVHVEMFCYFTNQGMSGLHLMLNVGSVGIVRGDDVCWLHAVFRAKTAGG 1509

Query: 252  PGGGVT 257
            PGGGVT
Sbjct: 1510 PGGGVT 1515

[Close]

BLAST of Spg015577 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.0e-24
Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 154 TGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHIVI---FQ 213
           T   PL TLSVLRDNDAVVEIELPVPDTLPTSAESS S+SSTW+ELY ESVH+ +   F 
Sbjct: 76  TVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFT 135

Query: 214 TELCQGCTSRSTFQEGHRVSLEEDDVRWLHAIFRTKLAGGPGGGVT 257
            ++        +   G    +  DDV WLHA+FR K  GGPGGGVT
Sbjct: 136 NQVMSRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

The following BLAST results are available for this feature:

BLAST of Spg015577 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25935.1	5.1e-25	53.79	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0040194.1	5.1e-25	53.79	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0042035.1	5.7e-24	53.97	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK17971.1	5.7e-24	53.97	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0062409.1	1.6e-23	60.38	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Spg015577 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015577 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9P7	2.5e-25	53.79	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G000...	[more]
A0A5D3DR18	2.5e-25	53.79	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G0032...	[more]
A0A5A7TKT0	2.7e-24	53.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3D150	2.7e-24	53.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7V9N3	8.0e-24	60.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15...	[more]

BLAST of Spg015577 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015577.1	Spg015577.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016740	transferase activity