Spg015576 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015576
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotrans_gag domain-containing protein
Location	scaffold10: 16090486 .. 16099665 (+)
RNA-Seq Expression	Spg015576
Synteny	Spg015576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCCAGCCATTGCAGAATCTGCGTTCAACCTGGCAACCTCTGGTTGTTTAGTCGGTTTGAGCTACACAGAAGGAATCAAGAAGTGCGGTTTGATTTTCTTGAAAGCTAGTTCATTTTCTAACAAATTTCATGAAGGAAGCTTGACCTAAATCGAATGGGAAGTTGATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTATCTACAACTTTCATGAAGAATTCGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGAAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCCCATTTTTATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGATTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTGTGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTAGACGTTTTATATGCTTTACCATGAATGATATATGATTTTTATGAACGGTTTCAAGCATAAATTTTGAGCTCAGATTTTCTAACGAGGTTTATATACGAGCACGTGGCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTACTTCTAAACGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGTTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGACTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGAGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGATTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAATTAGAACGTTTGATGTACTTGATATGCCTTGCTACATTTTTTAATGACGAACTTGCGAGATATTTTAGCAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACATGTTTGACTTCCGGATTTAGAGTTTTAAAGTTTGTCACTCACTGGGCTTCGTAGCTCATCCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTACAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATGTCTATGATTAGTATGTTTATCAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAAGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAAATGAGACATGGCAGTTAGTGCTAAGAAAATCCAGGAAGTAAATAGTTAGACGTTTGGTCAGTTCGATAGAACTAGCGGAGTATGGTCTGAGTATTGTTGAGAGTGAGTGCAGTCAGGACTAGAATGTGGGTATAAGGTTAGTATCATGCATCTGAGTTAAGTATTTATAGCATGTCTGATGTGTTGATATGTTATAGGAGTCATGCCACCACGTATCAGCAGACGACGCAGGCAGAATCAGGACGGGACGCAGGATCCTACCCAAAGTCAATCTGAAAGGGTATCCAGTACCCCAAGAGGTCAGAATGAGGCAGGGAGTGAGCGATTTGCTAGATCTGCACAGGAGATCGGTAGGCCAGAGAGAGCAGGGCCTAGTGATCCGGAAAAGACGTATGGGATTGAACGGTTGAAGAAGTTAGGAGCCACTGTGTTTGAGGGTTCCACGGATCCAACTGATGCTGAGGTCTGGTTGAATATGTTGGAGAAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGAAAAGTCAAATTAGCCACATTCCTTTTGCAGAAGGAGGCGGAAGGATGGTGGAAGTCCATTATAGCCAGGCGCAGTGATGCACGTACGTTAGATTGGCAGACATTCAGGGGCGTATTCGAGGAAAAGTACTACCCCACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGGAGCTGAAACAAGGGTCACTTTCAGTGGCCGAGTACGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGAAGTGATTGTGGCATCGGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCCCAGTTACCGCTATTGCCAAGTGGACGAATTTTTCCCAGCTAGTAGAGACTGCCTTACGTGTGGAGCAGAGTATTATAGAGGAAAAGGCGGCATTGGAGCCTAGTCGTGGAGCTCCAACAGCTAGTGGTTTTCGGGGTCGTGAGCAGCGGAGGTTCACACCTGGAGTGAATGTTTCAAGTCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAGTTATCAAGGCATATGAGTTCGGGTAGTGCCTATCAGAGGCAGAGTCAGAGAGCCCCCAGTCAGTCTGCGAGTTCGGTAGCAAGACCACGAACGGGTCAGGAGTCCGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGCAAGAATCATCGGGGTCAATGTCTTGTTGGCACCAGTGTGTGTTACCAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGCCCACAGCTGAGGGCAGCAGTTCAGGAGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCGAGAATCCCAGCAGCCACAGGAGAGGGAACCAGTGGTGCAAGGCAAAAGGGAGTTGTGGGGAGACCTAGGCAGCAGGGAAAAGTCTACGCCATGACTCAACAGGAAGAAGAGGATGCACCAGATGTGATCACTGGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGCGCTACGCATTCCTTTGTTTCTAGTATGTTCTTAACTAAGCTGGATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATGCACTCCAGTTGGTGACATTTTATTAGTTAATGAGGTGTTGCGTGATCGTGAGGTTGTAGTAGAAGGTCTCTGTATGTTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATGGATTTCCTATTCACTCATTATGTTTCTATGGATTTCCATAGGAAGGAAGTGACTTTTAAGAAACCAGGTTCGACTGAAGTAGTTTTCAGAGGTGAGAGGAAGATTATTCCTATGAGTTTGATTTCAGCTCTGAAAGCTGAGAAGTTGTTGAGGAAGGGTTGTACAGCGTTTCTTGCACACGTAGTAGAGGTGCAAGAAGAAAAGCTGAAAGCAGAAAATGTTCTTGTGGTGAACGAATTCTTGATGTTTTCCCAGCTGATTTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACATCACCTATTTCACAGGCACCATACAGGATGGCTCCGAGCGAGCTTAAGGAGCTGAAGGTGCAGTTGCAAGAACTAGTTGACAAGGGATACATCAGGCCTAGCGTATCACCTTGGGGAGCTCCAGTATTATTCGTGAAGAAGAAAGATGGTACCCTGAGATTATGCATTGATTACAGGCAGTTAAACAAGGTCACGATACGTAACAAGTATCCTCTACCATGCATCGATGACTTGTTTGACCAGTTAAGGGGAGCAGCAGTGTTCTCTAAAATTGATCTGAGGTCAGGATACCACCAGCTGAAGGTTAAGGAATCAGATATTCCTAAGACAGCATTCAGGACGAGGTATGGGCACTATGAGTTTTTAGTGATGCCATTCGGTTTAACGAATGCGCCAGCAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATCGATGACATACTAGTTTACTCAATTGACAGGAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACACTACGTGATAAACAGCTATACGCTAAGTTCAGCAAATGTGAGTTTTGGTTGAATCAAGTGGTGTTCTTAGGGCATGTAGTTTCAGCGGACGGATGTAGTGTTGACCCGCAGAAAGTGGAAGCTGTTGTCCACTGGGAGAGACCAGCTAGTGCATCAGAGGTTCGTAGTTTCCTAGGCCTGGCCGGATACTACAGACGTTTTGTTGAGGATTTCTCACGGTTAGCACTACCCTTGACAGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGCGAACAGAGTTTCCAGGAGCTGAAGAAGAGATTGGTGACAGCACCTATTCTAGCACTTCCTGTAACAGGGAAGGAGTATGTGATCTATTGTGATGCTTCAAGGCAAGGATTAGGTTGTGTGCTGATGCAGGAAGGAAAGGTGATAGCTTATGCTTCAAGGCAGTTGAAGAAGCATGACTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTGAAGATCTGGAGGCATTATTTATTCGGTGAGAAGTGCCACATTTTCACAGATCATAAGAGTCTGAAGTACATCTTTGATCAGAAAGAGCTGAATCTAAGGCAGAGGCGATGGCTAGAACTGATTAAAGATTATGACTGCACCATAGATTATCATCCAGGTAAGGCTAACGTGGTAGCAGATGCGTTAAGTAGGAAGTCGAGACTTCCGAAGAGCACTTTGTGTGGTATTCGAGCAAGCTTGCTATGTGAGTTAAGAGGTTTCAAGGCAGTTATGACTGCAGGAAGCTCAGGGAGTCTTCTAGCTCAATTTCAGGTTAGGTCTTCTTTAGTAGCAGAGATTGTGGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCTTGCAAAGTCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAACAGACGGAGCCATAGTTAAGCAGGGAAGACTATGTGTTCCGAGTATTAGTGAGCTTAAGAGTGCTATACTAGAGGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGAAGCACCAAGATGTATAGAACTCTGAAGAAAACTTATTGGTGGCCTGGTATGAAGCGGGAGATAGCTGAATATGTCGACAGATGTTTGATCTGCCAACAGGTTAAACCAGTGAGACAGAGGCCAGGAGGACTCCTTAATCCACTGCCAGTGCCAGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCTCGTACTTCTAGTGGACATGATGGTATATGGGTAATAGTGGATAGACTCACCAAGACAGCGCGGTTTATATCGATTAAAGCGATGTCTACACTAGATCAGCTAGCTAAACTATACGTCGACAGGATTGTGAGTCAACATGGAGTGCCAATGTCCATAGTTTCAGATAGGGATCCAAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCATAAAGCAATGGGAACAAAGTTGAAGTTCAGTACAGCATTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTTGAGAGCATGTGTCTTTCAGTTTAAGGGAAGTTGGGATACTCACTTATCACTTATGGAGTTCGCTTATAATAACAGCTATCAGTCTAGTATCGGCATGGCACCATTCGAGGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAGCGAAAGCTAGTTGGTCCTGAGTTGGTACAAGTTACGTCAGACAATATTAAGCTGATTAGGGAGAACCTGAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGGTAAGCGACGAAGAGACTTAGAGTTCCAAGTTGGAGATCGAATTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTCTTCGCTTTGGGAGGAAAGGTAAGCTAAGTCCTAGATATATTGGTCCTTACCAGATATTAGAACGAGTTGGACCAGCAGCCTATAGACTTGAATTGCCAGCGGAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATGTTGAGGAAATATATTCCAGATCCATCACATGTGTTGCAAGGGCAACCGATTGAACTGAAAGAAGACTTGAGTTATAAGGAGGAAGCGGTTCAGATCCTCGACAGGAAGGAGCAAGTTTTGAGGAACAAAACGATCCCACTGGTGAAAGTTCTTTGGAGACACCACGGAGTAGAGGAGACAACCTGGGAGTCAGAAGATCAAATGAGGAGGAGTTACCCGACACTCTTCACCTAAGAACTTCTAAATTTCGAGGACGAAATTTCATAAGCGGGAGGTAAGTTGTAAACCCGAGACTTCTCTAGGATCATTTTCTCTTGTCATCTCTTGTTGGGATTACTAAGTTAAAAGAAGAAAGGAAAGAAAAGAAAAGGAAAAGGAAAAGGAAATCAGCAAAAAAAAAAAAAAAAAAAGAAAAGAAAGAAGATGGGAAATGACAGCTCAAAAACCCACCACCGACTAAACTCTTTTTCAGCCCATTTCCATCTCATTTCTCATCCTTTTCCATTGAAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAAGAAGGAGAAGATGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGAAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGCGTTCAACCTGGCAACCTCTGGTTTTTTAGTCGGTTTGAGCTACACAGAAGGAATCAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGTTCAGTTTCTAACAAATTTCATGAAGGAAGCTTGACCTAAATCGAATGGGAAGTTGATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGCATTCTGGGGTGTACAAGTTGACTCCGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTATCTACAACTTTCATGAAGAATTCGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGAAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCCCATTTTTATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGATTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTGTGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTAGACGTTTTATATGCTTTACCATGAATGATATATGATTTTTATGAACGGTTTCAAGCATAAATTTTGAGCTCAGATTTTCTAACGAGGTTTATATACGAGCACGTGGCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTACTTCTAAACGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGTTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGACTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGATTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAGAACGTTTGATGTACTTGATATGCCTTGCTACATTTTTTAATGACGAACTTGCGAGATATTTTAGCAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACATGTTTGACTTCCGGATTTAGAGTTTTAAAGTTTGTCACTCACTGGGCTTCGTAGCTCATCCTTTCAATTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTACAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATGTCTATGATTAGTATGTTTATCAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCATGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAG

mRNA sequence

ATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAAGGGAGCACTTTAAGGAGAGAGTGAAGGAAGAAGGAGAAGATGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGAAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGCGTTCAACCTGGCAACCTCTGGTTTTTTAGTCGGTTTGAGCTACACAGAAGGAATCAAGAGCATTCTGGGGTGTACAAGTTGACTCCGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGATTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTGTGGGTGTTGGAAGTTAGGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCATGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAG

Coding sequence (CDS)

ATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAAGGGAGCACTTTAAGGAGAGAGTGAAGGAAGAAGGAGAAGATGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGAAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGCGTTCAACCTGGCAACCTCTGGTTTTTTAGTCGGTTTGAGCTACACAGAAGGAATCAAGAGCATTCTGGGGTGTACAAGTTGACTCCGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGATTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTGTGGGTGTTGGAAGTTAGGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAGCGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCATGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAG

Protein sequence

MSGLHHVYVERFSVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGREHFKERVKEEGEDEFRGLRLKKIGKSSCKASHCRICVQPGNLWFFSRFELHRRNQEHSGVYKLTPKLYLVSCRVFENEDFDVYFINFGSVLRKLWVLEVRVEIELPVPDTLPTSAESSRSSSSYFPNQVMSGLHHVYVERFSVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT

Homology

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BLAST of Spg015576 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-23
Identity = 99/262 (37.79%), Postives = 120/262 (45.80%), Query Frame = 0


Query: 45  EHFKERVKEEGEDEFRGLRLKKIGKSSCKASHCRI-----CVQPGNLWFFSR----FELH 104
           EHF+ERVKEE E+EFRGLRLKKIGKSSCKA+HCRI       +P     FS      E+ 
Sbjct: 74  EHFEERVKEE-EEEFRGLRLKKIGKSSCKANHCRIWSTGFSSKPRGFLVFSDALSILEVQ 133

Query: 105 RRNQE--------HSGVYKLTP----------------------------KLYLVSC--- 164
           + NQ+         SG + + P                            +LY   C   
Sbjct: 134 KSNQKLYWDIESGKSGKWDVMPRGNRSSLQTGQLDKIEISIDYMTEILSLRLYGTVCPQV 193

Query: 165 -------RVFENED---------------------FDVYFINFGSVLRKLWVLEVRVEIE 221
                   V  + D                     + V  +N G   R L  ++  +EIE
Sbjct: 194 IFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIE 253

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BLAST of Spg015576 vs. NCBI nr
Match: TYK11725.1 (uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 118.2 bits (295), Expect = 8.7e-23
Identity = 76/158 (48.10%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 104 VYKLTPKLYLVSCRVFENEDFDVYFINFGSVLRKLWVLEVR------------------- 163
           V+K   KLYLVSCRV ENEDF VYFIN G VLRKLWVLEVR                   
Sbjct: 12  VHKSYQKLYLVSCRVSENEDFYVYFINCGYVLRKLWVLEVRISNLENLKMPRGNRPSLQT 71

Query: 164 -----------------------VEIELPVPDTLPTSAESSRSSSSYFPNQVMSGLHHVY 220
                                  VEIELPVPDTLPT          Y P+ V +  +  +
Sbjct: 72  GELDKTVIFLLSTLSVLCDNDAVVEIELPVPDTLPT--------LFYKPSDVRAASYVCW 131

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BLAST of Spg015576 vs. NCBI nr
Match: TYK01041.1 (uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-22
Identity = 60/75 (80.00%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 145 VEIELPVPDTLPTSAESSRSSSSYFPNQVMSGLHHVYVERFSVSVGSTGIVRGDDVCWLH 204
           VEIELPVPDTLPTS ESS S+SSYF NQVMSGLH V    F++SV STGIVRGDDVCWLH
Sbjct: 34  VEIELPVPDTLPTSTESSESNSSYFTNQVMSGLHLV----FNISVESTGIVRGDDVCWLH 93

Query: 205 AVFRAKLAGGPGGGV 220
           AVFRAK  GGP GGV
Sbjct: 94  AVFRAKTTGGPRGGV 104

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BLAST of Spg015576 vs. NCBI nr
Match: KAA0064296.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01032.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-22
Identity = 62/76 (81.58%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 145 VEIELPVPDTLPTSAESSRSSSSYFPNQVMSGLHHVYVERFSVSVGSTGIVRGDDVCWLH 204
           VEIEL VPDTLPTSAES  S+SSYF NQVMSGLH V    F+VSVGSTGIVRGDDVC LH
Sbjct: 588 VEIELSVPDTLPTSAESYGSNSSYFTNQVMSGLHLV----FNVSVGSTGIVRGDDVCCLH 647

Query: 205 AVFRAKLAGGPGGGVT 221
            VFRAK AGGPGGGVT
Sbjct: 648 VVFRAKTAGGPGGGVT 659

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BLAST of Spg015576 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-21
Identity = 73/139 (52.52%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 104 VYKLTPKLYL------VSCRVFENEDFDVYFINFGSVLRKLWVLEVRVEIELPVPDTLPT 163
           ++KL  KLYL      +S +  E +   ++ ++  SVLR     +    IELPVPDTLPT
Sbjct: 52  IHKLNQKLYLGPRGNRLSLQTGELDKTVIFSLSTLSVLR-----DNNAVIELPVPDTLPT 111

Query: 164 SAESSRSSSS----------------YFPNQVMSGLHHVYVERFSVSVGSTGIVRGDDVC 221
           SAESS S+SS                 F NQVMS LH V    F+VSVGSTGIVRGDDVC
Sbjct: 112 SAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLV----FNVSVGSTGIVRGDDVC 171

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BLAST of Spg015576 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.5e-24
Identity = 99/262 (37.79%), Postives = 120/262 (45.80%), Query Frame = 0


Query: 45  EHFKERVKEEGEDEFRGLRLKKIGKSSCKASHCRI-----CVQPGNLWFFSR----FELH 104
           EHF+ERVKEE E+EFRGLRLKKIGKSSCKA+HCRI       +P     FS      E+ 
Sbjct: 74  EHFEERVKEE-EEEFRGLRLKKIGKSSCKANHCRIWSTGFSSKPRGFLVFSDALSILEVQ 133

Query: 105 RRNQE--------HSGVYKLTP----------------------------KLYLVSC--- 164
           + NQ+         SG + + P                            +LY   C   
Sbjct: 134 KSNQKLYWDIESGKSGKWDVMPRGNRSSLQTGQLDKIEISIDYMTEILSLRLYGTVCPQV 193

Query: 165 -------RVFENED---------------------FDVYFINFGSVLRKLWVLEVRVEIE 221
                   V  + D                     + V  +N G   R L  ++  +EIE
Sbjct: 194 IFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIE 253

[Close]

BLAST of Spg015576 vs. ExPASy TrEMBL
Match: A0A5D3CJL4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00370 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-23
Identity = 76/158 (48.10%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 104 VYKLTPKLYLVSCRVFENEDFDVYFINFGSVLRKLWVLEVR------------------- 163
           V+K   KLYLVSCRV ENEDF VYFIN G VLRKLWVLEVR                   
Sbjct: 12  VHKSYQKLYLVSCRVSENEDFYVYFINCGYVLRKLWVLEVRISNLENLKMPRGNRPSLQT 71

Query: 164 -----------------------VEIELPVPDTLPTSAESSRSSSSYFPNQVMSGLHHVY 220
                                  VEIELPVPDTLPT          Y P+ V +  +  +
Sbjct: 72  GELDKTVIFLLSTLSVLCDNDAVVEIELPVPDTLPT--------LFYKPSDVRAASYVCW 131

[Close]

BLAST of Spg015576 vs. ExPASy TrEMBL
Match: A0A5D3BMJ4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00470 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.2e-23
Identity = 60/75 (80.00%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 145 VEIELPVPDTLPTSAESSRSSSSYFPNQVMSGLHHVYVERFSVSVGSTGIVRGDDVCWLH 204
           VEIELPVPDTLPTS ESS S+SSYF NQVMSGLH V    F++SV STGIVRGDDVCWLH
Sbjct: 34  VEIELPVPDTLPTSTESSESNSSYFTNQVMSGLHLV----FNISVESTGIVRGDDVCWLH 93

Query: 205 AVFRAKLAGGPGGGV 220
           AVFRAK  GGP GGV
Sbjct: 94  AVFRAKTTGGPRGGV 104

[Close]

BLAST of Spg015576 vs. ExPASy TrEMBL
Match: A0A5A7VD33 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00370 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-22
Identity = 62/76 (81.58%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 145 VEIELPVPDTLPTSAESSRSSSSYFPNQVMSGLHHVYVERFSVSVGSTGIVRGDDVCWLH 204
           VEIEL VPDTLPTSAES  S+SSYF NQVMSGLH V    F+VSVGSTGIVRGDDVC LH
Sbjct: 588 VEIELSVPDTLPTSAESYGSNSSYFTNQVMSGLHLV----FNVSVGSTGIVRGDDVCCLH 647

Query: 205 AVFRAKLAGGPGGGVT 221
            VFRAK AGGPGGGVT
Sbjct: 648 VVFRAKTAGGPGGGVT 659

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BLAST of Spg015576 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-21
Identity = 73/139 (52.52%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 104 VYKLTPKLYL------VSCRVFENEDFDVYFINFGSVLRKLWVLEVRVEIELPVPDTLPT 163
           ++KL  KLYL      +S +  E +   ++ ++  SVLR     +    IELPVPDTLPT
Sbjct: 52  IHKLNQKLYLGPRGNRLSLQTGELDKTVIFSLSTLSVLR-----DNNAVIELPVPDTLPT 111

Query: 164 SAESSRSSSS----------------YFPNQVMSGLHHVYVERFSVSVGSTGIVRGDDVC 221
           SAESS S+SS                 F NQVMS LH V    F+VSVGSTGIVRGDDVC
Sbjct: 112 SAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLV----FNVSVGSTGIVRGDDVC 171

The following BLAST results are available for this feature:

BLAST of Spg015576 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08801.1	1.8e-23	37.79	hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]	[more]
TYK11725.1	8.7e-23	48.10	uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa]	[more]
TYK01041.1	1.5e-22	80.00	uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa]	[more]
KAA0064296.1	3.3e-22	81.58	putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK...	[more]
TYK11835.1	2.8e-21	52.52	uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]	[more]

BLAST of Spg015576 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAC6	8.5e-24	37.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CJL4	4.2e-23	48.10	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BMJ4	7.2e-23	80.00	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7VD33	1.6e-22	81.58	Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A5D3CJX3	1.4e-21	52.52	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Spg015576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015576.1	Spg015576.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity