Spg015546 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015546
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 12265603 .. 12268393 (+)
RNA-Seq Expression	Spg015546
Synteny	Spg015546

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCCAAGATGTGGCCGCAACTGGGCTTTCATACAGAATACCGACATTTGTGGGATCTTCACAGAATCATCTGAAAATCCCCAATCCAGCATCAAATCTCTGAAGATGGCGAATTCTTACCTTCCAAGGCCCTCTCACACTGATCTCGGCAGCCAACCTTACCTTCCAATGTCTATAAAAGGGGACCAAGGTGCAAGAAGAAAAGAGAGCTCGGTGCTTGGAGTTTTCGTCCTTAGGATTTAATTCTTTTGTTTCTCTCTTCTCACCTTGTAACCACTCTGAGTTACGGATCCCTCAGTCTTTGCCGGCTCTTTTATTCGAAAGAAGAAGAAGAGAAAGACTTGTCTATCCTTGTAAAAGGGCAAGAGCTAGCTAGATAGAGAGAGAGAGATTCTTAGTAGAGTCTTGTCTTTATTCTTTGTTTTGCACTCTTTAATTTCTAGCAATTTGTTGTTGCTTTTCATTTACTTTTTGTTGTAAGTTAATCTTTTGTACTCAGCTGATTCTTTAATTTTAATTCCAGTTATCTTTTCTCCATGTCGAGTTTGCTTTTCGTTATGTTTTGCAATTTATTTTCAATCATGAGCTAAGCTTCTATTTAGGGGTTCAAATATGTGGATTCCTTGAATAGAAGAAAGCTCCGCCTATGCAAAAGCAACCCTTCTCCCTCTAGCATTGTTTTTTTTTTTTGTTGAAATTAAGGTTTAAATGTTAACTTAAACCAATCACTTAGGTTGGCATAGTTTTCATTTAGCTGATGGCCGAAAGGTTGGAGTTGAAGGCACGCGTTCGCAAAACAATGGTGGAAAAGATCCTTGAAATAGGACTTTGACTTCTTACATCCTAGAAATAGGACTGGAACCACTAGGGTTTTAAGAGTCGTGAGTATTATTTATCTAAGTTTCAACTAGCCCTAGAAATAGATATCTAGTTGGCTTAGTCTTCTAAAGGCACCTACAGCGGAGCTGAATAGGAGTTGGACTTAACTCACAATCTGGTTGTCAGGGAATTGCAGGTGCAACTGGGATATGATATTTGCACCATGTCTATGTGGGCAACATAGATAGTGTTTCTCAGTCGTGTGCAATGCCTGAGTAAATTTCGGGCACATAGGTAAGGGTAATCTAAAGCTCAAGGTTGAAACTATTTGAATTTCCCTGTTTATCTCATAGATTTCTTTGTCTGTCTTTAATTCCTTGTTTCTTACTTTTGTCTTAAACCAAAACCCCATTCAAACTATTTTTCTTGGTTACCAATCGTGGCCGCAAATTTAGAGGAGGTTCATATTTTACAGAATCATGTGTTAACTTAGCTAGTCAGCATCTCCCATAAGTACAATATCTGGAATCCTTTCCACTTTATTACTTGATAGTGTATACTTGCACTCGAGCAAGTTGTTGCGCAATATCAACATGACACACACCAACCATCCCTTCATGCCTTGACACCTGGTGTGTGCGCAACTTTCATTTTTTTCTGTTTTTTTTTTCTTTTTACTTTTCAGCATTTGTTTCTTTTTTAAAATACACCAATATTTTTTTTTCACTCACTAAAAGAGAAATTAGAGAGAGCAAAGTAGGGAGAAAAGAGAGAGCAAATGAATTCTTCTCATTCAATTGTGTAATAAATACTTCATACAACCTCTATTTTTACTAATGCAATAAGACTTAAAATATAATGGAGAGATTCTCGTGACTATTCCTATGGGAGAGGGATAGTCATGGGGAAGATAGTTGTTATAGGTGAAGATTATCTTCAACCCGATTGCATCAAAAACCCGGAGGTAGCAGGCCTGACTCTCGTAAGGTGGTCCATCACAAGTGAAGGAAAAGGGAGGCCCGAGGCCCACTCGCGAACCATCTTGGTGTCAGCCCCAAGTCGAGGTCGAGGAGGTGGTCGACCTCGATCCATTGCCGGGGCGACCAGGTGAGATGGCTTGGGCCCACTTTGGGGCAGCCCAGTTTCATCCCTCTGGGCTTTGGAGAAACCCTATCAAGGAGAAAAAGTATAAATACACATCGAAGCAACCTAGGAAAAGGATCTAGAAAAAACAGGTATGTCTCTTTCATTCCCTGGCTACACTTGTTGTTTCTCTTCCAGTGAAACTGACTTAAGCATCAGAGTGTGTGTGGCTAGCACCACACCAGTGTGCAGCATTTTCTCGTCTTGCAAATCACGTCTTCCCCCTTTTTCACAAATTCGCTGTTGGTGCCACGTGAAGTTAGGCTAACCGCCTGGCCAAATCTAACTATCAACAGTTCGCACTGTCTGTGGGAAAGAGTGCTGACCGGTAAACGTTGTACATTGAAAGCAGGACCATGAGTGGTGGAATGGAGCAAGGGAAATTAGTGCGTAGACAGACCATGGAGAAGGAAGCGATCCTCGACCACGACTCCAGGTGCAGGAAGCTAAGATTGTTGCCTTGAGAGGAACGGTGAATGATATGGGACAGAGTTTGGCCGAGATCTTAGATATTCTGAAGAAATCAAATCCAAGCTTGAGGAATCCAAAGGACCAGCCAGCTCGAGATCCCAAGAAAGAAAAGGGAGCTCTGATGGAGGAAATGGGAGATTCAGAGAGCATCACAAGCAAGATGCCTAATTTGAATCTGGCTGGCGACTTAGCCCTAAGAGATCTCGGGCCGAGCGACAAAGGGGCTCGCAAGAGTGCACTTGCCACAAGATACGGGGAAAGCACGTTGGGGACAGATTTGCGTGGCAGGGCCGAGGAGGAGCATCAGATTGCCCGAGCTAGGCTAAGGTTGAGGTCGAGGCCAAGGCAAAGATGA

mRNA sequence

ATGCGCCCAAGATGTGGCCGCAACTGGGCTTTCATACAGAATACCGACATTTGTGGGATCTTCACAGAATCATCTGAAAATCCCCAATCCAGCATCAAATCTCTGAAGATGGCGAATTCTTACCTTCCAAGGCCCTCTCACACTGATCTCGGCAGCCAACCTTACCTTCCAATGTCTATAAAAGGGGACCAAGGGATAGTCATGGGGAAGATAGTTGTTATAGGTGAAGATTATCTTCAACCCGATTGCATCAAAAACCCGGAGGTAGCAGGCCTGACTCTCGTAAGGTGGTCCATCACAAGTGAAGGAAAAGGGAGGCCCGAGGCCCACTCGCGAACCATCTTGGTGTCAGCCCCAAGTCGAGGTCGAGGAGGTGGTCGACCTCGATCCATTGCCGGGGCGACCAGGACCATGAGTGGTGGAATGGAGCAAGGGAAATTAGTGCGTAGACAGACCATGGAGAAGGAAGCGATCCTCGACCACGACTCCAGCTTGAGGAATCCAAAGGACCAGCCAGCTCGAGATCCCAAGAAAGAAAAGGGAGCTCTGATGGAGGAAATGGGAGATTCAGAGAGCATCACAAGCAAGATGCCTAATTTGAATCTGGCTGGCGACTTAGCCCTAAGAGATCTCGGGCCGAGCGACAAAGGGGCTCGCAAGAGTGCACTTGCCACAAGATACGGGGAAAGCACGTTGGGGACAGATTTGCGTGGCAGGGCCGAGGAGGAGCATCAGATTGCCCGAGCTAGGCTAAGGTTGAGGTCGAGGCCAAGGCAAAGATGA

Coding sequence (CDS)

ATGCGCCCAAGATGTGGCCGCAACTGGGCTTTCATACAGAATACCGACATTTGTGGGATCTTCACAGAATCATCTGAAAATCCCCAATCCAGCATCAAATCTCTGAAGATGGCGAATTCTTACCTTCCAAGGCCCTCTCACACTGATCTCGGCAGCCAACCTTACCTTCCAATGTCTATAAAAGGGGACCAAGGGATAGTCATGGGGAAGATAGTTGTTATAGGTGAAGATTATCTTCAACCCGATTGCATCAAAAACCCGGAGGTAGCAGGCCTGACTCTCGTAAGGTGGTCCATCACAAGTGAAGGAAAAGGGAGGCCCGAGGCCCACTCGCGAACCATCTTGGTGTCAGCCCCAAGTCGAGGTCGAGGAGGTGGTCGACCTCGATCCATTGCCGGGGCGACCAGGACCATGAGTGGTGGAATGGAGCAAGGGAAATTAGTGCGTAGACAGACCATGGAGAAGGAAGCGATCCTCGACCACGACTCCAGCTTGAGGAATCCAAAGGACCAGCCAGCTCGAGATCCCAAGAAAGAAAAGGGAGCTCTGATGGAGGAAATGGGAGATTCAGAGAGCATCACAAGCAAGATGCCTAATTTGAATCTGGCTGGCGACTTAGCCCTAAGAGATCTCGGGCCGAGCGACAAAGGGGCTCGCAAGAGTGCACTTGCCACAAGATACGGGGAAAGCACGTTGGGGACAGATTTGCGTGGCAGGGCCGAGGAGGAGCATCAGATTGCCCGAGCTAGGCTAAGGTTGAGGTCGAGGCCAAGGCAAAGATGA

Protein sequence

MRPRCGRNWAFIQNTDICGIFTESSENPQSSIKSLKMANSYLPRPSHTDLGSQPYLPMSIKGDQGIVMGKIVVIGEDYLQPDCIKNPEVAGLTLVRWSITSEGKGRPEAHSRTILVSAPSRGRGGGRPRSIAGATRTMSGGMEQGKLVRRQTMEKEAILDHDSSLRNPKDQPARDPKKEKGALMEEMGDSESITSKMPNLNLAGDLALRDLGPSDKGARKSALATRYGESTLGTDLRGRAEEEHQIARARLRLRSRPRQR

Homology

The following BLAST results are available for this feature:

BLAST of Spg015546 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015546 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015546 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015546 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015546.1	Spg015546.1	mRNA