Spg015518 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015518
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold10: 12960111 .. 12964093 (-)
RNA-Seq Expression	Spg015518
Synteny	Spg015518

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCATAATTTGTCCAAGATACTTAGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCAAGGAAAGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACAAGATCGAAGGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACAGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACCCTTAAGGGACGTGATTACACAGTTTCTACCCCAAGCTACAGTCATACTAAGACAGACTTGAGGAATCTGATCGAGGAGAAGCGAAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCTAGGGCTGCCGAGGCCGAGGCCAAGAAGGACAAACTCCCTTGGAAGACTGAGCTTCTAAACGCACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAAGGACCTTGAAGACCAAGACTTGGAAGAACTAGTCGATCAAGTCGACCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCAAACTATATGATGGCAAGAAAAACCCCGTGCAGCAGCTAAACACCTGCAAAAACTGGATGGACTTCCATGGTGTCTCTGACGCAATCAGGTGTCGCGCATTCTTTTTCACTCTGACAGGATCAGCCAAGCACTGGTTTGAAAGATTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCTCGAGCGTTCCTCGCACAGTTTATGGGGGCCAGAGAGCAGCGCAAGCCTCACATCAACCTCTTAACATTCAAACAACAGCCAGGTGAGAGCTTGCGGGATTACATAACACGTTTCAACGACGAAGCACTGTAGGTTGAGGGATACAGTGAGGGAGCAGCCCTGGTAGCCATCATAGCCGAGTTGGAAGACGAAAGACTTCTCAATTGAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTCGTCTCCTGAGCACAGAAGTACATGAGCGCAGAGGAGTTACTGAAATAAAAAAGGTCAGGACAAGAGAACAAGAGACATTCTTCAGTCGATCAGGAAAGAAAGAAAGATATGAGACAGCGGACAGACGATGGTGGCCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTTCGGTAAGTTCGAGAAATACACACCAACTACCGTTCCACAAGAACAAGTTTTGATGGAGATTCGAAACACGGGCCTTCTAAAGTTTCCTGGAAGGATGAAGTCGAATCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGATCCAGAGTGGGTATCTGAAGGAGTTCGTCGGCGAGCCCGTGGCCGAGGCCGACCAGGGATGGTCGAGGCCGAGGCAGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGAGGGATCAAAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGACACACCCCCTTTGGAGTTCACTAAGGCTGAGGCAGCGAGCATTCATCAGCCACATAATGATGCCCTGGTGGTCACTCTAATTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAACGGCCTTTAAAGCAATGCAGTTAGAGAGCAAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCTAGAAGGTAGCATAGAACTTCCTGTGACCTTTAGGGATGGACAGAATGCAATGGCAAAGATGATAAACTTCCTAGTTGTGGATTGTATATCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAAATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTGTGAAAGGAGAGCAGAAGGCATCACGAGAATGTTACTAGACCGCGTTGAAAGCAGTTAAGCCACAGAGGCCCGAGGCCGACCAGAGGATGGGCCGAGGCCGAGCAGAGCACACTTCCACCAAGTCTGAATCTGAACTTATGGAGTTCTAGGGCTTCTTGTTTATTGCATTTTATCATGTAATTAGACATTATCTATGTTGTTTCTGCCTCTAGTATAGGTCGAGTACTTTTCCTTATTTGGTTACATTCAAGTGTAAAAGTTCAATTAATGTAAAAGCCCTATTAATTCACCATTAAAGTTCAGTATTCAGGAGTGTGCACAAGGCAACCGATTCAAGCATCACGAAACGCGAGCTTGGACCGCCGAGTCTACCTCGCCCCATCGACTTGAGACAATGTGAGCCTGGACCTCGGGTCTACCTCACGAGCCATCATTTCATGCGAGCCTGGACTGCCGAGTCTACCTCGCCTCATCCAGACTTGAGACCACGTGAGCCTGGACCACCGAGTCTACCTCACCTCATCTGGCTTGAGCATCTTCACACCATGTGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGCCTGGACCACCGAGTCTACCTCACCTCATCTGGCTTGAGCCCATCACTTCCCGCGAGCCTGGACCCCTGGGTCTACCTCGCCTCATCCAGACTTGAGGTTACGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGCTTCTTCATATCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGACTATGTGAGCCTGGACTACCGAGTCTACCTCACTTCATCTGGCCTAAGCGTTTTCATGTCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCATATGCGAGATTGCATGAGCCTGGACCACCAAGTCTACCTCATCTGAGTCAAGCTCACCTGGCAGAAGTAGAAACTGAGCACCTCTTGCAAGGGCCGAACACAAACTTTAAAGGTATTCTCCTATCTACTCAACTATACTTGACGTTTCAGTGAAGTTTTATTTAAAATTGGGGGCTACAAAGGGGATATGCACTCCCTATTAAACAAAAAGCAAGTAACAGGGATATGCACTCCCTATTAAACAAAAAACACACTAGCATGTCTAACCAGTGATCACATGCTCTAGCCTATTCTTTCACTATTTTCCTACAAGGACTAACGTATGAATGCAGGGAGCTAAGTTTTAGGCTAACAAGGGCATGAGGCTGAGGCCGACCCTAGCCTATTTCTTTTGCAGAGTTTAACTTTTCGATGCAGGATCGTGAAATCCTTTGATCTTCTTATTTCTACTTGTGGATAAGCCCTTGATCTGGAATGATGCACTCCGAATGACCAAGCAAAATTAGAAAAATGCTCGGCCTCAGGAAGAGGTCGAGGCCGACTAGACAAGCTAAAAGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGAGGCCGACCAGCACCATTTTTGTAATCCCTCACCTTTTTCATCTCCATTTCACCTAACCCCTATTCAGGGAGCGTCTACTTCTATCCTATTTTGCAGGATGACAACAAAGCTGCACATAGGTCAGCGCAAAGACCAAGATCAGTACTCTTAAACCGGGCTTAAGGAGCTCGGCCTATGGCAGTAAGTCGCACCTGAATCCCAATTCAAGAGTGGGGGCTTAATGTTATAGGTAATTTCGGACCACCCCGTTGCACAAGCAGCTGACGAGGACATCCGGGTGGAAATAGGACTAGGAGACCGAGCCGAAGGAAGAACCGACCAAAGGGCCGGGCCAAATTGGCCCGACCCATATGGTCGGCCTCGACCTAAGGTAGAAGCCGAGCATTATGTTCGGCCCGCGCAAGCTCGGTCGCCTCCTCCCGGTCACAAATGCCTCTAG

mRNA sequence

ATGGATCATAATTTGTCCAAGATACTTAGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCAAGGAAAGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACAAGATCGAAGGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACAGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACCCTTAAGGGACGTGATTACACAGTTTCTACCCCAAGCTACAGTCATACTAAGACAGACTTGAGGAATCTGATCGAGGAGAAGCGAAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCTAGGGCTGCCGAGGCCGAGGCCAAGAAGGACAAACTCCCTTGGAAGACTGAGCTTCTAAACGCACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAAGGACCTTGAAGACCAAGACTTGGAAGAACTAGTCGATCAAGTCGACCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGAAAGAAAGAAAGATATGAGACAGCGGACAGACGATGGTGGCCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTTCGGTAAGTTCGAGAAATACACACCAACTACCGTTCCACAAGAACAAGTTTTGATGGAGATTCGAAACACGGGCCTTCTAAAGTTTCCTGGAAGGATGAAGTCGAATCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGATCCAGAGTGGGTATCTGAAGGAGTTCGTCGGCGAGCCCGTGGCCGAGGCCGACCAGGGATGGTCGAGGCCGAGGCAGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGAGGGATCAAAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAATATCGAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAACGGCCTTTAAAGCAATGCAGTTAGAGAGCAAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCTAGAAGGTAGCATAGAACTTCCTGTGACCTTTAGGGATGGACAGAATGCAATGGCAAAGATGATAAACTTCCTAGTTGTGGATTGTATATCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAAATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTGTGAAAGGAGAGCAGAAGGCATCACGAGAATTATTCAGGAGTGTGCACAAGGCAACCGATTCAAGCATCACGAAACGCGAGCTTGGACCGCCGAGTCTACCTCGCCCCATCGACTTGAGACAATGTGAGCCTGGACCTCGGGTCTACCTCACGAGCCATCATTTCATGCGAGCCTGGACTGCCGAGTCTACCTCGCCTCATCCAGACTTGAGACCACGTGAGCCTGGACCACCGAGTCTACCTCACCTCATCTGGCTTGAGCATCTTCACACCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCATATGCGAGATTGCATGAGCCTGGACCACCAAGTCTACCTCATCTGAGTCAAGCTCACCTGGCAGAAGTAGAAACTGAGCACCTCTTGCAAGGGCCGAACACAAACTTTAAAGGGAGCGTCTACTTCTATCCTATTTTGCAGGATGACAACAAAGCTGCACATAGGTCAGCGCAAAGACCAAGATCAGTAATTTCGGACCACCCCGTTGCACAAGCAGCTGACGAGGACATCCGGGTGGAAATAGGACTAGGAGACCGAGCCGAAGGAAGAACCGACCAAAGGGCCGGGCCAAATTGGCCCGACCCATATGGTCGGCCTCGACCTAAGGTAGAAGCCGAGCATTATGTTCGGCCCGCGCAAGCTCGGTCGCCTCCTCCCGGTCACAAATGCCTCTAG

Coding sequence (CDS)

ATGGATCATAATTTGTCCAAGATACTTAGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCAAGGAAAGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACAAGATCGAAGGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACAGATCGTACAATTTTGAGGAGCCCAGAGTCAAGCACCCTTAAGGGACGTGATTACACAGTTTCTACCCCAAGCTACAGTCATACTAAGACAGACTTGAGGAATCTGATCGAGGAGAAGCGAAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCTAGGGCTGCCGAGGCCGAGGCCAAGAAGGACAAACTCCCTTGGAAGACTGAGCTTCTAAACGCACTAAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAAGGACCTTGAAGACCAAGACTTGGAAGAACTAGTCGATCAAGTCGACCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGAAAGAAAGAAAGATATGAGACAGCGGACAGACGATGGTGGCCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCCTTCGGTAAGTTCGAGAAATACACACCAACTACCGTTCCACAAGAACAAGTTTTGATGGAGATTCGAAACACGGGCCTTCTAAAGTTTCCTGGAAGGATGAAGTCGAATCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGATCCAGAGTGGGTATCTGAAGGAGTTCGTCGGCGAGCCCGTGGCCGAGGCCGACCAGGGATGGTCGAGGCCGAGGCAGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGAGGGATCAAAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAACCAGAATATCGAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAACGGCCTTTAAAGCAATGCAGTTAGAGAGCAAACTCTTAAAGCCAAGCCTTACCCCACTTGTAGGATTTGGAGGAGAGAGAGTGACCCTAGAAGGTAGCATAGAACTTCCTGTGACCTTTAGGGATGGACAGAATGCAATGGCAAAGATGATAAACTTCCTAGTTGTGGATTGTATATCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAAATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTTGTGAAAGGAGAGCAGAAGGCATCACGAGAATTATTCAGGAGTGTGCACAAGGCAACCGATTCAAGCATCACGAAACGCGAGCTTGGACCGCCGAGTCTACCTCGCCCCATCGACTTGAGACAATGTGAGCCTGGACCTCGGGTCTACCTCACGAGCCATCATTTCATGCGAGCCTGGACTGCCGAGTCTACCTCGCCTCATCCAGACTTGAGACCACGTGAGCCTGGACCACCGAGTCTACCTCACCTCATCTGGCTTGAGCATCTTCACACCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCATATGCGAGATTGCATGAGCCTGGACCACCAAGTCTACCTCATCTGAGTCAAGCTCACCTGGCAGAAGTAGAAACTGAGCACCTCTTGCAAGGGCCGAACACAAACTTTAAAGGGAGCGTCTACTTCTATCCTATTTTGCAGGATGACAACAAAGCTGCACATAGGTCAGCGCAAAGACCAAGATCAGTAATTTCGGACCACCCCGTTGCACAAGCAGCTGACGAGGACATCCGGGTGGAAATAGGACTAGGAGACCGAGCCGAAGGAAGAACCGACCAAAGGGCCGGGCCAAATTGGCCCGACCCATATGGTCGGCCTCGACCTAAGGTAGAAGCCGAGCATTATGTTCGGCCCGCGCAAGCTCGGTCGCCTCCTCCCGGTCACAAATGCCTCTAG

Protein sequence

MDHNLSKILSILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTDSMTSKVRGLKPTDRTILRSPESSTLKGRDYTVSTPSYSHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEAKKDKLPWKTELLNALKELGNPQGDLQKSKDLEDQDLEELVDQVDPPFTEEVMKAEERKKDMRQRTDDGGRGRADHDHGRGRAHPFGKFEKYTPTTVPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQLIQSGYLKEFVGEPVAEADQGWSRPRQTKDGRDKEEPLRGIKTIFGGPAGGGSSRKRKAIAREARFEPEYRANVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTPLVGFGGERVTLEGSIELPVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKASRELFRSVHKATDSSITKRELGPPSLPRPIDLRQCEPGPRVYLTSHHFMRAWTAESTSPHPDLRPREPGPPSLPHLIWLEHLHTMRAWTTESTSPHPYARLHEPGPPSLPHLSQAHLAEVETEHLLQGPNTNFKGSVYFYPILQDDNKAAHRSAQRPRSVISDHPVAQAADEDIRVEIGLGDRAEGRTDQRAGPNWPDPYGRPRPKVEAEHYVRPAQARSPPPGHKCL

Homology

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BLAST of Spg015518 vs. NCBI nr
Match: XP_022144467.1 (uncharacterized protein LOC111014147 [Momordica charantia])

HSP 1 Score: 263.5 bits (672), Expect = 5.3e-66
Identity = 141/264 (53.41%), Postives = 178/264 (67.42%), Query Frame = 0


Query: 232 MEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQ-------LIQSGYLKEF 291
           MEI++  LLK+P RMK+   +R KS+YCLFHR HGH+T++C         LI+ GYLKE+
Sbjct: 1   MEIKDQRLLKWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 292 VGEPVAEADQGWSRPRQTKDGRDKEEPLRGIKTIFGGPAGGGSSRKRKAIAREARFEPEY 351
           V EP A           T++G   + P R I+TI GGP    S RKRKA  REAR   E 
Sbjct: 61  VEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQ 120

Query: 352 R--ANVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTPLVGFGGERVTLEGSIEL 411
              ANVK+HR+L+DGGS AD+LS TA+KAM L  K+LK S  PLVGFGGERV  EG IE 
Sbjct: 121 NEIANVKVHRVLVDGGSLADILSWTAYKAMDLGEKVLKSSPAPLVGFGGERVIPEGRIEX 180

Query: 412 PVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVV 471
           PVTF  G  ++ KM++ LVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GVG +
Sbjct: 181 PVTFGSGPKSVTKMVDXLVVNYTSSYNAILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEI 240

Query: 472 KGEQKASRELFRSVHKATDSSITK 487
           KGEQ+ SRE + +  +  D + TK
Sbjct: 241 KGEQRVSRECYYTSMRDNDRTSTK 253

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BLAST of Spg015518 vs. NCBI nr
Match: XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])

HSP 1 Score: 240.4 bits (612), Expect = 4.8e-59
Identity = 136/280 (48.57%), Postives = 174/280 (62.14%), Query Frame = 0


Query: 219 KYTPTTVPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQ---- 278
           K TPTTV  EQVLMEI++  LLK+P RMK+ P +R K QY LFHRDHGH+T++C      
Sbjct: 4   KDTPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEE 63

Query: 279 ---LIQSGYLKEFVGEPVAEADQGWSRPRQTKDG-RDKEEPLRGIKTIFGGPAGGGSSRK 338
              LI+SGYLKE+V +P A           T++G  D   P+R I+TI           +
Sbjct: 64  VEGLIRSGYLKEYVEDPKA-----------TQNGENDSNSPVREIRTIMEEQPAKLEFSE 123

Query: 339 RKAI-----AREARFEPEYRANVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTP 398
            +A        +A       AN K+HRIL+DGGSS  ++SLTA+KAM L  K LK S  P
Sbjct: 124 DEATHLFHPHNDALVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVP 183

Query: 399 LVGFGGERVTLEGSIELPVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIAS 458
           LVGFGGERV  EG IELPV F  G  ++ KM++FLVV   S+YN ILGRP +H +K I S
Sbjct: 184 LVGFGGERVIPEGRIELPVMFGSGPKSIIKMVDFLVVYYASSYNVILGRPKMHMLKEIPS 243

Query: 459 TYHQLLKFPTPNGVGVVKGEQKASRELFRSVHKATDSSIT 486
           TYHQ +KFPT +G+G +KGEQ+  RE + +  K  D + T
Sbjct: 244 TYHQSMKFPTSSGIGEIKGEQRVLRECYNASMKGNDRAST 272

[Close]

BLAST of Spg015518 vs. NCBI nr
Match: XP_022156748.1 (uncharacterized protein LOC111023587 [Momordica charantia])

HSP 1 Score: 233.4 bits (594), Expect = 5.9e-57
Identity = 132/276 (47.83%), Postives = 172/276 (62.32%), Query Frame = 0


Query: 220 YTPTTVPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQ----- 279
           YT TT+P EQVLMEI++  LLK+P RMK+   +R K +YCLFHRDH H+T++C       
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 280 --LIQSGYLKEFVGEPVAEADQGWSRPRQTKDGRDKEEPLRGIKTIFGGPAGGGSSRKRK 339
             LI+ GYLKE   E + E  +  +  R+ +  R++ E      T              +
Sbjct: 62  EGLIRRGYLKE---ERIWEKKK--ADVREARANREQNEVYHAYITDRPVTIEFSEDEATQ 121

Query: 340 AI--AREARFEPEYRANVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTPLVGFG 399
                 +A       ANVK+HRIL+DGGSSAD++S TA+KAM LE K+LK S  PLVGFG
Sbjct: 122 LFHSHNDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEKVLKSSPAPLVGFG 181

Query: 400 GERVTLEGSIELPVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIASTYHQL 459
           GERV  EG IELPVTF  G   + KM++FLVV+  S+YN ILGR T+H +K I STYHQ 
Sbjct: 182 GERVISEGRIELPVTFGSGPKGVTKMVDFLVVNYTSSYNEILGRLTMHMLKVIPSTYHQS 241

Query: 460 LKFPTPNGVGVVKGEQKASRELFRSVHKATDSSITK 487
           +KFPTP GV  +KGEQ+ SRE + +  +  D + TK
Sbjct: 242 MKFPTPGGVXEIKGEQRVSRECYYTSMRGNDRTSTK 272

[Close]

BLAST of Spg015518 vs. NCBI nr
Match: XP_022152110.1 (uncharacterized protein LOC111019899 [Momordica charantia])

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-55
Identity = 139/328 (42.38%), Postives = 187/328 (57.01%), Query Frame = 0


Query: 200 GRADH---DHGRGRAHPFGKFEKYTPTTVPQEQVLMEIRNTG---LLKFPGRMKSNPDRR 259
           GRA++   ++G  R+ P   +E++TPTT+P  ++L  I  +G   LLK P +++  P+RR
Sbjct: 71  GRAEYRRAENGPTRSRP---YERFTPTTIPISEILTNIEESGMEKLLKRPEKLRGAPERR 130

Query: 260 DKSQYCLFHRDHGHSTRNCIQ-------LIQSGYLKEFVGEP-VAEADQGWSRPRQTKDG 319
            K +YC FHR+HGH+T +  +       LIQ GY K+FVG+P  + A++   R R     
Sbjct: 131 SKDKYCRFHREHGHNTSDYWELKSQIEDLIQDGYFKKFVGKPRTSSAEKKEERKRSRTPP 190

Query: 320 RDKEEPLRGIKTIFGGPAGGGSSRKRKAIAREARFE------------------------ 379
           R  + P   I TIFGGP+GG S  KRK +AR AR E                        
Sbjct: 191 RRTDRP-AVINTIFGGPSGGQSGHKRKKLARAARREVCIIREQRPTCPITFDXADLXEVH 250

Query: 380 -PEYRA--------NVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTPLVGFGGE 439
            P   A        +V + R+L+DGG+SA++LSL  + A+      LK S TPLVGF GE
Sbjct: 251 LPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFSGE 310

Query: 440 RVTLEGSIELPVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIASTYHQLLK 481
            V  EG I+LPVT    Q  + +M  F+VVD  SAYNAI GRP +H  +AI ST HQ+LK
Sbjct: 311 SVVPEGCIDLPVTLGQDQTRVTQMAEFVVVDGRSAYNAIFGRPIIHSFRAIPSTLHQVLK 370

[Close]

BLAST of Spg015518 vs. NCBI nr
Match: XP_022150028.1 (uncharacterized protein LOC111018300 [Momordica charantia])

HSP 1 Score: 226.5 bits (576), Expect = 7.2e-55
Identity = 133/307 (43.32%), Postives = 171/307 (55.70%), Query Frame = 0


Query: 225 VPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCI-------QLIQ 284
           VP EQVLMEI+   LL++P RM +   +R K +YCLFHRDH H+T++C        +LIQ
Sbjct: 2   VPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQ 61

Query: 285 SGYLKEFVGEPVAEADQGWSRPRQTKDG-RDKEEPLRGIKTIFGGPAGGGSSRKRKAIAR 344
            GYLKE+V +P A           T++G  D + P R I+TI GGP      RKRKA  R
Sbjct: 62  RGYLKEYVEDPKA-----------TQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIR 121

Query: 345 EARFEPEYR--------------------------------------ANVKIHRILIDGG 404
           E R                                            AN K+HRIL+DGG
Sbjct: 122 ETRTSQVQHEIYHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGG 181

Query: 405 SSADVLSLTAFKAMQLESKLLKPSLTPLVGFGGERVTLEGSIELPVTFRDGQNAMAKMIN 464
           SSAD++SLTA+KAM L  +  K S   LV F GERV  EG  EL VTF  G  ++  +++
Sbjct: 182 SSADIISLTAYKAMDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSITTIMD 241

Query: 465 FLVVDCISAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKASRELFRSVHK 486
           FLV+D  S+YNAILGRPT+H +KAI STYHQ + FPT  G+G +K EQ+ SRE + +  K
Sbjct: 242 FLVIDYASSYNAILGRPTIHMLKAIPSTYHQSINFPTHGGIGEIKEEQRVSRECYYTSMK 297

[Close]

BLAST of Spg015518 vs. ExPASy TrEMBL
Match: A0A6J1CTS4 (uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014147 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-66
Identity = 141/264 (53.41%), Postives = 178/264 (67.42%), Query Frame = 0


Query: 232 MEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQ-------LIQSGYLKEF 291
           MEI++  LLK+P RMK+   +R KS+YCLFHR HGH+T++C         LI+ GYLKE+
Sbjct: 1   MEIKDQRLLKWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 292 VGEPVAEADQGWSRPRQTKDGRDKEEPLRGIKTIFGGPAGGGSSRKRKAIAREARFEPEY 351
           V EP A           T++G   + P R I+TI GGP    S RKRKA  REAR   E 
Sbjct: 61  VEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQ 120

Query: 352 R--ANVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTPLVGFGGERVTLEGSIEL 411
              ANVK+HR+L+DGGS AD+LS TA+KAM L  K+LK S  PLVGFGGERV  EG IE 
Sbjct: 121 NEIANVKVHRVLVDGGSLADILSWTAYKAMDLGEKVLKSSPAPLVGFGGERVIPEGRIEX 180

Query: 412 PVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVV 471
           PVTF  G  ++ KM++ LVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GVG +
Sbjct: 181 PVTFGSGPKSVTKMVDXLVVNYTSSYNAILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEI 240

Query: 472 KGEQKASRELFRSVHKATDSSITK 487
           KGEQ+ SRE + +  +  D + TK
Sbjct: 241 KGEQRVSRECYYTSMRDNDRTSTK 253

[Close]

BLAST of Spg015518 vs. ExPASy TrEMBL
Match: A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-59
Identity = 136/280 (48.57%), Postives = 174/280 (62.14%), Query Frame = 0


Query: 219 KYTPTTVPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQ---- 278
           K TPTTV  EQVLMEI++  LLK+P RMK+ P +R K QY LFHRDHGH+T++C      
Sbjct: 4   KDTPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEE 63

Query: 279 ---LIQSGYLKEFVGEPVAEADQGWSRPRQTKDG-RDKEEPLRGIKTIFGGPAGGGSSRK 338
              LI+SGYLKE+V +P A           T++G  D   P+R I+TI           +
Sbjct: 64  VEGLIRSGYLKEYVEDPKA-----------TQNGENDSNSPVREIRTIMEEQPAKLEFSE 123

Query: 339 RKAI-----AREARFEPEYRANVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTP 398
            +A        +A       AN K+HRIL+DGGSS  ++SLTA+KAM L  K LK S  P
Sbjct: 124 DEATHLFHPHNDALVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVP 183

Query: 399 LVGFGGERVTLEGSIELPVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIAS 458
           LVGFGGERV  EG IELPV F  G  ++ KM++FLVV   S+YN ILGRP +H +K I S
Sbjct: 184 LVGFGGERVIPEGRIELPVMFGSGPKSIIKMVDFLVVYYASSYNVILGRPKMHMLKEIPS 243

Query: 459 TYHQLLKFPTPNGVGVVKGEQKASRELFRSVHKATDSSIT 486
           TYHQ +KFPT +G+G +KGEQ+  RE + +  K  D + T
Sbjct: 244 TYHQSMKFPTSSGIGEIKGEQRVLRECYNASMKGNDRAST 272

[Close]

BLAST of Spg015518 vs. ExPASy TrEMBL
Match: A0A6J1DRG9 (uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023587 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-57
Identity = 132/276 (47.83%), Postives = 172/276 (62.32%), Query Frame = 0


Query: 220 YTPTTVPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCIQ----- 279
           YT TT+P EQVLMEI++  LLK+P RMK+   +R K +YCLFHRDH H+T++C       
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 280 --LIQSGYLKEFVGEPVAEADQGWSRPRQTKDGRDKEEPLRGIKTIFGGPAGGGSSRKRK 339
             LI+ GYLKE   E + E  +  +  R+ +  R++ E      T              +
Sbjct: 62  EGLIRRGYLKE---ERIWEKKK--ADVREARANREQNEVYHAYITDRPVTIEFSEDEATQ 121

Query: 340 AI--AREARFEPEYRANVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTPLVGFG 399
                 +A       ANVK+HRIL+DGGSSAD++S TA+KAM LE K+LK S  PLVGFG
Sbjct: 122 LFHSHNDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEKVLKSSPAPLVGFG 181

Query: 400 GERVTLEGSIELPVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIASTYHQL 459
           GERV  EG IELPVTF  G   + KM++FLVV+  S+YN ILGR T+H +K I STYHQ 
Sbjct: 182 GERVISEGRIELPVTFGSGPKGVTKMVDFLVVNYTSSYNEILGRLTMHMLKVIPSTYHQS 241

Query: 460 LKFPTPNGVGVVKGEQKASRELFRSVHKATDSSITK 487
           +KFPTP GV  +KGEQ+ SRE + +  +  D + TK
Sbjct: 242 MKFPTPGGVXEIKGEQRVSRECYYTSMRGNDRTSTK 272

[Close]

BLAST of Spg015518 vs. ExPASy TrEMBL
Match: A0A6J1DD03 (uncharacterized protein LOC111019899 OS=Momordica charantia OX=3673 GN=LOC111019899 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-55
Identity = 139/328 (42.38%), Postives = 187/328 (57.01%), Query Frame = 0


Query: 200 GRADH---DHGRGRAHPFGKFEKYTPTTVPQEQVLMEIRNTG---LLKFPGRMKSNPDRR 259
           GRA++   ++G  R+ P   +E++TPTT+P  ++L  I  +G   LLK P +++  P+RR
Sbjct: 71  GRAEYRRAENGPTRSRP---YERFTPTTIPISEILTNIEESGMEKLLKRPEKLRGAPERR 130

Query: 260 DKSQYCLFHRDHGHSTRNCIQ-------LIQSGYLKEFVGEP-VAEADQGWSRPRQTKDG 319
            K +YC FHR+HGH+T +  +       LIQ GY K+FVG+P  + A++   R R     
Sbjct: 131 SKDKYCRFHREHGHNTSDYWELKSQIEDLIQDGYFKKFVGKPRTSSAEKKEERKRSRTPP 190

Query: 320 RDKEEPLRGIKTIFGGPAGGGSSRKRKAIAREARFE------------------------ 379
           R  + P   I TIFGGP+GG S  KRK +AR AR E                        
Sbjct: 191 RRTDRP-AVINTIFGGPSGGQSGHKRKKLARAARREVCIIREQRPTCPITFDXADLXEVH 250

Query: 380 -PEYRA--------NVKIHRILIDGGSSADVLSLTAFKAMQLESKLLKPSLTPLVGFGGE 439
            P   A        +V + R+L+DGG+SA++LSL  + A+      LK S TPLVGF GE
Sbjct: 251 LPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPLVGFSGE 310

Query: 440 RVTLEGSIELPVTFRDGQNAMAKMINFLVVDCISAYNAILGRPTLHEMKAIASTYHQLLK 481
            V  EG I+LPVT    Q  + +M  F+VVD  SAYNAI GRP +H  +AI ST HQ+LK
Sbjct: 311 SVVPEGCIDLPVTLGQDQTRVTQMAEFVVVDGRSAYNAIFGRPIIHSFRAIPSTLHQVLK 370

[Close]

BLAST of Spg015518 vs. ExPASy TrEMBL
Match: A0A6J1D8C9 (uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018300 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.5e-55
Identity = 133/307 (43.32%), Postives = 171/307 (55.70%), Query Frame = 0


Query: 225 VPQEQVLMEIRNTGLLKFPGRMKSNPDRRDKSQYCLFHRDHGHSTRNCI-------QLIQ 284
           VP EQVLMEI+   LL++P RM +   +R K +YCLFHRDH H+T++C        +LIQ
Sbjct: 2   VPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQ 61

Query: 285 SGYLKEFVGEPVAEADQGWSRPRQTKDG-RDKEEPLRGIKTIFGGPAGGGSSRKRKAIAR 344
            GYLKE+V +P A           T++G  D + P R I+TI GGP      RKRKA  R
Sbjct: 62  RGYLKEYVEDPKA-----------TQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIR 121

Query: 345 EARFEPEYR--------------------------------------ANVKIHRILIDGG 404
           E R                                            AN K+HRIL+DGG
Sbjct: 122 ETRTSQVQHEIYHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGG 181

Query: 405 SSADVLSLTAFKAMQLESKLLKPSLTPLVGFGGERVTLEGSIELPVTFRDGQNAMAKMIN 464
           SSAD++SLTA+KAM L  +  K S   LV F GERV  EG  EL VTF  G  ++  +++
Sbjct: 182 SSADIISLTAYKAMDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSITTIMD 241

Query: 465 FLVVDCISAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQKASRELFRSVHK 486
           FLV+D  S+YNAILGRPT+H +KAI STYHQ + FPT  G+G +K EQ+ SRE + +  K
Sbjct: 242 FLVIDYASSYNAILGRPTIHMLKAIPSTYHQSINFPTHGGIGEIKEEQRVSRECYYTSMK 297

The following BLAST results are available for this feature:

BLAST of Spg015518 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144467.1	5.3e-66	53.41	uncharacterized protein LOC111014147 [Momordica charantia]	[more]
XP_022155873.1	4.8e-59	48.57	uncharacterized protein LOC111022886 [Momordica charantia]	[more]
XP_022156748.1	5.9e-57	47.83	uncharacterized protein LOC111023587 [Momordica charantia]	[more]
XP_022152110.1	2.5e-55	42.38	uncharacterized protein LOC111019899 [Momordica charantia]	[more]
XP_022150028.1	7.2e-55	43.32	uncharacterized protein LOC111018300 [Momordica charantia]	[more]

BLAST of Spg015518 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTS4	2.6e-66	53.41	uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DP33	2.3e-59	48.57	uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DRG9	2.8e-57	47.83	uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DD03	1.2e-55	42.38	uncharacterized protein LOC111019899 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1D8C9	3.5e-55	43.32	uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Spg015518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 648..696
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..219
None	No IPR available	PANTHER	PTHR33240:SF7	GAG-PRO-LIKE PROTEIN	coord: 332..464
None	No IPR available	PANTHER	PTHR33240	OS08G0508500 PROTEIN	coord: 332..464
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 352..438 e-value: 4.54659E-13 score: 63.5096
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 342..458 e-value: 1.6E-7 score: 33.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015518.1	Spg015518.1	mRNA