Spg015512 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015512
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase
Location	scaffold10: 13786100 .. 13794434 (-)
RNA-Seq Expression	Spg015512
Synteny	Spg015512

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCAACAGGCTACCGTTAGGAAAAGACAACTGTTGGTGACTGACCTAAGTGACCCTATCCATTCCTGGAGTTCGCGGCGTTCCGAATCCTATGATCAGGTCCTCCAAAGAGATGGTCGCTTCCAGGGTGACGAGCAGGCGGATCATAGGAATCTCACTGTGCAACCTAGGGGTGGAGACCGTAGGATACGTGGTCACGTGTCCTTCTCCCACTTACTATGAACACTTTCCCCATTCACCTTGGTATTGATGCATGCTTAATACTTTTCGAAGGGAGACCACTTCCAAGGTGACGCGAAGCCGAGCATGAATCTCACGGTTTTAACATAGGGGGACGTGAGAGAAAAACAACTCGATATGAACATCTTGTGTTTTATACTTTTCCTCCCACTGAAGTGTCTTATTTATTTTAGGGTTTATTTTGACTTAGATAAAATCTGGCTAAATGAAACTATCTAAGTCTATGCCTTATTAAATAAGGTCTTTACTCTAATGTCTATGTGAATTAAACTCTTTTAATTCCTAGTGACATTGCATGCTAATAAGACCGTGGTTAATTCAACTCAGGTTCCGGACCAGACGTCGGGAGAGTTCCCTTATAACCAAGAGTCTTATATCCTACTTAATCATATTTCAAATCTATTTAAAAAACTAAGTAGGACATTCTAATCCTATTAGAATTGTGATCTTAGGTCTAATAAAATTTTAAACCGTTTAAATTTTAACTCATTTCCTAAGATCCTATGTTAGCATGCAATTCTTTGTTATAGGTTGATGGTTTCTATTCATTAACTTTTATAACTCTTTACAATTTTAAATGAATTATCCCTATAACATGCTTCTAATGGTGATGAAAGCGTATAACAATCAAATATTCAAGTTATATAAAGCACCATTTAGAAACAACCTATATCTAGGTGTGCATAATATTAATGCTTACGATGTCTAGGTGATAAACTCATTTAAACCTTGCATCGCTCACGTATGCTCATAAAACCGGGTTAACTTAACTCAAGTACCGGCTTGATGCCCAGGTAGGAGGTGTTCCGTAAACCGTCAACTTAAATACCTTCCAGCCTTTGACAACATCTAATCGGATGAGTTCTCTTGTAACCTTAGCTTTACAAGTTATCGACCTAAAACTATTTTGCATCGATTGATCTTTGAGTTCCTTTTAACCCTAAGTGAGCATGCTTTTATATTTGTTATAGATTTTAAATGCTATCTTGGGTTTATAACGATTATAACATAAACAACCTATAACATCCATCTATGCTAAGGAGGTTTCATGCTGCATGTTTGTTCGTTCTCGTTTATTAAAAAAAATTACACTAAACGAGCTAAACAAATTTAAACATTCAACATGTATCTAATCATGAAACCTAAACATGAATTTTAATATTATAACTTAATTATAACATTCTTAATGCATGTAACATGCTTCCTATGGTGGGATTTTAAATCTATATGACATGCTTTATGCATATTTTTGGCTATTTAATTAAAACATACATCCATCCATGCATAATTAACTAAATCACCCCGAACAACTAAATTATTGCATTTAATAATTAAAAACTGCTTAAATTATCCCTATCTGGTCAGCCCGTCTGGTCAGCCCGACTGATCAACCACCTGGTCAACCCGTCTTGTCAGCCCGACTGATCAACCATCTGGTCAGCCCGTCAACCATATGTCAGCCCGAATGATCAGCCCATCAACCATCTGTCAGCCCGAATGGTCAGCCCGTCAACCATCTGTCAGCCCGAATGGTTAGCCTGACTGATCAACCATCTGGTCAGCCTGTCAACCATATGTCAGCCCGAATGATCAGCCCGTCAACCATCTGTCAGCCCGAATGGTCAGCCCGTCAACCATCTGGTTAACCTGCTGTTCTTTGGCCAGCTTGAGTTCTTCTTCTTCTTTCAATAAATTACAGTACTAAATGGACTCTAATGACTCTCAAATTTTACAGACTCGACACTAACTCATTTATGCCCATAAACATGTAGGCAATTACAAATTATTTCAACAAATTTGAGAGAATTAAATTGCCAAAACTGTAATATATCCATTCTAGCACCCAAAAAAATTCAATATGCAAATGTTACCCACCATGATCAAATTAATGCAAATTGGGTGCCCAAACCATGCTCTGATGTTAATATCACACATGCGGAAGCAATTTTGGATCTTAGGCACACAATTTGATCAATTTAATCCTTGAAGTCATGTTGTTCATAAGAACAAAAACAGAGTAATAAGGTATCTACCTCTTGAAGCTCCCAATTCGTATAATTCGATGCTTTATAATTCACACGAACGAATTTTGGGCAACCACTTGGATCTTCTCTACTATCCTCAGCCTTTGGAACGGAGTGTGGGATCCTCAATTGATAGGAATTGGAAAGGAAAGCTTATGGGTATAAACAAGCTCAAGAGTATGAAATATGGAAGTTCTTGGGAGAATTTTGGCAGCATTTTAGGTTGAGAAAATCCACTAATTTTCATCAGCTCATCCTCCATATATAGAGGAAAAGCATGCACAAGAATTGCACAAAAAATTGACAACAAATAGGGATCACTTTGAGTCACTAGATTAGGTGGTGCAATAAGGCTAATTACAAGTGATTAGTCATTAAGCACCACCTCCAAAATTTGCTAACTTTTGAATTTCTTTTAAATTCAAAATTTGCAAATAAAATTCTGAATAATCCCACTTTCTTTATTTTTATTTTAATTTAAATATCATTTATTTAATTAAAATAAAATTATTTAATTTAATATCTCATATCAAATTAATACCATTTGTGCAATCTTGGTTTCTTTCTCCCAACGAATTTTCTCGAACATGAATCCGTATTCATGTGTTTAATATTTAGATCGTATTTAAATATATAACTCTCATTTTAAGTTTAATTCATAATTAAACTAATATGTCGTTAAATATCGTATATAAGCAACTTTTGTATCCTTATCCGAATTTGAACGTTTCAAATTTTATCCTATATTCTTCCAACTTTTATTCCTATTGAGCTAGTAGAGGGACCTAATGGACCTACAGATCATGGGCTCCAACGAGATGATGATAACCAGTTAATCTCATTAACCTAGTCATTCATCGTTCCTTAGCTTTCGGGACACTCCACTATAGCCCGTAGCTACACTCCCCTCACTGTAGATATATTTCTTGTCCACTTTAGATAACCATGATTAGTAAGTCGACCATTCACCGGTTGTTCGTAACTAGAGCTAGGTCAAATGTCCGTTTTACCCCTATAGTTACATCTTGCTCCTTAAGTTCCACTGATCCTCTAATGAACAACTAGTTCGTGATACAATCACTGAACCAAGTCCCTCTCAAGGTTATGAGAGGGTGGGGCCCCTTTGTTCAAGACTTGGAGTCAGTACTTAAGGGAACAACCTCTTTACTAACCCTAAAACGGGTAGCAGTGAATTCTGTCTTGCAAAGCCATGACTCCAGCTATCTATTTAGTCTTATCCCCAAAATGGTAGGCTTATTGAGTCGACGATGTTTGACCACTCTCACCCATGCAAATCAAAGGATAATCCTAAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACTTAGGTTATATGTATGAGATGTTCAGTTTCAACAGTAAACGGTGTTGTAAAGTGAAAGTGACTTATCTCCTGGTCCGATCTCTAAGCAAACTCTTTGCATTGGACGCCCTCACTCACATGTCTTATACATGAACGATTAGGATCAGATCGTCTGTCTTTAAAGAACAAAGCGAGTCGCGCCAATAGTGTCCCCAGGATTAATGTACCCAACCTTATCCATATACTATAGATCGTTTAGACTATTTACTTGAACTTGATCCATACTTATGTCACACATAAATTTCAAGTATACATAATATAGTCATGGGTTCTTAGTTTAATGGATTTGTGCTTATATTTAGGCAAAACAAATACATAGAAATAATACTTCATTGAAGCAAGTCAAATGTTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAAGGGTGATGGTAACGATAAACCAATGTGCAACTCTTGTGGAAGACGTCATTGGGGTCCATGCCTGGCAGGAAAAGGTGTGTGTTTCAAATGTCACTAGGAAGGGCATATGGCAAATAACTTCCCTCAGAAAAAAGCAAGAGGCTTGTGAAGAAAGACCTTAGTAGTTACCTTTTTATTTACTTTGCTTGTCAAGATATGACTCTAGTTAATTGTTTTATTCCTTTAGTTTGTTTGGACTTTGTTTTTTTTTTTTAGTGTTAAGTTTGAACCATGAGATTGCAGATCATTTCCCTACTCTCCATTGCATTTGAATTAATAGAAATGAGGTGAATAAAGTATGTTTGGTTTGATGTTCCTTTTCTTCTAGTAGTAGCTATTGATTTGTGCGAGATTTGACTCGCTTTACTTGTGTATGTTGGAGCTTGTTGGTTGATCTGAGGCATTGTGAGTTGTAGTTGGGTCATTTTGCATATAGAAGTATGTTTCTCTTGTGTATTAGGATTAAGAAAAAATTTTGGGTTAACCATCTTTATGTCGTTATGTTGCCGAAATTTTCTGAGCATTCGATTAATATTAAGATAGAAGTTTAAGTAATGTCGCTAAGTTGGGTATAGAACTTGGGGCGTTACATTTACCAAGTCGGCACATTCCTTCTAAGTTTGCATGTTTACTTTGCGAATAAGTGGGCGTGACTGTGTTTAAAATTAGGAGATGAGAATCAAGTGTCTAAAGCTCTTCCAGGACCAACAACTTTCGAGGACGAAAGTTGTAAACCCGAGACTTCCCTAGGATTATTTTCTCTTGTCATATATTGTAGGAAGTTGGATTTGAGTTATTGTGGTCTCATTGGTTGGATTAAAAGTTGTTATTCATTGTTGAGGAAAAATGGCAAAGTTCTGTGGTCCTTTGTGGTTCATTGTTGGTTGAAGTTGTTGGAGCTTACTAATTTAAAAGATGAAATGGAATAAAAGTAGAAAAAGTAAAGAAAAGGAATGGAAAAAGGAAATGAAATAGGGAAATGACAAAAAAAAAAAAGAAAGGAAATGGGAAATGACAGCAAAAAACCCACCACCGCCTAAGCCAAAACTCCAGCCCATTATCAGTCAGTTCAAGCCACATTTCTCATCATTTTTCATCCAAAACTCCAAAGCTTTCGAGGGAGAGAGTGAGGGAAGAAGAAGAAGAAGATTTCCGTGGTTTTGAGGTTGAAGAAGATAGGAAATAGCTGAAGCAAAGGCAACCATAGCAGAAGCTGAGTTCAACCTGTCTACCTCTGGTTTTTGTTTCGGTTTGAGCTACACAGAAGGAACTAAGAGGTGAGGTTTGATTTTCTTGAAATTTAGTCCATTGTCTAACAAATTTAATGAAGGAAGTTTGAGCCAAATCTGATGAGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTTGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAACCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTTTCATGAAGATTTTGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGATAGATAAAGGGTAGCAGAGAACCACGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATCGGTTGGGAATCTCGTTTTCATTTCTTCGGGTAAGTTGTAGAGTGTTTGAAAATGAAGAGTTTGATATATAGGACATTAATTTTGGTTAAGTATTGGGGATGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAAGTGTGATTTTTAATTCAAGTGTTTAGAATTCATGAGCATGGAAGAATAAGACTATCTATGATTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAAGAAACTAGCTAAGACAGTGAGTGACAAAACGAATTTTGAAAATTGTTTCCAAACGGTTGTTCATGTTAAGATGTTTTACGTGCTTTCTATAAATGATACATGATTTCTATGAATGGTTTCAAGCATAAGTATGGGCTTAGATTTTCTAATGAGGTTTATAATTGAGCACGTGATTATTGAGTTTCTGAAAAATAGTTGAAACGACATCCTTTTAAGCCAAGCATGTATTAGCAAGAATTATTTAAAGATTTTCGGTTTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCAAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGACTGTACTCCGTGACAACGATGCTGTCGTAAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGAGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCTGTACACAACGTAGATCGGTTATGTTAGTTAAAACATTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACCTGCGATGTTTTTTAGAGCGCTTTTATCATTGCACGTTTATGTTTAATGCCTTGGTTGAACAGCTTTATACGTTTAAAGTTTTATCACGTGTTCTGATTTCCGAATGTACAGTTTTAAATTTAGTCACTCACTGGGCTTCGTAGCTCACCCTCTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGTAAATGTTTTGTAAGGATTGGATAATTTAGGTTCTAGAGGTCGTGGTTGTAAAAACCCCAGTTGAATATGTTTTTGGTTGTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGCGGCACCTCGTGTATGTTAAAAGGTTTTCAGGGATTCCGATGTGTTTTGTTTCACGTGGAATATTTTATATCTAAGATTAGTTTGTTTATCAGGTTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAAACGAGACATGGTAGTTAGTGCTAAGAAGAATCTAGGAAGTAAATAGTTAGACGTTGAGTCAGTTTAGATAGAACTAGCGGAGTACGATCCAAGTATTGTTGAGAGTGAGTCCAGTCAGGACTAAAATGTGGGTAGAAGTTTAGTATCATGCATTTGAGTTAAGTATCTATAGCATGTCTAATGTGTTGATATGATATAGGAGTCATGCCACCACGTACCAGCAGACGACGCAGGCAGAATCAGGTCGAGACGCAGGATCCTACCCAAAGTCAATCTGAAAGGGGATCCAGTACCCCAAGAGGTCAGAATGAGGCAGGGAGTGAGCGGTTTGCTAGATCTGCACAGGAGGTCGGTAGGCCAGAGAGAGCAGGGCCTAGTGATCTGGAAAAGATGTATGGGATAGAACGACTGAAGAAATTAGGAGCCTCAGTGTTTGAGGGTTCCACAGATCCAGCTGACGCCGAGGCCTGGTTAAATATGCTGGAGAAATGCTTCGACATGATGAGTTGTCCTTAGGAGCGAAAAGTCAAATTAGCTACATTCCTTTTGCAGAAGGAGGTGGAGGGATGGTGGAAATCCATTATAGCCAGGCGCGGTGATGCACGTACGTTAGACTGGCAGACATTCAGAGGTGTATTCGAGGAAAAGTACTATCCCACCACATATTGTGAGGCTAAGAGAGATGAGTTTCTGGGTCTGAAGCAAGGGTCACTTTTAGTGGTCGAGTACGAGAGAAAGTATATCGAGCTTTCACGGTATGCCGATGTGATTGTGGCATCTGAGAGTGATAGGTGTCGCAGGTTTGAGAGAGGGTTGCGGTTTATTTTTCCCAGCTAGTAGAGATTGCTTTACGTGTGGAGCAGAGTATAATAGAGGAAAAGTCGGCAGTGGAGCCTAGTCGTGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAAGTTCACACCTGGAGTGAATGTTTTAGGCCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAGTTGTCGAGGCAGATGAGTTCGGGTAGTGCTTATTAG

mRNA sequence

ATGCACCAACAGGCTACCGTTAGGAAAAGACAACTGTTGGTGACTGACCTAAGTGACCCTATCCATTCCTGGAGTTCGCGGCGTTCCGAATCCTATGATCAGGTCCTCCAAAGAGATGGTCGCTTCCAGGGTGACGAGCAGGCGGATCATAGGAATCTCACTGTGCAACCTAGGGACGTCATTGGGGTCCATGCCTGGCAGGAAAAGGAAATAGCTGAAGCAAAGGCAACCATAGCAGAAGCTGAGTTCAACCTGTCTACCTCTGGTTTTTGTTTCGGTTTGAGCTACACAGAAGGAACTAAGAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTTGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAACCTCTATTTGGTTATATTCCGTTGTTGACGTTGACTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTTCAACGTTTCAGGAGGGTCAACGGGAAAAGTCGGCAGTGGAGCCTAGTCGTGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAAGTTCACACCTGGAGTGAATGTTTTAGGCCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAGTTGTCGAGGCAGATGAGTTCGGGTAGTGCTTATTAG

Coding sequence (CDS)

ATGCACCAACAGGCTACCGTTAGGAAAAGACAACTGTTGGTGACTGACCTAAGTGACCCTATCCATTCCTGGAGTTCGCGGCGTTCCGAATCCTATGATCAGGTCCTCCAAAGAGATGGTCGCTTCCAGGGTGACGAGCAGGCGGATCATAGGAATCTCACTGTGCAACCTAGGGACGTCATTGGGGTCCATGCCTGGCAGGAAAAGGAAATAGCTGAAGCAAAGGCAACCATAGCAGAAGCTGAGTTCAACCTGTCTACCTCTGGTTTTTGTTTCGGTTTGAGCTACACAGAAGGAACTAAGAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTTGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAACCTCTATTTGGTTATATTCCGTTGTTGACGTTGACTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTTCAACGTTTCAGGAGGGTCAACGGGAAAAGTCGGCAGTGGAGCCTAGTCGTGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAAGTTCACACCTGGAGTGAATGTTTTAGGCCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAGTTGTCGAGGCAGATGAGTTCGGGTAGTGCTTATTAG

Protein sequence

MHQQATVRKRQLLVTDLSDPIHSWSSRRSESYDQVLQRDGRFQGDEQADHRNLTVQPRDVIGVHAWQEKEIAEAKATIAEAEFNLSTSGFCFGLSYTEGTKRAQDFRANQEDLLFSLVFRAFWGVQVESEPLFGYIPLLTLTVLRDNDAVVEIELPVPDTLPTSAESSRTSSSSTFQEGQREKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY

Homology

[Close]

BLAST of Spg015512 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 450 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 504

[Close]

BLAST of Spg015512 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 450 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 504

[Close]

BLAST of Spg015512 vs. NCBI nr
Match: KAA0037251.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 498 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 552

[Close]

BLAST of Spg015512 vs. NCBI nr
Match: KAA0037251.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 5.3e-02
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 137 PLLTLTVLRDNDAVVEIELPVPDTLPTSAESSRTSSSS 175
           PL TL+V  DNDAVVEIELPV D LPTSAES  ++SS+
Sbjct: 237 PLSTLSVFLDNDAVVEIELPVSDALPTSAESFGSNSST 274

HSP 2 Score: 80.9 bits (198), Expect = 1.7e-11
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 349 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 403

[Close]

BLAST of Spg015512 vs. NCBI nr
Match: TYK07530.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 5.3e-02
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 137 PLLTLTVLRDNDAVVEIELPVPDTLPTSAESSRTSSSS 175
           PL TL+V  DNDAVVEIELPV D LPTSAES  ++SS+
Sbjct: 88  PLSTLSVFLDNDAVVEIELPVSDALPTSAESFGSNSST 125

HSP 2 Score: 80.5 bits (197), Expect = 2.2e-11
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 181 REKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           +EKSAVE SRG  TASGFRGREQR+FTPG+N+  RQDFK RSGGQ SR +S GS +
Sbjct: 233 KEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVF 288

[Close]

BLAST of Spg015512 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.0e-12
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 450 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 504

[Close]

BLAST of Spg015512 vs. ExPASy TrEMBL
Match: A0A5D3C867 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold702G00170 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.0e-12
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 349 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 403

[Close]

BLAST of Spg015512 vs. ExPASy TrEMBL
Match: A0A5D3C867 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold702G00170 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-02
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 137 PLLTLTVLRDNDAVVEIELPVPDTLPTSAESSRTSSSS 175
           PL TL+V  DNDAVVEIELPV D LPTSAES  ++SS+
Sbjct: 88  PLSTLSVFLDNDAVVEIELPVSDALPTSAESFGSNSST 125

HSP 2 Score: 80.9 bits (198), Expect = 8.0e-12
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 498 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 552

[Close]

BLAST of Spg015512 vs. ExPASy TrEMBL
Match: A0A5A7T6M8 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001790 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-02
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 137 PLLTLTVLRDNDAVVEIELPVPDTLPTSAESSRTSSSS 175
           PL TL+V  DNDAVVEIELPV D LPTSAES  ++SS+
Sbjct: 237 PLSTLSVFLDNDAVVEIELPVSDALPTSAESFGSNSST 274

HSP 2 Score: 80.9 bits (198), Expect = 8.0e-12
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 182 EKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           EKSA+E SRG  T SG RGREQR+FTPGVNV G QDFKRRSGG+  RQMSSGSAY
Sbjct: 450 EKSAMELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGSAY 504

[Close]

BLAST of Spg015512 vs. ExPASy TrEMBL
Match: A0A5A7SZ16 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00980 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-11
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 181 REKSAVEPSRGAPTASGFRGREQRKFTPGVNVLGRQDFKRRSGGQLSRQMSSGSAY 237
           +EKSAVE SRG  TASGFRGREQR+FTPG+N+  RQDFK RSGGQ SR +S GS +
Sbjct: 233 KEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVF 288

The following BLAST results are available for this feature:

BLAST of Spg015512 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037581.1	1.7e-11	78.18	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03091.1	1.7e-11	78.18	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037251.1	1.7e-11	78.18	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0037251.1	5.3e-02	71.05	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK07530.1	5.3e-02	71.05	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg015512 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015512 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTP3	8.0e-12	78.18	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3C867	8.0e-12	78.18	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3C867	2.6e-02	71.05	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7T6M8	2.6e-02	71.05	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SZ16	1.0e-11	71.43	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]

BLAST of Spg015512 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015512.1	Spg015512.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding