![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Spg015502 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAGGCAATTCTTCTTTCGTGCGTTTTCGTGTTGGCGTCGAGACGCCGTGGCCGACGTCTCAATTGACAGTGATTTGGGCGGTCCTCTATTTACATAGCGTCGAGACGCCGAGAGGTAGCGTCGAGACGCTACCTCTCGGGTCACCCTTGTTTGGCTGCTTCAATTTTGCTTCTTTTGACATCGTTTTCGAGTCTTGAGTGCTTCGCTTTGGTCCTTTCACCGTATTGACATCCCGTGAACTTCAAGATGGATCAAAACAACGTTAATTTTCTCCAATTGATGTCAATTTGGAATATCGGCTCCTGAGAAGCTCTAACGCCAAACATCTATAAATAATACAATTAAGCATAATAATTAACATATCAATAACCCTAATCAAATAAACTAAACATCCTAGGTTGTTAGTATGAGACTTGAACTAGTATGTGGGGACATACGGGGATCACTGTTCAAGTTACAGCCTAAAGGGTCTATAGTATAGGGGTAAGGCTTGGTACCTTATCCTGGTGACACTATGGATACGACTCACTATGTATTATGATACAAACACAATGATCTAACGCGTTCATGTAGTGGACATGCGAGTGGGGGTATCCTATGCAATGAGTTTGCATCAGACCAGACCGCGAAATAGTTAACCACTAGCTGTAACACCATTAGCTAGTTAGGTTTCTATTTCACTAGGATGACCTAGGCAACTTGGTCTCAATCCTGAGTGGGTTATGGACTCCTGTTCATGAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCTACCATTTTGGGGACAATACCGAGTGGGGAGCTGGGAACATAATCACACAAGATGGAATTCACTTCTTCCCGACTCTAGGGTAAGTAGAGGTGTGTTCCCTTAAGTGGTGTCTCCGGGTCTTGAACAATGGGCCCTGCCCTCTCAATGGCACGAGAGGGACTTCTGTTTGTAGGTTGGAACTCAAACAGGTTGTTCATTAGAGGAGAACTGGGAACTTAAGGACAAAGATGTAACCCAGGGGTAAAACGGTAATTTGACCTAGGTGGGGTTACGAACACACGTGAAGGACTGACTTGCTGTTATTGGTCGATATCCGTGGACACAGAAATATATCTACCGTGAGAAGAGTGCAGTTGTGGTTCTATAGTAGAGTGAACCACAGTTAACGAATATTGATTAACTTGGTTAATGAGTTTAGCCAATTAATCTCATATCGTTGGAGCTTTTGATCTGTAGGTCCATTAGGTCTCATCGGTAGCTCATTTAGGGCGTTGAGGTTAAATTCTAAGGGAGAATTGAATATTTGAAGGGGTTCGAATATTAAGTTTAAAATATGAATTTGATTCATATTAAAACTATAGGTTATAATTAATGTGCATTGGATGCACATTAATACTATAGGTTATATAAGAGAAATATAATTAAATATATGATATTTAATTATAACATTAATTAATTATTAAATTAATTAATCTTTTGTTTTAATTTAATTTAATTAAATCTGATTTAATTAAATTACATTAAAACTATAGGTTATATGGGAATATGATTTATATAATTAAATTAAATCAATTGTTGATTTCTTTTTCAAAAAAAAAAAAAAAAATCAATTGTTGATTTCATTAAATTAATAAAATTATTAATTTTGATTAATAATAATTTTAATTAACTTTATCAGTTTTGATAACTGATAAATCAATATTTTCCCATAACTGAAGGAGGCACCTTCAACGTGGAGGGTTTTTATGCAAGAGGTGTGATAAGGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTTCCTTGTTAAAAGTTGCATGTTTAGATCAATTTTACTATTCATGAGCTCAAAATATGTTAAAGTTGTTGAATTAAGGAGTTGAGTCACATTTGTCAAATTATGCTTATTTGTGCTTAACAAGACTCAATTTGATATGAATCTGACCCAATTTGGTGTTGTGCAGGAAAATAGAGGAAAGATGGAAATTGGTCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTTCGAGTCCTTCGCAGGTTGTTTTGAACGAGACTTTTGGCACCTAACCAGCTGTTTTGACCTCGAAAATGAATGGGCTACCTACTAGCACCTATTTCGTGGCTCCTCAACTACTCCCCACGCGATATAAACTCTTGATTCGAAGATGAATTCAAGCAGAACTCACTGGGAAGAAGAGGGTGTTGACAGAACCCTAGTAGACGCCCATGAGTAG ATGCTAGGCAATTCTTCTTTCGTGCGTTTTCGTGTTGGCGTCGAGACGCCGTGGCCGACGTCTCAATTGACAGTGATTTGGGCGGTCCTCTATTTACATAGCGTCGAGACGCCGAGAGTGCTTCGCTTTGGTCCTTTCACCGTATTGACATCCCGTGAACTTCAAGATGGATCAAAACAACTGGGTTATGGACTCCTGTTCATGAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCTACCATTTTGGGGACAATACCGAGTGGGGAGCTGGGAACATAATCACACAAGATGGAATTCACTTCTTCCCGACTCTAGGGTTGGAACTCAAACAGGTTGTTCATTAGAGGAGAACTGGGAACTTAAGGACAAAGATGTAACCCAGGGGTCCATTAGGTCTCATCGGAAAATAGAGGAAAGATGGAAATTGGTCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTTCGAGTCCTTCGCAGAACTCACTGGGAAGAAGAGGGTGTTGACAGAACCCTAGTAGACGCCCATGAGTAG ATGCTAGGCAATTCTTCTTTCGTGCGTTTTCGTGTTGGCGTCGAGACGCCGTGGCCGACGTCTCAATTGACAGTGATTTGGGCGGTCCTCTATTTACATAGCGTCGAGACGCCGAGAGTGCTTCGCTTTGGTCCTTTCACCGTATTGACATCCCGTGAACTTCAAGATGGATCAAAACAACTGGGTTATGGACTCCTGTTCATGAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCTACCATTTTGGGGACAATACCGAGTGGGGAGCTGGGAACATAATCACACAAGATGGAATTCACTTCTTCCCGACTCTAGGGTTGGAACTCAAACAGGTTGTTCATTAGAGGAGAACTGGGAACTTAAGGACAAAGATGTAACCCAGGGGTCCATTAGGTCTCATCGGAAAATAGAGGAAAGATGGAAATTGGTCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTTCGAGTCCTTCGCAGAACTCACTGGGAAGAAGAGGGTGTTGACAGAACCCTAGTAGACGCCCATGAGTAG MLGNSSFVRFRVGVETPWPTSQLTVIWAVLYLHSVETPRVLRFGPFTVLTSRELQDGSKQLGYGLLFMRDCPLICMGESGLPFWGQYRVGSWEHNHTRWNSLLPDSRVGTQTGCSLEENWELKDKDVTQGSIRSHRKIEERWKLVRNATAFLEKQRSFRVLRRTHWEEEGVDRTLVDAHE Homology
BLAST of Spg015502 vs. NCBI nr
Match: TYK05792.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 6.3e-11 Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of Spg015502 vs. NCBI nr
Match: KAA0026081.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-07 Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of Spg015502 vs. NCBI nr
Match: KAA0047821.1 (uncharacterized protein E6C27_scaffold133G00730 [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-06 Identity = 30/45 (66.67%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of Spg015502 vs. NCBI nr
Match: TYK08698.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-04 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Spg015502 vs. NCBI nr
Match: KAA0049822.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-04 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Spg015502 vs. ExPASy TrEMBL
Match: A0A5D3C3J6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002960 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.0e-11 Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of Spg015502 vs. ExPASy TrEMBL
Match: A0A5A7SPG1 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00120 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-07 Identity = 30/44 (68.18%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of Spg015502 vs. ExPASy TrEMBL
Match: A0A5A7U2P4 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00730 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 7.7e-07 Identity = 30/45 (66.67%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of Spg015502 vs. ExPASy TrEMBL
Match: A0A5A7U202 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1591G00150 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.5e-05 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Spg015502 vs. ExPASy TrEMBL
Match: A0A5D3CBX3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold118G00530 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.5e-05 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|