Spg015475 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015475
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 13653300 .. 13655190 (-)
RNA-Seq Expression	Spg015475
Synteny	Spg015475

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACTCATCTCAGTCAACTCTAATTCTAGAATAACTCATATTCCTATAGACGTTAACCACCATTGTTCGGTCAAGGACTTGTTAACACATTTAACTTATCCCCGTAAGTGTTACCCTCCCACTTTCAGATCCCAAAGGCACGTACCAACAGGCTACCGTGAGGAAAGACAACTGTTGGTAATTAGCCTAAGCGACCCTATCCTTTTCAGGAGTTCACGGTGTTCTGAATTCTATGATCTTGCCCTCCGAAGGGGTGGTTGCTCCAGGACAACACGCAGGCAGATCATAGTATTCTCACGTTGTGACCTAGGGGAGGAGACCGAGGGATACGTTGACACGTGTCCCGCTCCCACTTACTATGGGCACTTTTCCCATTCACCTTGTTATTGATCCATGCAGACACTTTTCCGAAGGGAGGCCACGCTTAAAGCGACACGAAGCCGAGCATGGACCTCACATTGTGAATATAGGGACGTAGGAGCAAAACTCGATTTAAATCAAGTTTTGTAATTTTCCTCCCACTAAAGTGACCTACGGTTCATTTTAGGGTTTATTAACTTAGATAAATCCGGCTAAGTTATTTATCTAAGTCTAGTCCTATTATAACTATTATAATAAGATCCAACGTCTAGGTGAATTAAACACATTTAATTAACCTAGCGACATTATTCTAACATTAACTTGTGATTAATTCAACTCCGGTGATCTAGGTCAGTTCCCAAGTAGGAGGTGTTTCGTATACCGTCAACTTAAATACCTCCAATCCTTAGACAGAACATCACTGGTAGAGTTCCCTTATAATCACAGGAATGTTGGTCCTACTTAGTTCATTAAAACTATTTTAAAACTAAGTAAGAATTTCTAATCCTATTAGAAAAATGACCTTAGGTCTAATTAATTTTAACTCATTTAAAATTAATTCATTTTTAACCTATGGCCCTATGTGAGCATGCATATCTTGATTATAGATTGACGGTTTCTAATCATAAATTTTAAACTATTTCAAAATTTTAATGATTAGTCCTATAATCATGCATACTATAGTTTAATTTAATTAACAATCATATTCGAATTAATAAAAATAAACTATACTATTTTGCATAGCATGAATTTTTAATATAACATTTATATTAAACTATGTATATTTCATGCTCAATGCAATGTCGTTTTCCATTTATTAAAAAATTAACAATTAATAATTGCCATAAATGGTAACTCATAGTAGCATGCTGCAAACAACCTTTTTAAATATAACTCTTTATATTTAACTAAGTAATTGCATGCATCATGGTTTTCCATTTTCATGATTTAAATATAACTCAACTATATATTAAAACACTCATGAAATTAAATCATGCATTTCAATTATATATTATAATCTAATTATAACATACATAAATGCATGAACATGTTTTATATTACCTAAGGTGGGATTATATAATTATATGACATCCATAAATCATATAAAATAGCATATGAACCGATTAATTGGCCCCTAGGATAAAATTAAAGCATAAAATTACATTAATTTTACAAAATTCTATCCTAGAAGTCTTCAGCCGCTCATAACCGGACCAAAAAAAAACTTGAAACAACCCAAAAACGTCTGAACCAGGTAAAAAAACCGCCAAACCGGTCCAAAAATTGCTGAACCAGCGCCAGAAACCCGCGAACCGGTCAACTTTCTCGGCCTGGTCAACGAACCGAGCGACCCAGACGTGAACCGCCCGCCAGACCGCTGAACCGCGTGCATTCGCCTGGACCGCTGAAGAACCGGACCGCGCCTGGCCGAACCGCACGCTTCTGCTCTGGACCGCGCCTGCTGACGTCAGCAGCGCATATGCTGACGTCAGCCCTACCCCGGACGCGTGCGAATTTCCGTCTGTAA

mRNA sequence

ATGAGACTCATCTCAGTCAACTCTAATTCTAGAATAACTCATATTCCTATAGACGTTAACCACCATTGTTCGGTCAAGGACTTGTTAACACATTTAACTTATCCCCGTAAGTGTTACCCTCCCACTTTCAGATCCCAAAGGCACGTACCAACAGGCTACCGTGAGGAAAGACAACTGTTGGTAATTAGCCTAAGCGACCCTATCCTTTTCAGGAGTTCACGGTGTTCTGAATTCTATGATCTTGCCCTCCGAAGGGGTGGTTGCTCCAGGACAACACGCAGGCAGATCATAGTATTCTCACGTTGTCAGTTCCCAAGTAGGAGGTGTTTCGTATACCGTCAACTTAAATACCTCCAATCCTTAGACAGAACATCACTGGTAGAGTTCCCTTATAATCACAGGAATGTTGGTCCTACTTACGCCAGAAACCCGCGAACCGGTCAACTTTCTCGGCCTGGTCAACGAACCGAGCGACCCAGACGTGAACCGCCCGCCAGACCGCTGAACCGCGTGCATTCGCCTGGACCGCTGAAGAACCGGACCGCGCCTGGCCGAACCGCACGCTTCTGCTCTGGACCGCGCCTGCTGACGTCAGCAGCGCATATGCTGACGTCAGCCCTACCCCGGACGCGTGCGAATTTCCGTCTGTAA

Coding sequence (CDS)

ATGAGACTCATCTCAGTCAACTCTAATTCTAGAATAACTCATATTCCTATAGACGTTAACCACCATTGTTCGGTCAAGGACTTGTTAACACATTTAACTTATCCCCGTAAGTGTTACCCTCCCACTTTCAGATCCCAAAGGCACGTACCAACAGGCTACCGTGAGGAAAGACAACTGTTGGTAATTAGCCTAAGCGACCCTATCCTTTTCAGGAGTTCACGGTGTTCTGAATTCTATGATCTTGCCCTCCGAAGGGGTGGTTGCTCCAGGACAACACGCAGGCAGATCATAGTATTCTCACGTTGTCAGTTCCCAAGTAGGAGGTGTTTCGTATACCGTCAACTTAAATACCTCCAATCCTTAGACAGAACATCACTGGTAGAGTTCCCTTATAATCACAGGAATGTTGGTCCTACTTACGCCAGAAACCCGCGAACCGGTCAACTTTCTCGGCCTGGTCAACGAACCGAGCGACCCAGACGTGAACCGCCCGCCAGACCGCTGAACCGCGTGCATTCGCCTGGACCGCTGAAGAACCGGACCGCGCCTGGCCGAACCGCACGCTTCTGCTCTGGACCGCGCCTGCTGACGTCAGCAGCGCATATGCTGACGTCAGCCCTACCCCGGACGCGTGCGAATTTCCGTCTGTAA

Protein sequence

MRLISVNSNSRITHIPIDVNHHCSVKDLLTHLTYPRKCYPPTFRSQRHVPTGYREERQLLVISLSDPILFRSSRCSEFYDLALRRGGCSRTTRRQIIVFSRCQFPSRRCFVYRQLKYLQSLDRTSLVEFPYNHRNVGPTYARNPRTGQLSRPGQRTERPRREPPARPLNRVHSPGPLKNRTAPGRTARFCSGPRLLTSAAHMLTSALPRTRANFRL

Homology

The following BLAST results are available for this feature:

BLAST of Spg015475 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015475 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015475 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015475 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015475.1	Spg015475.1	mRNA