Spg015423 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015423
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase
Location	scaffold10: 11550930 .. 11556509 (-)
RNA-Seq Expression	Spg015423
Synteny	Spg015423

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCCACGCCTAGTATGACAGAGTTTGCTCTGCTGAGCGTATTGAGAGGACTCTACGCCGGTATGACTAGAGATAAGGGTACAGGGTTAGTGAGTTTTCTTGTTGATTCTTTAAGTTATGCTTAAAAAGAATTTCTACTGCATTTCCTTGTACAAGCTAAATGTTTATGAGTTTTTGAACTATGAATTTTTCACGATATTTTGTTAGCTGAGTTAAAAACTTTCAAGAACTATTTTCGTATTAGAAAGTAAATACCACTCACTGGGCGTTAGCTCATTCTTTTTCTTTAAATTTTTCTACCAGGTAGCGACTGAGTTTTGACAAGCCTACAGAAGCCGATCTTGCCACTCGAGACCGTGTTTAGAGTGCCTTTTGTATGTATATGATGTTTTGGTTGGAAGTTATGTAAAAGTTTATATGTTACTAAGTGTAGTCGGTTGTAAATTATCGTATCTCGAAGTGTTGGGCTGAATGTGGTGGTTGAGACGCTTGAGTCTCCCATCTGGATTCTGGTGGTGATGTGGTATATAGGATAAGTGTATATGTCGTTCCTTTCCAGGTGTGTTTTAGCCAAGTTTTAGGGGAAACTCTGCCCAAATTTTTGGTCCCTTGAGAGCCTAAGCGTGGTTAAGAGCATGTAGAGGCCTTGAGTCCTATAGTTAGTTAGGGTTCATTGCCAGCACACCACGTCACTAGGTAGTTACGAGAGAGCTGGGGCGGGGTGTGTCAGTTTGCAGCGTCTCGACGCCTGGCCTTCTTCTAGCATGCTTCATTCTTTTATTTCTTCTTTGTTGCTCACTCGGCTTGGGACTCAAACCTTTGACTCCTTGGATCCATTCTTCAAGCTCGTCACGATCCTCACAGTCTTATCACTTCCTCGAGATCCATGGTCATCAAGTTAGCTCGAAAACTCTCTAAATCGCCTGAATTAGCTCCAATTTGTGTAGTTCGTCTCAGATGCCCTAAATGCACAAGTAATCTACAAAATAGACAAATAAAGCATAAAGTGCACTCTAACAGGTTTAGATTAATAACAAATCTAATTTGGTCCTATGAGGAGACTTTTTAAATTTTTCTAGAAGATGTCTTGCATTAGTGGAGTATTTTTCTTGATTTAGAGTTGGATTTGAATGCTAAGCAGTGAATTATTAGGTTCATATTTTTGTTGTCACCTCGATAGGTGTAGGGAAGAGCTAAAGAGTTAATTTTTTTTGCAAATTAGCATGTTTAATCTTGCCTAGCAGAAAACAAAAGCTTAAGTTTGGGAGTGTTTGAAAGCGCACATAACGAGCTATTTTTCCCTATGTTTATTTGCTGCAATTCGAGTTTGAATTGGCCAAAATTATGCACTTTAATGTTTCTTTTGTAGGAAATGCATTCTTGAAGGAATTGTTGAATTAGGAAGTTGATCGAGTGTTCGGAGCGCAAAAAGTGGCAAAGGAAGCGGAAAAGAATCGAGTCGAGACCTGCAGCAGCCTTTAGATCACCCGAGAGCACAGCGTTGAGACGCTGCCTTTTGACGTCTCGACGCTGCTGCAGGACCTTCCCAAGCCAGACTTCCCGAGAGGACAGCGGCGAGCATTGTCCCTAAAGCGTCGAGACACTGCCCAAATTTCCTAAATTATATGTGGCGACAAAGGCATAACGTCGAGACATTGTCTTGATTTTTCCTATAAATAGAACATTATCTTGCACGACCAAAGGGAGTTTATTTGGATAGGTTTTAGCCCTAAAATCAATTGGAGACGTTTTGCGGGAGCCGAAGCAAGGACAAGGAGCGGGAATCAAGTGAGAAAACGTGGAGATCGTGATGGGGACATGCGGTTTTCGACGGATTCGAGTTTTTACCTTTCTTTCCCTTATCTCTTGTAGTTTTTATGGCTTTCCATTCAAGTTGTGATTCTAGTTCCATGACTATGAGTAGTTAGCTTGTTTGTCTTCGGGATTGATATAGTCTATTAGATTTATGGATTGATTTATGTTTATGGTTGTGCGTTTATCTTATTTATGCAATTATTGGCTTAATGCTTTTAATCTACCAGCCATAGATTAAAGATTATTGTTCTAAATCTTGCTCGGGAGAGGGGGTTTGGATTAGAAATTAATTGCATGACTAAAGTAATTCTAAGACCGAGAGGTTTAAAGGTTTATGATAACTTTAGAAGTTGTAAAAAGGACTAGACTTGGGCCTTGCATGTAATTGAATCTAGATAGGAATATTTGGTTCTTTTGTATGCTTGAGAATCGATTATGCTCAGGAGAGAGAATTGTGAATGTAGTTTCCTTGACTTATAAGATAATTGCACATTAAAACCATGTTCCATGAATGATCAAACGAGTTTGGCGAGTCCTCATATCAAATAAATTTGTAAGTCACCGAACACTAAACTACTTGCAATAGTAGTGGCCAAGGTCGATCACAGGGAGTGGCGGTTGGTAATTATTTCCTATTTATTTTGAGTCAGAAAGCAGTAAAGGGGGGATTTCATACGAAGGGAAATCAACATTTAGGAAATTAAAGGCGGGAATTTAAATAACAAGAAATTAAAAGACAGGAAATTAAATGACAGAAAACATAAATTAGCAAAAAGTTAATTTAAATGCGCGACGCCGATTAGGGAGATTCTTGGGGTAGAATGGTTTGTTCGATCATCGTATTGCATCCTATTAAAGGCTAAATTTATTTGCTTGATTGCCCAATCGATCTAATCTGAATCTAGAAAAGACCCTAAGCCCACCTAAGCTATCTAACCCGATCATACATCGTCCATCGAATTAGAACCTAATTGATTAACTAATTAATTTGATTAAACCATCAAACTAACACAACTAACCAATTGCCCTAAGTTTAGTGGATTGATTAGGACATTAGAGATAATTAGGCCTAAATTCCTTTTAACGCTATTTTGGATCCTAGACCTATCATGCAGAGCAACAAAGTCAGAGAACTGCTCTTGGGACCCATTGTTGCATTTCCAAAGTGGTTAAAAAATATGATGCAAATTGACTCTAGAATACTATGCAAGTGCACATATATCTGCAGCAAGTGATAAGTAATTTATTGTATCCACGAGGTTTTGAACTGTAAACCCGAGACTTTCCTTGGATCACTTACTCTTGTCATCTATTGTGGTTTCATGGTTGAATTTAAGTTGTTGGGATTTACTAATTTAAAAGAAGAAAGAAAATAAATGAACCAAAGGAAAGGGAAGAAAGGAAAAAGAAAATAAAACAAATCAGCAATTAGGAAAATGAAAAAAAAAAAGGAAAATGAAAGGAAGTGAGAAAAGCCAGCAAACAACCCACCACCGACAAGCTTACCTCCAACCCATTTTTAGTAATTTTCAGCCACATTTCTCATCCTTTTCCATCCAAAATTTCAGAGCACTTGAGGGATAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGGGGTTTTGAGGTTGAAGAAGATAGGGAAAAGCTCAAGCAAAGCCAGTCATAGCAGAATCTGAGTTCAACATGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGTGAGGTTTGATTTTCTTGAACGTTAGTTCATTTTATAACAAATTGCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGAATCTCTGGTTTTCTCTGGTTTTTCGAGCATTTTGTGAGGTACAAGTTGAATCAGAATCTATATTTGGTATGGTTGGAAAGCTTATTCAATTGCCTACAACTTGCATGAAGGATTCGTGAGCCAAAAAGGACTTGAAGTAGGTTTAATTTCAGGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCCGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTAAAGTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGAGTGTTGGAAGGTGTGGTATTGAATCTGGAAAATCTAGAAAAGTAGAATGTGAAGTGTGATTTTTTTTAATTCAAGTGTCTAGAATTCATGAGCATGGAAGAATAAGACTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTCTGCAGGTCAGAAAACTAGTTAAGACAGTGAGTGACAAAACGAATTTCGAAAATTGTTTCCATGTTTAGATGTTTTACATGCTTTCTATGAATGAAACATGATTTCTATGAATGGTTTCAAGCATAAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTATGAAAAGTAGTTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTATTGTTTAATGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAGTGGTTTTTTTGAGATTTCCATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATTGGTCATGTTAGTTAATACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGTATCTGCGATGTTTTTTAGAAAGCTTTTATCATTGCACGTTTATGTTTAACGCCTTGGTTGAGCAGCTTTATGTGTTTAAAGTTTTATCACGTGTTCTGATTTCTGAATGTACAATTTTAAATTTAGTCACTCACTGGGCTTCGTAGCTCACCCTCTTTCAAAATGTTTTTCCACTTTTCAGGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGTAATGTTTTGTAAGGATTGGATAATTTAGTCCTAGAGGTCGTGGTTGTATAAACCCCAGTTGTATATGTTTTTGGTTGTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGCGGCACCTCGTGTATGTTGGATGGTTTTCAGGGATTCTGCTGTGTTGTGTTTCATTTAGAATATTTTATATCTAAGATTAGTACGTTTATCAGGTTCAATGTTACAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTGAGTTAACAGGTGGTCCGGGAGGGGGTGTGACATGAACAGTCTCACTTTACCTATTTTGTTTAGCTTTTTAGTGATTTCAAGATTGTTAAAATGATTGGGTTTTGAAATACTGCTGAAGCAAAAGAAATAACAGAGCAGAAATGTAAGCGGATAAAGAAGACAGATTGGAAACAGGCGTTGGTTAAGACTTCTGTAATTGTTAGAAAGATGCTCTAG

mRNA sequence

ATGTATTCCACGCCTAGTATGACAGAGTTTGCTCTGCTGAGCGTATTGAGAGGACTCTACGCCGGTATGACTAGAGATAAGGGTACAGGTGTTGGGCTGAATGTGGTGGTTGAGACGCTTGAGTCTCCCATCTGGATTCTGGTGGTGATGTGGAAGTTGATCGAGTGTTCGGAGCGCAAAAAGTGGCAAAGGAAGCGGAAAAGAATCGAGTCGAGACCTGCAGCAGCCTTTAGATCACCCGAGAGCACAGCGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCCGGCCAAGAGGAAATAGGTCGAGTCTGCAGGTCAGAAAACTAGTTAAGACAGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTGAGTTAACAGGTGGTCCGGGAGGGGCAAAAGAAATAACAGAGCAGAAATGTAAGCGGATAAAGAAGACAGATTGGAAACAGGCGTTGGTTAAGACTTCTGTAATTGTTAGAAAGATGCTCTAG

Coding sequence (CDS)

ATGTATTCCACGCCTAGTATGACAGAGTTTGCTCTGCTGAGCGTATTGAGAGGACTCTACGCCGGTATGACTAGAGATAAGGGTACAGGTGTTGGGCTGAATGTGGTGGTTGAGACGCTTGAGTCTCCCATCTGGATTCTGGTGGTGATGTGGAAGTTGATCGAGTGTTCGGAGCGCAAAAAGTGGCAAAGGAAGCGGAAAAGAATCGAGTCGAGACCTGCAGCAGCCTTTAGATCACCCGAGAGCACAGCGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCCGGCCAAGAGGAAATAGGTCGAGTCTGCAGGTCAGAAAACTAGTTAAGACAGTAGAGATTGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTGAGTTAACAGGTGGTCCGGGAGGGGCAAAAGAAATAACAGAGCAGAAATGTAAGCGGATAAAGAAGACAGATTGGAAACAGGCGTTGGTTAAGACTTCTGTAATTGTTAGAAAGATGCTCTAG

Protein sequence

MYSTPSMTEFALLSVLRGLYAGMTRDKGTGVGLNVVVETLESPIWILVVMWKLIECSERKKWQRKRKRIESRPAAAFRSPESTARKIKGSREPRICVVCVRGISGQIGWESRFHFFRPRGNRSSLQVRKLVKTVEIELPVPDTLPTSAESSRSSSNTWVELYIESVHIEGQRVSLEEDDVRWLHAIFRTELTGGPGGAKEITEQKCKRIKKTDWKQALVKTSVIVRKML

Homology

[Close]

BLAST of Spg015423 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-17
Identity = 52/98 (53.06%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 118 PRGNRSSLQVRKLVKTVEIELPVPDTLPTSAESSRSSSNTWVELYIESVHI--------- 177
           PRGNR +L   KL KTVEIELPVPDTLPTSAESS+S+S+TW+ELY ESVH+         
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSD 138

Query: 178 ---------EGQRVSLEEDDVRWLHAIFRTELTGGPGG 198
                    EG    +  DD+ WLHA+F  +  G PGG
Sbjct: 139 VRVASYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGG 176

[Close]

BLAST of Spg015423 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 5.7e-17
Identity = 55/99 (55.56%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 118 PRGNRSSLQVRKLVKT-----------------VEIELPVPDTLPTSAESSRSSSNTWVE 177
           PRGNR SLQ  +L KT                 VEIELP+PDTLPTSAESS S+S+T +E
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 178 LYIESVHIE--GQRVSLEEDDVRWLHAIFRTELTGGPGG 198
           LY ESVH+E  G    +  DDV WLHA+FR + TGGPGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGG 221

[Close]

BLAST of Spg015423 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 5.7e-17
Identity = 55/99 (55.56%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 118 PRGNRSSLQVRKLVKT-----------------VEIELPVPDTLPTSAESSRSSSNTWVE 177
           PRGNR SLQ  +L KT                 VEIELP+PDTLPTSAESS S+S+T +E
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 178 LYIESVHIE--GQRVSLEEDDVRWLHAIFRTELTGGPGG 198
           LY ESVH+E  G    +  DDV WLHA+FR + TGGPGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGG 221

[Close]

BLAST of Spg015423 vs. NCBI nr
Match: KAA0067117.1 (hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ97479.1 hypothetical protein E5676_scaffold598G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 6.3e-16
Identity = 65/167 (38.92%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 87  IKGSREPRICVVCVRGISGQIGWESRFHFFR--------------PRGNRSSLQVRKLVK 146
           I+  REPRI      G          F F +              PRGNRSSLQ  +L K
Sbjct: 50  IRSGREPRILYCLCSGKFWTNWLRISFSFLQVLEVRISNLENLEMPRGNRSSLQTGELDK 109

Query: 147 T-----------------VEIELPVPDTLPTSAESSRSSSNTWVELYIESVHI------- 205
           T                 VEIELPVPDTLPTSAES  S+S+TW+ELY E VH+       
Sbjct: 110 TVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFEFVHVEMLFYKP 169

[Close]

BLAST of Spg015423 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-15
Identity = 57/130 (43.85%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 115 FFRPRGNRSSLQVRKLVKTV---------------EIELPVPDTLPTSAESSRSSSNTWV 174
           +  PRGNR SLQ  +L KTV                IELPVPDTLPTSAESS S+S+TW+
Sbjct: 60  YLGPRGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWL 119

Query: 175 ELYIESVHIE---------------------GQRVSLEEDDVRWLHAIFRTELTGGPGGA 209
           ELY ESVH+E                     G    +  DDV WLHA+FR +  GGPGG 
Sbjct: 120 ELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGGG 179

[Close]

BLAST of Spg015423 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.2e-18
Identity = 52/98 (53.06%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 118 PRGNRSSLQVRKLVKTVEIELPVPDTLPTSAESSRSSSNTWVELYIESVHI--------- 177
           PRGNR +L   KL KTVEIELPVPDTLPTSAESS+S+S+TW+ELY ESVH+         
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSD 138

Query: 178 ---------EGQRVSLEEDDVRWLHAIFRTELTGGPGG 198
                    EG    +  DD+ WLHA+F  +  G PGG
Sbjct: 139 VRVASYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGG 176

[Close]

BLAST of Spg015423 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-17
Identity = 55/99 (55.56%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 118 PRGNRSSLQVRKLVKT-----------------VEIELPVPDTLPTSAESSRSSSNTWVE 177
           PRGNR SLQ  +L KT                 VEIELP+PDTLPTSAESS S+S+T +E
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 178 LYIESVHIE--GQRVSLEEDDVRWLHAIFRTELTGGPGG 198
           LY ESVH+E  G    +  DDV WLHA+FR + TGGPGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGG 221

[Close]

BLAST of Spg015423 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-17
Identity = 55/99 (55.56%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 118 PRGNRSSLQVRKLVKT-----------------VEIELPVPDTLPTSAESSRSSSNTWVE 177
           PRGNR SLQ  +L KT                 VEIELP+PDTLPTSAESS S+S+T +E
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 178 LYIESVHIE--GQRVSLEEDDVRWLHAIFRTELTGGPGG 198
           LY ESVH+E  G    +  DDV WLHA+FR + TGGPGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGG 221

[Close]

BLAST of Spg015423 vs. ExPASy TrEMBL
Match: A0A5A7VIY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00400 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.0e-16
Identity = 65/167 (38.92%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 87  IKGSREPRICVVCVRGISGQIGWESRFHFFR--------------PRGNRSSLQVRKLVK 146
           I+  REPRI      G          F F +              PRGNRSSLQ  +L K
Sbjct: 50  IRSGREPRILYCLCSGKFWTNWLRISFSFLQVLEVRISNLENLEMPRGNRSSLQTGELDK 109

Query: 147 T-----------------VEIELPVPDTLPTSAESSRSSSNTWVELYIESVHI------- 205
           T                 VEIELPVPDTLPTSAES  S+S+TW+ELY E VH+       
Sbjct: 110 TVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFEFVHVEMLFYKP 169

[Close]

BLAST of Spg015423 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.2e-16
Identity = 57/130 (43.85%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 115 FFRPRGNRSSLQVRKLVKTV---------------EIELPVPDTLPTSAESSRSSSNTWV 174
           +  PRGNR SLQ  +L KTV                IELPVPDTLPTSAESS S+S+TW+
Sbjct: 60  YLGPRGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWL 119

Query: 175 ELYIESVHIE---------------------GQRVSLEEDDVRWLHAIFRTELTGGPGGA 209
           ELY ESVH+E                     G    +  DDV WLHA+FR +  GGPGG 
Sbjct: 120 ELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGGG 179

The following BLAST results are available for this feature:

BLAST of Spg015423 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052218.1	1.5e-17	53.06	uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0042035.1	5.7e-17	55.56	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK17971.1	5.7e-17	55.56	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0067117.1	6.3e-16	38.92	hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ9747...	[more]
TYK11835.1	1.1e-15	43.85	uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]	[more]

BLAST of Spg015423 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAH6	7.2e-18	53.06	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7TKT0	2.8e-17	55.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3D150	2.8e-17	55.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7VIY9	3.0e-16	38.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CJX3	5.2e-16	43.85	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Spg015423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015423.1	Spg015423.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity