Spg015417 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015417
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ty3-gypsy retrotransposon protein
Location	scaffold10: 13068612 .. 13072948 (+)
RNA-Seq Expression	Spg015417
Synteny	Spg015417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAATTTAGTAAGACAATTGCGAGATCTTGGGTTGTCCGTCTGAGTTAACTAGAGGTAGTTTCAGTGATTATCGAGCTATGCATGAGGGGTAGCAGACATAACTCCTATTAATCAATTAATCTAATTTTGTGATATCAGATTAGTTAGTTGATTAAATTCAGGCTAGATACGAAGATCTTCCGAATAGCCAAGAAGCATCGTCGGGCTCAATAATAATTCATAAGATTAATTTGTATAGCAAACTAGAAGGCCAAATAAACAAGAAATCCATTGAAAATTCTCAATCTAGCTATTCTATTTCATCAAGTGTTATTTCCCCCGTATTCTTAAGTCTTTTTATCTTTGCATGTTGTTTAGCTTTTCCAGAAATTTCTATTTTTCAGCATTTTTAATTTATTTGATTGTGACACCCCCTTTTTTTCCAAACCCCCTTATTTTTGTTGTTTCATAACAGCTCGAATTTGGAAAGAAAATTCCATTCGTTGTGGACGACCCAATCACTACCTACTGCAAAGTAGCATAGAGCCGGAGTTTACAAGTTTTATTTAATGCGAGGATTCGACAAACTCGACCTGTCAATGATTCATGAATTTAGAGTGATCTTTAAACTTCTTAAATTTAGAAAGTGTACATGAAATTGATATACTTTAAAAGATATTTACACAGGGCTTAGGGACATGAAATTGATGTACCTGGGCTAAGATTCATGAAATTGACGTTCCTCCATAGGTGGCACATGAAATTGATGTGTCTAGGATGTGCACAAAATTGATGTATATCCCAGTAATTAAGAAGTTTAACGATAGAAGATTTTAGGAGCCACCAAAACATGATTTTATTGAGTAAATTGCATGTGAATGTGTGACCCAATCTCAATAGTGGGGTGAGGGGTCTCTTACTGAGTATTTTAAATACACATTTGTTGGCATACAAAATTTTCTTCAAATAATTGTCTAAGTTCGTGAAATTAAAATATGCTAATTTTATGAAATAGGTTGAATTGGGTCCAATTTAAACCCGTATTCAATAATGTAATTGGGCCAGAAGTCCAAATTTTCAAGCCCAAGCCCATGAATGAGCCTAAATGCATTTCGAGCCCAAGCCCATGAATGGGCCCAAATGCATTCCAAGCCCAAGCCCAAGCCCACAAAGGGCCTTTGGAAAACTCTATTAATAGGAGGCATGGCCTCTCATTTTGGGGGACGACAAAAAGAAAGGAAGAAGAGAAAGCTGTCAGAAGACTCTGAAGATTGAAGCTCCTCCTGCAAAACTGAAGATCGAAGCTCAGATCCTCGTCAAATTCAGCTACAGAACTGAAGAACAAGGCTCTGATCATCTTCAAGTGACTCCTACGTGGGACCAGTTACTGGCGGACGCTCCAAGGAAATTCAGAAAATCAGAAGAAGAACAAGCCTCTGTCATTGCAAATATGATATGGACTCAAATGGTAGAGCCAAACCAAGGTGGGATGGTCATGCAGGAAAATCCTTTATTTGACTATTCTACTTCATCTTATGAGCAGGCAAAGGAGACATCAGATCCTGACGTGATGTCTGTAATGATGGCCGACATAGGTACAGGCGAAGAAAGAATGGCTGAAATGGAAAGAAAGGTCAGCATGCTGATGAAGGCGGTTGAGGAGAGAAATTATGAAATTGCATCTTTGAAGAATCACATAGAAAGTCGTGATGTCGTCGAGTCAAGCCAAACACCCGCTACAAAGAATAATGATAAAGGGAAACTGACATGCAAGAAAACCAGCCTTAGCATTCCACTTCATTTGCTTCGCTATCCGTTCAACAACTCCAAGATATGATTATGAGCTCCATTAGAGCTCAATATGGTGGACCTACTCAAAATTCTCTTATGTACTCCAAACCATACACTAAGAGAATTGACAACTTGAGGATGCCTACCGGATATCAACCTCCAAAATTTCAACAATTCGATGGAAAGGGGAATCCTAAGCAGCATGTTGCTCACTTTGTTGAGACATGCGAAAATGTTGGGACTCGTGGAGATCTCCTAGTTAAACAATTCGTTCGAACCTTAAAGAGCAATGCTTTTGATTGGTATACCGACTTAGAGCCAGAGATAATCGACAATTGGGAACAGCTTGAAAGGGAGTTCCTGAATCGCTTTTATAGCACAAGGCGAATTGTCAGCATGACGGAGCTCACAAATACAAAACAACGGAAGGGTGAACCTGTCATTGATTATATTAATCGTTGGAGAGCTTTAAGTCTTGATTGCAAAGATCGACTCACTGAGCTATCCGTTGTCGAAATGTGCATTCAAGGAATGAACTGGGAACTTTTTTATATATTGTAGGGCATAAAACCTCGCAACTTTGAAGAATTAGCAACCCGCGCTCATGACATGGAGCTAAGTATTGCTACTAGAGGGAATAAAGACTTTCCCTTCCCCGATGTGAACAAGGAGAAGAAATAAGTGAAGAGCACCGAGAAAGCATTGAAGGGTGCTACAAGAGAATCCATGGTCGTTAATACGGCCCCTCTGAAGTTTACTTCTAACGGAAGAGAAAAGAAAATAGAGAAGCGTCAAAATCAAGAAAAAGTCTACCATTTTTCAAACACTCGCATTCCAGATATGTTAGAGTAGCTGTTGGAAAAGAGACTCATCGAGCTCCCTGAACTCAAACGGCCTGAAGAGATGGGAAAAGTAAATGGTCTCAACTATTGTAAATATCACCGAGTCGTTAGTCATCCAGTGGAGAAATGTTTCGTGTTAAAGGAGCTAATCTTGAAGTTAGCTCGGAAAAGGAAAATTGAGCTAGATCTTGATGAAGTAGCTCAAGCAAATCACCCTGTCGTAATAACTCATCCTAGTGTCCAGTCGCCTACAAGTTTACCGTATGATCAGAGAGGAAGCTTAATCCAATTCGGCACCTTCGAACCTATTATCGTTTGGTCTCAACTAGAAGCCTTAGGAAATGACTTCCTAGAAAGGGCCCTCTACGAAGAAGATCTTCAAGAAAAGATTAGGCAAATTGAAGGCGAAGATGGAGGTTGGACACTCGTAACTCAACGAAGAACCAAAAGCAAAATTGGGTTCAGAAAGAATCTAGCTTGTTTCAAGAACACAAAAGAAAAAGCATGTCTTGAAGGAAAAAGGGAAGAAGTTTACGAGAAGGCCCAAGCCTATCTTAGAGGAAAGTGAAAAGCATATCCAACCTCCAAAGCCAATAACTCTAAAAGAATTCTTCCCAATAACTTTTCTAGAAGGAATCGATCAAACTGTTACATGTCACGTTGTCAATGTGACAGAAGATGATAATGTCACCTCGATCGCGTCAGAAGCCATCACGAAGCTGGAAGACCTACCTTCCTTTAGTGTAGATAATTTACTATCGCTCCCTCAAGAGACGAAGAACACTCTCATCGAAGTGTTAGAGGATTGTAAAGCATTTATTGTTGCTCCATGTTGCATGTCCATAACTTTTACTGATGAAGATCTACTACTCGGATCAAAACCTCATAATAGGCATTTGTTCGTCTCAGACTACATCAGAGAGCAAAAGGTTAGCCGAATTCTCATTGATGATGGTTTTGCCGTCAACATCGTCAACATAATGCCCAAGTCTACCATGAATCAACTAGGCCTTCTGATGCAAGAATTGTCGAATAGTAAGTTAGCAATTCAAGGTTTTAACCAAGGTGGGTGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTATTTCTATATTGATTTGTGTGCCTTTTGTGCTAAATAGGGTTGCTTTTAGATGATTATTATATGTTCTAACCCATTTGGAAGAATAGATGCATTGGAAGTTATTTTGTGCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAAGAAGCAAAACTGCCACGTCACAGCTCGTTATCCATTTTAATGAACTGAAGTTTGTTAAGCTATTCTCGGATTTAAGAAGCAAGGAGAGCCATCCACGTGTCCAATTTGACCTAATTAGGGCTTGCTATCACTTTATAAAAGGAGGAGCCGTCTCAAGTCAAATTCATTCCATTCTGGGGAGGAACATTCCACTCTTGGATAGTTCATTTCCATTATTGGGAGCCGAATAGAGGAGAAAGATTAGGGACTACAAGAAGACCATCAATTACGAAGTTGATCAAGGGAATTAGTATTTTCTTGTATTGTTTTGTAATTATGGATGCATTTACTCAGATTGTAACGTGTGTTACTATGCACTTTATGAACTAAGTAATTTTAGGTGTTGGTTAGGAATATGTAATTGTCGTGCTTAATCTCTATGCAATATATGTTGGTTTGATGCATCTTGATTA

mRNA sequence

ATGATTAATTTAGAGGCATGGCCTCTCATTTTGGGGGACGACAAAAAGAAAGGAAGAAGAGAAAGCTGTCAGAAGACTCTGAAGATTGAAGCTCCTCCTGCAAAACTGAAGATCGAAGCTCAGATCCTCGTCAAATTCAGCTACAGAACTGAAGAACAAGGCTCTGATCATCTTCAAGTGACTCCTACGTGGGACCAGTTACTGGCGGACGCTCCAAGGAAATTCAGAAAATCAGAAGAAGAACAAGCCTCTGTCATTGCAAATATGATATGGACTCAAATGGTAGAGCCAAACCAAGGTGGGATGGTCATGCAGGAAAATCCTTTATTTGACTATTCTACTTCATCTTATGAGCAGGCAAAGGAGACATCAGATCCTGACGTGATGTCTGTAATGATGGCCGACATAGGTACAGGCGAAGAAAGAATGGCTGAAATGGAAAGAAAGAGAGGAAGCTTAATCCAATTCGGCACCTTCGAACCTATTATCGTTTGGTCTCAACTAGAAGCCTTAGGAAATGACTTCCTAGAAAGGGCCCTCTACGAAGAAGATCTTCAAGAAAAGATTAGGCAAATTGAAGGCGAAGATGGAGGTTGGACACTCAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAAGAAGCAAAACTGCCACGTCACAGCTCGTTATCCATTTTAATGAACTGAAGTTTGTTAAGCTATTCTCGGATTTAAGAAGCAAGGAGAGCCATCCACGTGTCCAATTTGACCTAATTAGGGCTTGCTATCACTTTATAAAAGGAGGAGCCGTCTCAAGTCAAATTCATTCCATTCTGGGGAGGAACATTCCACTCTTGGATAGTTCATTTCCATTATTGGGAGCCGAATAG

Coding sequence (CDS)

ATGATTAATTTAGAGGCATGGCCTCTCATTTTGGGGGACGACAAAAAGAAAGGAAGAAGAGAAAGCTGTCAGAAGACTCTGAAGATTGAAGCTCCTCCTGCAAAACTGAAGATCGAAGCTCAGATCCTCGTCAAATTCAGCTACAGAACTGAAGAACAAGGCTCTGATCATCTTCAAGTGACTCCTACGTGGGACCAGTTACTGGCGGACGCTCCAAGGAAATTCAGAAAATCAGAAGAAGAACAAGCCTCTGTCATTGCAAATATGATATGGACTCAAATGGTAGAGCCAAACCAAGGTGGGATGGTCATGCAGGAAAATCCTTTATTTGACTATTCTACTTCATCTTATGAGCAGGCAAAGGAGACATCAGATCCTGACGTGATGTCTGTAATGATGGCCGACATAGGTACAGGCGAAGAAAGAATGGCTGAAATGGAAAGAAAGAGAGGAAGCTTAATCCAATTCGGCACCTTCGAACCTATTATCGTTTGGTCTCAACTAGAAGCCTTAGGAAATGACTTCCTAGAAAGGGCCCTCTACGAAGAAGATCTTCAAGAAAAGATTAGGCAAATTGAAGGCGAAGATGGAGGTTGGACACTCAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAAGAAGCAAAACTGCCACGTCACAGCTCGTTATCCATTTTAATGAACTGAAGTTTGTTAAGCTATTCTCGGATTTAAGAAGCAAGGAGAGCCATCCACGTGTCCAATTTGACCTAATTAGGGCTTGCTATCACTTTATAAAAGGAGGAGCCGTCTCAAGTCAAATTCATTCCATTCTGGGGAGGAACATTCCACTCTTGGATAGTTCATTTCCATTATTGGGAGCCGAATAG

Protein sequence

MINLEAWPLILGDDKKKGRRESCQKTLKIEAPPAKLKIEAQILVKFSYRTEEQGSDHLQVTPTWDQLLADAPRKFRKSEEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQAKETSDPDVMSVMMADIGTGEERMAEMERKRGSLIQFGTFEPIIVWSQLEALGNDFLERALYEEDLQEKIRQIEGEDGGWTLNILLSDLREQNLRCSKARSKTATSQLVIHFNELKFVKLFSDLRSKESHPRVQFDLIRACYHFIKGGAVSSQIHSILGRNIPLLDSSFPLLGAE

Homology

[Close]

BLAST of Spg015417 vs. NCBI nr
Match: KAA0042128.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-09
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 73  RKFRKSEEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQA-KETSDPDVMSV 132
           RK + SE+     +A  IW Q+ +P +GG+V++ENP  D   S YE++ +E S P++MSV
Sbjct: 25  RKIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPTIDEHNSLYERSNEEASQPNIMSV 84

Query: 133 MMADIGTGEERMAEMERKRGSLIQ 156
           M+ D+ T E+RMAE+E+K   L++
Sbjct: 85  MVTDVDTSEDRMAELEKKVNMLMK 108

[Close]

BLAST of Spg015417 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-09
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 73  RKFRKSEEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQA-KETSDPDVMSV 132
           RK + SE+     +A  IW Q+ +P +GG+V++ENP  D   S YE++ +E S P++MSV
Sbjct: 25  RKIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPTIDEHNSLYERSNEEASQPNIMSV 84

Query: 133 MMADIGTGEERMAEMERKRGSLIQ 156
           M+ D+ T E+RMAE+E+K   L++
Sbjct: 85  MVTDVDTSEDRMAELEKKVNMLMK 108

[Close]

BLAST of Spg015417 vs. NCBI nr
Match: KAA0051508.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-08
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 79  EEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQAKETSDPDVMSVMMADIGT 138
           E++Q S +A  I  Q++E  + G+V++ENPL+D S S+  ++K+ + PDVMSV+MADI T
Sbjct: 32  EQDQGSNVAQSIPEQLMESPKAGIVIKENPLYDNSDSTSSKSKKEAHPDVMSVIMADI-T 91

Query: 139 GEERMAEMERKRGSLIQ 156
           GE  MAEMERK   L++
Sbjct: 92  GEAAMAEMERKINFLVK 107

[Close]

BLAST of Spg015417 vs. NCBI nr
Match: TYK24158.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 3.6e-08
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 79  EEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQAKETSDPDVMSVMMADIGT 138
           E++Q S +A  I  Q++E  + G+V++ENPL+D S S+  ++K+ + PDVMSV+MADI T
Sbjct: 32  EQDQGSNVAQSIPEQLMESPKAGIVIKENPLYDNSDSTSSKSKKEAHPDVMSVIMADI-T 91

Query: 139 GEERMAEMERKRGSLIQ 156
           GE  MAEMERK   L++
Sbjct: 92  GEAAMAEMERKINFLVK 107

[Close]

BLAST of Spg015417 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 6.2e-08
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 79  EEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQAKETSDPDVMSVMMADIGT 138
           E++Q S +A  I  Q++E  + G+V++ENPL+D S SS  ++K+ + PDVMSVMMADI T
Sbjct: 32  EQDQGSNVAQSILKQLMESLKAGIVIKENPLYDNSDSSSSKSKKETHPDVMSVMMADI-T 91

Query: 139 GEERMAEMERKRGSLIQ 156
            E  MAEMERK   L++
Sbjct: 92  PEAAMAEMERKINFLMK 107

[Close]

BLAST of Spg015417 vs. ExPASy TrEMBL
Match: A0A5A7TH26 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006120 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 73  RKFRKSEEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQA-KETSDPDVMSV 132
           RK + SE+     +A  IW Q+ +P +GG+V++ENP  D   S YE++ +E S P++MSV
Sbjct: 25  RKIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPTIDEHNSLYERSNEEASQPNIMSV 84

Query: 133 MMADIGTGEERMAEMERKRGSLIQ 156
           M+ D+ T E+RMAE+E+K   L++
Sbjct: 85  MVTDVDTSEDRMAELEKKVNMLMK 108

[Close]

BLAST of Spg015417 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 73  RKFRKSEEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQA-KETSDPDVMSV 132
           RK + SE+     +A  IW Q+ +P +GG+V++ENP  D   S YE++ +E S P++MSV
Sbjct: 25  RKIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPTIDEHNSLYERSNEEASQPNIMSV 84

Query: 133 MMADIGTGEERMAEMERKRGSLIQ 156
           M+ D+ T E+RMAE+E+K   L++
Sbjct: 85  MVTDVDTSEDRMAELEKKVNMLMK 108

[Close]

BLAST of Spg015417 vs. ExPASy TrEMBL
Match: A0A5A7U8B3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00300 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 79  EEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQAKETSDPDVMSVMMADIGT 138
           E++Q S +A  I  Q++E  + G+V++ENPL+D S S+  ++K+ + PDVMSV+MADI T
Sbjct: 32  EQDQGSNVAQSIPEQLMESPKAGIVIKENPLYDNSDSTSSKSKKEAHPDVMSVIMADI-T 91

Query: 139 GEERMAEMERKRGSLIQ 156
           GE  MAEMERK   L++
Sbjct: 92  GEAAMAEMERKINFLVK 107

[Close]

BLAST of Spg015417 vs. ExPASy TrEMBL
Match: A0A5D3DKU9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold610G00640 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 79  EEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQAKETSDPDVMSVMMADIGT 138
           E++Q S +A  I  Q++E  + G+V++ENPL+D S S+  ++K+ + PDVMSV+MADI T
Sbjct: 32  EQDQGSNVAQSIPEQLMESPKAGIVIKENPLYDNSDSTSSKSKKEAHPDVMSVIMADI-T 91

Query: 139 GEERMAEMERKRGSLIQ 156
           GE  MAEMERK   L++
Sbjct: 92  GEAAMAEMERKINFLVK 107

[Close]

BLAST of Spg015417 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-08
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 79  EEEQASVIANMIWTQMVEPNQGGMVMQENPLFDYSTSSYEQAKETSDPDVMSVMMADIGT 138
           E++Q S +A  I  Q++E  + G+V++ENPL+D S SS  ++K+ + PDVMSVMMADI T
Sbjct: 32  EQDQGSNVAQSILKQLMESLKAGIVIKENPLYDNSDSSSSKSKKETHPDVMSVMMADI-T 91

Query: 139 GEERMAEMERKRGSLIQ 156
            E  MAEMERK   L++
Sbjct: 92  PEAAMAEMERKINFLMK 107

The following BLAST results are available for this feature:

BLAST of Spg015417 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042128.1	4.3e-09	42.86	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK18071.1	4.3e-09	42.86	uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]	[more]
KAA0051508.1	3.6e-08	49.35	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK24158.1	3.6e-08	49.35	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0061113.1	6.2e-08	50.65	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp...	[more]

BLAST of Spg015417 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TH26	2.1e-09	42.86	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3D1E5	2.1e-09	42.86	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]
A0A5A7U8B3	1.8e-08	49.35	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DKU9	1.8e-08	49.35	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BY54	3.0e-08	50.65	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Spg015417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015417.1	Spg015417.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process