Spg015384 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCAAAGCGAGAGCCCAAAAGTCAACAATGGAAGAGAAGATCCAAAAGAAATGAAGTTGGCCCAAGTTTCAAGCCCAAATCCGTGTGGACTGTTCTGGAAACCGCACAGCGTCGATTTCTTGGTGGGCAAGCTGATGACGTCACAGCGTTGCGACGCTGTGCCCTTAGCGTCGCGACGCTGTCCCTATTCCGGGACTATATAGGACCCCCTTGCTGCCCATTTTTCTCATCAATCATTCCACCATCCTTTCTTTCCTTCCTTTCCTTTGCTCTCTTTGAGCATTCTCTCAAGGCTTTTTAGCCTTTTTGAGAGTTAGAAGTGGGAAATTTTGTGGGGAGCTTTTTGGGAGCACTCTAGGAGGCTCGGGGCCTGTTTGGAGGGACTCCAAGCGCTAGCGACGGGGTTCTAGTCGGTCATTTCCTTTTCTCTTATTTTGCTCCAATTTATGCTTTCAATTGTATACATTGTGGATATTATAGCCATGTATAGCTAAACCCCATTTTGGGGTCTAGAAATGAAAATTCATAGTTAAATGTTATTATAATTGCCTATCTCTTGCCCTTTTTACTAATTATTTGTATGGATGCTCGTAATGCTGTTTATAATCTGGCCAATTATATACTGATCTGATTCTTAATGGAAACTCGACGGAGAGAAATTAGGATAGATCATAATGCATGCAACTAGTTTAATTGCCCGTAGTGACAACGAGATTAGTCTATTAAACTTAGATTCCAATAATGAATCTGAGCATATTAATTAACGATTTTTAATGGCGCTAAGGACACTTAGGTTGTTAAAATGAGTTACTTATAATTAGGGGAAACCGACAGGAGAACCTATGTGATTAACGGAGATTCTAGGATTATAATTAGTTGGGCAATGAGATAGGATAATTGTAATAATTAATTAGCTATTAATTGATTTTCAAGACCCCACTTCTCACTCAAAACTCTTTCTCCATAATTTTTTATTTCTTTGATTGATCATTTTAAATCTTTAATTGCTTTAATTTTTAATTCATTTTAGTTTCAAGGTTTGGTCCCTAAATATTATTTCGCCCAAGTACTTTTAGTGATCAAAATTTTTTTGCTTTGTTTATTTATCGTTTCGCCTCCCTGTGGATTCGATACCCGGAATATTTCCGTTTTATATTACTTGCGGCCTATGCGCTTTGCAGTCCATCACCGCATTCTGAAGAAGGCCAAGCTGAGGCCACTAAAGAGCAACCCGCTGATGAGGTTTTGGAACCTCTATTCAAAGATGATCCACCAACAGCTGATAGTACCTCTTCAGGAGAGAAGAGGGATGAAGAAGATAAAGCAAGCAATGAGGTCGAGACCTGCAGTGACTCTGAAACAGAATCCGACTTAGAGATTAAGGAGCTGGATGACGACCAAGTTCCTATCTCTGTGGCATTGAGGAGAAAGAGAAGAAGAGAGATTAAAGCTGAACGGAGGACCAAAAATAAGAATGATCGTATTTTTGCTAAGAGGCCGAGGACTAGGTCCATGGACGCCTCACCAGCAGCTCCTCCTACCATCTCACCCGCCAAGTCAAAAGCCAAATCACCCGAGGCTGCATCTCCTAAAAATCCATTCCCCGAGGTATTCAAAGATGTAAATTTTCAGGAAAGGATGGAGATCATGAGAAAGAGAGATTTCCCAGGAGGTCGTAGTGCCTTTAGTTCGAGAGTTTTATACTGCCCTGAGGGAGGAAAGTATCAGTATGGCGGTGGTGAGAGGCAAAATGGTCAGCTTCTCTTCAGTAGACATTAACAGGGTGTACAGAATCAAAGCACCCCTGAATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCACTGAAATTAGTGGCAAACAAGGGAGTTCAGTGGAAAGAGTCCCAGACGAAGGTGAAGACTCTAGTGCCACGCGACCTCAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGTTTGATGTCAACCACCCACGATAGCACCATTTCAGTAGATAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAGGTCAACATCGGGAGCATAATCAGGGATGAGATTCTTGCATGTTGAAGGAAACCAGCAGGTAAACTTTTCTTTGGATCACTCATCACCCAGCTTTGCCAAAGGGTGAAGATAGTTCAGGGCAAGGACGAGGAGCGTAATTTCTTCAAACCGACCATCGACCTGTCCTTGATCGGGAAACTTGTTAGCGAGCAGAAATGTCGCTATTTTAGTCCCAATTTATTAGGCTTCTTTGTGCTTTAATTGTGTTTTTATTGAAAATATTTGATGTATTTTGTTAATTGGTCTTTAGGAGAAAATTATGGATTTTGGTGATAAAAGTGCCCAAAATGAAGCCATTCAAGCCCAATTTCTATGCTTCGGTCAAGGGGAGTCAAAAGAGGACAACTATGAAGAAAAAGCCCAAAAAGAATTGAAGTTGGCCAAAGAAAAGAAGCCCAATCCGCAGCTGGAAATTCTGGTTGGCTTGCAAGTCGTTGACGTCACAGCGTCGCGACGTTGTGCCGTATAG ATGAGTCAAAGCGAGAGCCCAAAAGTCAACAATGGAAGAGAAGATCCAAAAGAAATGAAGTTGGCCCAAGTTTCAAGCCCAAATCCGTGTGGACTGTTCTGGAAACCGCACAGCGTCGATTTCTTGGTGGGCAAGCTGATGACGTCACAGCGTTGCGACGCTGTGCCCTTAGCTCCATCACCGCATTCTGAAGAAGGCCAAGCTGAGGCCACTAAAGAGCAACCCGCTGATGAGGTTTTGGAACCTCTATTCAAAGATGATCCACCAACAGCTGATAGTACCTCTTCAGGAGAGAAGAGGGATGAAGAAGATAAAGCAAGCAATGAGGTCGAGACCTGCAGTGACTCTGAAACAGAATCCGACTTAGAGATTAAGGAGCTGGATGACGACCAAGTTCCTATCTCTGTGGCATTGAGGAGAAAGAGAAGAAGAGAGATTAAAGCTGAACGGAGGACCAAAAATAAGAATGATCGTATTTTTGCTAAGAGGCCGAGGACTAGGTCCATGGACGCCTCACCAGCAGCTCCTCCTACCATCTCACCCGCCAAGTCAAAAGCCAAATCACCCGAGGCTGCATCTCCTAAAAATCCATTCCCCGAGGAAAGTATCAGTATGGCGGTGGTGAGAGGCAAAATGGTCAGCTTCTCTTCAGTAGACATTAACAGGGTGTACAGAATCAAAGCACCCCTGAATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCACTGAAATTAGTGGCAAACAAGGGAGTTCAGTGGAAAGAGTCCCAGACGAAGGTGAAGACTCTAGTGCCACGCGACCTCAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGTTTGATGTCAACCACCCACGATAGCACCATTTCAGTAGATAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAGGAGAAAATTATGGATTTTGGTGATAAAAGTGCCCAAAATGAAGCCATTCAAGCCCAATTTCTATGCTTCGGTCAAGGGGAGTCAAAAGAGGACAACTATGAAGAAAAAGCCCAAAAAGAATTGAAGTTGGCCAAAGAAAAGAAGCCCAATCCGCAGCTGGAAATTCTGGTTGGCTTGCAAGTCGTTGACGTCACAGCGTCGCGACGTTGTGCCGTATAG ATGAGTCAAAGCGAGAGCCCAAAAGTCAACAATGGAAGAGAAGATCCAAAAGAAATGAAGTTGGCCCAAGTTTCAAGCCCAAATCCGTGTGGACTGTTCTGGAAACCGCACAGCGTCGATTTCTTGGTGGGCAAGCTGATGACGTCACAGCGTTGCGACGCTGTGCCCTTAGCTCCATCACCGCATTCTGAAGAAGGCCAAGCTGAGGCCACTAAAGAGCAACCCGCTGATGAGGTTTTGGAACCTCTATTCAAAGATGATCCACCAACAGCTGATAGTACCTCTTCAGGAGAGAAGAGGGATGAAGAAGATAAAGCAAGCAATGAGGTCGAGACCTGCAGTGACTCTGAAACAGAATCCGACTTAGAGATTAAGGAGCTGGATGACGACCAAGTTCCTATCTCTGTGGCATTGAGGAGAAAGAGAAGAAGAGAGATTAAAGCTGAACGGAGGACCAAAAATAAGAATGATCGTATTTTTGCTAAGAGGCCGAGGACTAGGTCCATGGACGCCTCACCAGCAGCTCCTCCTACCATCTCACCCGCCAAGTCAAAAGCCAAATCACCCGAGGCTGCATCTCCTAAAAATCCATTCCCCGAGGAAAGTATCAGTATGGCGGTGGTGAGAGGCAAAATGGTCAGCTTCTCTTCAGTAGACATTAACAGGGTGTACAGAATCAAAGCACCCCTGAATCCAAGAGGGAATGATGTCATTAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCACTGAAATTAGTGGCAAACAAGGGAGTTCAGTGGAAAGAGTCCCAGACGAAGGTGAAGACTCTAGTGCCACGCGACCTCAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGTTTGATGTCAACCACCCACGATAGCACCATTTCAGTAGATAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAGGAGAAAATTATGGATTTTGGTGATAAAAGTGCCCAAAATGAAGCCATTCAAGCCCAATTTCTATGCTTCGGTCAAGGGGAGTCAAAAGAGGACAACTATGAAGAAAAAGCCCAAAAAGAATTGAAGTTGGCCAAAGAAAAGAAGCCCAATCCGCAGCTGGAAATTCTGGTTGGCTTGCAAGTCGTTGACGTCACAGCGTCGCGACGTTGTGCCGTATAG MSQSESPKVNNGREDPKEMKLAQVSSPNPCGLFWKPHSVDFLVGKLMTSQRCDAVPLAPSPHSEEGQAEATKEQPADEVLEPLFKDDPPTADSTSSGEKRDEEDKASNEVETCSDSETESDLEIKELDDDQVPISVALRRKRRREIKAERRTKNKNDRIFAKRPRTRSMDASPAAPPTISPAKSKAKSPEAASPKNPFPEESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPRDLKPESAVWLHFLKNRLMSTTHDSTISVDRVMLLYCIMKGLEEKIMDFGDKSAQNEAIQAQFLCFGQGESKEDNYEEKAQKELKLAKEKKPNPQLEILVGLQVVDVTASRRCAV Homology
BLAST of Spg015384 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 93.2 bits (230), Expect = 5.3e-15 Identity = 42/108 (38.89%), Postives = 70/108 (64.81%), Query Frame = 0
BLAST of Spg015384 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 7.1e-12 Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 0
BLAST of Spg015384 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 80.1 bits (196), Expect = 4.6e-11 Identity = 68/229 (29.69%), Postives = 118/229 (51.53%), Query Frame = 0
BLAST of Spg015384 vs. NCBI nr
Match: KAA0041264.1 (hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK16063.1 hypothetical protein E5676_scaffold32G00800 [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 6.7e-10 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Spg015384 vs. NCBI nr
Match: KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa]) HSP 1 Score: 73.2 bits (178), Expect = 5.6e-09 Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 0
BLAST of Spg015384 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.5e-12 Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 0
BLAST of Spg015384 vs. ExPASy TrEMBL
Match: A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.2e-10 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Spg015384 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.7e-09 Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 0
BLAST of Spg015384 vs. ExPASy TrEMBL
Match: A0A0A0L2P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G569710 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.6e-09 Identity = 35/90 (38.89%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Spg015384 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 4.7e-09 Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|