Spg015218 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015218
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGATA transcription factor 15-like
Locationscaffold3: 45115896 .. 45116396 (-)
RNA-Seq ExpressionSpg015218
SyntenySpg015218
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTCTTCGTGAACCACCCCAATCTCTCTGGCTCCACCTTCAATCCATCGCTAATGGCCATCTCCAGCCAGGGTCTGGTCGGCATCGAGCCTCAGAAACAGAGGGCCTGCGTCGACTGTCGCACCACCAGAACCCCCCTCTGGAGAGCCGGTCCTGCCGGCCCAAGGGTAACTATTTTGGTGATTAGAAATTTGGTTTAAAATGTTGTTGGTAATTTTGATCGATTTTTCTGGGTTTATTGTTGTTGACAGTCGCTGTGCAATGCATGTGGGATAAGATACAGGAAGCTGAAGAACAATGGCGGGGTGATCAAGAACGGGAAGGGGAAGAAAGTGGGAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCGACGGCGATGGCGGAAAATGGAGTTGCAGAGCCCATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTTTATCTTCCGGCTATGTATCATAA

mRNA sequence

ATGGCCTTCTTCGTGAACCACCCCAATCTCTCTGGCTCCACCTTCAATCCATCGCTAATGGCCATCTCCAGCCAGGGTCTGGTCGGCATCGAGCCTCAGAAACAGAGGGCCTGCGTCGACTGTCGCACCACCAGAACCCCCCTCTGGAGAGCCGGTCCTGCCGGCCCAAGGGTAACTATTTTGTCGCTGTGCAATGCATGTGGGATAAGATACAGGAAGCTGAAGAACAATGGCGGGGTGATCAAGAACGGGAAGGGGAAGAAAGTGGGAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCGACGGCGATGGCGGAAAATGGAGTTGCAGAGCCCATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTTTATCTTCCGGCTATGTATCATAA

Coding sequence (CDS)

ATGGCCTTCTTCGTGAACCACCCCAATCTCTCTGGCTCCACCTTCAATCCATCGCTAATGGCCATCTCCAGCCAGGGTCTGGTCGGCATCGAGCCTCAGAAACAGAGGGCCTGCGTCGACTGTCGCACCACCAGAACCCCCCTCTGGAGAGCCGGTCCTGCCGGCCCAAGGGTAACTATTTTGTCGCTGTGCAATGCATGTGGGATAAGATACAGGAAGCTGAAGAACAATGGCGGGGTGATCAAGAACGGGAAGGGGAAGAAAGTGGGAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCGACGGCGATGGCGGAAAATGGAGTTGCAGAGCCCATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTTTATCTTCCGGCTATGTATCATAA

Protein sequence

MAFFVNHPNLSGSTFNPSLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
Homology
[Close]
BLAST of Spg015218 vs. NCBI nr
Match: XP_022959984.1 (GATA transcription factor 15-like [Cucurbita moschata] >KAG6593223.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030201.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 115/146 (78.77%), Postives = 122/146 (83.56%), Query Frame = 0 

Query: 1   MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAFF+ NHP+LSGSTFNP SLMAIS+QGL+ IEPQKQR C  CRTTRTPLWRAGPAGPR 
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPR- 60

Query: 61  TILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAEN 120
              SLCNACGIRYRKLKN NGGV K+  GKKV      VRV+G GREI+LHRAT AMAEN
Sbjct: 61  ---SLCNACGIRYRKLKNSNGGVNKSVNGKKV------VRVVGLGREIMLHRATAAMAEN 120

Query: 121 GVAEPIGEEEQAAAMLLMALSSGYVS 143
           G AE IGEEEQAAAMLLMALSSGYVS
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]
BLAST of Spg015218 vs. NCBI nr
Match: XP_023004687.1 (GATA transcription factor 15-like [Cucurbita maxima])

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-47
Identity = 114/146 (78.08%), Postives = 121/146 (82.88%), Query Frame = 0 

Query: 1   MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAFF+ NHP+LSGSTFNP SLMAIS+QGL+  EPQKQR C  CRTTRTPLWRAGPAGPR 
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAGPR- 60

Query: 61  TILSLCNACGIRYRKLK-NNGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAEN 120
              SLCNACGIRYRKLK NNGGV K+G GKKV      VRV+G GREI+LHR T AMAEN
Sbjct: 61  ---SLCNACGIRYRKLKNNNGGVNKSGNGKKV------VRVVGLGREIMLHRTTAAMAEN 120

Query: 121 GVAEPIGEEEQAAAMLLMALSSGYVS 143
           G AE IGEEEQAAAMLLMALSSGYVS
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]
BLAST of Spg015218 vs. NCBI nr
Match: XP_023515141.1 (GATA transcription factor 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 4.3e-47
Identity = 114/146 (78.08%), Postives = 121/146 (82.88%), Query Frame = 0 

Query: 1   MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAFF+ NHP+LSGSTFNP SLMAIS+ GL+ IEPQKQR C  CRTTRTPLWRAGPAGPR 
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNHGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPR- 60

Query: 61  TILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAEN 120
              SLCNACGIRYRKLKN NGGV K+G GKKV      VRV+  GREI+LHRAT AMAEN
Sbjct: 61  ---SLCNACGIRYRKLKNSNGGVNKSGNGKKV------VRVVDLGREIMLHRATAAMAEN 120

Query: 121 GVAEPIGEEEQAAAMLLMALSSGYVS 143
           G AE IGEEEQAAAMLLMALSSGYVS
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]
BLAST of Spg015218 vs. NCBI nr
Match: KAA0046674.1 (GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA transcription factor 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-40
Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 0 

Query: 1   MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR 
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPR- 72

Query: 61  TILSLCNACGIRYRKLK---NNGGVIKN--------GKGKKV-GGGSLKVRVMGFGREIV 120
              SLCNACGIRYRK+K   NN G + N        GKGKK+ GGGSLK+RV+  GREI+
Sbjct: 73  ---SLCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGGGGSLKLRVVRLGREIM 132

Query: 121 LHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS 143
           +HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Sbjct: 133 VHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 166

[Close]
BLAST of Spg015218 vs. NCBI nr
Match: XP_008451515.1 (PREDICTED: GATA transcription factor 15-like [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-40
Identity = 105/162 (64.81%), Postives = 118/162 (72.84%), Query Frame = 0 

Query: 1   MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR 
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPR- 72

Query: 61  TILSLCNACGIRYRKLK---NNGGVIKN------------GKGKKV-GGGSLKVRVMGFG 120
              SLCNACGIRYRK+K   NN G + N            GKGKK+ GGGSLK+RV+  G
Sbjct: 73  ---SLCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMGGGGSLKLRVVRLG 132

Query: 121 REIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS 143
           REI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Sbjct: 133 REIMVHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 170

[Close]
BLAST of Spg015218 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-15
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 0 

Query: 34  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRK----LKNNGGVIKNGKGKKV 93
           ++++C  C T++TPLWR GPAGP+    SLCNACGIR RK    L +N    K  K    
Sbjct: 39  EKKSCAICGTSKTPLWRGGPAGPK----SLCNACGIRNRKKRRTLISNRSEDKKKKSHNR 98

Query: 94  G---GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALS 138
               G SLK R+M  GRE+++ R+T  AEN     +GEEEQ AA+LLMALS
Sbjct: 99  NPKFGDSLKQRLMELGREVMMQRST--AENQRRNKLGEEEQ-AAVLLMALS 142

[Close]
BLAST of Spg015218 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14
Identity = 57/116 (49.14%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 34  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK--VGG 93
           K++ C DC T++TPLWR GP GP+    SLCNACGIR RK K  GG   N K KK   GG
Sbjct: 34  KKKTCADCGTSKTPLWRGGPVGPK----SLCNACGIRNRK-KRRGGTEDNKKLKKSSSGG 93

Query: 94  G------SLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALSSGYV 142
           G      SLK  +M  G   +  R+T   +    + +GEEEQ AA+LLMALS G V
Sbjct: 94  GNRKFGESLKQSLMDLG---IRKRSTVEKQR---QKLGEEEQ-AAVLLMALSYGSV 137

[Close]
BLAST of Spg015218 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-09
Identity = 28/49 (57.14%), Postives = 32/49 (65.31%), Query Frame = 0 

Query: 36  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNG 85
           R C DC TT+TPLWR+GP GP+    SLCNACGIR RK +       NG
Sbjct: 176 RVCSDCNTTKTPLWRSGPCGPK----SLCNACGIRQRKARRAMAAAANG 220

[Close]
BLAST of Spg015218 vs. ExPASy Swiss-Prot
Match: Q5HZ36 (GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 36  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK 76
           R C DC TT+TPLWR+GP GP+    SLCNACGIR RK +
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPK----SLCNACGIRQRKAR 265

[Close]
BLAST of Spg015218 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 35 QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK 89
          +R CVDC T RTPLWR GPAGP+    SLCNACGI+ RK +     +++ + KK
Sbjct: 41 KRTCVDCGTIRTPLWRGGPAGPK----SLCNACGIKSRKKRQAALGMRSEEKKK 90

[Close]
BLAST of Spg015218 vs. ExPASy TrEMBL
Match: A0A6J1KR45 (GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.3e-48
Identity = 114/146 (78.08%), Postives = 121/146 (82.88%), Query Frame = 0 

Query: 1   MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAFF+ NHP+LSGSTFNP SLMAIS+QGL+  EPQKQR C  CRTTRTPLWRAGPAGPR 
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAGPR- 60

Query: 61  TILSLCNACGIRYRKLK-NNGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAEN 120
              SLCNACGIRYRKLK NNGGV K+G GKKV      VRV+G GREI+LHR T AMAEN
Sbjct: 61  ---SLCNACGIRYRKLKNNNGGVNKSGNGKKV------VRVVGLGREIMLHRTTAAMAEN 120

Query: 121 GVAEPIGEEEQAAAMLLMALSSGYVS 143
           G AE IGEEEQAAAMLLMALSSGYVS
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]
BLAST of Spg015218 vs. ExPASy TrEMBL
Match: A0A6J1H9M3 (GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.3e-48
Identity = 115/146 (78.77%), Postives = 122/146 (83.56%), Query Frame = 0 

Query: 1   MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAFF+ NHP+LSGSTFNP SLMAIS+QGL+ IEPQKQR C  CRTTRTPLWRAGPAGPR 
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPR- 60

Query: 61  TILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAEN 120
              SLCNACGIRYRKLKN NGGV K+  GKKV      VRV+G GREI+LHRAT AMAEN
Sbjct: 61  ---SLCNACGIRYRKLKNSNGGVNKSVNGKKV------VRVVGLGREIMLHRATAAMAEN 120

Query: 121 GVAEPIGEEEQAAAMLLMALSSGYVS 143
           G AE IGEEEQAAAMLLMALSSGYVS
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]
BLAST of Spg015218 vs. ExPASy TrEMBL
Match: A0A5A7TUD0 (GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001480 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.9e-41
Identity = 105/158 (66.46%), Postives = 118/158 (74.68%), Query Frame = 0 

Query: 1   MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR 
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPR- 72

Query: 61  TILSLCNACGIRYRKLK---NNGGVIKN--------GKGKKV-GGGSLKVRVMGFGREIV 120
              SLCNACGIRYRK+K   NN G + N        GKGKK+ GGGSLK+RV+  GREI+
Sbjct: 73  ---SLCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGGGGSLKLRVVRLGREIM 132

Query: 121 LHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS 143
           +HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Sbjct: 133 VHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 166

[Close]
BLAST of Spg015218 vs. ExPASy TrEMBL
Match: A0A1S3BSR7 (GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-40
Identity = 105/162 (64.81%), Postives = 118/162 (72.84%), Query Frame = 0 

Query: 1   MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRV 60
           MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR 
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPR- 72

Query: 61  TILSLCNACGIRYRKLK---NNGGVIKN------------GKGKKV-GGGSLKVRVMGFG 120
              SLCNACGIRYRK+K   NN G + N            GKGKK+ GGGSLK+RV+  G
Sbjct: 73  ---SLCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMGGGGSLKLRVVRLG 132

Query: 121 REIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS 143
           REI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Sbjct: 133 REIMVHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 170

[Close]
BLAST of Spg015218 vs. ExPASy TrEMBL
Match: A0A0A0K6B1 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.0e-38
Identity = 103/157 (65.61%), Postives = 117/157 (74.52%), Query Frame = 0 

Query: 1   MAFFVNH-PNLSGSTFN-PSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPR 60
           +AF +N   +LS STFN PSLM A+S +GL+ +E +KQRACV CR TRTPLWRAGPAGPR
Sbjct: 17  IAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHCRATRTPLWRAGPAGPR 76

Query: 61  VTILSLCNACGIRYRKLK----NNGGVIKN-----GKGKKVG--GGSLKVRVMGFGREIV 120
               SLCNACGIRYRK+K    NNGGV  N     GKGKK+G  GGSLKVRV+  GREI+
Sbjct: 77  ----SLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSLKVRVVRLGREIM 136

Query: 121 LHRATAMAE--NGVAEPIGEEEQAAAMLLMALSSGYV 142
           +HR T   E  N VAE IGEEEQ AA+LLMALSSGYV
Sbjct: 137 VHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 169

[Close]
BLAST of Spg015218 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 0 

Query: 34  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRK----LKNNGGVIKNGKGKKV 93
           ++++C  C T++TPLWR GPAGP+    SLCNACGIR RK    L +N    K  K    
Sbjct: 39  EKKSCAICGTSKTPLWRGGPAGPK----SLCNACGIRNRKKRRTLISNRSEDKKKKSHNR 98

Query: 94  G---GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALS 138
               G SLK R+M  GRE+++ R+T  AEN     +GEEEQ AA+LLMALS
Sbjct: 99  NPKFGDSLKQRLMELGREVMMQRST--AENQRRNKLGEEEQ-AAVLLMALS 142

[Close]
BLAST of Spg015218 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15
Identity = 57/116 (49.14%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 34  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK--VGG 93
           K++ C DC T++TPLWR GP GP+    SLCNACGIR RK K  GG   N K KK   GG
Sbjct: 34  KKKTCADCGTSKTPLWRGGPVGPK----SLCNACGIRNRK-KRRGGTEDNKKLKKSSSGG 93

Query: 94  G------SLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALSSGYV 142
           G      SLK  +M  G   +  R+T   +    + +GEEEQ AA+LLMALS G V
Sbjct: 94  GNRKFGESLKQSLMDLG---IRKRSTVEKQR---QKLGEEEQ-AAVLLMALSYGSV 137

[Close]
BLAST of Spg015218 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 53/167 (31.74%), Postives = 75/167 (44.91%), Query Frame = 0 

Query: 35  QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK------------------N 94
           ++ CVDC T+RTPLWR GPAGP+    SLCNACGI+ RK +                  N
Sbjct: 36  KKTCVDCGTSRTPLWRGGPAGPK----SLCNACGIKSRKKRQAALGIRQDDIKIKSKSNN 95

Query: 95  NGGV----IKNGKGKKVG-------GGSLKV----------------------------- 140
           N G+    +K GKG+ V         G +K+                             
Sbjct: 96  NLGLESRNVKTGKGEPVNVKIAKCEPGIVKIAKGEPGNVKNKIKRDPENSSSSNNNKKNV 155

[Close]
BLAST of Spg015218 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 60.8 bits (146), Expect = 9.9e-10
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 36  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK 76
           R C DC TT+TPLWR+GP GP+    SLCNACGIR RK +
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPK----SLCNACGIRQRKAR 265

[Close]
BLAST of Spg015218 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 35 QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK 89
          +R CVDC T RTPLWR GPAGP+    SLCNACGI+ RK +     +++ + KK
Sbjct: 41 KRTCVDCGTIRTPLWRGGPAGPK----SLCNACGIKSRKKRQAALGMRSEEKKK 90

The following BLAST results are available for this feature:
BLAST of Spg015218 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959984.11.9e-4778.77GATA transcription factor 15-like [Cucurbita moschata] >KAG6593223.1 GATA transc... [more]
XP_023004687.11.9e-4778.08GATA transcription factor 15-like [Cucurbita maxima][more]
XP_023515141.14.3e-4778.08GATA transcription factor 15-like [Cucurbita pepo subsp. pepo][more]
KAA0046674.11.0e-4066.46GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA tr... [more]
XP_008451515.13.0e-4064.81PREDICTED: GATA transcription factor 15-like [Cucumis melo][more]
BLAST of Spg015218 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LG101.5e-1549.55GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2[more]
Q9FJ102.2e-1449.14GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1[more]
Q6YW484.8e-0957.14Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ... [more]
Q5HZ361.4e-0865.00GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2[more]
Q9LIB51.8e-0853.70GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1[more]
BLAST of Spg015218 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KR459.3e-4878.08GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE... [more]
A0A6J1H9M39.3e-4878.77GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 ... [more]
A0A5A7TUD04.9e-4166.46GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BSR71.4e-4064.81GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 S... [more]
A0A0A0K6B11.0e-3865.61GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 P... [more]
BLAST of Spg015218 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G06740.11.1e-1649.55GATA transcription factor 15 [more]
AT5G49300.11.6e-1549.14GATA transcription factor 16 [more]
AT4G16141.12.0e-1031.74GATA type zinc finger transcription factor family protein [more]
AT5G56860.19.9e-1065.00GATA type zinc finger transcription factor family protein [more]
AT3G16870.11.3e-0953.70GATA transcription factor 17 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 32..87
e-value: 3.3E-9
score: 46.6
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 38..74
e-value: 2.7E-13
score: 49.3
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 32..72
score: 11.740725
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 37..73
e-value: 1.30263E-12
score: 56.6122
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 33..117
e-value: 4.9E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR47172OS01G0976800 PROTEINcoord: 33..141
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 32..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015218.1Spg015218.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding