Spg015194 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGGAAGCAAAAATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGCCGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTTCCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGGTTTGTTGGTTCTTTCAATGTTCTCTTATCTGCTTGATTGAGTTCTTATTTGGCTGTTTCGATTCTATCTATTAAGTCTATCTGGTTTAAGAATTAGGGTTCATAAAGTAACCATTTGAAGGGAACCAGTGTTGTGGATATTAATTGTCATTGCATTTTTTTCTCCTCTGCTTCTTGTACAATTTGAATAGAAAGGACATTCTGGACATTTACTGCTTGTATGTAGCTAGGATAACAGTACATTGTTTCTTGGGGAAATGAAATTCGTCTGTTGAAACTTAATCTTCAATTGCTATTGTGGAGAAGTTTTTGGTTGATCAACTGCAAGGGAATGGAAAATGTTTGTATTTAAAACTAGTTTACATTGTAAAAAATACCTCTTTGTAACTATGGGGTTGGTTTCAATTATACCCTGAACTTTCAAAAGTTTTATTTTAACCATTGAAGTTTGAAGTTTGTTTCAAAACAATCCTCGAAGACATTTTCCGTTAAATTTATTGATAAAAAATGATGTGTTTGCATTTGTTTTTATTGTTTTTTCCACTTATGTGTTCATATCTATTCACCTAAGCAACAATACACATGCAAATACGTCATTTTTTGTCCATGAATTTAACGAAAAAAAACATTCAAGGGTCATTTTGAAACAAACTTCAAATTTCAAAGGCTAAAATAAAACTTTTGAAAGTTCAGGGTATAATTGAAACAAGTCCCATAGTTCTAGGTATTTTTGATAATTTAACCTTAAAGCTATGGAGTGGATGAACTGTTTTCCAAATGGACTATTCGTTGAGACTTGCTCCTAATCCATCATATTGATTAATTGATCATAGATTGAATTTGTTGATAGATAAGGAAGGGCTCTTTCCATTTTGTCAGTGAGGAGAGAATCTCAGAAATCATATGGTTAAGCATTTGCGTTCTACTTCTATATAATACCCATCCCTTAGTTTTTAAATTCACTAAAGCTACAATAATTTTTGTGTCCTTATGTTGTCATATTGCACTTCATTCATTTTCTGTCTGAGAAGTTTAGTTTATGAAGCAAATATTGATGTTTCTAGTTGATTCGTTTTCTTGTAATTATCTTTAGTTTTTTGTTTTAGTTTGGCTCCTTTTGTGTAGGGTTTTTTTTTAGGCCTTTAGTATTATTTCAATTGTTTCCCACTCAATAAAAAGGAAAAAAAGGAAAAAAAAGAAAAAGAAAAAACACAGTGGCATTTCTCGTTGACTAATGGCTTCAATTTCTGTGTTCTTTCTCATTTCCATGTTGAATATTAGAAAATCCTAGAACCAAACTAAAATAAAACAAATTGAACCATTGGATACAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGGTACTAGTAAATGAGTTGGCATTCTTGATCTTTGCTCAAAAAAAGGTTTAGTATTCTATTCCAAGGCCCCTCTTAAATTTGAATACTTGTATTTATGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGATCTGAAGTAGGACTCACATCTAGCAAGTTTGTTGTGGAGGGAAAGATTTTGAGTTCCAATCCCATGTAAGTTGTGACCTCCTTGGGCAAGTTTGTTCCTTGGGAGACTTTCTTTCTCCTTTAAATACCATTCTAAATCTTGTAGTTCCACTAGTTTTCATTTAATTCATTAATATAGAGATTTTATTCTGCTCTGACTTCACTGATTTAGAGTTGAATCAAGATTATAGTGTGTGTGTGAGTTTGTAGGAGAAGCCAAACCAAGTAAGATAGAACATTAGAG ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGCCGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTTCCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGA ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGCCGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTTCCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGA MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF Homology
BLAST of Spg015194 vs. NCBI nr
Match: XP_004148536.1 (uncharacterized protein LOC101213060 [Cucumis sativus] >KGN43169.1 hypothetical protein Csa_020174 [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 9.3e-110 Identity = 227/285 (79.65%), Postives = 254/285 (89.12%), Query Frame = 0
BLAST of Spg015194 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407.1 bits (1045), Expect = 1.2e-109 Identity = 237/292 (81.16%), Postives = 260/292 (89.04%), Query Frame = 0
BLAST of Spg015194 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima]) HSP 1 Score: 406.0 bits (1042), Expect = 2.7e-109 Identity = 237/292 (81.16%), Postives = 259/292 (88.70%), Query Frame = 0
BLAST of Spg015194 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-108 Identity = 237/298 (79.53%), Postives = 261/298 (87.58%), Query Frame = 0
BLAST of Spg015194 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]) HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-107 Identity = 227/290 (78.28%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.2e-08 Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05 Identity = 28/90 (31.11%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05 Identity = 28/90 (31.11%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05 Identity = 28/90 (31.11%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P71376 (RNA-binding protein HI_1333 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1333 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 9.4e-04 Identity = 26/90 (28.89%), Postives = 47/90 (52.22%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 4.5e-110 Identity = 227/285 (79.65%), Postives = 254/285 (89.12%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109 Identity = 237/292 (81.16%), Postives = 259/292 (88.70%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 5.5e-108 Identity = 227/290 (78.28%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 6.0e-70 Identity = 153/187 (81.82%), Postives = 167/187 (89.30%), Query Frame = 0
BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 4.3e-68 Identity = 139/162 (85.80%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Spg015194 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 144.4 bits (363), Expect = 1.4e-34 Identity = 121/298 (40.60%), Postives = 166/298 (55.70%), Query Frame = 0
BLAST of Spg015194 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 143.3 bits (360), Expect = 3.1e-34 Identity = 113/267 (42.32%), Postives = 156/267 (58.43%), Query Frame = 0
BLAST of Spg015194 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 130.2 bits (326), Expect = 2.7e-30 Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|