Spg015194 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015194
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCRM domain-containing protein
Locationscaffold3: 33562744 .. 33565330 (-)
RNA-Seq ExpressionSpg015194
SyntenySpg015194
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGGAAGCAAAAATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGCCGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTTCCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGGTTTGTTGGTTCTTTCAATGTTCTCTTATCTGCTTGATTGAGTTCTTATTTGGCTGTTTCGATTCTATCTATTAAGTCTATCTGGTTTAAGAATTAGGGTTCATAAAGTAACCATTTGAAGGGAACCAGTGTTGTGGATATTAATTGTCATTGCATTTTTTTCTCCTCTGCTTCTTGTACAATTTGAATAGAAAGGACATTCTGGACATTTACTGCTTGTATGTAGCTAGGATAACAGTACATTGTTTCTTGGGGAAATGAAATTCGTCTGTTGAAACTTAATCTTCAATTGCTATTGTGGAGAAGTTTTTGGTTGATCAACTGCAAGGGAATGGAAAATGTTTGTATTTAAAACTAGTTTACATTGTAAAAAATACCTCTTTGTAACTATGGGGTTGGTTTCAATTATACCCTGAACTTTCAAAAGTTTTATTTTAACCATTGAAGTTTGAAGTTTGTTTCAAAACAATCCTCGAAGACATTTTCCGTTAAATTTATTGATAAAAAATGATGTGTTTGCATTTGTTTTTATTGTTTTTTCCACTTATGTGTTCATATCTATTCACCTAAGCAACAATACACATGCAAATACGTCATTTTTTGTCCATGAATTTAACGAAAAAAAACATTCAAGGGTCATTTTGAAACAAACTTCAAATTTCAAAGGCTAAAATAAAACTTTTGAAAGTTCAGGGTATAATTGAAACAAGTCCCATAGTTCTAGGTATTTTTGATAATTTAACCTTAAAGCTATGGAGTGGATGAACTGTTTTCCAAATGGACTATTCGTTGAGACTTGCTCCTAATCCATCATATTGATTAATTGATCATAGATTGAATTTGTTGATAGATAAGGAAGGGCTCTTTCCATTTTGTCAGTGAGGAGAGAATCTCAGAAATCATATGGTTAAGCATTTGCGTTCTACTTCTATATAATACCCATCCCTTAGTTTTTAAATTCACTAAAGCTACAATAATTTTTGTGTCCTTATGTTGTCATATTGCACTTCATTCATTTTCTGTCTGAGAAGTTTAGTTTATGAAGCAAATATTGATGTTTCTAGTTGATTCGTTTTCTTGTAATTATCTTTAGTTTTTTGTTTTAGTTTGGCTCCTTTTGTGTAGGGTTTTTTTTTAGGCCTTTAGTATTATTTCAATTGTTTCCCACTCAATAAAAAGGAAAAAAAGGAAAAAAAAGAAAAAGAAAAAACACAGTGGCATTTCTCGTTGACTAATGGCTTCAATTTCTGTGTTCTTTCTCATTTCCATGTTGAATATTAGAAAATCCTAGAACCAAACTAAAATAAAACAAATTGAACCATTGGATACAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGGTACTAGTAAATGAGTTGGCATTCTTGATCTTTGCTCAAAAAAAGGTTTAGTATTCTATTCCAAGGCCCCTCTTAAATTTGAATACTTGTATTTATGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGATCTGAAGTAGGACTCACATCTAGCAAGTTTGTTGTGGAGGGAAAGATTTTGAGTTCCAATCCCATGTAAGTTGTGACCTCCTTGGGCAAGTTTGTTCCTTGGGAGACTTTCTTTCTCCTTTAAATACCATTCTAAATCTTGTAGTTCCACTAGTTTTCATTTAATTCATTAATATAGAGATTTTATTCTGCTCTGACTTCACTGATTTAGAGTTGAATCAAGATTATAGTGTGTGTGTGAGTTTGTAGGAGAAGCCAAACCAAGTAAGATAGAACATTAGAG

mRNA sequence

ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGCCGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTTCCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGA

Coding sequence (CDS)

ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGCCGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTTCCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCTAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGA

Protein sequence

MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
Homology
BLAST of Spg015194 vs. NCBI nr
Match: XP_004148536.1 (uncharacterized protein LOC101213060 [Cucumis sativus] >KGN43169.1 hypothetical protein Csa_020174 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 9.3e-110
Identity = 227/285 (79.65%), Postives = 254/285 (89.12%), Query Frame = 0

Query: 1   MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQS 60
           MGASI+SSHSHSLLLRS+PSSFST FSKPS     AAA IST CFHQFKP++S  LTR+S
Sbjct: 1   MGASIISSHSHSLLLRSLPSSFSTFFSKPS-----AAAAISTVCFHQFKPSSSTLLTRES 60

Query: 61  PYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFELEEA 120
           P+  R FTPSA +SF+RSFSST+SDPSEV FDEADDEIED+D+SDYEDEVE+ED      
Sbjct: 61  PHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEMED-----E 120

Query: 121 VGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTP 180
           VGDG +T VASE  S +++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTP
Sbjct: 121 VGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTP 180

Query: 181 GLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSK 240
           GLATSFIETLEANELLKIK+LGNCP ELEDVVR+L ESTGSVVVNQIGRTVIIYRPS++K
Sbjct: 181 GLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITK 240

Query: 241 MKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSR 286
           MKAEEEKRRARK+Y+RKEPDRVKSILQ K++TP SSNRGRRG+SR
Sbjct: 241 MKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR 275

BLAST of Spg015194 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 407.1 bits (1045), Expect = 1.2e-109
Identity = 237/292 (81.16%), Postives = 260/292 (89.04%), Query Frame = 0

Query: 1   MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIF 60
           MGASIMSS S     HSLLLRSVPSS ST   +PS       AVIS +C HQFKPN+SIF
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPS-------AVISAACSHQFKPNSSIF 60

Query: 61  LTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDF 120
           L RQSP+RSRSFTPSASVSF+RSFSST+SD S VGF++ DD I+D+++SDYEDEVEIEDF
Sbjct: 61  LIRQSPHRSRSFTPSASVSFSRSFSSTISDTSAVGFED-DDVIDDDEESDYEDEVEIEDF 120

Query: 121 ELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVG 180
           ELE+  V DGL+T+VAS+S S+VV+ SEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVG
Sbjct: 121 ELEDNTVEDGLETAVASDSSSAVVSISEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVG 180

Query: 181 KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIY 240
           KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIY
Sbjct: 181 KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIY 240

Query: 241 RPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF 287
           RPS+SKMKAEEEKRRARK+YVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Sbjct: 241 RPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

BLAST of Spg015194 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima])

HSP 1 Score: 406.0 bits (1042), Expect = 2.7e-109
Identity = 237/292 (81.16%), Postives = 259/292 (88.70%), Query Frame = 0

Query: 1   MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIF 60
           MGASIMSS S     HSLLLRSVPSS ST   +PS       AVIS +C HQFKPN+SIF
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPS-------AVISAACSHQFKPNSSIF 60

Query: 61  LTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDF 120
           L RQSP+RSRSFTPSASVSF+RSFSS +S  S VGF++ DD I+D+D+SDYEDEVEIEDF
Sbjct: 61  LIRQSPHRSRSFTPSASVSFSRSFSSIISGTSAVGFED-DDVIDDDDESDYEDEVEIEDF 120

Query: 121 ELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVG 180
           ELE+  V DGL+T+VAS+S S+VV+RSEVK+IPSLTVKEKKELASYAHSLGKKLKSQLVG
Sbjct: 121 ELEDNTVEDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVG 180

Query: 181 KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIY 240
           KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIY
Sbjct: 181 KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIY 240

Query: 241 RPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF 287
           RPS+SKMKAEEEKRRARKIYVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Sbjct: 241 RPSISKMKAEEEKRRARKIYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

BLAST of Spg015194 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-108
Identity = 237/298 (79.53%), Postives = 261/298 (87.58%), Query Frame = 0

Query: 1   MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIF 60
           MGASIMSS S     HSLLLRSVPSS ST  S+PS       A IS +C HQFKPN+SIF
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPS-------AAISAACSHQFKPNSSIF 60

Query: 61  LTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDY------EDE 120
           L RQSP+RSRSF+PSASVSF+RSFSST+SD S VGF++ DD I+D+D+SDY      EDE
Sbjct: 61  LIRQSPHRSRSFSPSASVSFSRSFSSTISDTSAVGFED-DDVIDDDDESDYEDEVEIEDE 120

Query: 121 VEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKL 180
           VEIEDFELE+  V DGL+T+VAS+S S+VV+RSEVKNIPSLTVKEKKELASYAHSLGKKL
Sbjct: 121 VEIEDFELEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKL 180

Query: 181 KSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIG 240
           KSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVV+QLEESTGSVVV++IG
Sbjct: 181 KSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIG 240

Query: 241 RTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF 287
           RTVIIYRPS+SKMKAEEEKRRARK+YVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Sbjct: 241 RTVIIYRPSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 290

BLAST of Spg015194 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-107
Identity = 227/290 (78.28%), Postives = 253/290 (87.24%), Query Frame = 0

Query: 1   MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFL 60
           M ASI+S    SHSHSLLLRSVPSSFST FSKPSAT     A  ST CFHQFKP++S FL
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSAT-----AAFSTVCFHQFKPSSSTFL 60

Query: 61  TRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFE 120
           TR+SP+ SR FTPS S+SF+R FSSTVS PSEV FDE DDEIED+D+SDYEDEVE+ED  
Sbjct: 61  TRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMED-- 120

Query: 121 LEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
              +VGDG +  VASE  S V+NR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKS
Sbjct: 121 ---SVGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRP 240
           GVTPGLATSFIETLEANELLKIK+LGNCP +LEDVVR+LEESTGSVVVNQIGRTVIIYRP
Sbjct: 181 GVTPGLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRP 240

Query: 241 SVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF 287
           S++KMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP SSNRGRRG+SR+
Sbjct: 241 SITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY 280

BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.2e-08
Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 0

Query: 149 LTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGEL 208
           LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ VL NC  + 
Sbjct: 2   LTGKQKRFLRSKAHHLTPIFQ---VGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDK 61

Query: 209 EDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAE 245
            DV   L + + S +V  IG T+++Y+ S    + E
Sbjct: 62  NDVAEALVKGSRSQLVQTIGNTIVLYKESKENKQIE 94

BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 28/90 (31.11%), Postives = 50/90 (55.56%), Query Frame = 0

Query: 148 SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGE 207
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 208 LEDVVRQLEESTGSVVVNQIGRTVIIYRPS 238
              +V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 28/90 (31.11%), Postives = 50/90 (55.56%), Query Frame = 0

Query: 148 SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGE 207
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 208 LEDVVRQLEESTGSVVVNQIGRTVIIYRPS 238
              +V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 28/90 (31.11%), Postives = 50/90 (55.56%), Query Frame = 0

Query: 148 SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGE 207
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 208 LEDVVRQLEESTGSVVVNQIGRTVIIYRPS 238
              +V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of Spg015194 vs. ExPASy Swiss-Prot
Match: P71376 (RNA-binding protein HI_1333 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1333 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 9.4e-04
Identity = 26/90 (28.89%), Postives = 47/90 (52.22%), Query Frame = 0

Query: 148 SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGE 207
           +L+ K+K+ L   AH L   +   ++G +G+T G+       L  +EL+K+KV G     
Sbjct: 3   TLSTKQKQFLKGLAHHLNPVV---MLGGNGLTEGVLAEIENALNHHELIKVKVAGADRET 62

Query: 208 LEDVVRQLEESTGSVVVNQIGRTVIIYRPS 238
            + ++  +   T +  V  IG  +++YRPS
Sbjct: 63  KQLIINAIVRETKAAQVQTIGHILVLYRPS 89

BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.5e-110
Identity = 227/285 (79.65%), Postives = 254/285 (89.12%), Query Frame = 0

Query: 1   MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQS 60
           MGASI+SSHSHSLLLRS+PSSFST FSKPS     AAA IST CFHQFKP++S  LTR+S
Sbjct: 1   MGASIISSHSHSLLLRSLPSSFSTFFSKPS-----AAAAISTVCFHQFKPSSSTLLTRES 60

Query: 61  PYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFELEEA 120
           P+  R FTPSA +SF+RSFSST+SDPSEV FDEADDEIED+D+SDYEDEVE+ED      
Sbjct: 61  PHHYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEMED-----E 120

Query: 121 VGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTP 180
           VGDG +T VASE  S +++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTP
Sbjct: 121 VGDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTP 180

Query: 181 GLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSK 240
           GLATSFIETLEANELLKIK+LGNCP ELEDVVR+L ESTGSVVVNQIGRTVIIYRPS++K
Sbjct: 181 GLATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITK 240

Query: 241 MKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSR 286
           MKAEEEKRRARK+Y+RKEPDRVKSILQ K++TP SSNRGRRG+SR
Sbjct: 241 MKAEEEKRRARKVYMRKEPDRVKSILQKKIETPQSSNRGRRGTSR 275

BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 237/292 (81.16%), Postives = 259/292 (88.70%), Query Frame = 0

Query: 1   MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIF 60
           MGASIMSS S     HSLLLRSVPSS ST   +PS       AVIS +C HQFKPN+SIF
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPS-------AVISAACSHQFKPNSSIF 60

Query: 61  LTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDF 120
           L RQSP+RSRSFTPSASVSF+RSFSS +S  S VGF++ DD I+D+D+SDYEDEVEIEDF
Sbjct: 61  LIRQSPHRSRSFTPSASVSFSRSFSSIISGTSAVGFED-DDVIDDDDESDYEDEVEIEDF 120

Query: 121 ELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVG 180
           ELE+  V DGL+T+VAS+S S+VV+RSEVK+IPSLTVKEKKELASYAHSLGKKLKSQLVG
Sbjct: 121 ELEDNTVEDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVG 180

Query: 181 KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIY 240
           KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIY
Sbjct: 181 KSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIY 240

Query: 241 RPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF 287
           RPS+SKMKAEEEKRRARKIYVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Sbjct: 241 RPSISKMKAEEEKRRARKIYVRKEPDRVKLFLQNKVQTPRSSNRGRRGSSRF 284

BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 5.5e-108
Identity = 227/290 (78.28%), Postives = 253/290 (87.24%), Query Frame = 0

Query: 1   MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFL 60
           M ASI+S    SHSHSLLLRSVPSSFST FSKPSAT     A  ST CFHQFKP++S FL
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSAT-----AAFSTVCFHQFKPSSSTFL 60

Query: 61  TRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFE 120
           TR+SP+ SR FTPS S+SF+R FSSTVS PSEV FDE DDEIED+D+SDYEDEVE+ED  
Sbjct: 61  TRKSPHYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEMED-- 120

Query: 121 LEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKS 180
              +VGDG +  VASE  S V+NR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKS
Sbjct: 121 ---SVGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKS 180

Query: 181 GVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRP 240
           GVTPGLATSFIETLEANELLKIK+LGNCP +LEDVVR+LEESTGSVVVNQIGRTVIIYRP
Sbjct: 181 GVTPGLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRP 240

Query: 241 SVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF 287
           S++KMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP SSNRGRRG+SR+
Sbjct: 241 SITKMKAEEEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY 280

BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 6.0e-70
Identity = 153/187 (81.82%), Postives = 167/187 (89.30%), Query Frame = 0

Query: 103 DSDYEDEVEIEDFEL-EEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYA 162
           DSDYE EV I DFEL EE++G   Q    S+  SSVVN SEVKN+PSLTVKEKKELASYA
Sbjct: 9   DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 68

Query: 163 HSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGS 222
           HSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+L NCP EL+D VRQLEESTGS
Sbjct: 69  HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 128

Query: 223 VVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPG--SSNRG 282
           VVV+QIGRTVIIYRPS+SKMKAEE+KR+ARKIYVRKEPDRVKSILQNK+QTPG  +SNRG
Sbjct: 129 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 188

Query: 283 RRGSSRF 287
           RRGSSRF
Sbjct: 189 RRGSSRF 195

BLAST of Spg015194 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 4.3e-68
Identity = 139/162 (85.80%), Postives = 154/162 (95.06%), Query Frame = 0

Query: 125 LQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLAT 184
           ++T VASE  S V+NR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLAT
Sbjct: 1   METGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLAT 60

Query: 185 SFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAE 244
           SFIETLEANELLKIK+LGNCP ELEDVVR+LEESTGSVVVNQIGRTVIIYRPS++KMKAE
Sbjct: 61  SFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE 120

Query: 245 EEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF 287
           EEKRR+RKIY+RKEPDRVKSILQ K++TP SSNRGRRG+SR+
Sbjct: 121 EEKRRSRKIYIRKEPDRVKSILQKKVETPRSSNRGRRGTSRY 162

BLAST of Spg015194 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-34
Identity = 121/298 (40.60%), Postives = 166/298 (55.70%), Query Frame = 0

Query: 3   ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSP 62
           AS  S+H  H+LL    P S   LF +P       +A +S S  H+ KP    F ++  P
Sbjct: 8   ASCSSTHLIHNLLRHPKPPSPVCLFLRP----FCFSASVSQS-NHRNKPRFQSFSSKPLP 67

Query: 63  YRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFELEEAV 122
             S S          +SFSS + +P     +E++DE    ++ +YEDE E ++ +    V
Sbjct: 68  CHSASLV-------VKSFSS-IDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVV 127

Query: 123 GD-GLQTSVASESPSSVVNRSEVK----------NIPSLTVKEKKELASYAHSLGKKLKS 182
            + G++ S ASE  S + ++ E            +   L++KEKKELASYAHSLG KLK 
Sbjct: 128 SERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKC 187

Query: 183 QLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRT 242
           QLVGKSGVT  +  SF+ETLE NELLK+K+    P ELED V+ LEE+TGSV V QIGRT
Sbjct: 188 QLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRT 247

Query: 243 VIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGS---SNRGRRGSSR 286
           VI+YRPS +KMKAE +K+   ++ + +      +      +   S     RGRRG SR
Sbjct: 248 VILYRPSPTKMKAEAKKKEVERMSITRRQKYANTRPTKPFRREYSERPDGRGRRGGSR 292

BLAST of Spg015194 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-34
Identity = 113/267 (42.32%), Postives = 156/267 (58.43%), Query Frame = 0

Query: 3   ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSP 62
           AS  S+H  H+LL    P S   LF +P       +A +S S  H+ KP    F ++  P
Sbjct: 8   ASCSSTHLIHNLLRHPKPPSPVCLFLRP----FCFSASVSQS-NHRNKPRFQSFSSKPLP 67

Query: 63  YRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEVEIEDFELEEAV 122
             S S          +SFSS + +P     +E++DE    ++ +YEDE E ++ +    V
Sbjct: 68  CHSASLV-------VKSFSS-IDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVV 127

Query: 123 GD-GLQTSVASESPSSVVNRSEVK----------NIPSLTVKEKKELASYAHSLGKKLKS 182
            + G++ S ASE  S + ++ E            +   L++KEKKELASYAHSLG KLK 
Sbjct: 128 SERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKC 187

Query: 183 QLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRT 242
           QLVGKSGVT  +  SF+ETLE NELLK+K+    P ELED V+ LEE+TGSV V QIGRT
Sbjct: 188 QLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRT 247

Query: 243 VIIYRPSVSKMKAEEEKRRARKIYVRK 258
           VI+YRPS +KMKAE +K+   ++ + +
Sbjct: 248 VILYRPSPTKMKAEAKKKEVERMSITR 261

BLAST of Spg015194 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-30
Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = 0

Query: 100 DEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELAS 159
           DE + D ED V +    L E   DG +    SE     +  +   +   L+ KEK++LAS
Sbjct: 74  DESEQD-EDNVSLV-ASLNEINDDGQED--GSELTMVSMRENRRSSALELSAKEKRKLAS 133

Query: 160 YAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEEST 219
           YAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+K+   CPGELED++ +LEE+T
Sbjct: 134 YAHHLGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPGELEDMILRLEEAT 193

Query: 220 GSVVVNQIGRTVIIYRPSVSKMKAEEEKRR 250
           GSV V QI RTVI+YRPS +K+KA+E+K+R
Sbjct: 194 GSVSVGQIARTVILYRPSPTKLKADEDKKR 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004148536.19.3e-11079.65uncharacterized protein LOC101213060 [Cucumis sativus] >KGN43169.1 hypothetical ... [more]
KAG6588422.11.2e-10981.16hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022971306.12.7e-10981.16uncharacterized protein LOC111470060 [Cucurbita maxima][more]
XP_023529380.12.3e-10879.53uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo][more]
XP_008448058.11.1e-10778.28PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo][more]
Match NameE-valueIdentityDescription
P544542.2e-0837.50Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN... [more]
P0AGK62.9e-0531.11RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1[more]
P0AGK52.9e-0531.11RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 ... [more]
P0AGK42.9e-0531.11RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 ... [more]
P713769.4e-0428.89RNA-binding protein HI_1333 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 1... [more]
Match NameE-valueIdentityDescription
A0A0A0K2C34.5e-11079.65CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV... [more]
A0A6J1I2Z31.3e-10981.16uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060... [more]
A0A1S3BJF75.5e-10878.28uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=... [more]
A0A6J1C4096.0e-7081.82uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A5D3DFJ14.3e-6885.80Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1... [more]
Match NameE-valueIdentityDescription
AT4G39040.11.4e-3440.60RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT4G39040.23.1e-3442.32RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT2G21350.12.7e-3053.33RNA-binding CRS1 / YhbY (CRM) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 149..235
e-value: 1.0E-22
score: 91.5
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 149..235
e-value: 9.6E-16
score: 57.7
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 147..246
score: 16.797123
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 148..247
e-value: 7.3E-28
score: 98.5
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 148..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..286
NoneNo IPR availablePANTHERPTHR47714:SF1CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 6..286
NoneNo IPR availablePANTHERPTHR47714CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 6..286

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015194.1Spg015194.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding