Spg015180 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015180
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	AAI domain-containing protein
Location	scaffold3: 46501386 .. 46501940 (-)
RNA-Seq Expression	Spg015180
Synteny	Spg015180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATACAGCTTCTTCATAGTTCATACCAACAAAACCCCATTATTTCTCTTCAGAATTCATTTCAGGTCAAATATGAATAAGGCCAGCTTCAAACCTCTGCAATTTCTGGTGTTCATGATGGCAATTGCATGCTTTCTGGAGCCAGGTAAAGCCAAGTTCTGTTCAAACAGTTTGATTTCCTCTCTTGTTCAGCTAATTCCTTGCAGGCCTGCACTGTCACCATTCCGCCCCACCCCACCAAGTCTTCTCTGTTGCAATGCCCTCAAAACTCTCGGCCAGCCCTGTCTCTGTGCAGTGTTGGATGCGCCCCCTGTTTCTGGTGTTGATTACAACTTGGCCATGTCGCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTAACTATTTTTCTTTCATCTCTCAACTAATTCTAGCGTTTTTTTGTATTGAGATTCTTGAAAAACTTCGTTTTGTTTTGGGTTTCTGATGCAGGTTTTTAGAACTTAGAAGTTGGAAGATGGTGGGGTGTGAAGATGATGAATAAAACTGCTTGTGATGTTTAGATATTACGGTT

mRNA sequence

GAATACAGCTTCTTCATAGTTCATACCAACAAAACCCCATTATTTCTCTTCAGAATTCATTTCAGGTCAAATATGAATAAGGCCAGCTTCAAACCTCTGCAATTTCTGGTGTTCATGATGGCAATTGCATGCTTTCTGGAGCCAGGTAAAGCCAAGTTCTGTTCAAACAGTTTGATTTCCTCTCTTGTTCAGCTAATTCCTTGCAGGCCTGCACTGTCACCATTCCGCCCCACCCCACCAAGTCTTCTCTGTTGCAATGCCCTCAAAACTCTCGGCCAGCCCTGTCTCTGTGCAGTGTTGGATGCGCCCCCTGTTTCTGGTGTTGATTACAACTTGGCCATGTCGCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTTTTTAG

Coding sequence (CDS)

GAATACAGCTTCTTCATAGTTCATACCAACAAAACCCCATTATTTCTCTTCAGAATTCATTTCAGGTCAAATATGAATAAGGCCAGCTTCAAACCTCTGCAATTTCTGGTGTTCATGATGGCAATTGCATGCTTTCTGGAGCCAGGTAAAGCCAAGTTCTGTTCAAACAGTTTGATTTCCTCTCTTGTTCAGCTAATTCCTTGCAGGCCTGCACTGTCACCATTCCGCCCCACCCCACCAAGTCTTCTCTGTTGCAATGCCCTCAAAACTCTCGGCCAGCCCTGTCTCTGTGCAGTGTTGGATGCGCCCCCTGTTTCTGGTGTTGATTACAACTTGGCCATGTCGCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTTTTTAG

Protein sequence

EYSFFIVHTNKTPLFLFRIHFRSNMNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLCCNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF

Homology

[Close]

BLAST of Spg015180 vs. NCBI nr
Match: XP_038900004.1 (non-specific lipid-transfer protein P5-like [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 5.9e-48
Identity = 94/104 (90.38%), Postives = 99/104 (95.19%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M +A+FKPLQFLVFMMAIACFLE GKAKFCSNSLISSLVQLIPCRPALSPF P PPS+LC
Sbjct: 1   MKQANFKPLQFLVFMMAIACFLEQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSILC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF 129
           CNA+KTLGQ CLCA+LDAPPVSGVDYNLAMSLPQKCATNFDPCF
Sbjct: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 104

[Close]

BLAST of Spg015180 vs. NCBI nr
Match: XP_023004704.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima] >KAG6593320.1 hypothetical protein SDJN03_12796, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-43
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M   SFKPLQFLVFM+A+ CF+EP KAKFCSNSLIS+LVQLIPC+P+LSPF P PPSLLC
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEPSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF 129
           C+ALKTLGQPCLCAVLDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

[Close]

BLAST of Spg015180 vs. NCBI nr
Match: KAG7025667.1 (hypothetical protein SDJN02_12165, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.1 bits (466), Expect = 7.5e-43
Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M   SFKPLQFLVFM+A+ CF+EP KAKFCSNSLIS+LVQLIPC+P+LSPF P PPSLLC
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEPSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPC 128
           C+ALKTLGQPCLCAVLDAPPVSG+DYN+AM LPQKCA NF PC
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPC 103

[Close]

BLAST of Spg015180 vs. NCBI nr
Match: XP_023514059.1 (putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M   SFKPLQFLVFM+A+ CF+E  KAKFCSNSLIS+LVQLIPC+P+LSPF P PPSLLC
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEQSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF 129
           C+ALKTLGQPCLCAVLDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

[Close]

BLAST of Spg015180 vs. NCBI nr
Match: XP_008461263.1 (PREDICTED: protein LIM1-like [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 5.4e-41
Identity = 82/104 (78.85%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M +A FKPL+FLVF++AIA FL  GKAKFCSNSLI SLVQL+PCRP+LSPF P PPS LC
Sbjct: 1   MKQAIFKPLEFLVFILAIASFLGQGKAKFCSNSLIYSLVQLLPCRPSLSPFHPIPPSPLC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF 129
           CNA++TLGQ C+CA+LDAPPVSGVDYNLAMSLPQKCA+NF+PCF
Sbjct: 61  CNAIETLGQSCICALLDAPPVSGVDYNLAMSLPQKCASNFEPCF 104

[Close]

BLAST of Spg015180 vs. ExPASy TrEMBL
Match: A0A6J1KX32 (putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111497920 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 7.3e-44
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M   SFKPLQFLVFM+A+ CF+EP KAKFCSNSLIS+LVQLIPC+P+LSPF P PPSLLC
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEPSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF 129
           C+ALKTLGQPCLCAVLDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

[Close]

BLAST of Spg015180 vs. ExPASy TrEMBL
Match: A0A1S3CEQ8 (protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41
Identity = 82/104 (78.85%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M +A FKPL+FLVF++AIA FL  GKAKFCSNSLI SLVQL+PCRP+LSPF P PPS LC
Sbjct: 1   MKQAIFKPLEFLVFILAIASFLGQGKAKFCSNSLIYSLVQLLPCRPSLSPFHPIPPSPLC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF 129
           CNA++TLGQ C+CA+LDAPPVSGVDYNLAMSLPQKCA+NF+PCF
Sbjct: 61  CNAIETLGQSCICALLDAPPVSGVDYNLAMSLPQKCASNFEPCF 104

[Close]

BLAST of Spg015180 vs. ExPASy TrEMBL
Match: A0A0A0K635 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41
Identity = 82/104 (78.85%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 25  MNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPSLLC 84
           M +A FKPL+FLVFM+AI  FL   KAKFCSNSLI SLVQLIPCRP+LSPF P PPSL+C
Sbjct: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60

Query: 85  CNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPCF 129
           C+A+KTLGQ C+CA+LDAPPVSGVDYNLAMSLPQKCA NF+PCF
Sbjct: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104

[Close]

BLAST of Spg015180 vs. ExPASy TrEMBL
Match: A0A2H5N9X8 (AAI domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_026130 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.3e-28
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 22  RSNMNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPS 81
           R NM  +  K L  L+ ++ +  F+E G +  C+N+ IS+LVQLIPCRPA+SPF P PPS
Sbjct: 30  RKNMKLSGTKALPILLLVLVMTSFMEQGNSHPCANTFISTLVQLIPCRPAVSPFSPIPPS 89

Query: 82  LLCCNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDPC 128
             CCNA+K LGQPCLC +++ PP++G+D N+A+ LP KC  NF+PC
Sbjct: 90  EACCNAIKALGQPCLCVLINGPPIAGIDRNVALQLPDKCIANFEPC 135

[Close]

BLAST of Spg015180 vs. ExPASy TrEMBL
Match: A0A2H5N9Y9 (AAI domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_026120 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.7e-27
Identity = 55/105 (52.38%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 22  RSNMNKASFKPLQFLVFMMAIACFLEPGKAKFCSNSLISSLVQLIPCRPALSPFRPTPPS 81
           R NM  +  K L  L+ ++ +  F+E G +  C+N+ IS+LVQLIPCRPA+SPF P PPS
Sbjct: 30  RKNMKLSGTKALPILLLVLVMTSFMEQGNSHPCANTFISTLVQLIPCRPAVSPFSPIPPS 89

Query: 82  LLCCNALKTLGQPCLCAVLDAPPVSGVDYNLAMSLPQKCATNFDP 127
             CCNA+K LGQPCLC +++ PP++G+D N+A+ LP KC  NF+P
Sbjct: 90  EACCNAIKALGQPCLCVLINGPPIAGIDRNVALQLPDKCIANFEP 134

[Close]

BLAST of Spg015180 vs. TAIR 10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 9.2e-23
Identity = 41/74 (55.41%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 54  CSNSLISSLVQLIPCRPALSPFRPTPPSLLCCNALKTLGQPCLCAVLDAPPVSGVDYNLA 113
           CS +  S+LVQLIPCR A++PF P PP+ +CC+A+ TLG+PCLC + + PP+SG+D ++A
Sbjct: 48  CSRTFFSALVQLIPCRAAVAPFSPIPPTEICCSAVVTLGRPCLCLLANGPPLSGIDRSMA 107

Query: 114 MSLPQKCATNFDPC 128
           + LPQ+C+ NF PC
Sbjct: 108 LQLPQRCSANFPPC 121

[Close]

BLAST of Spg015180 vs. TAIR 10
Match: AT3G07450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 7.8e-22
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 54  CSNSLISSLVQLIPCRPALSPFRPTPPSLLCCNALKTLGQPCLCAVLDAPPVSGVDYNLA 113
           C  + +S+L+QL+PCRP+++PF   PP+ LCC A+KTLGQPCLC +   PP+ GVD  LA
Sbjct: 32  CGRTFLSALIQLVPCRPSVAPFSTLPPNGLCCAAIKTLGQPCLCVLAKGPPIVGVDRTLA 91

Query: 114 MSLPQKCATNFDPC 128
           + LP KC+ NF PC
Sbjct: 92  LHLPGKCSANFLPC 105

[Close]

BLAST of Spg015180 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09
Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 64  QLIPCRPALSPFRPTPPSLLCCNALKTLGQPCLCAVLDAPPVS--GVDYNLAMSLPQKC- 123
           +L  C PA+S   PT PSLLCCNALK     CLC   ++P +   GVD  LA SLP++C 
Sbjct: 35  ELNECLPAVSKNNPTSPSLLCCNALKHADYTCLCGYKNSPWLGSFGVDPKLASSLPKECD 94

Query: 124 ATNFDPC 128
            TN   C
Sbjct: 95  LTNAPTC 101

The following BLAST results are available for this feature:

BLAST of Spg015180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900004.1	5.9e-48	90.38	non-specific lipid-transfer protein P5-like [Benincasa hispida]	[more]
XP_023004704.1	1.5e-43	81.73	putative lipid-transfer protein DIR1 [Cucurbita maxima] >KAG6593320.1 hypothetic...	[more]
KAG7025667.1	7.5e-43	81.55	hypothetical protein SDJN02_12165, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023514059.1	1.3e-42	80.77	putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo]	[more]
XP_008461263.1	5.4e-41	78.85	PREDICTED: protein LIM1-like [Cucumis melo]	[more]

BLAST of Spg015180 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg015180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KX32	7.3e-44	81.73	putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111497920...	[more]
A0A1S3CEQ8	2.6e-41	78.85	protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1	[more]
A0A0A0K635	4.4e-41	78.85	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV...	[more]
A0A2H5N9X8	4.3e-28	52.83	AAI domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_02613...	[more]
A0A2H5N9Y9	3.7e-27	52.38	AAI domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_02612...	[more]

BLAST of Spg015180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52130.1	9.2e-23	55.41	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G07450.1	7.8e-22	55.41	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G48490.1	3.4e-09	49.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 39..125 e-value: 2.5E-8 score: 34.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 52..127 e-value: 8.8E-12 score: 46.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 62..127
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 25..127
None	No IPR available	PANTHER	PTHR33122:SF33	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 25..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015180.1	Spg015180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding