Spg015176 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015176
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Adenine DNA glycosylase
Location	scaffold3: 41359808 .. 41360503 (+)
RNA-Seq Expression	Spg015176
Synteny	Spg015176

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAAATGTTTCTGCTCTGCCAAATTTGAACTTGTTAGCGATAATTGAAACGTAATCAGCGTAGAGGGACGGGTTGTTACAGTATGAGCGACGGAGAAAAGAACGAGAACGACGAGTATGTGAAGCAAAAGACTGATTTTCGTCAGAGAAAGAAACCCACGAAGGAACGAAAACGCCAGGGCCGAAGTCCGTCTGAAAGGGAAGCAGTTGACATTGAAGATATCATGTTCAGCATAGACAAAGTTCCGACGATCAGAGCATCGCTATTGGATTGGTACGACCGTAGCCGTAGGGACCTTCCTTGGAGGAGCTTGGACAAAGGACAGCCTGAAACACGGGCTTACGGCGTGTGGGTTTCAGAAGTAATGCTGCAGCAGACGAGAGTTCAGACCGTCGTTCAATTTTACAACCGTTGGATGCATAAATGGCCCACTGTTCAACATCTCTCTCGTGCTTCTCTCGAGGTTTGTTTAGAATTTACTTTCAGCTGCAATGCTGTCTTCTTTGCTCTTAGTGAAAAATTTAGATGTCTGCCAGGAGGTGAATGAAATGTGGGCAGGCTTGGGGTACTATAGACGAGCTCGTTTTCTTTTGGAGGTAATCTTTACTCGCTGCACTAAAGTTTCAATTCCATTTACATCTGCCACCATGATTGTTCTTCCTTCCAGTTTCGTTGGACATGATTTATGTTGA

mRNA sequence

ATGAGCGACGGAGAAAAGAACGAGAACGACGAGTATGTGAAGCAAAAGACTGATTTTCGTCAGAGAAAGAAACCCACGAAGGAACGAAAACGCCAGGGCCGAAGTCCGTCTGAAAGGGAAGCAGTTGACATTGAAGATATCATGTTCAGCATAGACAAAGTTCCGACGATCAGAGCATCGCTATTGGATTGGTACGACCGTAGCCGTAGGGACCTTCCTTGGAGGAGCTTGGACAAAGGACAGCCTGAAACACGGGCTTACGGCGTGTGGGTTTCAGAAGTAATGCTGCAGCAGACGAGAGTTCAGACCGTCGTTCAATTTTACAACCGTTGGATGCATAAATGGCCCACTGTTCAACATCTCTCTCGTGCTTCTCTCGAGGAGGTGAATGAAATGTGGGCAGGCTTGGGGTACTATAGACGAGCTCGTTTTCTTTTGGAGGTAATCTTTACTCGCTGCACTAAAGTTTCAATTCCATTTACATCTGCCACCATGATTGTTCTTCCTTCCAGTTTCGTTGGACATGATTTATGTTGA

Coding sequence (CDS)

ATGAGCGACGGAGAAAAGAACGAGAACGACGAGTATGTGAAGCAAAAGACTGATTTTCGTCAGAGAAAGAAACCCACGAAGGAACGAAAACGCCAGGGCCGAAGTCCGTCTGAAAGGGAAGCAGTTGACATTGAAGATATCATGTTCAGCATAGACAAAGTTCCGACGATCAGAGCATCGCTATTGGATTGGTACGACCGTAGCCGTAGGGACCTTCCTTGGAGGAGCTTGGACAAAGGACAGCCTGAAACACGGGCTTACGGCGTGTGGGTTTCAGAAGTAATGCTGCAGCAGACGAGAGTTCAGACCGTCGTTCAATTTTACAACCGTTGGATGCATAAATGGCCCACTGTTCAACATCTCTCTCGTGCTTCTCTCGAGGAGGTGAATGAAATGTGGGCAGGCTTGGGGTACTATAGACGAGCTCGTTTTCTTTTGGAGGTAATCTTTACTCGCTGCACTAAAGTTTCAATTCCATTTACATCTGCCACCATGATTGTTCTTCCTTCCAGTTTCGTTGGACATGATTTATGTTGA

Protein sequence

MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREAVDIEDIMFSIDKVPTIRASLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQHLSRASLEEVNEMWAGLGYYRRARFLLEVIFTRCTKVSIPFTSATMIVLPSSFVGHDLC

Homology

[Close]

BLAST of Spg015176 vs. NCBI nr
Match: XP_031743606.1 (adenine DNA glycosylase isoform X3 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 5.5e-68
Identity = 133/150 (88.67%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNENDEY+K+ TDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENDEYMKKNTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLEVI 150
           HLSRASLEEVNEMWAGLGYYRRARFL E+I
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFEMI 150

[Close]

BLAST of Spg015176 vs. NCBI nr
Match: XP_004140565.2 (adenine DNA glycosylase isoform X1 [Cucumis sativus] >XP_031743604.1 adenine DNA glycosylase isoform X1 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNENDEY+K+ TDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENDEYMKKNTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFE 148

[Close]

BLAST of Spg015176 vs. NCBI nr
Match: KGN46403.2 (hypothetical protein Csa_005328 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNENDEY+K+ TDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 519 MSDGEKNENDEYMKKNTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 578

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 579 SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 638

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 639 HLSRASLEEVNEMWAGLGYYRRARFLFE 666

[Close]

BLAST of Spg015176 vs. NCBI nr
Match: XP_031743608.1 (adenine DNA glycosylase isoform X5 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNENDEY+K+ TDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENDEYMKKNTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFE 148

[Close]

BLAST of Spg015176 vs. NCBI nr
Match: TYK24629.1 (adenine DNA glycosylase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 264.6 bits (675), Expect = 6.1e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNEN+E VK+KTDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENEENVKKKTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFE 148

[Close]

BLAST of Spg015176 vs. ExPASy Swiss-Prot
Match: F4JRF4 (Adenine DNA glycosylase OS=Arabidopsis thaliana OX=3702 GN=MYH PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 79/169 (46.75%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 3   DGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSERE----AVDIEDIMFSIDKVPTIR 62
           + E+ E  E  + + D  + ++ ++E + +    +E E      DIED +FS ++   IR
Sbjct: 74  EAEEEEKAEEAEAEADKEEAEEESEEEEEEEEEEAEAEEEALGGDIED-LFSENETQKIR 133

Query: 63  ASLLDWYDRSRRDLPWRS-LDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPT 122
             LLDWYD ++RDLPWR+   + + E RAY VWVSE+MLQQTRVQTV+++Y RWM KWPT
Sbjct: 134 MGLLDWYDVNKRDLPWRNRRSESEKERRAYEVWVSEIMLQQTRVQTVMKYYKRWMQKWPT 193

Query: 123 VQHLSRASLE-------------------EVNEMWAGLGYYRRARFLLE 148
           +  L +ASLE                   EVNEMWAGLGYYRRARFLLE
Sbjct: 194 IYDLGQASLENLIVSRSRELSFLRGNEKKEVNEMWAGLGYYRRARFLLE 241

[Close]

BLAST of Spg015176 vs. ExPASy Swiss-Prot
Match: Q99P21 (Adenine DNA glycosylase OS=Mus musculus OX=10090 GN=Mutyh PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 8.9e-29
Identity = 60/119 (50.42%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 31  RQGRSPSEREAVDIEDIMFSIDKVPTIRASLLDWYDRSRRDLPWRSL--DKGQPETRAYG 90
           +Q R    + +V    +   +  V   R++LL WYD+ +RDLPWR+L  ++   + RAY 
Sbjct: 41  KQKREELLQASVSPYHLFSDVADVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYA 100

Query: 91  VWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQHLSRASLEEVNEMWAGLGYYRRARFLLE 148
           VWVSEVMLQQT+V TV+ +Y RWM KWP +Q L+ ASLEEVN++W+GLGYY R R L E
Sbjct: 101 VWVSEVMLQQTQVATVIDYYTRWMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQE 159

[Close]

BLAST of Spg015176 vs. ExPASy Swiss-Prot
Match: Q9UIF7 (Adenine DNA glycosylase OS=Homo sapiens OX=9606 GN=MUTYH PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 63/119 (52.94%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 34  RSPSE---REAVDIEDIMFSIDKVPTIRASLLDWYDRSRRDLPW--RSLDKGQPETRAYG 93
           R P E   + +V    +   + +V   R SLL WYD+ +RDLPW  R+ D+   + RAY 
Sbjct: 67  RQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYA 126

Query: 94  VWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQHLSRASLEEVNEMWAGLGYYRRARFLLE 148
           VWVSEVMLQQT+V TV+ +Y  WM KWPT+Q L+ ASLEEVN++WAGLGYY R R L E
Sbjct: 127 VWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQE 185

[Close]

BLAST of Spg015176 vs. ExPASy Swiss-Prot
Match: Q8R5G2 (Adenine DNA glycosylase OS=Rattus norvegicus OX=10116 GN=Mutyh PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-28
Identity = 62/119 (52.10%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 31  RQGRSPSEREAVDIEDIMFSIDKVPTIRASLLDWYDRSRRDLPWRSLDKGQP--ETRAYG 90
           +Q R    +  V    +   I  V   R +LL WYD+ +RDLPWR   K +   + RAY 
Sbjct: 41  KQKREELLKTPVSPYHLFSDIADVTAFRRNLLSWYDQEKRDLPWRKRVKEETNLDRRAYA 100

Query: 91  VWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQHLSRASLEEVNEMWAGLGYYRRARFLLE 148
           VWVSEVMLQQT+V TV+ +Y RWM KWPT+Q L+ ASLEEVN++W+GLGYY R R L E
Sbjct: 101 VWVSEVMLQQTQVATVIDYYTRWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQE 159

[Close]

BLAST of Spg015176 vs. ExPASy Swiss-Prot
Match: P17802 (Adenine DNA glycosylase OS=Escherichia coli (strain K12) OX=83333 GN=mutY PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 59  ASLLDWYDR-SRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPT 118
           A +LDWYD+  R+ LPW      Q +   Y VW+SEVMLQQT+V TV+ ++ R+M ++PT
Sbjct: 8   AQVLDWYDKYGRKTLPW------QIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPT 67

Query: 119 VQHLSRASLEEVNEMWAGLGYYRRARFL 146
           V  L+ A L+EV  +W GLGYY RAR L
Sbjct: 68  VTDLANAPLDEVLHLWTGLGYYARARNL 89

[Close]

BLAST of Spg015176 vs. ExPASy TrEMBL
Match: A0A0A0KC27 (Adenine DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_6G088720 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.8e-68
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNENDEY+K+ TDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 55  MSDGEKNENDEYMKKNTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 114

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 115 SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 174

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 175 HLSRASLEEVNEMWAGLGYYRRARFLFE 202

[Close]

BLAST of Spg015176 vs. ExPASy TrEMBL
Match: A0A5D3DMU5 (Adenine DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001760 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNEN+E VK+KTDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENEENVKKKTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFE 148

[Close]

BLAST of Spg015176 vs. ExPASy TrEMBL
Match: A0A5A7T8X3 (Adenine DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001490 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNEN+E VK+KTDFR++KKPT ERKR+GRSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENEENVKKKTDFRRKKKPTTERKRRGRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFE 148

[Close]

BLAST of Spg015176 vs. ExPASy TrEMBL
Match: A0A1S3CBT2 (Adenine DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103498904 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.3e-66
Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNEN+E VK+KTDFR++KKPT +RKR+ RSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENEENVKKKTDFRRKKKPTTKRKRRSRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFE 148

[Close]

BLAST of Spg015176 vs. ExPASy TrEMBL
Match: E5GB45 (Adenine DNA glycosylase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.3e-66
Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 0


Query: 1   MSDGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSEREA-VDIEDIMFSIDKVPTIRA 60
           MSDGEKNEN+E VK+KTDFR++KKPT +RKR+ RSPS+ EA VDIEDIMFSID V TIRA
Sbjct: 1   MSDGEKNENEENVKKKTDFRRKKKPTTKRKRRSRSPSKSEAVVDIEDIMFSIDNVQTIRA 60

Query: 61  SLLDWYDRSRRDLPWRSLDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPTVQ 120
           SLLDWYDRSRRDLPWRSLDKG+PETRAYGVWVSE+MLQQTRVQTVVQFYNRWM KWPTVQ
Sbjct: 61  SLLDWYDRSRRDLPWRSLDKGEPETRAYGVWVSEIMLQQTRVQTVVQFYNRWMLKWPTVQ 120

Query: 121 HLSRASLEEVNEMWAGLGYYRRARFLLE 148
           HLSRASLEEVNEMWAGLGYYRRARFL E
Sbjct: 121 HLSRASLEEVNEMWAGLGYYRRARFLFE 148

[Close]

BLAST of Spg015176 vs. TAIR 10
Match: AT4G12740.1 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 137.9 bits (346), Expect = 8.0e-33
Identity = 79/169 (46.75%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 3   DGEKNENDEYVKQKTDFRQRKKPTKERKRQGRSPSERE----AVDIEDIMFSIDKVPTIR 62
           + E+ E  E  + + D  + ++ ++E + +    +E E      DIED +FS ++   IR
Sbjct: 74  EAEEEEKAEEAEAEADKEEAEEESEEEEEEEEEEAEAEEEALGGDIED-LFSENETQKIR 133

Query: 63  ASLLDWYDRSRRDLPWRS-LDKGQPETRAYGVWVSEVMLQQTRVQTVVQFYNRWMHKWPT 122
             LLDWYD ++RDLPWR+   + + E RAY VWVSE+MLQQTRVQTV+++Y RWM KWPT
Sbjct: 134 MGLLDWYDVNKRDLPWRNRRSESEKERRAYEVWVSEIMLQQTRVQTVMKYYKRWMQKWPT 193

Query: 123 VQHLSRASLE-------------------EVNEMWAGLGYYRRARFLLE 148
           +  L +ASLE                   EVNEMWAGLGYYRRARFLLE
Sbjct: 194 IYDLGQASLENLIVSRSRELSFLRGNEKKEVNEMWAGLGYYRRARFLLE 241

The following BLAST results are available for this feature:

BLAST of Spg015176 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743606.1	5.5e-68	88.67	adenine DNA glycosylase isoform X3 [Cucumis sativus]	[more]
XP_004140565.2	1.6e-67	89.19	adenine DNA glycosylase isoform X1 [Cucumis sativus] >XP_031743604.1 adenine DNA...	[more]
KGN46403.2	1.6e-67	89.19	hypothetical protein Csa_005328 [Cucumis sativus]	[more]
XP_031743608.1	1.6e-67	89.19	adenine DNA glycosylase isoform X5 [Cucumis sativus]	[more]
TYK24629.1	6.1e-67	89.19	adenine DNA glycosylase isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Spg015176 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JRF4	1.1e-31	46.75	Adenine DNA glycosylase OS=Arabidopsis thaliana OX=3702 GN=MYH PE=3 SV=1	[more]
Q99P21	8.9e-29	50.42	Adenine DNA glycosylase OS=Mus musculus OX=10090 GN=Mutyh PE=1 SV=2	[more]
Q9UIF7	1.5e-28	52.94	Adenine DNA glycosylase OS=Homo sapiens OX=9606 GN=MUTYH PE=1 SV=1	[more]
Q8R5G2	2.6e-28	52.10	Adenine DNA glycosylase OS=Rattus norvegicus OX=10116 GN=Mutyh PE=2 SV=1	[more]
P17802	1.6e-17	51.14	Adenine DNA glycosylase OS=Escherichia coli (strain K12) OX=83333 GN=mutY PE=1 S...	[more]

BLAST of Spg015176 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC27	7.8e-68	89.19	Adenine DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_6G088720 PE=3 SV=1	[more]
A0A5D3DMU5	2.9e-67	89.19	Adenine DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T8X3	2.9e-67	89.19	Adenine DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CBT2	4.3e-66	87.84	Adenine DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103498904 PE=3 SV=1	[more]
E5GB45	4.3e-66	87.84	Adenine DNA glycosylase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of Spg015176 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12740.1	8.0e-33	46.75	HhH-GPD base excision DNA repair family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 71..169 e-value: 2.2E-27 score: 97.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 91..147 e-value: 5.3E-11 score: 42.9
IPR003265	HhH-GPD domain	CDD	cd00056	ENDO3c	coord: 87..148 e-value: 1.6132E-18 score: 76.1262
IPR044298	Adenine/Thymine-DNA glycosylase	PANTHER	PTHR42944	ADENINE DNA GLYCOSYLASE	coord: 22..149
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 54..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015176.1	Spg015176.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006284	base-excision repair
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000701	purine-specific mismatch base pair DNA N-glycosylase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds