Spg015129 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg015129
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold3: 46685606 .. 46688430 (+)
RNA-Seq ExpressionSpg015129
SyntenySpg015129
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTGTTCCGCAGTTGATGCAAAGGAGAGAACGTGCGACATTAGGCACGATAGTCGCCTCTCCCGCGTCAAAAGGAGATCAGATTGGTCGCCATATCATTGTACAAGTACCCAAACCCCGAAACATCACTCAGCAAAATCCGAAGCCGATCACAGAAAAACATGGCCGAGGAAGGGAAGGCGGACCAGCAACTCTTCCAGCTTCTTGCCAGTCTTCTCCACCAGGTCACAATTTCGCACCACTTTCCGTTTCCATTTTCAATCTTTAATTCGATTGCTATGATGCTTTTCTGATTGTCTTCGTGACTGGATAGCTGTTTACGAATTGGAATTGGTTAATTTTTCATCTAGGTATTGTCCATGTTTTTTTTTTGTTAGAACAAGTTAGATTGATTGTGTTTTCTAGATGTTGGTATATCATCAGGATCGAGCTCGGTGGAACTTGCTTGCTTGATGACCGATGTTCCGTTGCTTCAAAACTTTATTCTCTACTAATTATTTTGGGAATTTGTGATTTAAAGAGAAATAGGTGTTGGGGGTTCCGTGACGGTGAATTTTGGGGCTATAGTGTTTGCTGTTATGCTTTATTGATTAAACCTTTTCTCGTGTCTTTAACTTTATTCGAACATTGATCCTTGAGTGCTCGGTAGTTGAAGAAAGGTTTGATCGTGCTTTTATTGGGCACTGTGTGTAGCTAAATTGTCGTGAGCGTGTAGAATTTTGTGTATACTCAAGAAACATAGTAGAAGGTAATGGATATTTCAATCATTTATAAATGGAATTGAGAATTGTTGCAGTTGGAGATAATGGTCTCTCTGTAAAAGGTGGCAAAAAAAGAAGATTTTTACTATGCAATTGGTTATTGGTGTACGCACTGCCCTGGTATGAACTTCGACTCAGTGTTAGGAAGTATACATTTAAAAGAACCATAGTGATCCTGAGCTAGGTCTTTTCCAACCAAACTTTCACTTACCACTCATGTTCTGTGTCAATTGTCATGTTCACATATCATGTATTCTTTTGTGTTTCACCTACCAAACTCCCTACAATACTTATATTGGTAAAGCCTCCTAGCTAGGGTGATAAGTAACCAACATCTCTCAATTTACACGTCTTGATTTCTTTTCCTAAACTGTCTCGAATTTGATTTTGAACAATATTGACATGGGGTTGGGTCTAGGCAAAGTCTTACTTTGTATTCTCATATTCACACTACATTTACATTATTATGCATCCAACCTCATTCATGGGATTCCAAATCTCTGAGTTTGGATTCTTGTTGTGGTGACTATTTTATTTATACGATCCAGTCTTTATTCCCCTCAATGACACAACAGTTTCCCTTGTTTTGAATCAAGATATTCTCTCTATTGTAATAGGAAAATGTAACTTGGTGCCTGTCCTTCAACGGATTGTATTTTATCCAACATTCGAACAGATTTCACATCCATTGGAAATTACCAAGGATAGTGGAGCATTGATTATAGAAAGGAAAATGATAATTTTTTTATGGGACTCAAGTGAAGAGGAGCGTTGAGCCATCTTGTTAACTAGAACATTGTAGTTGTAAAATAGAGTTTGGAAGGGCTTGGAATAGGTAACTTAGGGCTAGGGGAGAGGAATATACTCTCTTGATAAAATGGCTATGGAGATCCCATCCAACGATTAAAGAACTCTAGAATAAAGTAATTATGAGCTACTACAGGAATCAGGAAGGGGTTGGTTGGCCAAATAGAAAACAGTGGGAAGCAATTGTAACCCTTGGAACATATCTAAGCTAATAGAGCAGTTTTCTGCAATTAAAGTGGCCAAGGCGGGATATTCGTTCTTTTGGAACAATTGTTGGGTTGGGATCGGCCTCTCTGTTAAAGGTTTTTAAGACTAATAAGGAGTATAACAATCCAATGAGCATGGGGGAGAATTCTAGTTCTTGGAAGGAAGGTCCTTGCTAGAATTGTTTTTACCAATTTTGGGGTTACGAGGAGGTGAGAGAGATTCAGAGGGAGGACAATCAATTTCTCCCATATTGAATTAGCCATCAAAGTTTGTTTCCCTCAAAAAAAAAATTAGCCATCAAAGACTCAATCACGCTACTATTCCTAGGAACATAAGGATGCGAACACACTGGTTCTGCTATCACTCAGACATGATGTGCAACCTGGGCTACCATGTAATTTCATTAATCTTTAGTACCCTCCTGTGCTTTCATCTCAGCTTCTAGCTTCACAGATTGATTTGTTGAAATCTCAACCAGTGAAGAAATTTGCAAAAATAAAGCTCGCTACCTCTTTTAGGAAGAAAAACTTGTAAAACTATCTTAGTATTAAGATTCATTGAAAAGACAAGCCTTTGTCCAGACAATCCACAACCTACCAACTTACGATAGACTCGAGAGCAATTACTTATAAGATACGTAGTTATTGATGGCAAACTTCAAGTCATTGGTTGAACTGATGAGGATGAGTTTGAATGTAGGATAGGGCAGGGTCATCATATTGTGAAGGGCAATTGGTTAATGATACTTGATGGAAAAAGGAAACTTCAAGTGCAAAAGGGCATGAATCAAAATCATACTTTGAACAAGAATTTACAATGGTGTTGGAGAGATTCCTCATAGACATTGGATCATACTTGAGGCAGTTGGCGTTTCACTCCATGAGCAGGTGGATTGATATATCTAAGAGGCAATGCATAATTTTGGTTTTAATCGTGATACTAGGTGAGCATGCTGAAGGAGGAATTTTGAAAGCTATTTCTTCCATTGAAGGCAAGTTGAACTGCCATGGAAGCAGTGAAAAGTCTGAGAAGCAGTCAGGCTATACCTAG

mRNA sequence

ATGCAAAGGAGAGAACGTGCGACATTAGGCACGATAGTCGCCTCTCCCGCGTCAAAAGGAGATCAGATTGGTCGCCATATCATTGTACAAGTACCCAAACCCCGAAACATCACTCAGCAAAATCCGAAGCCGATCACAGAAAAACATGGCCGAGGAAGGGAAGGCGGACCAGCAACTCTTCCAGCTTCTTGCCAGTCTTCTCCACCAGCTGTTTACGAATTGGAATTGCTAATAGAGCAGTTTTCTGCAATTAAAGTGGCCAAGGCGGGATATTCGTTCTTTTGGAACAATTGTTGGGTTGGGATCGGCCTCTCTGTTAAAGGTGAGCATGCTGAAGGAGGAATTTTGAAAGCTATTTCTTCCATTGAAGGCAAGTTGAACTGCCATGGAAGCAGTGAAAAGTCTGAGAAGCAGTCAGGCTATACCTAG

Coding sequence (CDS)

ATGCAAAGGAGAGAACGTGCGACATTAGGCACGATAGTCGCCTCTCCCGCGTCAAAAGGAGATCAGATTGGTCGCCATATCATTGTACAAGTACCCAAACCCCGAAACATCACTCAGCAAAATCCGAAGCCGATCACAGAAAAACATGGCCGAGGAAGGGAAGGCGGACCAGCAACTCTTCCAGCTTCTTGCCAGTCTTCTCCACCAGCTGTTTACGAATTGGAATTGCTAATAGAGCAGTTTTCTGCAATTAAAGTGGCCAAGGCGGGATATTCGTTCTTTTGGAACAATTGTTGGGTTGGGATCGGCCTCTCTGTTAAAGGTGAGCATGCTGAAGGAGGAATTTTGAAAGCTATTTCTTCCATTGAAGGCAAGTTGAACTGCCATGGAAGCAGTGAAAAGTCTGAGAAGCAGTCAGGCTATACCTAG

Protein sequence

MQRRERATLGTIVASPASKGDQIGRHIIVQVPKPRNITQQNPKPITEKHGRGREGGPATLPASCQSSPPAVYELELLIEQFSAIKVAKAGYSFFWNNCWVGIGLSVKGEHAEGGILKAISSIEGKLNCHGSSEKSEKQSGYT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg015129.1Spg015129.1mRNA