Spg015097 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015097
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	light-regulated protein-like
Location	scaffold3: 41516869 .. 41517915 (+)
RNA-Seq Expression	Spg015097
Synteny	Spg015097

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGAATCAAAATATGTCTATGGATTAACTTCAAGAATGTTCTTGATATGAGAGAAACCAAAAAATCATAGATAAAGAGACAAAAATTCAACAATAATACATCCATTCAAACCTTCACAACCACTCGTTTCTTTTATTTCCTAAAGTAGCTTTCACCTCTACATTATTGGACCAAAACCTTATCCAGTCACAAGATATCTTGCCATCTTTATCTGTTTAACCTTATAAATCTGAATCCCACTCTAAAGATGAATCCAAGCAACAACTTCGCAGCAGATTGAACCAGTCTTCATCATGCAGTTGCAGGCAGCTCTTTCCCTAGCACCTCCATCATCATGCTTCCTCTTCCCACCAACCACTAAATCAATAGCCTTTCCAATCCGAACTAGGTCCCTGCGAAGGCACCCCACTTCTCACACTCAACGTCCCACCCTAAAAGCTAAGGCAAGTGCGGTTGGACAAGACCCTTCAACCGTTGACTACAGCTCCATCTCCTCGTAAGCCAAATCATTTAGTTTGTCATTGCTTCCGTACAATATGTCTGATTCAATACCCTTCATCTGCTCTTCTGTGTCTGTTTTTTGCAGTGTTTTCCCAGCAGAGGCTTGTGACACTGTTGGAGGGGAAGCTTGTGATGTTGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCCAAGAAGGGGGGAAGTGTTTCAGAGCCTGTTGATAGAGAGTATCTGCAATATGACAGTCCCAAGACGTAAGATCTCAACACAACAACCATTTGCACTTTCATCCTCTACTCTACTGATTCATTTCCTATGAAACAACACTATTTCATACTTCTTGATTTTTTAATGATTGCTGCAGAGTTTTTCCAGCGGAGGCTTGTGATGATCTCGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAGAAAATCTTATTGGGAACTAGGACTTATAAACAAGAGTTGGGCCCAGAGTCACCTTTCAGCTGTTTTCTTTTCTTTTCTTTTTTTCCCCCTTTGTTGACTTTCTCATGCTTGTAAATGATAA

mRNA sequence

ATGCAGTTGCAGGCAGCTCTTTCCCTAGCACCTCCATCATCATGCTTCCTCTTCCCACCAACCACTAAATCAATAGCCTTTCCAATCCGAACTAGGTCCCTGCGAAGGCACCCCACTTCTCACACTCAACGTCCCACCCTAAAAGCTAAGGCAAGTGCGGTTGGACAAGACCCTTCAACCGTTGACTACAGCTCCATCTCCTCTGTTTTCCCAGCAGAGGCTTGTGACACTGTTGGAGGGGAAGCTTGTGATGTTGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCCAAGAAGGGGGGAAGTGTTTCAGAGCCTGTTGATAGAGAGTATCTGCAATATGACAGTCCCAAGACAGTTTTTCCAGCGGAGGCTTGTGATGATCTCGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAG

Coding sequence (CDS)

ATGCAGTTGCAGGCAGCTCTTTCCCTAGCACCTCCATCATCATGCTTCCTCTTCCCACCAACCACTAAATCAATAGCCTTTCCAATCCGAACTAGGTCCCTGCGAAGGCACCCCACTTCTCACACTCAACGTCCCACCCTAAAAGCTAAGGCAAGTGCGGTTGGACAAGACCCTTCAACCGTTGACTACAGCTCCATCTCCTCTGTTTTCCCAGCAGAGGCTTGTGACACTGTTGGAGGGGAAGCTTGTGATGTTGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCCAAGAAGGGGGGAAGTGTTTCAGAGCCTGTTGATAGAGAGTATCTGCAATATGACAGTCCCAAGACAGTTTTTCCAGCGGAGGCTTGTGATGATCTCGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAG

Protein sequence

MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY

Homology

[Close]

BLAST of Spg015097 vs. NCBI nr
Match: XP_038906788.1 (light-regulated protein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65
Identity = 128/143 (89.51%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAALS+A PSSC L PPT KS+AF +R+RS+ RHPTS TQRP LKAKASAVGQDPST
Sbjct: 1   MQLQAALSVATPSSCSLLPPTAKSMAFSVRSRSIGRHPTSQTQRPILKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKK GSV+EPVDREYLQYDSPKTV
Sbjct: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKQGSVTEPVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Spg015097 vs. NCBI nr
Match: XP_022991991.1 (light-regulated protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 1.0e-64
Identity = 126/143 (88.11%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAA SLA PSSC+L PPTTK +AF + +RS+RRHPTS T RP LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSVPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKGGSVSE VDREYLQYDSPKTV
Sbjct: 61  VDYSSVSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Spg015097 vs. NCBI nr
Match: XP_022953556.1 (light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64
Identity = 127/143 (88.81%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAA SLA PSSC+L PPTTK +AF I +RS+RRHPTS T RP LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKGGSVSE VDREYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Spg015097 vs. NCBI nr
Match: XP_023547464.1 (light-regulated protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64
Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAA SLA PSSC+L PPTTK +AF I +RS RRHPTS T RP LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSKRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKGGSVSE VDREYLQYDSPKTV
Sbjct: 61  VDYSSVSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Spg015097 vs. NCBI nr
Match: KAG6576101.1 (Light-regulated protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAA SLA PSSC+L PPTTK +AF I +RS+RRHPTS T RP LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAK GGSVSE VDREYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACETVGGEACDVEMYPEVKLKPEAKMGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPE 138
           FPAEACDDLGGEFCDP+
Sbjct: 121 FPAEACDDLGGEFCDPD 137

[Close]

BLAST of Spg015097 vs. ExPASy Swiss-Prot
Match: Q96500 (Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.7e-27
Identity = 68/134 (50.75%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 8   SLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPSTVDY-SSI 67
           S++ P   FL P  TK+     R  SLR + +S          +S++  DP+TVDY SSI
Sbjct: 18  SVSSPKLTFLLPHATKA----SRLSSLRSNNSS---------SSSSLTSDPNTVDYNSSI 77

Query: 68  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTVFPAEAC 127
            SVFPAEAC+ + G AC  ++YPEVKL  +       SEPVDREY +Y+SPKTVF  EAC
Sbjct: 78  LSVFPAEACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEEYNSPKTVFREEAC 137

Query: 128 DDLGGEFCDPEYQK 141
           DDLGGEFC+P++QK
Sbjct: 138 DDLGGEFCEPDFQK 138

[Close]

BLAST of Spg015097 vs. ExPASy Swiss-Prot
Match: Q03200 (Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.9e-24
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 47  LKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGS--VS 106
           ++A A+AV  + + VDYSS  SVFP EACD +GGEAC+V+MYPE KL   A    S   +
Sbjct: 36  VRAAAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAA 95

Query: 107 EPVDREYLQYDSPKTVFPAEACDDLGGEFC 135
           E VDR+YL YD P TVFP EACDDLGGEFC
Sbjct: 96  EEVDRDYLSYDEPTTVFPEEACDDLGGEFC 125

[Close]

BLAST of Spg015097 vs. ExPASy TrEMBL
Match: A0A6J1JSC1 (light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488476 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.9e-65
Identity = 126/143 (88.11%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAA SLA PSSC+L PPTTK +AF + +RS+RRHPTS T RP LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSVPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKGGSVSE VDREYLQYDSPKTV
Sbjct: 61  VDYSSVSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Spg015097 vs. ExPASy TrEMBL
Match: A0A6J1GNA5 (light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 127/143 (88.81%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAA SLA PSSC+L PPTTK +AF I +RS+RRHPTS T RP LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKGGSVSE VDREYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Spg015097 vs. ExPASy TrEMBL
Match: A0A5D3DLY7 (Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001960 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 119/143 (83.22%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAALS+APP SC L PPT K +AF I+TRSL R       + TLKAKASAVGQ+PST
Sbjct: 1   MQLQAALSIAPP-SCSLLPPTAKLMAFSIQTRSLPRQ-----SKGTLKAKASAVGQEPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG SV+EPV+REYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Spg015097 vs. ExPASy TrEMBL
Match: A0A1S3CBQ8 (light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57
Identity = 119/143 (83.22%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQLQAALS+APP SC L PPT K +AF I+TRSL R       + TLKAKASAVGQ+PST
Sbjct: 1   MQLQAALSIAPP-SCSLLPPTAKLMAFSIQTRSLPRQ-----SQGTLKAKASAVGQEPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG SV+EPV+REYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Spg015097 vs. ExPASy TrEMBL
Match: Q39636 (CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 8.4e-57
Identity = 118/143 (82.52%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 1   MQLQAALSLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPST 60
           MQ QAALS+A P SC L PPT KS+AF I TRS+ R       + TLKAKASAVGQDPST
Sbjct: 1   MQFQAALSIASP-SCSLLPPTAKSMAFSIPTRSMPRQ-----SKGTLKAKASAVGQDPST 60

Query: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTV 120
           VDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG SV+EPV+REYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 144
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Spg015097 vs. TAIR 10
Match: AT3G26740.1 (CCR-like )

HSP 1 Score: 121.7 bits (304), Expect = 4.8e-28
Identity = 68/134 (50.75%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 8   SLAPPSSCFLFPPTTKSIAFPIRTRSLRRHPTSHTQRPTLKAKASAVGQDPSTVDY-SSI 67
           S++ P   FL P  TK+     R  SLR + +S          +S++  DP+TVDY SSI
Sbjct: 18  SVSSPKLTFLLPHATKA----SRLSSLRSNNSS---------SSSSLTSDPNTVDYNSSI 77

Query: 68  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDREYLQYDSPKTVFPAEAC 127
            SVFPAEAC+ + G AC  ++YPEVKL  +       SEPVDREY +Y+SPKTVF  EAC
Sbjct: 78  LSVFPAEACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEEYNSPKTVFREEAC 137

Query: 128 DDLGGEFCDPEYQK 141
           DDLGGEFC+P++QK
Sbjct: 138 DDLGGEFCEPDFQK 138

The following BLAST results are available for this feature:

BLAST of Spg015097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906788.1	1.2e-65	89.51	light-regulated protein, chloroplastic-like [Benincasa hispida]	[more]
XP_022991991.1	1.0e-64	88.11	light-regulated protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_022953556.1	1.3e-64	88.81	light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated ...	[more]
XP_023547464.1	2.3e-64	88.81	light-regulated protein, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576101.1	2.2e-59	86.86	Light-regulated protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Spg015097 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96500	6.7e-27	50.75	Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1...	[more]
Q03200	6.9e-24	61.11	Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Spg015097 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSC1	4.9e-65	88.11	light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GNA5	6.4e-65	88.81	light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 ...	[more]
A0A5D3DLY7	1.3e-57	83.22	Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CBQ8	1.7e-57	83.22	light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1	[more]
Q39636	8.4e-57	82.52	CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1	[more]

BLAST of Spg015097 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26740.1	4.8e-28	50.75	CCR-like	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009856	Light regulated Lir1	PFAM	PF07207	Lir1	coord: 3..135 e-value: 8.0E-47 score: 158.8
IPR009856	Light regulated Lir1	PANTHER	PTHR36762	LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC	coord: 3..142
None	No IPR available	PANTHER	PTHR36762:SF4	LIGHT-REGULATED PROTEIN-LIKE	coord: 3..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015097.1	Spg015097.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast